Pregenerated sensors for UGT2B34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029260Ensembl transcript IDs: ENSMUST00000031181.16, ENSMUST00000113333.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATGGAATATGGGTTCTCTAGAAGAAGAGTTAGTTAGTAACTGCTaGGCCATCTCCCCAGCCCCAAGTCCAATATTCGTAGTTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EWNMGSLEEELVSNC*AISPAPSPIFVVPL Trigger: TAAAGGAACTACGAATATTGGACTTGGGGCTGGGGAGATGGCTCAGCAGTTACTAACTAACTCTTCTTCTAGAGAACCCATATTCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR TCA 90 bp | TTTTCAGTACAGAATATGTTCAGGAGGCGTTCTAAGCACTGCAAATaGGGTGGTTCATTGTCATTTGAAGATGATTGCATTGATGACCTT | + |
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Preference number: 1 (lower is better) Translates to: FSVQNMFRRRSKHCK*GGSLSFEDDCIDDL Trigger: AAGGTCATCAATGCAATCATCTTCAAATGACAATGAACCACCTCATTTGCAGTGCTTAGAACGCCTCCTGAACATATTCTGTACTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR GCA 90 bp | AAGTCCAATATTCGTAGTTCCTTTAAGGAAGAGGTCATTGCTTATTaGTTATTGCACCACATGAGAGTCTGCAAAAGTACAAGTGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: KSNIRSSFKEEVIAY*LLHHMRVCKSTSVL Trigger: TAGAACACTTGTACTTTTGCAGACTCTCATGTGGTGCAATAAGCAATAAGCAATGACCTCTTCCTTAAAGGAACTACGAATATTGGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR TCA 90 bp | AGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACTATaGGTTATAAGTGGTGTGTTGTCTATATGTGTGTGTGTGTTTATA | + |
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Preference number: 1 (lower is better) Translates to: RNCGLLTHGISANKL*VISGVLSICVCVFI Trigger: TATAAACACACACACACATATAGACAACACACCACTTATAACTCATAGTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAGGCCAGAAGATTAGTTAGTAACTGCTaGGCCATCTCCCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: CMQASFACVSAVPREARRLVSNC*AISPAP Trigger: TGGGGCTGGGGAGATGGCTCAGCAGTTACTAACTAA...TCTTCTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAGGCCAGAAGAATGCTTATGAATTTGTaGGTGGGTCTTACCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: CMQASFACVSAVPREARRMLMNL*VGLTYA Trigger: GGCATAGGTAAGACCCACTCACAAATTCATAAGCAT...TCTTCTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TCCACATTCTATGAGGCAGGCTATTTCTTGCTGAAGACCAGGCTAGTTGGCCTGAGGACCCTAAATCATTaGCTCCCTTTCTGTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: STFYEAGYFLLKTRLVGLRTLNH*LPFCDA Trigger: TGCATCACAGAAAGGGAGGCAATGATTTAGGGTCCT...CAGGCCAACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTCATAGAATGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAGGCCAGAAGAGTCTTACCTATGCCATaGCACAAATGTTCAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: CMQASFACVSAVPREARRVLPMP*HKCSDV Trigger: GACATCTGAACATTTGTGCCATGGCATAGGTAAGAC...TCTTCTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGAGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACCTTTGCATGTGTCTCTaGAGTACCAAGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FVSGSYLCHGTNVQMSKHLCMCL*STKRGQ Trigger: CTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAG...GTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACTCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCATGCAGGCTTCCTTTaGATGTGTCTCTGCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: SGSYLCHGTNVQMSKHSFHAGFL*MCLCST Trigger: GGTACTGCAGAGACACATGCAAAGGAAGCCTGCATG...AAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGCATGCAGGCTTCCTTTaGATGTGTCTCTGCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: CILCACRLPLHVSLQYQEHAGFL*MCLCST Trigger: GGTACTGCAGAGACACATGCAAAGGAAGCCTGCATG...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR CAA 90 bp | TTCAGTGTTAGTTTCCCTTCCACATTCTATGAGGCAGGCTATTTCTaGCTGAAGACCAGGCTAGTTGGCCTGAGAGCTTCAGGTAATTCT | + |
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Preference number: 2 (lower is better) Translates to: FSVSFPSTFYEAGYF*LKTRLVGLRASGNS Trigger: AGAATTACCTGAAGCTCTCAGGCCAACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTCATAGAATGTGGAAGGGAAACTAACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGATTGCCTCCCTTTCTGTaGTGCACTGGAAAGGACCAT | + |
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Preference number: 2 (lower is better) Translates to: LYFMCMQASFACVSAVPRLPPFL*CTGKDH Trigger: ATGGTCCTTTCCAGTGCATCACAGAAAGGGAGGCAA...TCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCTCCCCAGCCCCAAGTCCAATATTCGTAGTTCCTTTAAGGAAGAGGTCGAAACTGAAGAGAAATaGATGGAATGGAGCGATTTG | + |
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Preference number: 2 (lower is better) Translates to: SHLPSPKSNIRSSFKEEVETEEK*MEWSDL Trigger: CAAATCGCTCCATTCCATTCATTTCTCTTCAGTTTC...GACCTCTTCCTTAAAGGAACTACGAATATTGGACTTGGGGCTGGGGAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCATCTCCCCAGCCCCAAGTCCAATATTCGTAGTTCCTTTAAGGAAGAGGTCCACCACATGAGAGTCTaGAAAAGTACAAGTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SHLPSPKSNIRSSFKEEVHHMRV*KSTSVL Trigger: TAGAACACTTGTACTTTTGCAGACTCTCATGTGGTG...GACCTCTTCCTTAAAGGAACTACGAATATTGGACTTGGGGCTGGGGAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGATGCACTGGAAAGGACCATGTGTCAGTCTTCCCCAGTTCAGCTACTCCCCTCATTTGAAGATGATTaGATTGATGACCTTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: CDALERTMCQSSPVQLLPSFEDD*IDDLEM Trigger: CATCTCAAGGTCATCAATGCAATCATCTTCAAATGA...GGGGAGTAGCTGAACTGGGGAAGACTGACACATGGTCCTTTCCAGTGCATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGTCAAGGAGGAAGTCTTaGCTGACAAATAGTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: CILCACRLPLHVSLQYQESRRKS*LTNSCT Trigger: GGTGCAACTATTTGTCAGGCAAGACTTCCTCCTTGA...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACCATGTGTCAGTCTTCCCCAGTTCAGCTACTCCCCTTTCTTCTTCCTTTGTATTTTATGTGCATaGAGGCTTCCTTTGCATGTG | + |
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Preference number: 2 (lower is better) Translates to: KGPCVSLPQFSYSPFFFLCILCA*RLPLHV Trigger: CACATGCAAAGGAAGCCTGCATGCACATAAAATACA...AAGGAAGAAGAAAGGGGAGTAGCTGAACTGGGGAAGACTGACACATGGTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACTTGCCTCCCTTTCTGTaGTGCACTGGAAAGGACCAT | + |
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Preference number: 2 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNLPPFL*CTGKDH Trigger: ATGGTCCTTTCCAGTGCATCACAGAAAGGGAGGCAA...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGAGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACATGCTTATGAATTTGTaGGTGGGTCTTACCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: FVSGSYLCHGTNVQMSKHMLMNL*VGLTYA Trigger: GGCATAGGTAAGACCCACTCACAAATTCATAAGCAT...GTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACTCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGTACAAGTGTTCTAAAGACAAATGTAGGGTTACAGGTTTCACACTGCTCCCTTTGCATGTGTCTCTaGAGTACCAAGAGAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KSTSVLKTNVGLQVSHCSLCMCL*STKRGQ Trigger: CTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAG...GGAGCAGTGTGAAACCTGTAACCCTACATTTGTCTTTAGAACACTTGTACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAACCAACCACTGGTAACTaGTGTCTAGGAAGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RFHTAPILNMLPRYSSCKPTTGN*CLGRRE Trigger: CTCTCTCCTTCCTAGACACCAGTTACCAGTGGTTGG...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAATGCCTGACAAATAGTTaGACCATGGAGCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RFHTAPILNMLPRYSSCKCLTNS*TMEPAL Trigger: AAGAGCTGGCTCCATGGTGCAACTATTTGTCAGGCA...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | GGATTTGATTGGTGTTTGCTTGAATGTTTGGATGTTGGATGGCATTTTCAAAGGTGCCTGACAAATAGTTaGACCATGGAGCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GFDWCLLECLDVGWHFQRCLTNS*TMEPAL Trigger: AAGAGCTGGCTCCATGGTGCAACTATTTGTCAGGCA...CCTTTGAAAATGCCATCCAACATCCAAACATTCAAGCAAACACCAATCAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGAGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACTACATACACACATCCTaGACTTGTGTGAGAATAACT | + |
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Preference number: 2 (lower is better) Translates to: FVSGSYLCHGTNVQMSKHYIHTS*TCVRIT Trigger: AGTTATTCTCACACAAGTGCAGGATGTGTGTATGTA...GTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACTCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACGGACATTGGAAGGGGTaGCTTTCAGCATTGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNGHWKG*LSALIK Trigger: TTTAATCAATGCTGAAAGTCACCCCTTCCAATGTCC...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAAGTCTTACCTATGCCATaGCACAAATGTTCAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: RFHTAPILNMLPRYSSCKVLPMP*HKCSDV Trigger: GACATCTGAACATTTGTGCCATGGCATAGGTAAGAC...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTTGTTTGGATGTTGGATaGCATTTTCAAAGGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: SGSYLCHGTNVQMSKHSFCLDVG*HFQRNS Trigger: AGAATTCCTTTGAAAATGCCATCCAACATCCAAACA...AAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGCACCATGGAGCCAGCTCTTCAGATGTAACATTCTTTGGTTTAACTTTGATGTTTGCGGTCTTAATTaGCACTTAAAGAGTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VAPWSQLFRCNILWFNFDVCGLN*HLKSFP Trigger: TGGAAAACTCTTTAAGTGTCAATTAAGACCGCAAAC...ATCAAAGTTAAACCAAAGAATGTTACATCTGAAGAGCTGGCTCCATGGTGCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAAGCTTGTTCAATACTTGCAAAACCATGTAGAAATTGTGGGCTTCTTACTAGGACCCTAAATCATTaGCTCCCTTTCTGTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: VKACSILAKPCRNCGLLTRTLNH*LPFCDA Trigger: TGCATCACAGAAAGGGAGGCAATGATTTAGGGTCCT...AGTAAGAAGCCCACAATTTCTACATGGTTTTGCAAGTATTGAACAAGCTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR CAA 90 bp | GTTTACACCATCAGACTAAAGATTAGAGGAAAGCTAGTATTACCTTaGAGAGAACCTATCTTGACTAGTAGTAATTTCACTAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: VYTIRLKIRGKLVLP*REPILTSSNFTKAQ Trigger: CTGTGCTTTAGTGAAATTACTACTAGTCAAGATAGGTTCTCTCAAAGGTAATACTAGCTTTCCTCTAATCTTTAGTCTGATGGTGTAAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGATGCACTGGAAAGGACCATGTGTCAGTCTTCCCCAGTTCAGCTACTCCCCGAGGCAGGCTATTTCTaGCTGAAGACCAGGCTAGTT | + |
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Preference number: 3 (lower is better) Translates to: CDALERTMCQSSPVQLLPEAGYF*LKTRLV Trigger: AACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTC...GGGGAGTAGCTGAACTGGGGAAGACTGACACATGGTCCTTTCCAGTGCATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCAGTGGAGGCAGGCTATTTCTaGCTGAAGACCAGGCTAGTT | + |
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Preference number: 3 (lower is better) Translates to: VLPMPWHKCSDVKAQLSVEAGYF*LKTRLV Trigger: AACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTC...CACTGAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR TCA 72 bp | ATGGGTTCTCTAGAAGAAGAGTTAGTTAGTAACTGCTaGGCCATCTCCCCAGCCCCAAGTCCAATATTCGTA | + |
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Preference number: 3 (lower is better) Translates to: MGSLEEELVSNC*AISPAPSPIFV Trigger: TACGAATATTGGACTTGGGGCTGGGGAGATGGCTCAGCAGTTACTAACTAACTCTTCTTCTAGAGAACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACGCATGCAGGCTTCCTTaGCATGTGTCTCTGCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNACRLP*HVSLQY Trigger: GTACTGCAGAGACACATGCAAAGGAAGCCTGCATGC...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR TCA 72 bp | TATGAGTTCCTCAAAAATCAAGGAGGAAGTCTTGCCTaGCAAATAGTTGCACCATGGAGCCAGCTCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: YEFLKNQGGSLA*QIVAPWSQLFR Trigger: TCTGAAGAGCTGGCTCCATGGTGCAACTATTTGTCAGGCAAGACTTCCTCCTTGATTTTTGAGGAACTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR GCA 72 bp | CCTTATGCTTATGAATTTGTGAGTGGGTCTTACCTATaGCATGGCACAAATGTTCAGATGTCAAAGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: PYAYEFVSGSYL*HGTNVQMSKHS Trigger: GCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACTCACAAATTCATAAGCATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAGGTGTGGTATGGATTaGATTGGTGTTTGCTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: CILCACRLPLHVSLQYQERCGMD*IGVCLN Trigger: ATTCAAGCAAACACCAATCAAATCCATACCACACCT...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR TCA 72 bp | CAGAATATGTTCAGGAGGCGTTCTAAGCACTGCAAATaGGGTGGTTCATTGTCATTTGAAGATGATTGCATT | + |
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Preference number: 3 (lower is better) Translates to: QNMFRRRSKHCK*GGSLSFEDDCI Trigger: AATGCAATCATCTTCAAATGACAATGAACCACCTCATTTGCAGTGCTTAGAACGCCTCCTGAACATATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | GGATTTGATTGGTGTTTGCTTGAATGTTTGGATGTTGGATGGCATTTTCAAAGGTTAAGGAAGAGGTCATaGCTTATTGCTTATTGCACC | + |
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Preference number: 3 (lower is better) Translates to: GFDWCLLECLDVGWHFQRLRKRS*LIAYCT Trigger: GGTGCAATAAGCAATAAGCAATGACCTCTTCCTTAA...CCTTTGAAAATGCCATCCAACATCCAAACATTCAAGCAAACACCAATCAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGTGTCTGTTTCACATCTCTTGGTTTTCTCATACTAGAGTTATAGACACTCCACAATGTTTCCTGTaGTTGTTTACACCATCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LMCLFHISWFSHTRVIDTPQCFL*LFTPSD Trigger: GTCTGATGGTGTAAACAACAACAGGAAACATTGTGG...AGTGTCTATAACTCTAGTATGAGAAAACCAAGAGATGTGAAACAGACACATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATGATAGTTTCAAGGATAGTATCATGAGACTCTATCAATTCAGTAGTAGACTCAAGGGCTTGAACTaGAATGGTATGAAAACATCG | + |
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Preference number: 3 (lower is better) Translates to: AHDSFKDSIMRLYQFSSRLKGLN*NGMKTS Trigger: CGATGTTTTCATACCATTCAAGTTCAAGCCCTTGAG...TCTACTACTGAATTGATAGAGTCTCATGATACTATCCTTGAAACTATCATGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
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| 3UTR TCA 72 bp | GGGCTTCTTACTCATGGTATATCCGCAAACAAACTATaGGTTATAAGTGGTGTGTTGTCTATATGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GLLTHGISANKL*VISGVLSICVC Trigger: ACACACACATATAGACAACACACCACTTATAACTCATAGTTTGTTTGCGGATATACCATGAGTAAGAAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR TCA 72 bp | AAATGTAGGGTTACAGGTTTCACACTGCTCCAATCCTaGACATGTTACCTAGATATTCATCCTGTAAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: KCRVTGFTLLQS*TCYLDIHPVKS Trigger: AGACTTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCTGTAACCCTACATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
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| 3UTR GCA 72 bp | ATTCGTAGTTCCTTTAAGGAAGAGGTCATTGCTTATTaGTTATTGCACCACATGAGAGTCTGCAAAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: IRSSFKEEVIAY*LLHHMRVCKST Trigger: TGTACTTTTGCAGACTCTCATGTGGTGCAATAAGCAATAAGCAATGACCTCTTCCTTAAAGGAACTACGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTACAAGTGTTCTAAAGACAAATGTAGGGTTACAGGTTTCACACTGCTCCGTGGTTCATTGTCATTaGAAGATGATTGCATTGATG | + |
|
Preference number: 3 (lower is better) Translates to: KSTSVLKTNVGLQVSHCSVVHCH*KMIALM Trigger: CATCAATGCAATCATCTTCAAATGACAATGAACCAC...GGAGCAGTGTGAAACCTGTAACCCTACATTTGTCTTTAGAACACTTGTACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | TCCACATTCTATGAGGCAGGCTATTTCTTGCTGAAGACCAGGCTAGTTGGCCTGAAGAAGCCACTCAGCTaGAGCAGGAGCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STFYEAGYFLLKTRLVGLKKPLS*SRSRSR Trigger: CCTGCTCCTGCTCCTGCTCCAGCTGAGTGGCTTCTT...CAGGCCAACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTCATAGAATGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | TGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAGGCCAGAAGACCACAGAACCTTCTGTaGAATCTGAGCAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CMQASFACVSAVPREARRPQNLL*NLSKAC Trigger: GCAGGCCTTGCTCAGATTCCACAGAAGGTTCTGTGG...TCTTCTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | TGTGATGCACTGGAAAGGACCATGTGTCAGTCTTCCCCAGTTCAGCTACTCCCCGAAGTATCCCCAAAATaGCTGCTTTGGCAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CDALERTMCQSSPVQLLPEVSPK*LLWQLI Trigger: TATGAGCTGCCAAAGCAGTCATTTTGGGGATACTTC...GGGGAGTAGCTGAACTGGGGAAGACTGACACATGGTCCTTTCCAGTGCATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGAAGAAGCCACTCAGCTaGAGCAGGAGCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CILCACRLPLHVSLQYQEKKPLS*SRSRSR Trigger: CCTGCTCCTGCTCCTGCTCCAGCTGAGTGGCTTCTT...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATTCTATGAGGCAGGCTATTTCTTGCTGAAGACCAGGCTAGTTGGCCTGGAAGTATCCCCAAAATaGCTGCTTTGGCAGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: STFYEAGYFLLKTRLVGLEVSPK*LLWQLI Trigger: TATGAGCTGCCAAAGCAGTCATTTTGGGGATACTTC...CAGGCCAACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTCATAGAATGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCAGAACCATCACTTCATaGCCCTTCTTCAGAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGLTYAMAQMFRCQSTAFRTITS*PFFRSS Trigger: CGAGCTTCTGAAGAAGGGTCATGAAGTGATGGTTCT...GAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCGCTCTGGTTTTGGAATaGCCTAGAAGGTCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLTYAMAQMFRCQSTAFALVLE*PRRSFW Trigger: CCAGAATGACCTTCTAGGTCATTCCAAAACCAGAGC...GAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR GCA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGCTGAGCAAGGCCTGCTaGAATCACATTGGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CILCACRLPLHVSLQYQELSKAC*NHIGSF Trigger: GAAAGAGCCAATGTGATTGCAGCAGGCCTTGCTCAG...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTCCCCAGCCCCAAGTCCAATATTCGTAGTTCCTTTAAGGAAGAGGTCCCTTTGGCCTTCAAGTaGACAATATTGTCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLPSPKSNIRSSFKEEVPLAFK*TILSYW Trigger: CCAATATGACAATATTGTGCACTTGAAGGCCAAAGG...GACCTCTTCCTTAAAGGAACTACGAATATTGGACTTGGGGCTGGGGAGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAATTGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTAATAGGAAGGAGGCAGTaGGAGTCCCCCACTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PKLYFMCMQASFACVSAVIGRRQ*ESPTVL Trigger: AAGTACAGTGGGGGACTCCCACTGCCTCCTTCCTAT...TACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAATTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGATTCTCACCCTCTCCATaGAAGTCATCCTGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYFMCMQASFACVSAVPRFSPSP*KSSCHS Trigger: TGAGTGACAGGATGACTTTCATGGAGAGGGTGAGAA...TCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCACCATGGAGCCAGCTCTTCAGATGTAACATTCTTTGGTTTAACTTTGATGGAGCCCAATGTCTCTaGCTTCTTGCCCTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VAPWSQLFRCNILWFNFDGAQCL*LLALKS Trigger: AGATTTGAGGGCAAGAAGCCAGAGACATTGGGCTCC...ATCAAAGTTAAACCAAAGAATGTTACATCTGAAGAGCTGGCTCCATGGTGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCAGTGAACACAGCATATAGATaGCATTTCTCACCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPMPWHKCSDVKAQLSVNTAYR*HFSPSP Trigger: TGGAGAGGGTGAGAAATGTCATCTATATGCTGTGTT...CACTGAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAATTGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTAGCTCTGGTTTTGGAATaGCCTAGAAGGTCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKLYFMCMQASFACVSAVALVLE*PRRSFW Trigger: CCAGAATGACCTTCTAGGTCATTCCAAAACCAGAGC...TACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAATTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCACCATGGAGCCAGCTCTTCAGATGTAACATTCTTTGGTTTAACTTTGATTTGGCAGGTCTGCAGTaGAGGCCACCAATAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPWSQLFRCNILWFNFDLAGLQ*RPPIKS Trigger: TGATTTTATTGGTGGCCTCCACTGCAGACCTGCCAA...ATCAAAGTTAAACCAAAGAATGTTACATCTGAAGAGCTGGCTCCATGGTGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGTGTCTGTTTCACATCTCTTGGTTTTCTCATACTAGAGTTATAGACACTCCACAGAACCTTCTGTaGAATCTGAGCAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMCLFHISWFSHTRVIDTPQNLL*NLSKAC Trigger: GCAGGCCTTGCTCAGATTCCACAGAAGGTTCTGTGG...AGTGTCTATAACTCTAGTATGAGAAAACCAAGAGATGTGAAACAGACACATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAAGGAGCCCAATGTCTCTaGCTTCTTGCCCTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RFHTAPILNMLPRYSSCKGAQCL*LLALKS Trigger: AGATTTGAGGGCAAGAAGCCAGAGACATTGGGCTCC...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| 3UTR CAA 72 bp | ATCCTAAATTGTATTTTATGTGCATGCAGGCTTCCTTaGCATGTGTCTCTGCAGTACCAAGAGAGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILNCILCACRLP*HVSLQYQERPE Trigger: TTCTGGCCTCTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAATTTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACAGAACCATCACTTCATaGCCCTTCTTCAGAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNRTITS*PFFRSS Trigger: CGAGCTTCTGAAGAAGGGTCATGAAGTGATGGTTCT...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTACCAAGAGTTTGGTAAGACAGGATaGGGAAATTCTAAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CILCACRLPLHVSLQYQEFGKTG*GNSKSQ Trigger: CTGGGATTTAGAATTTCCTCATCCTGTCTTACCAAA...CTCTTGGTACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | GGATTTGATTGGTGTTTGCTTGAATGTTTGGATGTTGGATGGCATTTTCAAAGGTTCAAGTTGAGCCAATaGCTGAACTCCATTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFDWCLLECLDVGWHFQRFKLSQ*LNSIGH Trigger: GTGGCCAATGGAGTTCAGCCATTGGCTCAACTTGAA...CCTTTGAAAATGCCATCCAACATCCAAACATTCAAGCAAACACCAATCAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTACAAGTGTTCTAAAGACAAATGTAGGGTTACAGGTTTCACACTGCTCCTTGGCAGGTCTGCAGTaGAGGCCACCAATAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSTSVLKTNVGLQVSHCSLAGLQ*RPPIKS Trigger: TGATTTTATTGGTGGCCTCCACTGCAGACCTGCCAA...GGAGCAGTGTGAAACCTGTAACCCTACATTTGTCTTTAGAACACTTGTACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCAGTGACCCAAACCATTTCTTaGAACATTAAGAAGTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPMPWHKCSDVKAQLSVTQTIS*NIKKYP Trigger: GGGATACTTCTTAATGTTGCAAGAAATGGTTTGGGT...CACTGAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAAGCTTGTTCAATACTTGCAAAACCATGTAGAAATTGTGGGCTTCTTACTCTGAGCAAGGCCTGCTaGAATCACATTGGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKACSILAKPCRNCGLLTLSKAC*NHIGSF Trigger: GAAAGAGCCAATGTGATTGCAGCAGGCCTTGCTCAG...AGTAAGAAGCCCACAATTTCTACATGGTTTTGCAAGTATTGAACAAGCTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCTTGTTCAATACTTGCAAAACCATGTAGAAATTGTGGGCTTCTTACTCTTCAAGTTGAGCCAATaGCTGAACTCCATTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKLVQYLQNHVEIVGFLLFKLSQ*LNSIGH Trigger: GTGGCCAATGGAGTTCAGCCATTGGCTCAACTTGAA...GAGTAAGAAGCCCACAATTTCTACATGGTTTTGCAAGTATTGAACAAGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACGCTTTAGTCAACTTCTaGCAACAAAAGAGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNALVNF*QQKRQH Trigger: GTGTTGCCTCTTTTGTTGCCAGAAGTTGACTAAAGC...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031181.16 |
||
| CDS-3UTR TCA 90 bp | GGATTTGATTGGTGTTTGCTTGAATGTTTGGATGTTGGATGGCATTTTCAAAGGTTTGGTAAGACAGGATaGGGAAATTCTAAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFDWCLLECLDVGWHFQRFGKTG*GNSKSQ Trigger: CTGGGATTTAGAATTTCCTCATCCTGTCTTACCAAA...CCTTTGAAAATGCCATCCAACATCCAAACATTCAAGCAAACACCAATCAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAATTGTATTTTATGTGCATGCAGGCTTCCTTTGCATGTGTCTCTGCAGTAACCCAAACCATTTCTTaGAACATTAAGAAGTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLYFMCMQASFACVSAVTQTIS*NIKKYP Trigger: GGGATACTTCTTAATGTTGCAAGAAATGGTTTGGGT...TACTGCAGAGACACATGCAAAGGAAGCCTGCATGCACATAAAATACAATTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAAGCTTGTTCAATACTTGCAAAACCATGTAGAAATTGTGGGCTTCTTACTAACACAGCATATAGATaGCATTTCTCACCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKACSILAKPCRNCGLLTNTAYR*HFSPSP Trigger: TGGAGAGGGTGAGAAATGTCATCTATATGCTGTGTT...AGTAAGAAGCCCACAATTTCTACATGGTTTTGCAAGTATTGAACAAGCTTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| 3UTR CAA 72 bp | GAGCGATTTGATAATTTGCCTAGAATTCTCAAGGGCTaGAACTTGAATGGTATGAAAACATCGTTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERFDNLPRILKG*NLNGMKTSLNK Trigger: TTTATTCAACGATGTTTTCATACCATTCAAGTTCAAGCCCTTGAGAATTCTAGGCAAATTATCAAATCGCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTAGCCATATGTCTGCTTaGGCCATAGTCTCTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSYLCHGTNVQMSKHSFSHMSA*AIVSES Trigger: ACTCTCAGAGACTATGGCCAAAGCAGACATATGGCT...AAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | TCCACATTCTATGAGGCAGGCTATTTCTTGCTGAAGACCAGGCTAGTTGGCCTGCCCAAAATGACTGCTTaGGCAGCTCATAAATATATT | + |
|
Preference number: 5 (lower is better) Translates to: STFYEAGYFLLKTRLVGLPKMTA*AAHKYI Trigger: AATATATTTATGAGCTGCCAAAGCAGTCATTTTGGG...CAGGCCAACTAGCCTGGTCTTCAGCAAGAAATAGCCTGCCTCATAGAATGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTACAAGTGTTCTAAAGACAAATGTAGGGTTACAGGTTTCACACTGCTCCTACACAAGGGGGATCTaGAGAACCTCAGCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSTSVLKTNVGLQVSHCSYTRGI*RTSASR Trigger: TCTGCTGGCTGAGGTTCTCAAGATCCCCCTTGTGTA...GGAGCAGTGTGAAACCTGTAACCCTACATTTGTCTTTAGAACACTTGTACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAAAGCCATATGTCTGCTTaGGCCATAGTCTCTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RFHTAPILNMLPRYSSCKSHMSA*AIVSES Trigger: ACTCTCAGAGACTATGGCCAAAGCAGACATATGGCT...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCCCAAAATGACTGCTTaGGCAGCTCATAAATATATT | + |
|
Preference number: 5 (lower is better) Translates to: SGSYLCHGTNVQMSKHSFPKMTA*AAHKYI Trigger: AATATATTTATGAGCTGCCAAAGCAGTCATTTTGGG...AAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGTCTTACCTATGCCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTGGATCACATCAAACCTaGATTTTTGTAGCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSYLCHGTNVQMSKHSFGSHQT*IFVALS Trigger: TGACAAAGCTACAAAAATCAAGGTTTGATGTGATCC...AAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGGCATAGGTAAGACCCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | CACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAAGTCTGCGGATCACATCAAACCTaGATTTTTGTAGCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTAPILNMLPRYSSCKVCGSHQT*IFVALS Trigger: TGACAAAGCTACAAAAATCAAGGTTTGATGTGATCC...GCAGACTTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGCACAAATGTTCAGATGTCAAAGCACAGCTTTCAGTGTTAGTTTCCCTTTTCAAGTGCACAATATaGTCATATTGGTCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PWHKCSDVKAQLSVLVSLFKCTI*SYWSPN Trigger: GTTTGGAGACCAATATGACAATATTGTGCACTTGAA...AAGGGAAACTAACACTGAAAGCTGTGCTTTGACATCTGAACATTTGTGCCATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCACACTGCTCCAATCCTGAACATGTTACCTAGATATTCATCCTGTAAAAAGAGGCAACACTTTTaGAGGATGAACATCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RFHTAPILNMLPRYSSCKKRQHF*RMNITV Trigger: GACTGTGATGTTCATCCTCAAAAAGTGTTGCCTCTT...TTTACAGGATGAATATCTAGGTAACATGTTCAGGATTGGAGCAGTGTGAAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031181.16 |
||
| CDS-3UTR CAA 90 bp | CAAAACCATGTAGAAATTGTGGGCTTCTTACTCATGGTATATCCGCAAACAAACTTCAAGTGCACAATATaGTCATATTGGTCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNHVEIVGFLLMVYPQTNFKCTI*SYWSPN Trigger: GTTTGGAGACCAATATGACAATATTGTGCACTTGAA...GTTTGTTTGCGGATATACCATGAGTAAGAAGCCCACAATTTCTACATGGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031181.16 ENSMUST00000113333.2 |
||