Pregenerated sensors for UGT2A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000106677

Ensembl transcript IDs: ENSMUST00000147854.6

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	AAAATAAGAAATTCCAGGGCGTCATCAAACTGTCATTaGAATAGCAAAGGAAAGATGAGATGTCTTCAGGAA	+
Preference number: 3 (lower is better) Translates to: KIRNSRASSNCH*NSKGKMRCLQE Trigger: TTCCTGAAGACATCTCATCTTTCCTTTGCTATTTCAATGACAGTTTGATGACGCCCTGGAATTTCTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147854.6
CDS TCA 90 bp	AAAGGGCACTGGATATATTTCAAATGTCAGAGATGGGCTGATGGATaGTGGTGTGATGAAAAGGGCCCCGGAGGCCACAAGGACAGTCAC	+
Preference number: 5 (lower is better) Translates to: KGHWIYFKCQRWADG*WCDEKGPGGHKDSH Trigger: GTGACTGTCCTTGTGGCCTCCGGGGCCCTTTTCATCACACCATCATCCATCAGCCCATCTCTGACATTTGAAATATATCCAGTGCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147854.6
CDS TCA 72 bp	TGGATATATTTCAAATGTCAGAGATGGGCTGATGGATaGTGGTGTGATGAAAAGGGCCCCGGAGGCCACAAG	+
Preference number: 6 (lower is better) Translates to: WIYFKCQRWADG*WCDEKGPGGHK Trigger: CTTGTGGCCTCCGGGGCCCTTTTCATCACACCATCATCCATCAGCCCATCTCTGACATTTGAAATATATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147854.6

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