Pregenerated sensors for UGT1A9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090175

Ensembl transcript IDs: ENSMUST00000073772.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	AAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTTGGAAAGTGACTTCT	+
Preference number: 6 (lower is better) Translates to: KRKQRCHAPQRR*HRLQIPWKVTS Trigger: AGAAGTCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073772.5
CDS TCA 72 bp	ACTGGGCTAAAGAGGTCTGTCATAGTCACTGGGGTCTaGAGAATTTCAGATGCAACTTCAACAGCAGTTCTT	+
Preference number: 6 (lower is better) Translates to: TGLKRSVIVTGV*RISDATSTAVL Trigger: AAGAACTGCTGTTGAAGTTGCATCTGAAATTCTTCAGACCCCAGTGACTATGACAGACCTCTTTAGCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073772.5
CDS CAA 72 bp	CCTCTTGCAAAGATCACTGATGGGAGCGAGAAATATTaGGCGACAATTAATCCACACACATCGAAAGGATCC	+
Preference number: 6 (lower is better) Translates to: PLAKITDGSEKY*ATINPHTSKGS Trigger: GGATCCTTTCGATGTGTGTGGATTAATTGTCGCCAAATATTTCTCGCTCCCATCAGTGATCTTTGCAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073772.5
CDS CCA 72 bp	TCCTGCAGTGTGAAAATGTTAGTTCAAAGAAACCTCTaGCTGAACCAGTCAAGAAAGAACGTATACTGTGTT	+
Preference number: 6 (lower is better) Translates to: SCSVKMLVQRNL*LNQSRKNVYCV Trigger: AACACAGTATACGTTCTTTCTTGACTGGTTCAGCCAGAGGTTTCTTTGAACTAACATTTTCACACTGCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073772.5

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