Pregenerated sensors for UGT1A8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000089675

Ensembl transcript IDs: ENSMUST00000113139.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGGATCCCAAAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTTGGAAAGTGGCTTTCCCGGGTGGC	+
Preference number: 5 (lower is better) Translates to: WIPKRKQRCHAPQRR*HRLQIPWKVAFPGG Trigger: GCCACCCGGGAAAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTTTGGGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113139.2
CDS CAA 72 bp	CTCCTACAGTGTGAAAACAGTACTTGGAAGAAACCTTaGCCTGAATGCTTCAGTAGTGAGAACATTCCTACT	+
Preference number: 6 (lower is better) Translates to: LLQCENSTWKKP*PECFSSENIPT Trigger: AGTAGGAATGTTCTCACTACTGAAGCATTCAGGCAAAGGTTTCTTCCAAGTACTGTTTTCACACTGTAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113139.2
CDS GCA 72 bp	TCCTACAGTGTGAAAACAGTACTTGGAAGAAACCTTTaGCTGAATGCTTCAGTAGTGAGAACATTCCTACTT	+
Preference number: 6 (lower is better) Translates to: SYSVKTVLGRNL*LNASVVRTFLL Trigger: AAGTAGGAATGTTCTCACTACTGAAGCATTCAGGCAAAGGTTTCTTCCAAGTACTGTTTTCACACTGTAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113139.2
CDS GCA 72 bp	TGTGAAAACAGTACTTGGAAGAAACCTTTGCCTGAATaGTTCAGTAGTGAGAACATTCCTACTTCTCGATTT	+
Preference number: 6 (lower is better) Translates to: CENSTWKKPLPE*FSSENIPTSRF Trigger: AAATCGAGAAGTAGGAATGTTCTCACTACTGAAGCATTCAGGCAAAGGTTTCTTCCAAGTACTGTTTTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113139.2
CDS CAA 90 bp	TTAAACAAACTCCTACAGTGTGAAAACAGTACTTGGAAGAAACCTTaGCCTGAATGCTTCAGTAGTGAGAACATTCCTACTTCTCGATTT	+
Preference number: 6 (lower is better) Translates to: LNKLLQCENSTWKKP*PECFSSENIPTSRF Trigger: AAATCGAGAAGTAGGAATGTTCTCACTACTGAAGCATTCAGGCAAAGGTTTCTTCCAAGTACTGTTTTCACACTGTAGGAGTTTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113139.2

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