Pregenerated sensors for UGT1A7C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090124Ensembl transcript IDs: ENSMUST00000058237.14, ENSMUST00000113135.6, ENSMUST00000126203.8, ENSMUST00000150634.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTaGAAGACTCAGAATCAAACTAGGCAGCAGCCATGGTTATTCATG | + |
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Preference number: 1 (lower is better) Translates to: RLSISKAASHQPMHL*KTQNQTRQQPWLFM Trigger: CATGAATAACCATGGCTGCTGCCTAGTTTGATTCTGAGTCTTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR GCA 90 bp | TTGCACAACTTCCCAGTGATATCACAGGCTGAGCATCAGCAAGGCTaGAAGCCATCAGCCAATGCACCTTTGGAAGACTCAGAATCAAAC | + |
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Preference number: 1 (lower is better) Translates to: LHNFPVISQAEHQQG*KPSANAPLEDSESN Trigger: GTTTGATTCTGAGTCTTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCTGTGATATCACTGGGAAGTTGTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR CCA 90 bp | ATACTCAAAGAGACTGTCCGGGAACCTTCTTGTTTCAGGATAGTATaGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ILKETVREPSCFRIV*EQRKRRYLYPCISF Trigger: GAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATACTATCCTGAAACAAGAAGGTTCCCGGACAGTCTCTTTGAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 90 bp | GCCTCAAGATATAATTCATGGTTTGTTCATGTACATGCTCCTGTTTaGTATGCCACCTTCTGTTACCCTCACAGAACTGAGCCAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: ASRYNSWFVHVHAPV*YATFCYPHRTEPKQ Trigger: TTGCTTTGGCTCAGTTCTGTGAGGGTAACAGAAGGTGGCATATCAAACAGGAGCATGTACATGAACAAACCATGAATTATATCTTGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 90 bp | CAGACTTTCTGTAAATTACCAACAGATGGCAAGAGTTGTCTAGACTaGAGATACTGGAAAAGCACATCACATATACTAGAACCTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: QTFCKLPTDGKSCLD*RYWKSTSHILEPSL Trigger: CAGGGAAGGTTCTAGTATATGTGATGTGCTTTTCCAGTATCTTCAGTCTAGACAACTCTTGCCATCTGTTGGTAATTTACAGAAAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGAACACAGCCAGGTCCAGAGGCTCTATAGGACGGTCCTTGTGAAGGCTGGATTGGCATTGTCCATCTaGTCGCCAAATAGGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: PEHSQVQRLYRTVLVKAGLALSI*SPNRGI Trigger: GATGCCCCTATTTGGCGATCAGATGGACAATGCCAA...TCCAGCCTTCACAAGGACCGTCCTATAGAGCCTCTGGACCTGGCTGTGTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCGCCCCTTTCCCCCAAAGCATTTCCGGCAGCCATAGGCACAACATTTAAAGGCTGGAGAGGCGCATaGTGTTCTCCTTGTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HSPLSPKAFPAAIGTTFKGWRGA*CSPCSS Trigger: AGAGCTACAAGGAGAACATCATGCGCCTCTCCAGCC...TTTAAATGTTGTGCCTATGGCTGCCGGAAATGCTTTGGGGGAAAGGGGCGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTGAGCATCAGCAAGGCTaGAAGCCATCAGCCAATGCA | + |
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Preference number: 2 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIEHQQG*KPSANA Trigger: TGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTC...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTAGTGATATCACAGGCTaGGCATCAGCAAGGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: EDCDSPDSSSLFLPQDIISDITG*ASARLQ Trigger: TTGCAGCCTTGCTGATGCTCAGCCTGTGATATCACT...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTTCCCCCAAAGCATTTCCGGCAGCCATAGGCACAACATTTAAAGACAATGAGTTTCCATGCGCTTaGCATTGTCCATCTGATCGC | + |
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Preference number: 2 (lower is better) Translates to: PLSPKAFPAAIGTTFKDNEFPCA*HCPSDR Trigger: GCGATCAGATGGACAATGCCAAGCGCATGGAAACTC...ATTGTCTTTAAATGTTGTGCCTATGGCTGCCGGAAATGCTTTGGGGGAAAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATGTGATAAAAGCTTGGTCTTCAGTGTGTGCTATTGAGAAGCAGGGAAAAGAGCATCAGCAAGGCTaGAAGCCATCAGCCAATGCA | + |
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Preference number: 2 (lower is better) Translates to: SHVIKAWSSVCAIEKQGKEHQQG*KPSANA Trigger: TGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTC...TTTTCCCTGCTTCTCAATAGCACACACTGAAGACCAAGCTTTTATCACATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTTTTCTCACACTAGACTaGCACTTAATGGTTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIFLTLD*HLMVAQ Trigger: TTGTGCAACCATTAAGTGGCAGTCTAGTGTGAGAAA...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTTCACTGAAAGCAGAGTaGCAGACTTTCTGTAAATTA | + |
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Preference number: 2 (lower is better) Translates to: EDCDSPDSSSLFLPQDIISLKAE*QTFCKL Trigger: TAATTTACAGAAAGTCTGGCACTCTGCTTTCAGTGA...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTCACTGTAATTACAGCTaGTTCCTTTCTTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIHCNYS*FLSCVY Trigger: ATACACACAAGAAAGGAACCAGCTGTAATTACAGTG...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGACAGCCAATGCACCTTTaGAAGACTCAGAATCAAACT | + |
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Preference number: 2 (lower is better) Translates to: VWEQRKRRYLYPCISFKGQPMHL*KTQNQT Trigger: AGTTTGATTCTGAGTCTTCCAAAGGTGCATTGGCTG...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR GCA 90 bp | GTTACCCTCACAGAACTGAGCCAAAGCAAGATAACCTCTAAGTTAAACAGCCCTTCACTGAAAGCAGAGTaGCAGACTTTCTGTAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: VTLTELSQSKITSKLNSPSLKAE*QTFCKL Trigger: TAATTTACAGAAAGTCTGGCACTCTGCTTTCAGTGA...AGGGCTGTTTAACTTAGAGGTTATCTTGCTTTGGCTCAGTTCTGTGAGGGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTCAGCCAATGCACCTTTaGAAGACTCAGAATCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SKGLFWASYRLFIPDHVVQPMHL*KTQNQT Trigger: AGTTTGATTCTGAGTCTTCCAAAGGTGCATTGGCTG...AACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTATGTCACTGTAATTACAGCTaGTTCCTTTCTTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: KVYFGLAIDFSSLIMWLCHCNYS*FLSCVY Trigger: ATACACACAAGAAAGGAACCAGCTGTAATTACAGTG...ACATAACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTATGTTGTTTCAGGATAGTATaGGAACAAAGAAAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: KVYFGLAIDFSSLIMWLCCFRIV*EQRKRR Trigger: CCTTCTCTTTCTTTGTTCCCATACTATCCTGAAACA...ACATAACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR GCA 72 bp | TCATGGGCGGCCGGGCGCAGGTGTGGTGCCCCCTTGTaGCTCATCACGTATTCCACCCAGAACACAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SWAAGRRCGAPL*LITYSTQNTAR Trigger: CCTGGCTGTGTTCTGGGTGGAATACGTGATGAGGCACAAGGGGGCACCACACCTGCGCCCGGCCGCCCATGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| 3UTR GCA 72 bp | GGACATTCAGGGTCACCCCAGCTCCCCGAGTTTCCATaGGCTTGGCATTGTCCATCTGATCGCCAAATAGGG | + |
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Preference number: 3 (lower is better) Translates to: GHSGSPQLPEFP*AWHCPSDRQIG Trigger: CCCTATTTGGCGATCAGATGGACAATGCCAAGCGCATGGAAACTCGGGGAGCTGGGGTGACCCTGAATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| 3UTR CCA 72 bp | ATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTaGAAGACTCAGAATCAAACTAGGCAGCAGCCATGG | + |
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Preference number: 3 (lower is better) Translates to: ISKAASHQPMHL*KTQNQTRQQPW Trigger: CCATGGCTGCTGCCTAGTTTGATTCTGAGTCTTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 72 bp | TTAATGGTTGCACAACTTCCCAGTGATATCACAGGCTaGGCATCAGCAAGGCTGCAAGCCATCAGCCAATGC | + |
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Preference number: 3 (lower is better) Translates to: LMVAQLPSDITG*ASARLQAISQC Trigger: GCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCTGTGATATCACTGGGAAGTTGTGCAACCATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 72 bp | ACTAGACTGCCACTTAATGGTTGCACAACTTCCCAGTaGTATCACAGGCTGAGCATCAGCAAGGCTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: TRLPLNGCTTSQ*YHRLSISKAAS Trigger: GCTTGCAGCCTTGCTGATGCTCAGCCTGTGATATCACTGGGAAGTTGTGCAACCATTAAGTGGCAGTCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR GCA 72 bp | GCAGGGGAAACTGTGGGGCTGTCACTGAAAGCAGAGTaGCAGACTTTCTGTAAATTACCAACAGATGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: AGETVGLSLKAE*QTFCKLPTDGK Trigger: CTTGCCATCTGTTGGTAATTTACAGAAAGTCTGGCACTCTGCTTTCAGTGACAGCCCCACAGTTTCCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR CCA 72 bp | GAGACTGTCCGGGAACCTTCTTGTTTCAGGATAGTATaGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: ETVREPSCFRIV*EQRKRRYLYPC Trigger: ACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATACTATCCTGAAACAAGAAGGTTCCCGGACAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGAAGACTCAGAATCAAACTAGGCAGCAGCCATGGTTATTCATGAGCACTCAGCTGGTTCCTTTCTaGTGTGTATGTATACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LWKTQNQTRQQPWLFMSTQLVPF*CVCIPV Trigger: CACAGGTATACATACACACAAGAAAGGAACCAGCTG...AGTGCTCATGAATAACCATGGCTGCTGCCTAGTTTGATTCTGAGTCTTCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR-3UTR CAA 90 bp | GTTACCCTCACAGAACTGAGCCAAAGCAAGATAACCTCTAAGTTAAACAGCCCTCAGCTGGTTCCTTTCTaGTGTGTATGTATACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VTLTELSQSKITSKLNSPQLVPF*CVCIPV Trigger: CACAGGTATACATACACACAAGAAAGGAACCAGCTG...AGGGCTGTTTAACTTAGAGGTTATCTTGCTTTGGCTCAGTTCTGTGAGGGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR CCA 72 bp | TCTGAAATGCCCCCAAAGAGCCATGTGATAAAAGCTTaGTCTTCAGTGTGTGCTATTGAGAAGCAGGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SEMPPKSHVIKA*SSVCAIEKQGK Trigger: TTTTCCCTGCTTCTCAATAGCACACACTGAAGACCAAGCTTTTATCACATGGCTCTTTGGGGGCATTTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR CCA 72 bp | GCAGCCATGGTTATTCATGAGCACTGTAATTACAGCTaGTTCCTTTCTTGTGTGTATGTATACCTGTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: AAMVIHEHCNYS*FLSCVYVYLCE Trigger: TTCACACAGGTATACATACACACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 72 bp | TATAATTCATGGTTTGTTCATGTACATGCTCCTGTTTaGTATGCCACCTTCTGTTACCCTCACAGAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: YNSWFVHVHAPV*YATFCYPHRTE Trigger: CTCAGTTCTGTGAGGGTAACAGAAGGTGGCATATCAAACAGGAGCATGTACATGAACAAACCATGAATTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR TCA 72 bp | TGTTACTGTAACAAATACCTGAGATGTAGCAACTCATaGGCAAAGGTTTATTTTGGGCTAGCTATAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: CYCNKYLRCSNS*AKVYFGLAIDF Trigger: AAAGTCTATAGCTAGCCCAAAATAAACCTTTGCTCATGAGTTGCTACATCTCAGGTATTTGTTACAGTAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR GCA 72 bp | AAGTTCTTGGTTTGGGAACACAATAGAAGATGTACTTaGCTTAGAACATACTTTGGTTTTCATCAAATTCCG | + |
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Preference number: 3 (lower is better) Translates to: KFLVWEHNRRCT*LRTYFGFHQIP Trigger: CGGAATTTGATGAAAACCAAAGTATGTTCTAAGGCAAGTACATCTTCTATTGTGTTCCCAAACCAAGAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| 3UTR CAA 72 bp | AGGTCATGGGCGGCCGGGCGCAGGTGTGGTGCCCCCTaGTGCCTCATCACGTATTCCACCCAGAACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSWAAGRRCGAP*CLITYSTQNTA Trigger: GGCTGTGTTCTGGGTGGAATACGTGATGAGGCACAAGGGGGCACCACACCTGCGCCCGGCCGCCCATGACCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| CDS-3UTR GCA 90 bp | CAGGTCCAGAGGCTCTATAGGACGGTCCTTGTGAAGGCTGGAGAGGCGCATGATCACCAGCAGCCTGCCTaGCTGGGCCAAGCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVQRLYRTVLVKAGEAHDHQQPA*LGQARG Trigger: GCCTCTGGCTTGGCCCAGGCAGGCAGGCTGCTGGTG...ATCATGCGCCTCTCCAGCCTTCACAAGGACCGTCCTATAGAGCCTCTGGACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| CDS-3UTR CCA 90 bp | GCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTGGAAGACTCAGGCCGGGCGCAGGTGTaGTGCCCCCTTGTGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: AEHQQGCKPSANAPLEDSGRAQV*CPLVPH Trigger: ATGAGGCACAAGGGGGCACCACACCTGCGCCCGGCC...TGAGTCTTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | GGGCGCAGGTGTGGTGCCCCCTTGTGCCTCATCACGTATTCCACCCAGAACACAGAGAGGAAGGGAGGCTaGAAAGTCTGCAGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GRRCGAPLCLITYSTQNTERKGG*KVCRSH Trigger: ATGGCTCCTGCAGACTTTCCAGCCTCCCTTCCTCTC...TGTGTTCTGGGTGGAATACGTGATGAGGCACAAGGGGGCACCACACCTGCGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| CDS-3UTR GCA 90 bp | GTTACCCTCACAGAACTGAGCCAAAGCAAGATAACCTCTAAGTTAAACAGCCCTCACCAGCAGCCTGCCTaGCTGGGCCAAGCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VTLTELSQSKITSKLNSPHQQPA*LGQARG Trigger: GCCTCTGGCTTGGCCCAGGCAGGCAGGCTGCTGGTG...AGGGCTGTTTAACTTAGAGGTTATCTTGCTTTGGCTCAGTTCTGTGAGGGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | CTTTTCATCCCTGATCATGTGGTTATGTTGCTTTGGGACCTGTGTAAGATAAGAGGCCGGGCGCAGGTGTaGTGCCCCCTTGTGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFIPDHVVMLLWDLCKIRGRAQV*CPLVPH Trigger: ATGAGGCACAAGGGGGCACCACACCTGCGCCCGGCC...TCTTATCTTACACAGGTCCCAAAGCAACATAACCACATGATCAGGGATGAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | TCACAGGCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTGGAAGAATGCCCGAGTCTTTaGATGACCAAGCAGATCATT | + |
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Preference number: 4 (lower is better) Translates to: SQAEHQQGCKPSANAPLEECPSL*MTKQII Trigger: AATGATCTGCTTGGTCATCCAAAGACTCGGGCATTC...TTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR TCA 90 bp | TCACAGGCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTGGAAAAGTCATGGTGTCTGTaGATTTTAAGAGCATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQAEHQQGCKPSANAPLEKSWCL*ILRAFW Trigger: CCAGAATGCTCTTAAAATTCACAGACACCATGACTT...TTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | TCTTGGATTTGTGTGATTTCTTCACTCGCCCCTTTCCCCCAAAGCATTTCCGGCCCTCAGCAATTTCCATaGCTTTCTTCTCCGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: SWICVISSLAPFPQSISGPQQFP*LSSPES Trigger: AGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGG...GCCGGAAATGCTTTGGGGGAAAGGGGCGAGTGAAGAAATCACACAAATCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| CDS-3UTR CCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTGTGTTCCAGAGAGCATaGGAAACCTCTGAAGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIVFQRA*ETSEEV Trigger: TACCTCTTCAGAGGTTTCCCATGCTCTCTGGAACAC...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | CTTTTCATCCCTGATCATGTGGTTATGTTGCTTTGGGACCTGTGTAAGATAAGAGAGAGGAAGGGAGGCTaGAAAGTCTGCAGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LFIPDHVVMLLWDLCKIRERKGG*KVCRSH Trigger: ATGGCTCCTGCAGACTTTCCAGCCTCCCTTCCTCTC...TCTTATCTTACACAGGTCCCAAAGCAACATAACCACATGATCAGGGATGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTCCTCAGCAATTTCCATaGCTTTCTTCTCCGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIPQQFP*LSSPES Trigger: AGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGG...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | GTTACCCTCACAGAACTGAGCCAAAGCAAGATAACCTCTAAGTTAAACAGCCCTGAGTTTCCATGCGCTTaGCATTGTCCATCTGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLTELSQSKITSKLNSPEFPCA*HCPSDR Trigger: GCGATCAGATGGACAATGCCAAGCGCATGGAAACTC...AGGGCTGTTTAACTTAGAGGTTATCTTGCTTTGGCTCAGTTCTGTGAGGGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGCCACTGTCAACACAATaGCCAGGAGGAAGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QQPWLFMSTVITAGSFLVPLSTQ*PGGSQS Trigger: TGATTGGCTTCCTCCTGGCCATTGTGTTGACAGTGG...CACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CTTTTCATCCCTGATCATGTGGTTATGTTGCTTTGGGACCTGTGTAAGATAAGATTCATGCTAAGCCAGTaGCTTCCATCCTGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFIPDHVVMLLWDLCKIRFMLSQ*LPSWGT Trigger: GGTCCCCCAGGATGGAAGCCACTGGCTTAGCATGAA...TCTTATCTTACACAGGTCCCAAAGCAACATAACCACATGATCAGGGATGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTGGAATCCTCCTGTAGTATTTaGATTCTCCCAAAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQAEHQQGCKPSANAPLESSCSI*ILPKAN Trigger: ATTTGCTTTTGGGAGAATCCAAATACTACAGGAGGA...TTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGTGTAAGTTGGCCAGCCGTTaGGGAAACGTCATGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPWLFMSTVITAGSFLVCKLASR*GNVMWS Trigger: AGACCACATGACGTTTCCCCAACGGCTGGCCAACTT...ACACACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR TCA 90 bp | CTTTGGAAGACTCAGAATCAAACTAGGCAGCAGCCATGGTTATTCATGAGCACTATTCCTCCCTCCTGCTaGCTTTTCCATTGTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LWKTQNQTRQQPWLFMSTIPPSC*LFHCAS Trigger: TGATGCACAATGGAAAAGTCAGCAGGAGGGAGGAAT...AGTGCTCATGAATAACCATGGCTGCTGCCTAGTTTGATTCTGAGTCTTCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS-3UTR GCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGAAATGGTTTCGTCAGCTaGCAACTCACCTCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGNGFVS*QLTSGT Trigger: TGTTCCGGAGGTGAGTTGGCAGCTGACGAAACCATT...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGGGTTGTTTCCAAAGGTaGGAAAACGGGTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQPWLFMSTVITAGSFLVGCFQR*ENGSAV Trigger: AACTGCAGACCCGTTTTCGCACCTTTGGAAACAACC...CACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGCAACCAAATGGACACTaGGCTGAAGAGGTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQPWLFMSTVITAGSFLVQPNGH*AEEVCH Trigger: ATGACAGACCTCTTCAGCCCAGTGTCCATTTGGTTG...CACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS-3UTR CCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTCCAAGCAGATCATTTTaGGGTAGCCATTTGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EDCDSPDSSSLFLPQDIIPSRSF*GSHLTR Trigger: TCTTGTCAAATGGCTACCCCAAAATGATCTGCTTGG...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGTGTGAGTTTCCATGCGCTTaGCATTGTCCATCTGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWLFMSTVITAGSFLVCEFPCA*HCPSDR Trigger: GCGATCAGATGGACAATGCCAAGCGCATGGAAACTC...ACACACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGAATAGGACACAGGGCTTaGGCTTTGACCAAGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGIGHRA*ALTKHV Trigger: CACATGCTTGGTCAAAGCCCAAGCCCTGTGTCCTAT...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTTGTGGTCTGAGAATTTaGTGTAGAATCTGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EDCDSPDSSSLFLPQDIICGLRI*CRIWAH Trigger: ATGTGCCCAGATTCTACACCAAATTCTCAGACCACA...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGACTTTGCAAGATTCGATaGTCTAGTTCCGGTGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGLCKIR*SSSGVA Trigger: CGCTACACCGGAACTAGACCATCGAATCTTGCAAAG...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | CTTTTCATCCCTGATCATGTGGTTATGTTGCTTTGGGACCTGTGTAAGATAAGAGGAGGCTCTGGCAGTTaGAAAAGAACATGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LFIPDHVVMLLWDLCKIRGGSGS*KRTCPR Trigger: TCGTGGACATGTTCTTTTCCAACTGCCAGAGCCTCC...TCTTATCTTACACAGGTCCCAAAGCAACATAACCACATGATCAGGGATGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGATCCTTCAGGAGGCTCTaGCAGTTGGAAAAGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGSFRRL*QLEKNM Trigger: CATGTTCTTTTCCAACTGCCAGAGCCTCCTGAAGGA...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGAGAAGAAACCTTTGGCTaGAGAATCAAGCAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGEETFG*RIKQRK Trigger: CTTCCTCTGCTTGATTCTCCAGCCAAAGGTTTCTTC...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAAGACTCAGAATCAAACTAGGCAGCAGCCATGGTTATTCATGAGCACTCCAAGCAGATCATTTTaGGGTAGCCATTTGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWKTQNQTRQQPWLFMSTPSRSF*GSHLTR Trigger: TCTTGTCAAATGGCTACCCCAAAATGATCTGCTTGG...AGTGCTCATGAATAACCATGGCTGCTGCCTAGTTTGATTCTGAGTCTTCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR CCA 90 bp | GTATGGGAACAAAGAAAGAGAAGGTACCTCTATCCCTGTATCTCCTTCAAAGGAGAATGCCCGAGTCTTTaGATGACCAAGCAGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: VWEQRKRRYLYPCISFKGECPSL*MTKQII Trigger: AATGATCTGCTTGGTCATCCAAAGACTCGGGCATTC...TCCTTTGAAGGAGATACAGGGATAGAGGTACCTTCTCTTTCTTTGTTCCCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTTTCCCTGGTGGCAGTTaGTTCCACCAATGTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKGLFWASYRLFIPDHVVFPGGS*FHQCRS Trigger: TGATCTACATTGGTGGAATCAACTGCCACCAGGGAA...AACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS-3UTR GCA 90 bp | GAGGATTGTGACAGCCCAGACTCTAGCTCCCTGTTCCTGCCTCAAGATATAATTCTGCGTATGAGAAACTaGATATGTTTTCACTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EDCDSPDSSSLFLPQDIILRMRN*ICFHYK Trigger: TTTGTAGTGAAAACATATGCAGTTTCTCATACGCAG...AATTATATCTTGAGGCAGGAACAGGGAGCTAGAGTCTGGGCTGTCACAATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | GTTACCCTCACAGAACTGAGCCAAAGCAAGATAACCTCTAAGTTAAACAGCCCTCACTACAAAATTCAATaGTTTCGTCAGCTGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTELSQSKITSKLNSPHYKIQ*FRQLPT Trigger: AGTTGGCAGCTGACGAAACCATTGAATTTTGTAGTG...AGGGCTGTTTAACTTAGAGGTTATCTTGCTTTGGCTCAGTTCTGTGAGGGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | AGCCATGTGATAAAAGCTTGGTCTTCAGTGTGTGCTATTGAGAAGCAGGGAAAAATTCGAAGAAACCTTTaGCTGGAGAATCAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHVIKAWSSVCAIEKQGKIRRNL*LENQAE Trigger: CTCTGCTTGATTCTCCAGCCAAAGGTTTCTTCGAAT...TTTTCCCTGCTTCTCAATAGCACACACTGAAGACCAAGCTTTTATCACATGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | CTTTTCATCCCTGATCATGTGGTTATGTTGCTTTGGGACCTGTGTAAGATAAGAAGGCTTCAAATTCCTTaGAAAGTGGCTTTCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPDHVVMLLWDLCKIRRLQIP*KVAFPG Trigger: ACCAGGGAAAGCCACTTTCCAAGGAATTTGAAGCCT...TCTTATCTTACACAGGTCCCAAAGCAACATAACCACATGATCAGGGATGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | AGCAAAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTCTTTGCAAGATTCGATaGTCTAGTTCCGGTGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKGLFWASYRLFIPDHVVLCKIR*SSSGVA Trigger: CGCTACACCGGAACTAGACCATCGAATCTTGCAAAG...AACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | AAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTATGTCCACTGTCAACACAATaGCCAGGAGGAAGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KVYFGLAIDFSSLIMWLCPLSTQ*PGGSQS Trigger: TGATTGGCTTCCTCCTGGCCATTGTGTTGACAGTGG...ACATAACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | AGCAAAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTATAGTCACTGGGGTCTaGAGAACTTCAGAGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKGLFWASYRLFIPDHVVIVTGV*RTSEAI Trigger: TATTGCCTCTGAAGTTCTCCAGACCCCAGTGACTAT...AACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CCA 90 bp | AGCAAAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTCCTCAGCAATTTCCATaGCTTTCTTCTCCGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGLFWASYRLFIPDHVVPQQFP*LSSPES Trigger: AGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGG...AACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058237.14 ENSMUST00000113135.6 |
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| CDS-3UTR CCA 90 bp | AAGGTTTATTTTGGGCTAGCTATAGACTTTTCATCCCTGATCATGTGGTTATGTAGCCACAGAGAATTCTaGTGTAAGGAAGGTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVYFGLAIDFSSLIMWLCSHREF*CKEGRD Trigger: GTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCT...ACATAACCACATGATCAGGGATGAAAAGTCTATAGCTAGCCCAAAATAAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS-3UTR GCA 90 bp | CAGCCATGGTTATTCATGAGCACTGTAATTACAGCTGGTTCCTTTCTTGTGTGTTTCAGAGGCAATATCTaGAGCACTTTTGAAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QPWLFMSTVITAGSFLVCFRGNI*STFEKL Trigger: AAGTTTTTCAAAAGTGCTGCAGATATTGCCTCTGAA...ACACACAAGAAAGGAACCAGCTGTAATTACAGTGCTCATGAATAACCATGGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS-3UTR CAA 90 bp | GCTGAGCATCAGCAAGGCTGCAAGCCATCAGCCAATGCACCTTTGGAAGACTCAGGGAGAGAAAAGTACTaGGCTACAGTTAAGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AEHQQGCKPSANAPLEDSGREKY*ATVKPH Trigger: GTGCGGCTTAACTGTAGCCAAGTACTTTTCTCTCCC...TGAGTCTTCCAAAGGTGCATTGGCTGATGGCTTGCAGCCTTGCTGATGCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS TCA 90 bp | TGGATCCCAAAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTTGGAAAGTGGCTTTCCCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WIPKRKQRCHAPQRR*HRLQIPWKVAFPGG Trigger: GCCACCAGGGAAAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTTTGGGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS TCA 90 bp | GGAGCCAGAGTGTGTGATGAATGCCCGAGTCTTTGGATGACCGTCTaGGGAATTCTGCCCAAAGCCTCAGCAATTTCCATGGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GARVCDECPSLWMTV*GILPKASAISMAFF Trigger: GAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCAGACGGTCATCCAAAGACTCGGGCATTCATCACACACTCTGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
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| CDS TCA 90 bp | ATACCATGGGAGCCAGAGTGTGTGATGAATGCCCGAGTCTTTGGATaGCCGTCTGAGGAATTCTGCCCAAAGCCTCAGCAATTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: IPWEPECVMNARVFG*PSEEFCPKPQQFPW Trigger: CCATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCAGACGGTCATCCAAAGACTCGGGCATTCATCACACACTCTGGCTCCCATGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
||
| CDS TCA 90 bp | TGGATCCCAAAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTCCGGAACAACCACTACGACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WIPKRKQRCHAPQRR*HRLQIPPEQPLRPH Trigger: ATGAGGTCGTAGTGGTTGTTCCGGAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTTTGGGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126203.8 ENSMUST00000150634.8 |
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| CDS TCA 90 bp | TGGATCCCAAAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTGAGTCAGCTTTCCCTTCTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WIPKRKQRCHAPQRR*HRLQIPESAFPSSY Trigger: GTAAGAAGAAGGGAAAGCTGACTCAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTTTGGGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS CCA 90 bp | GGATATTCGAACACAAAATCGTACCGTAACAGCCACAGAGAATTCTaGTGTAAGGAAGGTAGGGACACATCTCTCTTGAGGAGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GYSNTKSYRNSHREF*CKEGRDTSLLRRSE Trigger: CTCAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCTGTTACGGTACGATTTTGTGTTCGAATATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS CAA 90 bp | ATCACACCACAGGGCATGGCTGGGTCTGTGAACAGAGCATCAAACTaGTTCTCCCTGAGGAAGCTGAGGGTGGCAGAGTCCTTCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITPQGMAGSVNRASN*FSLRKLRVAESFRR Trigger: CCTCCTGAAGGACTCTGCCACCCTCAGCTTCCTCAGGGAGAACAAGTTTGATGCTCTGTTCACAGACCCAGCCATGCCCTGTGGTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS TCA 72 bp | GAGCCAGAGTGTGTGATGAATGCCCGAGTCTTTGGATaGCCGTCTGAGGAATTCTGCCCAAAGCCTCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: EPECVMNARVFG*PSEEFCPKPQQ Trigger: TTGCTGAGGCTTTGGGCAGAATTCCTCAGACGGTCATCCAAAGACTCGGGCATTCATCACACACTCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
||
| CDS CAA 90 bp | CTGAGGAAGCTGAGGGTGGCAGAGTCCTTCAGGAGGCTCTGGCAGTaGGAAAAGAACATGTCCACGACAATCATGTTGTTCCTGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRKLRVAESFRRLWQ*EKNMSTTIMLFLYS Trigger: AGAGTACAGGAACAACATGATTGTCGTGGACATGTTCTTTTCCAACTGCCAGAGCCTCCTGAAGGACTCTGCCACCCTCAGCTTCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS CAA 90 bp | GGTCTGAGAATTTGGTGTAGAATCTGGGCACATAGGACACAGGGCTaGGGCTTTGACCAAGCATGTGTTCCAGAGAGCATGGGAAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLRIWCRIWAHRTQG*GFDQACVPESMGNL Trigger: GAGGTTTCCCATGCTCTCTGGAACACATGCTTGGTCAAAGCCCAAGCCCTGTGTCCTATGTGCCCAGATTCTACACCAAATTCTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS CCA 72 bp | AATGGACACTGGGCTGAAGAGGTCTGTCATAGTCACTaGGGTCTGGAGAACTTCAGAGGCAATATCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NGHWAEEVCHSH*GLENFRGNICS Trigger: GCTGCAGATATTGCCTCTGAAGTTCTCCAGACCCCAGTGACTATGACAGACCTCTTCAGCCCAGTGTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS TCA 72 bp | GTGTGTGATGAATGCCCGAGTCTTTGGATGACCGTCTaGGGAATTCTGCCCAAAGCCTCAGCAATTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VCDECPSLWMTV*GILPKASAISM Trigger: CATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCAGACGGTCATCCAAAGACTCGGGCATTCATCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126203.8 |
||
| CDS TCA 72 bp | AAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTGAGTCAGCTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KRKQRCHAPQRR*HRLQIPESAFP Trigger: AGGGAAAGCTGACTCAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
||
| CDS TCA 72 bp | AAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTCCGGAACAACCACTA | + |
|
Preference number: 6 (lower is better) Translates to: KRKQRCHAPQRR*HRLQIPPEQPL Trigger: TAGTGGTTGTTCCGGAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126203.8 ENSMUST00000150634.8 |
||
| CDS TCA 72 bp | AAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTTGGAAAGTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KRKQRCHAPQRR*HRLQIPWKVAF Trigger: GAAAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
||
| CDS CAA 72 bp | TGGCAGTTGGAAAAGAACATGTCCACGACAATCATGTaGTTCCTGTACTCTCTTAGAGGACCCATCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WQLEKNMSTTIM*FLYSLRGPIRE Trigger: CTCCCTGATGGGTCCTCTAAGAGAGTACAGGAACAACATGATTGTCGTGGACATGTTCTTTTCCAACTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS CAA 90 bp | AGCCACAGAGAATTCTGGTGTAAGGAAGGTAGGGACACATCTCTCTaGAGGAGGTCTGAGGCAATGATTTCATACTTTGAATACAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SHREFWCKEGRDTSL*RRSEAMISYFEYRQ Trigger: TTGTCTGTATTCAAAGTATGAAATCATTGCCTCAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS CCA 72 bp | TCCTACAGTGTGAAAACAGTAATTCGAAGAAACCTTTaGCTGGAGAATCAAGCAGAGGAAGTATTCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SYSVKTVIRRNL*LENQAEEVFLP Trigger: AGGGAGGAATACTTCCTCTGCTTGATTCTCCAGCCAAAGGTTTCTTCGAATTACTGTTTTCACACTGTAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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| CDS CAA 72 bp | GAATTCTGGTGTAAGGAAGGTAGGGACACATCTCTCTaGAGGAGGTCTGAGGCAATGATTTCATACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: EFWCKEGRDTSL*RRSEAMISYFE Trigger: TTCAAAGTATGAAATCATTGCCTCAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113135.6 |
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| CDS TCA 72 bp | GGAGAATCAAGCAGAGGAAGTATTCCTCCCTCCTGCTaGCTTTTCCATTGTGCATCAATAAAAATCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: GESSRGSIPPSC*LFHCASIKILN Trigger: GTTCAAGATTTTTATTGATGCACAATGGAAAAGTCAGCAGGAGGGAGGAATACTTCCTCTGCTTGATTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058237.14 |
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