Pregenerated sensors for UGT1A6B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090145

Ensembl transcript IDs: ENSMUST00000113137.2, ENSMUST00000113138.8

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGGCAGGTTGAGATACTCAGCCAGGATCACACCACAGGGCATGGCTaGGTCTGTGAACAGAGCATCAAACTTGTTCTCCCTGAGGAAGCT	+
Preference number: 5 (lower is better) Translates to: GQVEILSQDHTTGHG*VCEQSIKLVLPEEA Trigger: AGCTTCCTCAGGGAGAACAAGTTTGATGCTCTGTTCACAGACCCAGCCATGCCCTGTGGTGTGATCCTGGCTGAGTATCTCAACCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 90 bp	GGACACAGGGCTTGGGCTTTGACCAAGCATGTGTTCCAGAGAGCATaGGAAACCTCTGAAGAGGTAGACAGAGGGCAGGTTGAGATACTC	+
Preference number: 5 (lower is better) Translates to: GHRAWALTKHVFQRA*ETSEEVDRGQVEIL Trigger: GAGTATCTCAACCTGCCCTCTGTCTACCTCTTCAGAGGTTTCCCATGCTCTCTGGAACACATGCTTGGTCAAAGCCCAAGCCCTGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS GCA 90 bp	ACTTCTGGCACTAGGACCACAATGTCATGTCCTCGTTCACTGAGATaGTCCACTATCTCCTTCATGCTAAGCCAGTGGCTTCCATCCTGG	+
Preference number: 5 (lower is better) Translates to: TSGTRTTMSCPRSLR*STISFMLSQWLPSW Trigger: CCAGGATGGAAGCCACTGGCTTAGCATGAAGGAGATAGTGGAGCATCTCAGTGAACGAGGACATGACATTGTGGTCCTAGTGCCAGAAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 90 bp	GGATATTCGAACACAAAATCGTACCGTAACAGCCACAGAGAATTCTaGTGTAAGGAAGGTAGGGACACATCTCTCTTGAGGAGGTCTGTG	+
Preference number: 5 (lower is better) Translates to: GYSNTKSYRNSHREF*CKEGRDTSLLRRSV Trigger: CACAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCTGTTACGGTACGATTTTGTGTTCGAATATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CAA 72 bp	CAGGGCATGGCTGGGTCTGTGAACAGAGCATCAAACTaGTTCTCCCTGAGGAAGCTGAGGGTGGCAGAGTCC	+
Preference number: 6 (lower is better) Translates to: QGMAGSVNRASN*FSLRKLRVAES Trigger: GGACTCTGCCACCCTCAGCTTCCTCAGGGAGAACAAGTTTGATGCTCTGTTCACAGACCCAGCCATGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	GAGATACTCAGCCAGGATCACACCACAGGGCATGGCTaGGTCTGTGAACAGAGCATCAAACTTGTTCTCCCT	+
Preference number: 6 (lower is better) Translates to: EILSQDHTTGHG*VCEQSIKLVLP Trigger: AGGGAGAACAAGTTTGATGCTCTGTTCACAGACCCAGCCATGCCCTGTGGTGTGATCCTGGCTGAGTATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CAA 72 bp	GTAGAATCTGGGCACATAGGACACAGGGCTTGGGCTTaGACCAAGCATGTGTTCCAGAGAGCATGGGAAACC	+
Preference number: 6 (lower is better) Translates to: VESGHIGHRAWA*TKHVFQRAWET Trigger: GGTTTCCCATGCTCTCTGGAACACATGCTTGGTCAAAGCCCAAGCCCTGTGTCCTATGTGCCCAGATTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CAA 90 bp	CTGAGGAAGCTGAGGGTGGCAGAGTCCTTCAGGAGGCTCTGGCAGTaGGAAAAGAACATCTCCAATGTAAGCATGCTGTTCCTGTACTCT	+
Preference number: 6 (lower is better) Translates to: LRKLRVAESFRRLWQ*EKNISNVSMLFLYS Trigger: AGAGTACAGGAACAGCATGCTTACATTGGAGATGTTCTTTTCCAACTGCCAGAGCCTCCTGAAGGACTCTGCCACCCTCAGCTTCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	TTTGGTGTAGAATCTGGGCACATAGGACACAGGGCTTaGGCTTTGACCAAGCATGTGTTCCAGAGAGCATGG	+
Preference number: 6 (lower is better) Translates to: FGVESGHIGHRA*ALTKHVFQRAW Trigger: CCATGCTCTCTGGAACACATGCTTGGTCAAAGCCCAAGCCCTGTGTCCTATGTGCCCAGATTCTACACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	CCAGCCGTTGGGGAAATGTCATGTGGTCTGAGAATTTaGTGTAGAATCTGGGCACATAGGACACAGGGCTTG	+
Preference number: 6 (lower is better) Translates to: PAVGEMSCGLRI*CRIWAHRTQGL Trigger: CAAGCCCTGTGTCCTATGTGCCCAGATTCTACACCAAATTCTCAGACCACATGACATTTCCCCAACGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	TCTGAGGAATTCTGCCCAAAGCCTCAGCAATTTCCATaGCTTTCTTCTCCGGAATCTCTGAGACCATGGATC	+
Preference number: 6 (lower is better) Translates to: SEEFCPKPQQFP*LSSPESLRPWI Trigger: GATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	CCATTTGACAAGAATTGTGTTCTTTGCAAGATTCGATaGTCTAGTTCCGGTGTAGCGCCACAGGACCGTCTG	+
Preference number: 6 (lower is better) Translates to: PFDKNCVLCKIR*SSSGVAPQDRL Trigger: CAGACGGTCCTGTGGCGCTACACCGGAACTAGACCATCGAATCTTGCAAAGAACACAATTCTTGTCAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CCA 72 bp	AACACAAAATCGTACCGTAACAGCCACAGAGAATTCTaGTGTAAGGAAGGTAGGGACACATCTCTCTTGAGG	+
Preference number: 6 (lower is better) Translates to: NTKSYRNSHREF*CKEGRDTSLLR Trigger: CCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCTGTTACGGTACGATTTTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CAA 90 bp	AGCCACAGAGAATTCTGGTGTAAGGAAGGTAGGGACACATCTCTCTaGAGGAGGTCTGTGACAATGATTTCATACTTTGAATACAGACAA	+
Preference number: 6 (lower is better) Translates to: SHREFWCKEGRDTSL*RRSVTMISYFEYRQ Trigger: TTGTCTGTATTCAAAGTATGAAATCATTGTCACAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTCTCTGTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8
CDS CAA 72 bp	GAATTCTGGTGTAAGGAAGGTAGGGACACATCTCTCTaGAGGAGGTCTGTGACAATGATTTCATACTTTGAA	+
Preference number: 6 (lower is better) Translates to: EFWCKEGRDTSL*RRSVTMISYFE Trigger: TTCAAAGTATGAAATCATTGTCACAGACCTCCTCAAGAGAGATGTGTCCCTACCTTCCTTACACCAGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113137.2 ENSMUST00000113138.8

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