Pregenerated sensors for UGT1A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089943Ensembl transcript IDs: ENSMUST00000097659.5
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCCAAAGCCTCAGCAATTTCCATGGCTTTCTTCTCCGGAATCTCTaGGACCATGGATCCCAAAGAGAAAACAACGATGCCATGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: AQSLSNFHGFLLRNL*DHGSQRENNDAMLP Trigger: GGGGAGCATGGCATCGTTGTTTTCTCTTTGGGATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097659.5 |
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| CDS GCA 90 bp | ACATCAAAGGAGCTGGAATTCAGGTGGTGGAGCAGGGACTCGTTGTaGAATATATTTGTACAAGTCTTTAAGAGAACGGTTGACATGTTT | + |
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Preference number: 5 (lower is better) Translates to: TSKELEFRWWSRDSL*NIFVQVFKRTVDMF Trigger: AAACATGTCAACCGTTCTCTTAAAGACTTGTACAAATATATTGCACAACGAGTCCCTGCTCCACCACCTGAATTCCAGCTCCTTTGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097659.5 |
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| CDS CAA 72 bp | AAGGAGCTGGAATTCAGGTGGTGGAGCAGGGACTCGTaGTGCAATATATTTGTACAAGTCTTTAAGAGAACG | + |
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Preference number: 6 (lower is better) Translates to: KELEFRWWSRDS*CNIFVQVFKRT Trigger: CGTTCTCTTAAAGACTTGTACAAATATATTGCACAACGAGTCCCTGCTCCACCACCTGAATTCCAGCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097659.5 |
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| CDS CAA 90 bp | ACTACATCAAAGGAGCTGGAATTCAGGTGGTGGAGCAGGGACTCGTaGTGCAATATATTTGTACAAGTCTTTAAGAGAACGGTTGACATG | + |
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Preference number: 6 (lower is better) Translates to: TTSKELEFRWWSRDS*CNIFVQVFKRTVDM Trigger: CATGTCAACCGTTCTCTTAAAGACTTGTACAAATATATTGCACAACGAGTCCCTGCTCCACCACCTGAATTCCAGCTCCTTTGATGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097659.5 |
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| CDS CAA 72 bp | AAACACTTTAAGGTTTTCCATCATTTCTTCCAATTCTaGTCTTGTATAGGGAACGGCATAGACTTTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KHFKVFHHFFQF*SCIGNGIDFES Trigger: ACTTTCAAAGTCTATGCCGTTCCCTATACAAGACAAGAATTGGAAGAAATGATGGAAAACCTTAAAGTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097659.5 |
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