Pregenerated sensors for UGT1A10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090165

Ensembl transcript IDs: ENSMUST00000113142.10, ENSMUST00000138182.8, ENSMUST00000173325.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	CTGGCGGGAGCAGGGGAAACTGTGGGGCTGTCACTGAAAGCAGAGTaGCAGACTTTCTGTAAATTACCAACAGATGGCAAGAGTTGTCTA	+
Preference number: 1 (lower is better) Translates to: LAGAGETVGLSLKAE*QTFCKLPTDGKSCL Trigger: TAGACAACTCTTGCCATCTGTTGGTAATTTACAGAAAGTCTGGCACTCTGCTTTCAGTGACAGCCCCACAGTTTCCCCTGCTCCCGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113142.10
CDS CCA 90 bp	ACAGGACCGTCTGAGGAATTCTGCCCAAAGCCTCAGCAATTTCCATaGCTTTCTTCTCCGGAATCTCTGAGACCATGGATCCCAAAGAGA	+
Preference number: 5 (lower is better) Translates to: TGPSEEFCPKPQQFP*LSSPESLRPWIPKR Trigger: TCTCTTTGGGATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCAGACGGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113142.10 ENSMUST00000138182.8 ENSMUST00000173325.2
CDS TCA 72 bp	AAGAGAAAACAACGATGCCATGCTCCCCAGAGGCGTTaGCATAGGCTTCAAATTCCTTGGAAAGTGGCTTCC	+
Preference number: 6 (lower is better) Translates to: KRKQRCHAPQRR*HRLQIPWKVAS Trigger: GGAAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113142.10 ENSMUST00000173325.2
CDS CCA 72 bp	AGAGGCGTTGACATAGGCTTCAAATTCCTTGGAAAGTaGCTTCCCCTGGAGACAGTTCATCCCACCAACAAA	+
Preference number: 6 (lower is better) Translates to: RGVDIGFKFLGK*LPLETVHPTNK Trigger: TTTGTTGGTGGGATGAACTGTCTCCAGGGGAAGCCACTTTCCAAGGAATTTGAAGCCTATGTCAACGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113142.10 ENSMUST00000173325.2

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