Pregenerated sensors for UGP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001891Ensembl transcript IDs: ENSMUST00000060895.6, ENSMUST00000102875.11
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAAAAGACATGCTCTACTTTGACCTGCTCACCCCTTCCTTCCTCTaGGCAAACAGTTTGATGAAATGTGTACAGCACGGCAGGTATCCC | + |
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Preference number: 1 (lower is better) Translates to: VKDMLYFDLLTPSFL*ANSLMKCVQHGRYP Trigger: GGGATACCTGCCGTGCTGTACACATTTCATCAAACTGTTTGCCCAGAGGAAGGAAGGGGTGAGCAGGTCAAAGTAGAGCATGTCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR TCA 90 bp | AATATTTCTTGGCTAGAAAGGCACACATCTAACCACCAGTGGACCTaGTTGCAAAGGTTATCAGTATTTCTGAGTGGCAACAGAGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: NISWLERHTSNHQWT*LQRLSVFLSGNRVL Trigger: TAACACTCTGTTGCCACTCAGAAATACTGATAACCTTTGCAATCAGGTCCACTGGTGGTTAGATGTGTGCCTTTCTAGCCAAGAAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR-3UTR GCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTGCTCTACTTTGACCTaGTCACCCCTTCCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNCSTLT*SPLPSS Trigger: AGAGGAAGGAAGGGGTGAGCAGGTCAAAGTAGAGCA...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTaGAGGATCTACAGAACTGGCCCGATTCTGAGGTTAAGTAATATT | + |
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Preference number: 2 (lower is better) Translates to: FEIGGNSKGQSLKLL*RIYRTGPILRLSNI Trigger: AATATTACTTAACCTCAGAATCGGGCCAGTTCTGTAGATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| 3UTR-3UTR TCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTGCATTTCACAAGAGTaGGCACTAGACAGCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNCISQE*ALDSKS Trigger: ACTTTTGCTGTCTAGTGCTCACTCTTGTGAAATGCA...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR CAA 90 bp | GACTGGCTAGTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTaGGAGCAAGAGTACTTGACTTTTTCTGCATTTCACAAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DWLVIKLQEQTFLFM*EQEYLTFSAFHKSE Trigger: CTCACTCTTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCACTAGCCAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR CCA 72 bp | ATGCTCTACTTTGACCTGCTCACCCCTTCCTTCCTCTaGGCAAACAGTTTGATGAAATGTGTACAGCACGGC | + |
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Preference number: 3 (lower is better) Translates to: MLYFDLLTPSFL*ANSLMKCVQHG Trigger: GCCGTGCTGTACACATTTCATCAAACTGTTTGCCCAGAGGAAGGAAGGGGTGAGCAGGTCAAAGTAGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR TCA 72 bp | TGCAGGAAACAAGGATGTAAAAGACATGCTCTACTTTaGCCTGCTCACCCCTTCCTTCCTCTGGGCAAACAG | + |
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Preference number: 3 (lower is better) Translates to: CRKQGCKRHALL*PAHPFLPLGKQ Trigger: CTGTTTGCCCAGAGGAAGGAAGGGGTGAGCAGGTCAAAGTAGAGCATGTCTTTTACATCCTTGTTTCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR TCA 72 bp | AACAAACCTTCCTGTTTATGTTGGAGCAAGAGTACTTaGCTTTTTCTGCATTTCACAAGAGTGAGCACTAGA | + |
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Preference number: 3 (lower is better) Translates to: NKPSCLCWSKST*LFLHFTRVSTR Trigger: TCTAGTGCTCACTCTTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR GCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGGCCTTTGCAGCCCATaGTGGTTCCCAAACCACCAT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIGLCSP*WFPNHH Trigger: ATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTGTGCTTTGGGCACTTaGGCGATTTCCACCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRICALGT*AISTSL Trigger: GAGACTGGTGGAAATCGCTCAAGTGCCCAAAGCACA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCATCTCCTGAAACAGTaGGGTGGTCCAGTTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIHLLKQ*GGPVPA Trigger: TGCTGGAACTGGACCACCTCACTGTTTCAGGAGATG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCACAGCGCTTCCCATTaGGTGGGTTCATCAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIHSASH*VGSSGD Trigger: ATCACCTGATGAACCCACCCAATGGGAAGCGCTGTG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR GCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACGGCCTTTGCAGCCCATaGTGGTTCCCAAACCACCAT | + |
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Preference number: 4 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNGLCSP*WFPNHH Trigger: ATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCC...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGATATCTCCATGCCCTaGAGGGTACCAAGCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIDISMP*RVPSFS Trigger: ACTGAAGCTTGGTACCCTCCAGGGCATGGAGATATC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCCTGAAACAGTGAGGTaGTCCAGTTCCAGCATATCG | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIPETVR*SSSSIS Trigger: CGATATGCTGGAACTGGACCACCTCACTGTTTCAGG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCAGTTTGCCTTCATACTaGGTGAGTGTCCCACCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRISLPSY*VSVPPL Trigger: TAAGGGTGGGACACTCACTCAGTATGAAGGCAAACT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCAAATGTCACATCTCCTaGAACAGTGAGGTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIKCHIS*NSEVVQ Trigger: CTGGACCACCTCACTGTTTCAGGAGATGTGACATTT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTCTTCTGGAGGTCTCTaGATTTTACCCCAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRISSGGL*ILPQST Trigger: TGTGGACTGGGGTAAAATCCAGAGACCTCCAGAAGA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCATCAACGTGTGCTTTaGGCACTTGAGCGATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIHQRVL*ALERFP Trigger: TGGAAATCGCTCAAGTGCCCAAAGCACACGTTGATG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR GCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCATGGTCAGAGATCCTaGGTTAAGGCTATAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIHGQRS*VKAIEV Trigger: AACCTCTATAGCCTTAACGCAGGATCTCTGACCATG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCCCTGAAACAGTGAGGTaGTCCAGTTCCAGCATATCG | + |
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Preference number: 4 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFPETVR*SSSSIS Trigger: CGATATGCTGGAACTGGACCACCTCACTGTTTCAGG...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGGTACCTGCTTTGATTaGAGGTGTAGATTTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIGTCFD*RCRFSH Trigger: GTGTGAAAATCTACACCTTCAATCAAAGCAGGTACC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCATGGCATTCTGTTCCTaGAGTCTTTTAACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIMAFCS*SLLTAP Trigger: TGGAGCAGTTAAAAGACTTCAGGAACAGAATGCCAT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCACTGCAGTTTCTAACTaGATTACATTCAGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRITAVSN*ITFRPP Trigger: TGGAGGCCTGAATGTAATTCAGTTAGAAACTGCAGT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCAAGGCTATAGAGGTTTaGCATCACAAGCAAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIKAIEV*HHKQEI Trigger: GATCTCTTGCTTGTGATGTCAAACCTCTATAGCCTT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACAAATGTCACATCTCCTaGAACAGTGAGGTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNKCHIS*NSEVVQ Trigger: CTGGACCACCTCACTGTTTCAGGAGATGTGACATTT...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGCAAGAGATCTGATGTaGTTTTCACAGGCAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIARDLM*FSQAEN Trigger: GTTTTCTGCCTGTGAAAACCACATCAGATCTCTTGC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR GCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCCTCGAAACTTTTAATTaGAGCTCCAACTGCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRILETFN*SSNCSF Trigger: GAAACTGCAGTTGGAGCTGCAATTAAAAGTTTCGAG...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTTGAATCGAATCTTCTaGAGGTCTCTGGATTTTACC | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRILNRIF*RSLDFT Trigger: GGTAAAATCCAGAGACCTCCAGAAGATTCGATTCAA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTATCAGGCAAGCCTCTaGCTTTTATCTTTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIYQASL*LLSFHR Trigger: CCTATGAAAAGATAAAAGCCAGAGGCTTGCCTGATA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCATTTTCACACGACAGTaGTTGTACTTCTGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIIFTRQ*LYFWSI Trigger: AATACTCCAGAAGTACAATCACTGTCGTGTGAAAAT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | GACTGGCTAGTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTTGGAGCAAATGGCATTCTGTTCCTaGAGTCTTTTAACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: DWLVIKLQEQTFLFMLEQMAFCS*SLLTAP Trigger: TGGAGCAGTTAAAAGACTTCAGGAACAGAATGCCAT...TTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCACTAGCCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTCTTTGGATTCACAATaGTTTCCATGTCAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRISLDSQ*FPCQWH Trigger: ATGCCATTGACATGGAAATCATTGTGAATCCAAAGA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | GACTGGCTAGTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTTGGAGCAAACTGCAGTTTCTAACTaGATTACATTCAGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: DWLVIKLQEQTFLFMLEQTAVSN*ITFRPP Trigger: TGGAGGCCTGAATGTAATTCAGTTAGAAACTGCAGT...TTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCACTAGCCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTATAAAGATCCACTGTaGCACCCAGATTATCTATGT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIYKDPL*HPDYLC Trigger: ACATAGATAATCTGGGTGCCACAGTGGATCTTTATA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGTTTATGTTGGAGCAAGAGTACTTGACTTTTTCTGCATTTCACAACATCAACGTGTGCTTTaGGCACTTGAGCGATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NLPVYVGARVLDFFCISQHQRVL*ALERFP Trigger: TGGAAATCGCTCAAGTGCCCAAAGCACACGTTGATG...TTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR GCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACCTCGAAACTTTTAATTaGAGCTCCAACTGCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNLETFN*SSNCSF Trigger: GAAACTGCAGTTGGAGCTGCAATTAAAAGTTTCGAG...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTATCAGGCAAGCCTCTaGCTTTTATCTTTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNYQASL*LLSFHR Trigger: CCTATGAAAAGATAAAAGCCAGAGGCTTGCCTGATA...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTCCATCCAATGTCTTTaGATTCACAATGATTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FEIGGNSKGQSLKLLLRISIQCL*IHNDFH Trigger: ATGGAAATCATTGTGAATCCAAAGACATTGGATGGA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGTTTATGTTGGAGCAAGAGTACTTGACTTTTTCTGCATTTCACAAAAGGCTATAGAGGTTTaGCATCACAAGCAAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: NLPVYVGARVLDFFCISQKAIEV*HHKQEI Trigger: GATCTCTTGCTTGTGATGTCAAACCTCTATAGCCTT...TTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCTATAAAGATCCACTGTaGCACCCAGATTATCTATGT | + |
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Preference number: 4 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFYKDPL*HPDYLC Trigger: ACATAGATAATCTGGGTGCCACAGTGGATCTTTATA...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CCA 90 bp | GACTGGCTAGTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTTGGAGCAATCCATCCAATGTCTTTaGATTCACAATGATTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: DWLVIKLQEQTFLFMLEQSIQCL*IHNDFH Trigger: ATGGAAATCATTGTGAATCCAAAGACATTGGATGGA...TTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCACTAGCCAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| 3UTR CAA 72 bp | GTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTaGGAGCAAGAGTACTTGACTTTTTCTGCATTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VIKLQEQTFLFM*EQEYLTFSAFH Trigger: GTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGTTTATGTTGGAGCAAGAGTACTTGACTTTTTCTGCATTTCACAAATTTTCACACGACAGTaGTTGTACTTCTGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: NLPVYVGARVLDFFCISQIFTRQ*LYFWSI Trigger: AATACTCCAGAAGTACAATCACTGTCGTGTGAAAAT...TTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGTTTATGTTGGAGCAAGAGTACTTGACTTTTTCTGCATTTCACAATCTTTGGATTCACAATaGTTTCCATGTCAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NLPVYVGARVLDFFCISQSLDSQ*FPCQWH Trigger: ATGCCATTGACATGGAAATCATTGTGAATCCAAAGA...TTGTGAAATGCAGAAAAAGTCAAGTACTCTTGCTCCAACATAAACAGGAAGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCAGACTTTTAGGGCCTTaGCAGCCCATGCTGGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIRLLGP*QPMLVP Trigger: GGGAACCAGCATGGGCTGCAAAGGCCCTAAAAGTCT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGTGTGCTTTGGGCACTaGAGCGATTTCCACCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIVCFGH*SDFHQS Trigger: AGACTGGTGGAAATCGCTCAAGTGCCCAAAGCACAC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCGTTCCCAAACCACCATaGAGTTTCACTACCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIVPKPP*SFTTTN Trigger: GTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAAC...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCGTGTGCTTTGGGCACTaGAGCGATTTCCACCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFVCFGH*SDFHQS Trigger: AGACTGGTGGAAATCGCTCAAGTGCCCAAAGCACAC...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCGTTCCCAAACCACCATaGAGTTTCACTACCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFVPKPP*SFTTTN Trigger: GTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAAC...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCACATCTGCTCGTGTTTaGTTTGTGACTTCCATGACA | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRITSARV*FVTSMT Trigger: TGTCATGGAAGTCACAAACAAAACACGAGCAGATGT...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTTTCCAGATACAATCTaGTTCTCTAACACGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIFPDTI*FSNTAP Trigger: AGGAGCCGTGTTAGAGAACAAGATTGTATCTGGAAA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CCA 90 bp | CCACCAACTTGTTCAACACAGAAGATATGTTATCAGGCAAGCCTCTaGCTTTTATCTTTTCATAGGGTTGAATCGAATCTTCTGGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PPTCSTQKICYQASL*LLSFHRVESNLLEV Trigger: GACCTCCAGAAGATTCGATTCAACCCTATGAAAAGATAAAAGCCAGAGGCTTGCCTGATAACATATCTTCTGTGTTGAACAAGTTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTGAAATCGGAGGCAATTCAAAGGGACAGTCACTGAAGCTTCTCTTGAGGATCTATCTTTTCATAGGGTaGAATCGAATCTTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FEIGGNSKGQSLKLLLRIYLFIG*NRIFWR Trigger: CCTCCAGAAGATTCGATTCAACCCTATGAAAAGATA...GATCCTCAAGAGAAGCTTCAGTGACTGTCCCTTTGAATTGCCTCCGATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCCTGAGAAGCACCATCTaGAGACATAGCTTTGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFLRSTI*RHSFAK Trigger: CTTAGCAAAGCTATGTCTCAAGATGGTGCTTCTCAG...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | GTATTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACACATCTGCTCGTGTTTaGTTTGTGACTTCCATGACA | + |
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Preference number: 5 (lower is better) Translates to: VFLSGNRVLRTEAVMRGNTSARV*FVTSMT Trigger: TGTCATGGAAGTCACAAACAAAACACGAGCAGATGT...GTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGTGGCAACAGAGTGTTAAGAACTGAAGCTGTAATGAGAGGTAACTTCTTTCCAGATACAATCTaGTTCTCTAACACGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FLSGNRVLRTEAVMRGNFFPDTI*FSNTAP Trigger: AGGAGCCGTGTTAGAGAACAAGATTGTATCTGGAAA...GAAGTTACCTCTCATTACAGCTTCAGTTCTTAACACTCTGTTGCCACTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS-3UTR CAA 90 bp | GACTGGCTAGTGATAAAACTGCAAGAACAAACCTTCCTGTTTATGTTGGAGCAATATCTTTTCATAGGGTaGAATCGAATCTTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: DWLVIKLQEQTFLFMLEQYLFIG*NRIFWR Trigger: CCTCCAGAAGATTCGATTCAACCCTATGAAAAGATA...TTGCTCCAACATAAACAGGAAGGTTTGTTCTTGCAGTTTTATCACTAGCCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102875.11 |
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| CDS TCA 90 bp | GAATTCTCGAAACTTTTAATTGCAGCTCCAACTGCAGTTTCTAACTaGATTACATTCAGGCCTCCATCCAATGTCTTTGGATTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: EFSKLLIAAPTAVSN*ITFRPPSNVFGFTM Trigger: CATTGTGAATCCAAAGACATTGGATGGAGGCCTGAATGTAATTCAGTTAGAAACTGCAGTTGGAGCTGCAATTAAAAGTTTCGAGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 72 bp | GGGCCTTTGCAGCCCATGCTGGTTCCCAAACCACCATaGAGTTTCACTACCACCAACTTGTTCAACACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GPLQPMLVPKPP*SFTTTNLFNTE Trigger: TTCTGTGTTGAACAAGTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS TCA 72 bp | ACAGACTTGAACTCATCAACGTGTGCTTTGGGCACTTaGGCGATTTCCACCAGTCTCAGTTTGCCTTCATAC | + |
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Preference number: 6 (lower is better) Translates to: TDLNSSTCALGT*AISTSLSLPSY Trigger: GTATGAAGGCAAACTGAGACTGGTGGAAATCGCTCAAGTGCCCAAAGCACACGTTGATGAGTTCAAGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 72 bp | CACAGACTTGAACTCATCAACGTGTGCTTTGGGCACTaGAGCGATTTCCACCAGTCTCAGTTTGCCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: HRLELINVCFGH*SDFHQSQFAFI Trigger: TATGAAGGCAAACTGAGACTGGTGGAAATCGCTCAAGTGCCCAAAGCACACGTTGATGAGTTCAAGTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 90 bp | CCCATGCTGGTTCCCAAACCACCATTGAGTTTCACTACCACCAACTaGTTCAACACAGAAGATATGTTATCAGGCAAGCCTCTGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PMLVPKPPLSFTTTN*FNTEDMLSGKPLAF Trigger: AAAAGCCAGAGGCTTGCCTGATAACATATCTTCTGTGTTGAACAAGTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 72 bp | TTCTCATTTCTTACACCAATCAGACTTTTAGGGCCTTaGCAGCCCATGCTGGTTCCCAAACCACCATTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FSFLTPIRLLGP*QPMLVPKPPLS Trigger: ACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCCCTAAAAGTCTGATTGGTGTAAGAAATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 90 bp | AGACTTTTAGGGCCTTTGCAGCCCATGCTGGTTCCCAAACCACCATaGAGTTTCACTACCACCAACTTGTTCAACACAGAAGATATGTTA | + |
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Preference number: 6 (lower is better) Translates to: RLLGPLQPMLVPKPP*SFTTTNLFNTEDML Trigger: TAACATATCTTCTGTGTTGAACAAGTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCCCTAAAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 90 bp | AAAAAGGTGTTCTCATTTCTTACACCAATCAGACTTTTAGGGCCTTaGCAGCCCATGCTGGTTCCCAAACCACCATTGAGTTTCACTACC | + |
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Preference number: 6 (lower is better) Translates to: KKVFSFLTPIRLLGP*QPMLVPKPPLSFTT Trigger: GGTAGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGCCCTAAAAGTCTGATTGGTGTAAGAAATGAGAACACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CCA 72 bp | GACTTCCATGACAAACTCACAGCGCTTCCCATTGGGTaGGTTCATCAGGTGATTAAGAATATAAAGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: DFHDKLTALPIG*VHQVIKNIKIH Trigger: GTGGATCTTTATATTCTTAATCACCTGATGAACCCACCCAATGGGAAGCGCTGTGAGTTTGTCATGGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CAA 72 bp | GTTCCCAAACCACCATTGAGTTTCACTACCACCAACTaGTTCAACACAGAAGATATGTTATCAGGCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VPKPPLSFTTTN*FNTEDMLSGKP Trigger: AGGCTTGCCTGATAACATATCTTCTGTGTTGAACAAGTTGGTGGTAGTGAAACTCAATGGTGGTTTGGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS TCA 72 bp | AAACTTTTAATTGCAGCTCCAACTGCAGTTTCTAACTaGATTACATTCAGGCCTCCATCCAATGTCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KLLIAAPTAVSN*ITFRPPSNVFG Trigger: TCCAAAGACATTGGATGGAGGCCTGAATGTAATTCAGTTAGAAACTGCAGTTGGAGCTGCAATTAAAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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| CDS CCA 72 bp | TGTTCAACACAGAAGATATGTTATCAGGCAAGCCTCTaGCTTTTATCTTTTCATAGGGTTGAATCGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: CSTQKICYQASL*LLSFHRVESNL Trigger: AAGATTCGATTCAACCCTATGAAAAGATAAAAGCCAGAGGCTTGCCTGATAACATATCTTCTGTGTTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060895.6 ENSMUST00000102875.11 |
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