Pregenerated sensors for UGGT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042104Ensembl transcript IDs: ENSMUST00000127153.2, ENSMUST00000153693.8, ENSMUST00000156203.8, ENSMUST00000173391.2
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGGTGGGACTCTGGGATGTCCAGGAACTTTGCCACTGGCCCATaGGAAGGACGATTGTTAGGCCCTGATGTCAGCTCTGGCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RRWDSGMSRNFATGP*EGRLLGPDVSSGSR Trigger: TCTGGAGCCAGAGCTGACATCAGGGCCTAACAATCGTCCTTCTCATGGGCCAGTGGCAAAGTTCCTGGACATCCCAGAGTCCCACCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 90 bp | GCCGGCCCATCTCTAGGTGAGGAACTGGGCAGCCACCAGGCTCTATaGGCTGTTTCTCAAGGATCTGGAGAGCTTTTTAAACAGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AGPSLGEELGSHQAL*AVSQGSGELFKQEE Trigger: CTCCTCCTGTTTAAAAAGCTCTCCAGATCCTTGAGAAACAGCTCATAGAGCCTGGTGGCTGCCCAGTTCCTCACCTAGAGATGGGCCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 90 bp | GATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATCCCTaGGATGTATACAGCCCAGCACACACATGTAGCCAAGGGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: DAASPAMLGLSQNYP*DVYSPAHTCSQGAT Trigger: TGTAGCCCCTTGGCTACATGTGTGTGCTGGGCTGTATACATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR TCA 90 bp | TCACTATTGTGTCAACTACAACAGGATTGCTTCTTGTGCCCAGCGTaGACTGCAGACCCTGTGGGGGCTGTTCTGTGGTCATGTCGAAGC | + |
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Preference number: 1 (lower is better) Translates to: SLLCQLQQDCFLCPA*TADPVGAVLWSCRS Trigger: GCTTCGACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGTAGTTGACACAATAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
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| 3UTR TCA 90 bp | TCTGTAGACCAGGCTTGCCTTGAACTCAAGAGATCCACCTGTCCCTaGCTCCTGAGTGCTAGGATTAAAGGTGTGCACAACCACCACCCA | + |
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Preference number: 1 (lower is better) Translates to: SVDQACLELKRSTCP*LLSARIKGVHNHHP Trigger: TGGGTGGTGGTTGTGCACACCTTTAATCCTAGCACTCAGGAGTCAGGGACAGGTGGATCTCTTGAGTTCAAGGCAAGCCTGGTCTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR GCA 90 bp | CCGTGGTTACATGGGACCTGTCAGAGGTGTCCATTCTTTTCCTACTaGAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: PWLHGTCQRCPFFSY*NMMLHLLPCWALVR Trigger: TCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAGGAAAAGAATGGACACCTCTGACAGGTCCCATGTAACCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR GCA 90 bp | ATTGTGTCAACTACAACAGGATTGCTTCTTGTGCCCAGCGTGAACTaGAGACCCTGTGGGGGCTGTTCTGTGGTCATGTCGAAGCAATGT | + |
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Preference number: 1 (lower is better) Translates to: IVSTTTGLLLVPSVN*RPCGGCSVVMSKQC Trigger: ACATTGCTTCGACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGTAGTTGACACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
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| 3UTR CCA 90 bp | ATCAAGGTCACAGTTGCTATGTACTGTTTCAACCAGCCATCCTTCTaGGGTGATCATGTTGAGAGTCAGAAGGTGGGACTCTGGGATGTC | + |
|
Preference number: 1 (lower is better) Translates to: IKVTVAMYCFNQPSF*GDHVESQKVGLWDV Trigger: GACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGTGACCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CCA 90 bp | TCTCAAGGATCTGGAGAGCTTTTTAAACAGGAGGAGGAATTCCCGTaGTTACATGGGACCTGTCAGAGGTGTCCATTCTTTTCCTACTGC | + |
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Preference number: 1 (lower is better) Translates to: SQGSGELFKQEEEFP*LHGTCQRCPFFSYC Trigger: GCAGTAGGAAAAGAATGGACACCTCTGACAGGTCCCATGTAACCACGGGAATTCCTCCTCCTGTTTAAAAAGCTCTCCAGATCCTTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR TCA 90 bp | TGTTATCCCACTTGGGGTTGTACAAAGTCAATCCACAGAAAGATGTaGAACGAACAGCCTCTCAGTCATCATCGTCGCTTCTTTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: CYPTWGCTKSIHRKM*NEQPLSHHRRFFGS Trigger: GGACCCAAAGAAGCGACGATGATGACTGAGAGGCTGTTCGTTTCACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGTGGGATAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 90 bp | CTATACCATCAGATACTCAGGATTACAATCTTAATTCTGAAGAGCTaGAAGAAGCCAAGGCACAGAGAACTGCCTCAGTATGGAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: LYHQILRITILILKS*KKPRHRELPQYGIC Trigger: ACAAATTCCATACTGAGGCAGTTCTCTGTGCCTTGGCTTCTTTCAGCTCTTCAGAATTAAGATTGTAATCCTGAGTATCTGATGGTATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCATCACACTTGGGCGGGTaGCATTTAAAAGATACTGAG | + |
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Preference number: 2 (lower is better) Translates to: PSSAEVSLLLLIREEPKASHLGG*HLKDTE Trigger: CTCAGTATCTTTTAAATGTCACCCGCCCAAGTGTGA...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGGGGTGATCATGTTGAGAGTCAGAAGGTGGGACTCTGGGATGTCCAGGAACTGTGCCATCTTCTaGGCTTCTCTTGTCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSGVIMLRVRRWDSGMSRNCAIF*ASLVKG Trigger: TCCTTTGACAAGAGAAGCTCAGAAGATGGCACAGTT...CCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CAA 90 bp | TTGCTATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGATCATGTaGAGAGTCAGAAGGTGGGACTCTGGGATGTCCAGGAACTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLCTVSTSHPSGVIM*RVRRWDSGMSRNFA Trigger: GGCAAAGTTCCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCACCATTCTTTTCCTACTaGAACATGATGCTGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: EGPPTVKREMEPCKRSNPPFFSY*NMMLHL Trigger: GAGATGCAGCATCATGTTGCAGTAGGAAAAGAATGG...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTGGTTCCCAGCAGTGCTaGGGTGAGCCTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CAQPPPSFKSDILCQKLIGSQQC*GEPPPP Trigger: AGGAGGAGGAGGCTCACCTCAGCACTGCTGGGAACC...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTGAGCCCAAAGCAATGTaGGAAAGTGTCCATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: REMEPCKRSNPVKKVIGGEPKAM*ESVHGL Trigger: CAGTCCATGGACACTTTCCCACATTGCTTTGGGCTC...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTACCTTCAAGGACATCTaGGAACATCAAATTAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: REMEPCKRSNPVKKVIGGTFKDI*EHQISW Trigger: CCAGCTAATTTGATGTTCTCAGATGTCCTTGAAGGT...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CAA 90 bp | GGGGGATTTATCTTTATAACATCAGTACTGTTATCCCACTTGGGGTaGTACAAAGTCAATCCACAGAAAGATGTGAAACGAACAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGFIFITSVLLSHLG*YKVNPQKDVKRTAS Trigger: AGAGGCTGTTCGTTTCACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGTGGGATAACAGTACTGATGTTATAAAGATAAATCCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATCATGGACTGAAATCCTaGGTGAAAAACCCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KGVHNHHPASNLIFYVRNHGLKS*VKNPFF Trigger: GAAGAAAGGGTTTTTCACTCAGGATTTCAGTCCATG...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CAA 90 bp | TTCTCTGGGGGATTTATCTTTATAACATCAGTACTGTTATCCCACTaGGGGTTGTACAAAGTCAATCCACAGAAAGATGTGAAACGAACA | + |
|
Preference number: 2 (lower is better) Translates to: FSGGFIFITSVLLSH*GLYKVNPQKDVKRT Trigger: TGTTCGTTTCACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGTGGGATAACAGTACTGATGTTATAAAGATAAATCCCCCAGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTAGGTACTGTCTTAATTaGAATGAGTGGCCAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CAQPPPSFKSDILCQKLIRYCLN*NEWPGE Trigger: TTCCCCTGGCCACTCATTCCAATTAAGACAGTACCT...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CAA 90 bp | GGGTATTATGAATCATCTTTTAAGTTAATATTATCAAGGTCACAGTaGCTATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGATCATG | + |
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Preference number: 2 (lower is better) Translates to: GYYESSFKLILSRSQ*LCTVSTSHPSGVIM Trigger: CATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGTGACCTTGATAATATTAACTTAAAAGATGATTCATAATACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 72 bp | AGTCCCATTCTCTCATCTCATGGTTCCCAGCAGTGCTaGGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SPILSSHGSQQC*GEPPPPHKGGA Trigger: GGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGGAACCATGAGATGAGAGAATGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | ATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTaGGGGCTGTTCTGTGGTCATGTCGAAGCAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: IASCAQRELQTL*GLFCGHVEAMS Trigger: GGACATTGCTTCGACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
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| 3UTR TCA 72 bp | TGTCAACTACAACAGGATTGCTTCTTGTGCCCAGCGTaGACTGCAGACCCTGTGGGGGCTGTTCTGTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CQLQQDCFLCPA*TADPVGAVLWS Trigger: TGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGTAGTTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
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| 3UTR TCA 72 bp | CTCAGTATGGAATTTGTGTACGAACCTGTCCTGAGATaGGCCGGCCCATCTCTAGGTGAGGAACTGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LSMEFVYEPVLR*AGPSLGEELGS Trigger: GCTGCCCAGTTCCTCACCTAGAGATGGGCCGGCTCATCTCAGGACAGGTTCGTACACAAATTCCATACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR GCA 72 bp | CATGGGACCTGTCAGAGGTGTCCATTCTTTTCCTACTaGAACATGATGCTGCATCTCCTGCCATGCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: HGTCQRCPFFSY*NMMLHLLPCWA Trigger: GGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAGGAAAAGAATGGACACCTCTGACAGGTCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | TGGGGTGATCATGTTGAGAGTCAGAAGGTGGGACTCTaGGATGTCCAGGAACTTTGCCACTGGCCCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: WGDHVESQKVGL*DVQELCHWPMR Trigger: TCTCATGGGCCAGTGGCAAAGTTCCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CCA 72 bp | CATCCTTCTGGGGTGATCATGTTGAGAGTCAGAAGGTaGGACTCTGGGATGTCCAGGAACTTTGCCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: HPSGVIMLRVRR*DSGMSRNFATG Trigger: GCCAGTGGCAAAGTTCCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 72 bp | GCCTTGAACTCAAGAGATCCACCTGTCCCTGACTCCTaGGTGCTAGGATTAAAGGTGTGCACAACCACCACC | + |
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Preference number: 3 (lower is better) Translates to: ALNSRDPPVPDS*VLGLKVCTTTT Trigger: GGTGGTGGTTGTGCACACCTTTAATCCTAGCACTCAGGAGTCAGGGACAGGTGGATCTCTTGAGTTCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR TCA 72 bp | CTGTCCTTGAACTCTCTCTGTAGACCAGGCTTGCCTTaGACTCAAGAGATCCACCTGTCCCTGACTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LSLNSLCRPGLP*TQEIHLSLTPE Trigger: CTCAGGAGTCAGGGACAGGTGGATCTCTTGAGTTCAAGGCAAGCCTGGTCTACAGAGAGAGTTCAAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR TCA 72 bp | AGAGGCAGAGTTTCACTGTGTAGGCCTGGCTGTCCTTaGACTCTCTCTGTAGACCAGGCTTGCCTTGAACTC | + |
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Preference number: 3 (lower is better) Translates to: RGRVSLCRPGCP*TLSVDQACLEL Trigger: GAGTTCAAGGCAAGCCTGGTCTACAGAGAGAGTTCAAGGACAGCCAGGCCTACACAGTGAAACTCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | AAACGAACAGCCTCTCAGTCATCATCGTCGCTTCTTTaGGTCCAGGGTCCTCTCTTTACCTCCTTCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: KRTASQSSSSLL*VQGPLFTSFSP Trigger: AGGAGAGAAGGAGGTAAAGAGAGGACCCTGGACCCAAAGAAGCGACGATGATGACTGAGAGGCTGTTCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CCA 72 bp | TCTCCTGCCATGCTGGGCCTTAGTCAGAATTATCCCTaGGATGTATACAGCCCAGCACACACATGTAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: SPAMLGLSQNYP*DVYSPAHTCSQ Trigger: TTGGCTACATGTGTGTGCTGGGCTGTATACATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCAGTTCATGAACAGCTTTATCCTCGCGTTTACAATCTTCCCAAGCACCACATCATCGTCGCTTCTTaGGGTCCAGGGTCCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: PAVHEQLYPRVYNLPKHHIIVAS*GPGSSL Trigger: AAGAGAGGACCCTGGACCCAAAGAAGCGACGATGAT...GTGGTGCTTGGGAAGATTGTAAACGCGAGGATAAAGCTGTTCATGAACTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR-3UTR CAA 90 bp | CGTTGGTCTCGGGTTCTGCTCCTTCATGCCCAGTTATTTCATAAATATCTTCTGGGGGCTTCTGAGAGTTaGCCCCTGCAGTTCATGAAC | + |
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Preference number: 3 (lower is better) Translates to: RWSRVLLLHAQLFHKYLLGASES*PLQFMN Trigger: GTTCATGAACTGCAGGGGCAAACTCTCAGAAGCCCC...CAGAAGATATTTATGAAATAACTGGGCATGAAGGAGCAGAACCCGAGACCAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 72 bp | CTAACGGGGCTTCTGAGAGTTTGCCCCTGCAGTTCATaGACAGCTTTATCCTCGCGTTTACAATCTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LTGLLRVCPCSS*TALSSRLQSSQ Trigger: TTGGGAAGATTGTAAACGCGAGGATAAAGCTGTTCATGAACTGCAGGGGCAAACTCTCAGAAGCCCCGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 72 bp | TCTCTAGGTGAGGAACTGGGCAGCCACCAGGCTCTATaGGCTGTTTCTCAAGGATCTGGAGAGCTTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLGEELGSHQAL*AVSQGSGELFK Trigger: TTTAAAAAGCTCTCCAGATCCTTGAGAAACAGCTCATAGAGCCTGGTGGCTGCCCAGTTCCTCACCTAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | ACAGTTGCTATGTACTGTTTCAACCAGCCATCCTTCTaGGGTGATCATGTTGAGAGTCAGAAGGTGGGACTC | + |
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Preference number: 3 (lower is better) Translates to: TVAMYCFNQPSF*GDHVESQKVGL Trigger: GAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CCA 72 bp | TCCTACTGCAACATGATGCTGCATCTCCTGCCATGCTaGGCCTTAGTCAGAATTATCCCTGGGATGTATACA | + |
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Preference number: 3 (lower is better) Translates to: SYCNMMLHLLPC*ALVRIIPGMYT Trigger: TGTATACATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | AAGGGAGGAGCCCAAAGCAATGTGGGAAAGTGTCCATaGACTGAAATCCTGAGTGAAAAACCCTTTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: KGGAQSNVGKCP*TEILSEKPFLP Trigger: CGGAAGAAAGGGTTTTTCACTCAGGATTTCAGTCCATGGACACTTTCCCACATTGCTTTGGGCTCCTCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR GCA 72 bp | TTTTCCTACTGCAACATGATGCTGCATCTCCTGCCATaGTGGGCCTTAGTCAGAATTATCCCTGGGATGTAT | + |
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Preference number: 3 (lower is better) Translates to: FSYCNMMLHLLP*WALVRIIPGMY Trigger: ATACATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CCA 72 bp | TCTGGAGAGCTTTTTAAACAGGAGGAGGAATTCCCGTaGTTACATGGGACCTGTCAGAGGTGTCCATTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SGELFKQEEEFP*LHGTCQRCPFF Trigger: AAAGAATGGACACCTCTGACAGGTCCCATGTAACCACGGGAATTCCTCCTCCTGTTTAAAAAGCTCTCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR TCA 72 bp | ACTTGGGGTTGTACAAAGTCAATCCACAGAAAGATGTaGAACGAACAGCCTCTCAGTCATCATCGTCGCTTC | + |
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Preference number: 3 (lower is better) Translates to: TWGCTKSIHRKM*NEQPLSHHRRF Trigger: GAAGCGACGATGATGACTGAGAGGCTGTTCGTTTCACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR TCA 72 bp | GCTACAGGTTATACATCTAGATCACACTTGGGCGGGTaGCATTTAAAAGATACTGAGGTATGTTTTAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ATGYTSRSHLGG*HLKDTEVCFSP Trigger: GGGACTAAAACATACCTCAGTATCTTTTAAATGTCACCCGCCCAAGTGTGATCTAGATGTATAACCTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR-3UTR CAA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTCGTAAACTGTTTATTTaGGATAGTCTGTCACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: REMEPCKRSNPVKKVIGGRKLFI*DSLSQR Trigger: TCTCTGTGACAGACTATCCAAAATAAACAGTTTACG...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | TCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTTCTGTGGTCATGTCACGATTGTTAGGCCCTaGTGTCAGCTCTGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCAQRELQTLWGLFCGHVTIVRP*CQLWLQ Trigger: CTGGAGCCAGAGCTGACATCAGGGCCTAACAATCGT...GACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCACACCACAGCCAGTCTTaGGGAAGAGACTTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSAEVSLLLLIREEPKAHHSQS*GRDLMA Trigger: TGCCATCAAGTCTCTTCCTCAAGACTGGCTGTGGTG...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCATTGAGAGTCAGAAGGTaGGACTCTGGGATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSAEVSLLLLIREEPKALRVRR*DSGMSR Trigger: CCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAA...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTTCTGTGGTCATGTCGGCACGCACAGCCAATaGAGACATGAGCCCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCAQRELQTLWGLFCGHVGTHSQ*RHEPIY Trigger: ATAGATGGGCTCATGTCTTCATTGGCTGTGCGTGCC...GACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCAGAGCCTGTCACCTGCTaGGATTCTCCTGAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSAEVSLLLLIREEPKAEPVTC*DSPELL Trigger: AAGAAGTTCAGGAGAATCTCAGCAGGTGACAGGCTC...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGCTGAGAGCTTGGTACTaGCCCCGGAGCCTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITLRAWY*PRSLSP Trigger: AGGTGACAGGCTCCGGGGCCAGTACCAAGCTCTCAG...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATGTGCCCAGCGTGAACTaGAGACCCTGTGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQHDAASPAMLGLSQNYVPSVN*RPCGGC Trigger: ACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCAC...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGGGGGCTGTTCTGTGGTCATGTCGAAGCAATGTCCTTCAAGTAGCAGATGCCCCTGCAGTTCATaGACAGCTTTATCCTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGGCSVVMSKQCPSSSRCPCSS*TALSSR Trigger: ACGCGAGGATAAAGCTGTTCATGAACTGCAGGGGCA...TCTGCTACTTGAAGGACATTGCTTCGACATGACCACAGAACAGCCCCCACAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCAACGATTGTTAGGCCCTaGTGTCAGCTCTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGPPTVKREMEPCKRSNPTIVRP*CQLWLQ Trigger: CTGGAGCCAGAGCTGACATCAGGGCCTAACAATCGT...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | GTCAACTACAACAGGATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGTTGAGAGTCAGAAGGTaGGACTCTGGGATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNYNRIASCAQRELQTLWLRVRR*DSGMSR Trigger: CCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAA...CCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGTAGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR CCA 90 bp | ACAACAGGATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTAACCAGCCATCCTTCTaGGGTGATCATGTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTGLLLVPSVNCRPCGGCNQPSF*GDHVES Trigger: ACTCTCAACATGATCACCCCAGAAGGATGGCTGGTT...ACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| 3UTR CAA 72 bp | GAAACGAACAGCCTCTCAGTCATCATCGTCGCTTCTTaGGGTCCAGGGTCCTCTCTTTACCTCCTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETNSLSVIIVAS*GPGSSLYLLLS Trigger: GGAGAGAAGGAGGTAAAGAGAGGACCCTGGACCCAAAGAAGCGACGATGATGACTGAGAGGCTGTTCGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTTCTGCATGTGCTTTGCTATaGCAGCACTCTTATCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLLLVPSVNCRPCGGCSACALL*QHSYLV Trigger: CACAAGATAAGAGTGCTGTCATAGCAAAGCACATGC...AGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCGGCACGCACAGCCAATaGAGACATGAGCCCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIGTHSQ*RHEPIY Trigger: ATAGATGGGCTCATGTCTTCATTGGCTGTGCGTGCC...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCAAATCCACAGAGTGACTaGAGATATTACAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSAEVSLLLLIREEPKANPQSD*RYYSIF Trigger: GAAGATGCTGTAATATCTCCAGTCACTCTGTGGATT...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTTCTGTGGTCATGTCGAAGTATCAAGGTCACAGTTaGTATGTACTGTTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSVNCRPCGGCSVVMSKYQGHS*YVLFQP Trigger: TGGTTGAAACAGTACATAGCAACTGTGACCTTGATA...CTTCGACATGACCACAGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR CCA 90 bp | CATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATCCCTGGGATCAGGAACTTTGCCACTaGCCCATGAGAAGGACGATT | + |
|
Preference number: 4 (lower is better) Translates to: HDAASPAMLGLSQNYPWDQELCH*PMRRTI Trigger: AATCGTCCTTCTCATGGGCCAGTGGCAAAGTTCCTG...ATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGTGCTGAGGTGAGCCTCCTCCTCCTCATAAGGGAGGAGCCCAAAGCATACCTCTTTAAATGTTaGCGAGAGGTAATTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSAEVSLLLLIREEPKAYLFKC*REVILQ Trigger: CTGAAGAATTACCTCTCGCCAACATTTAAAGAGGTA...TGCTTTGGGCTCCTCCCTTATGAGGAGGAGGAGGCTCACCTCAGCACTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | TACAACAGGATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTCCAAGGTATATTCTTaGGCAGGATCAATGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNRIASCAQRELQTLWGLSKVYS*AGSMNR Trigger: TCTGTTCATTGATCCTGCTCAAGAATATACCTTGGA...CAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTTGTTTGGATCCTGGCTaGGAGCTTGGTACTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: REMEPCKRSNPVKKVIGGCLDPG*ELGTGP Trigger: GGGGCCAGTACCAAGCTCTCAGCCAGGATCCAAACA...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGCGGCTATCGCAAAATaGAGTATATCCATAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSRGSSTGLQQVADFYHAAIAK*SISIRS Trigger: GCTCCTTATGGATATACTCCATTTTGCGATAGCCGC...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | ATCATGTTGAGAGTCAGAAGGTGGGACTCTGGGATGTCCAGGAACTTTGCCACTCAGTGTTCATCTCTTTaGGGTCAAAGGGTTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: IMLRVRRWDSGMSRNFATQCSSL*GQRVHR Trigger: ACGGTGAACCCTTTGACCTCAAAGAGATGAACACTG...AGTGGCAAAGTTCCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTCTTCTGCCAGTCTCCTaGGAAAGCTTCTCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPILLPVS*ESFSSA Trigger: AGCACTTGAGAAGCTTTCTCAGGAGACTGGCAGAAG...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGATTGCTTCTTGTGCCCAGCGTGAACTGCAGACCCTGTGGGGGCTGTTCTTCTGTAGTGAATTACTaGACGTTATCTTTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLLVPSVNCRPCGGCSSVVNY*TLSFPA Trigger: TGCTGGAAAAGATAACGTTCAGTAATTCACTACAGA...AGAACAGCCCCCACAGGGTCTGCAGTTCACGCTGGGCACAAGAAGCAATCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCACAGCATCAACAAATATaGCTTTGTCCACAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGPPTVKREMEPCKRSNPQHQQI*LCPQPV Trigger: CACTGGCTGTGGACAAAGTCATATTTGTTGATGCTG...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGAACATCTGAATGGTTaGAGAGTATGCCCTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTSRGSSTGLQQVADFYHEHLNG*RVCPYG Trigger: TCCATAAGGGCATACTCTCCAACCATTCAGATGTTC...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCTTTGTCCACAGCCAGTaGGAAAAGGACATCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIFVHSQ*EKDIKE Trigger: TTCCTTGATGTCCTTTTCCCACTGGCTGTGGACAAA...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTCTTGTACCAATCTCTaGATAGAGAACAATCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITSCTNL*IENNHW Trigger: CCAGTGATTGTTCTCTATGCAGAGATTGGTACAAGA...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGAAGGAGTCATTTCTTTaGTGCTCTCAATCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITKESFL*CSQSGT Trigger: AGTACCTGATTGAGAGCAGCAAAGAAATGACTCCTT...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTCAGTCTGGGGGCACCACCAGGAACTGTaGCATCTTCTGAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRYSSSYSAVTLLSVWGHHQEL*HLLSFS Trigger: AGAGAAGCTCAGAAGATGGCACAGTTCCTGGTGGTG...CCCCCAGACTGAGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR CCA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCGAGAGTATGCCCTTATaGAGAAGGCAAACTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIESMPL*RRQTLG Trigger: TCCTAAAGTTTGCCTTCTCCATAAGGGCATACTCTC...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGCATCATAAACAGGAGTaGAAACTATTTGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITHHKQE*KLFEWL Trigger: CAGCCACTCAAATAGTTTCCACTCCTGTTTATGATG...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATAACCAGCCATCCTTCTaGGGTGATCATGTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQHDAASPAMLGLSQNYNQPSF*GDHVES Trigger: ACTCTCAACATGATCACCCCAGAAGGATGGCTGGTT...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTCTCGTAGGTCCTTCTaGTTTTCCTGTATTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITSRRSF*FSCISF Trigger: AAAAGAAATACAGGAAAATCAGAAGGACCTACGAGA...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTAACTGTGCCATCTTCTaGGCTTCTCTTGTCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPINCAIF*ASLVKG Trigger: TCCTTTGACAAGAGAAGCTCAGAAGATGGCACAGTT...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCGTAATGCATGTGCTTTaGTATGACAGCACTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIVMHVL*YDSTLI Trigger: GATAAGAGTGCTGTCATAGCAAAGCACATGCATTAC...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACTGTCTGCTTATAAACTaGCAGTTCTCTTACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTSRGSSTGLQQVADFYHCLLIN*QFSYCF Trigger: GAAACAGTAAGAGAACTGGCAGTTTATAAGCAGACA...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTCACCACCAGGAACTGTaGCATCTTCTGAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REMEPCKRSNPVKKVIGGHHQEL*HLLSFS Trigger: AGAGAAGCTCAGAAGATGGCACAGTTCCTGGTGGTG...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | CATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATCCCTGGGATAACAGAACCAAATTATaGAAGTTACGCCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HDAASPAMLGLSQNYPWDNRTKL*KLRLTE Trigger: TTCTGTGAGGCGTAACTTTCATAATTTGGTTCTGTT...ATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCATATCAAGGTCACAGTTaGTATGTACTGTTTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGPPTVKREMEPCKRSNPYQGHS*YVLFQP Trigger: TGGTTGAAACAGTACATAGCAACTGTGACCTTGATA...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGCTTTCATTAACTTTATaGCATCATAAACAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITLSLTL*HHKQEW Trigger: CCACTCCTGTTTATGATGCCATAAAGTTAATGAAAG...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CCA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGGAAAATATCCAAGATTaGCCATCACTATTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVVAVPQVSSRWRIFITENIQD*PSLLCQ Trigger: TTGACACAATAGTGATGGCCAATCTTGGATATTTTC...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| 3UTR CAA 72 bp | TTGAAAGTGTTTAACACGACGATGACATTGCCTACGTaGGTCTCGGGTTCTGCTCCTTCATGCCCAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LKVFNTTMTLPT*VSGSAPSCPVI Trigger: AATAACTGGGCATGAAGGAGCAGAACCCGAGACCAACGTAGGCAATGTCATCGTCGTGTTAAACACTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
||
| 3UTR CAA 72 bp | ATCTTGCTTTTGAAAGTGTTTAACACGACGATGACATaGCCTACGTTGGTCTCGGGTTCTGCTCCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLKVFNTTMT*PTLVSGSAPSC Trigger: GCATGAAGGAGCAGAACCCGAGACCAACGTAGGCAATGTCATCGTCGTGTTAAACACTTTCAAAAGCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000153693.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTTCCAAGGTATATTCTTaGGCAGGATCAATGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPISKVYS*AGSMNR Trigger: TCTGTTCATTGATCCTGCTCAAGAATATACCTTGGA...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTCAGTCTCTTCTGCCAGTCTCCTaGGAAAGCTTCTCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVADILVHTLLSHFSQSLLPVS*ESFSSA Trigger: AGCACTTGAGAAGCTTTCTCAGGAGACTGGCAGAAG...AGACTGAGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAGGTCACAGTTGCTATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGCAGCCAATGAAGACATaGGCCCATCTATTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRSQLLCTVSTSHPSGVQPMKT*AHLFSS Trigger: TGATGAAAATAGATGGGCTCATGTCTTCATTGGCTG...CACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGTGACCTTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCGAACGTATCATTCTCTaGGGGATTTATCTTTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIERIIL*GIYLYN Trigger: GTTATAAAGATAAATCCCCCAGAGAATGATACGTTC...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCATACAAGGCACTGATATaGTATTTCCTTTTAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPPTVKREMEPCKRSNPYKALI*YFLLTR Trigger: CCTTGTTAAAAGGAAATACCATATCAGTGCCTTGTA...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTTCTGTAGTGAATTACTaGACGTTATCTTTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPISVVNY*TLSFPA Trigger: TGCTGGAAAAGATAACGTTCAGTAATTCACTACAGA...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAAGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTCAGTCAGCAGTTTCTTCTTCTaGCAGTCTCCTGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRYSSSYSAVTLLSVSSFFF*QSPEKA Trigger: AGCTTTCTCAGGAGACTGGCAGAAGAAGAAACTGCT...GACTGAGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACTTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR GCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTTTTAACAAGGTGCGATaGCCAGTATCCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REMEPCKRSNPVKKVIGGFNKVR*PVSCFP Trigger: TGGAAAACAGGATACTGGGCATCGCACCTTGTTAAA...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTCCATCATACTTGGAATaGATTCCCAAGATATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPIPSYLE*IPKISK Trigger: TTTGGATATCTTGGGAATCCATTCCAAGTATGATGG...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATAGTTGTCACTGCTTGTaGGAAACTTATGATCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQHDAASPAMLGLSQNYSCHCL*ETYDLF Trigger: AAAGAGATCATAAGTTTCCCACAAGCAGTGACAACT...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATAGACTGTTTGGATCCTaGCTGAGAGCTTGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNRLFGS*LRAWYW Trigger: CCAGTACCAAGCTCTCAGCCAGGATCCAAACAGTCT...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | ATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGATCATGTTGAGAGTCAGAAGAGCACTCTTATCTTGTaGATCCAAGAAAGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MYCFNQPSFWGDHVESQKSTLIL*IQERES Trigger: ACTTTCTCTTTCTTGGATTCACAAGATAAGAGTGCT...CTTCTGACTCTCAACATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR TCA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTTGCCCCTGCAGTTCATaGACAGCTTTATCCTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CAQPPPSFKSDILCQKLICPCSS*TALSSR Trigger: ACGCGAGGATAAAGCTGTTCATGAACTGCAGGGGCA...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTTACTGTGGTTCAGTCTaGAAAATCAGAGAATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPIYCGSV*KIREFN Trigger: GTTAAATTCTCTGATTTTGCAGACTGAACCACAGTA...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | ATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGATCATGTTGAGAGTCAGAAGCCATCATACTTGGAATaGATTCCCAAGATATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MYCFNQPSFWGDHVESQKPSYLE*IPKISK Trigger: TTTGGATATCTTGGGAATCCATTCCAAGTATGATGG...CTTCTGACTCTCAACATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR CCA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATGTCGTAGTTTTAATTTaGGTATCATCCAATGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQHDAASPAMLGLSQNYVVVLI*VSSNAL Trigger: CAAAGCATTGGATGATACCCAAATTAAAACTACGAC...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTGATTTTCCTTCACGTAATTTTAGTATCCATGCACCTGGGTTTGCTTTTCAGGAACTTTGCCACTaGCCCATGAGAAGGACGATT | + |
|
Preference number: 4 (lower is better) Translates to: SSDFPSRNFSIHAPGFAFQELCH*PMRRTI Trigger: AATCGTCCTTCTCATGGGCCAGTGGCAAAGTTCCTG...AAAAGCAAACCCAGGTGCATGGATACTAAAATTACGTGAAGGAAAATCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
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| CDS-3UTR CCA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTAAACGCTCATATAAATaGCCAGAAGCAACTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKEGYWWCPHGHRDLSPIKRSYK*PEATEK Trigger: TTTTTCAGTTGCTTCTGGCCATTTATATGAGCGTTT...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATATCTGTTGGAACATCTaGATGGTTGGAGAGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNICWNI*MVGEYA Trigger: GGCATACTCTCCAACCATTCAGATGTTCCAACAGAT...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | CGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTAAAGAAGGTTATTGGTGGTGGGTTTGCTTTTAATTaGAAATATCCAAGATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: REMEPCKRSNPVKKVIGGGFAFN*KYPRLA Trigger: GGCCAATCTTGGATATTTTCAATTAAAAGCAAACCC...ACCACCAATAACCTTCTTTACTGGGTTTGATCTCTTACAAGGTTCCATCTCCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTTGTTGGGAAGATCCTaGTCAAGGTTTGAGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNLLGRS*SRFERL Trigger: CAGTCTCTCAAACCTTGATCAGGATCTTCCCAACAA...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTTTCTGTATCATATGTaGCCCATTCTGGGACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNFLYHM*PILGRS Trigger: GGATCGTCCCAGAATGGGTCACATATGATACAGAAA...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTGGGGCCACTTATACTaGACAAGCTCATACTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNWGHLY*TSSYWN Trigger: ATTCCAGTATGAGCTTGTGCAGTATAAGTGGCCCCA...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATATCCATCCATTTCAGTaGGGCTATCGCAAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNIHPFQ*GYRKME Trigger: CTCCATTTTGCGATAGCCGCACTGAAATGGATGGAT...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCCAGTGTTCATCTCTTTaGGGTCAAAGGGTTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSQCSSL*GQRVHR Trigger: ACGGTGAACCCTTTGACCTCAAAGAGATGAACACTG...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTTTTGTAACCCCAAATaGTTCGCTGCTTGTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNFCNPK*FAACQS Trigger: AGACTGACAAGCAGCGAATCATTTGGGGTTACAAAA...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGTCATGTCGAAGCAATGTCCTTCAAGTAGCAGATATTCTAGTTCATACTGTAATGCATGTGCTTTaGTATGACAGCACTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LWSCRSNVLQVADILVHTVMHVL*YDSTLI Trigger: GATAAGAGTGCTGTCATAGCAAAGCACATGCATTAC...AGTATGAACTAGAATATCTGCTACTTGAAGGACATTGCTTCGACATGACCACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR TCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCGCATGTGCTTTGCTATaGCAGCACTCTTATCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSACALL*QHSYLV Trigger: CACAAGATAAGAGTGCTGTCATAGCAAAGCACATGC...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCATCCTGATCAAGGTTTaGGAGACTGTTTGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSILIKV*ETVWIL Trigger: CAGGATCCAAACAGTCTCTCAAACCTTGATCAGGAT...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | TACAAAGTCAATCCACAGAAAGATGTGAAACGAACAGCCTCTCAGTCATCATCGTACTGTGGTTCAGTCTaGAAAATCAGAGAATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YKVNPQKDVKRTASQSSSYCGSV*KIREFN Trigger: GTTAAATTCTCTGATTTTGCAGACTGAACCACAGTA...CGATGATGACTGAGAGGCTGTTCGTTTCACATCTTTCTGTGGATTGACTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR CCA 90 bp | TGCCATCTTCTGAGCTTCTCTTGTCAAAGGATCAACAATAGCAAAGACATCAAAAATCCACAGAGTGACTaGAGATATTACAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLSFSCQRINNSKDIKNPQSD*RYYSIF Trigger: GAAGATGCTGTAATATCTCCAGTCACTCTGTGGATT...TTTGATGTCTTTGCTATTGTTGATCCTTTGACAAGAGAAGCTCAGAAGATGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATCAGACGAGCATCACCTaGCTTAATTTCAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KGVHNHHPASNLIFYVRNQTSIT*LNFKSI Trigger: GATAGATTTGAAATTAAGCCAGGTGATGCTCGTCTG...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCCAGCCAATGAAGACATaGGCCCATCTATTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSQPMKT*AHLFSS Trigger: TGATGAAAATAGATGGGCTCATGTCTTCATTGGCTG...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCAATGGTTGGAGAGTATaGCCTTATGGAGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSNGWRV*PYGEGK Trigger: TTTGCCTTCTCCATAAGGGCATACTCTCCAACCATT...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| 3UTR CAA 72 bp | ATCTTTATAACATCAGTACTGTTATCCCACTTGGGGTaGTACAAAGTCAATCCACAGAAAGATGTGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IFITSVLLSHLG*YKVNPQKDVKR Trigger: TCGTTTCACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGTGGGATAACAGTACTGATGTTATAAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| 3UTR CAA 72 bp | GGATTTATCTTTATAACATCAGTACTGTTATCCCACTaGGGGTTGTACAAAGTCAATCCACAGAAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFIFITSVLLSH*GLYKVNPQKDV Trigger: CACATCTTTCTGTGGATTGACTTTGTACAACCCCAAGTGGGATAACAGTACTGATGTTATAAAGATAAATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
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| CDS-3UTR CCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCGGTAAATCATGTTGTTaGGAAGATCCTGATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSGKSCC*EDPDQG Trigger: ACCTTGATCAGGATCTTCCCAACAACATGATTTACC...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR TCA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTCTTGAGCAGGATCAATaGACAGAACCAAATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: CAQPPPSFKSDILCQKLILEQDQ*TEPNYE Trigger: TTCATAATTTGGTTCTGTTCATTGATCCTGCTCAAG...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCTTCATTACTTTCTTCTaGCATAAATTCACTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSFITFF*HKFTGL Trigger: GAGGCCAGTGAATTTATGGCAGAAGAAAGTAATGAA...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR GCA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCGAGTCATTTCTTTGCTaGTCTCAATCAGGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSESFLC*SQSGTF Trigger: AAAAGTACCTGATTGAGAGCAGCAAAGAAATGACTC...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CCA 90 bp | GCGGGGTCTCGGGCCACTTCGCAGTCAAGTGGGCGGTCACCGCCTTaGACGCAGTCGCCGTGCTGGCGCCGAGCAGGGCGAGCCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSRATSQSSGRSPP*TQSPCWRRAGRATA Trigger: CGCTGTGGCTCGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCGAGACCCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CCA 90 bp | CTGGCCTCCAGCAGCAGCGGGGTCTCGGGCCACTTCGCAGTCAAGTaGGCGGTCACCGCCTTGGACGCAGTCGCCGTGCTGGCGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LASSSSGVSGHFAVK*AVTALDAVAVLAPS Trigger: GCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCGAGACCCCGCTGCTGCTGGAGGCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS GCA 90 bp | ACTTCGCAGTCAAGTGGGCGGTCACCGCCTTGGACGCAGTCGCCGTaGTGGCGCCGAGCAGGGCGAGCCACAGCGCGACGGAGCGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSQSSGRSPPWTQSP*WRRAGRATARRSAG Trigger: TCCTGCGCTCCGTCGCGCTGTGGCTCGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CAA 90 bp | CATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATCCCTGGGATATCCTGGCTGAGAGCTaGGTACTGGCCCCGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HDAASPAMLGLSQNYPWDILAES*VLAPEP Trigger: AGGCTCCGGGGCCAGTACCAAGCTCTCAGCCAGGAT...ATCCCAGGGATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 90 bp | TGGGAAGATCCTGATCAAGGTTTGAGAGACTGTTTGGATCCTGGCTaGGAGCTTGGTACTGGCCCCGGAGCCTGTCACCTGCTGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: WEDPDQGLRDCLDPG*ELGTGPGACHLLRF Trigger: GAATCTCAGCAGGTGACAGGCTCCGGGGCCAGTACCAAGCTCTCAGCCAGGATCCAAACAGTCTCTCAAACCTTGATCAGGATCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 90 bp | ATCCTGGCTGAGAGCTTGGTACTGGCCCCGGAGCCTGTCACCTGCTaGGATTCTCCTGAACTTCTTAAGATCCACCACATACAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILAESLVLAPEPVTC*DSPELLKIHHIQGT Trigger: AGTGCCTTGTATGTGGTGGATCTTAAGAAGTTCAGGAGAATCTCAGCAGGTGACAGGCTCCGGGGCCAGTACCAAGCTCTCAGCCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCAGGGGCTTCTGAGAGTTaGCCCCTGCAGTTCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPPTVKREMEPCKRSNPGASES*PLQFMN Trigger: GTTCATGAACTGCAGGGGCAAACTCTCAGAAGCCCC...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCAGGATGTCCAGGAACTTaGCCACTGGCCCATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPPTVKREMEPCKRSNPGCPGT*PLAHEK Trigger: CTTCTCATGGGCCAGTGGCAAAGTTCCTGGACATCC...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS TCA 90 bp | CATCCCTCTGGGGGCGGCTCATCAGCAGCCATCTGTTGGAACATCTaGATGGTTGGAGAGTATGCCCTTATGGAGAAGGCAAACTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPSGGGSSAAICWNI*MVGEYALMEKANFR Trigger: CCTAAAGTTTGCCTTCTCCATAAGGGCATACTCTCCAACCATTCAGATGTTCCAACAGATGGCTGCTGATGAGCCGCCCCCAGAGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 90 bp | TCAAGGTTTGAGAGACTGTTTGGATCCTGGCTGAGAGCTTGGTACTaGCCCCGGAGCCTGTCACCTGCTGAGATTCTCCTGAACTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRFERLFGSWLRAWY*PRSLSPAEILLNFL Trigger: TAAGAAGTTCAGGAGAATCTCAGCAGGTGACAGGCTCCGGGGCCAGTACCAAGCTCTCAGCCAGGATCCAAACAGTCTCTCAAACCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCATGACATTGCCTACGTaGGTCTCGGGTTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIMTLPT*VSGSAP Trigger: AGGAGCAGAACCCGAGACCAACGTAGGCAATGTCAT...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 90 bp | CCTCTGGGGGCGGCTCATCAGCAGCCATCTGTTGGAACATCTGAATaGTTGGAGAGTATGCCCTTATGGAGAAGGCAAACTTTAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLGAAHQQPSVGTSE*LESMPLWRRQTLGD Trigger: ATCTCCTAAAGTTTGCCTTCTCCATAAGGGCATACTCTCCAACCATTCAGATGTTCCAACAGATGGCTGCTGATGAGCCGCCCCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 90 bp | ACAGGTGCACTTCGTGTGTATAACCACAAATGCAGTACATCCCTCTaGGGGCGGCTCATCAGCAGCCATCTGTTGGAACATCTGAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGALRVYNHKCSTSL*GRLISSHLLEHLNG Trigger: ACCATTCAGATGTTCCAACAGATGGCTGCTGATGAGCCGCCCCCAGAGGGATGTACTGCATTTGTGGTTATACACACGAAGTGCACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGATCAGCAGCCATCTGTaGGAACATCTGAATGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLVVAVPQVSSRWRIFITISSHL*EHLNGW Trigger: CCAACCATTCAGATGTTCCAACAGATGGCTGCTGAT...CGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTACACCACAGCCAGTCTaGAGGAAGAGACTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKEGYWWCPHGHRDLSPITPQPV*RKRLDG Trigger: GCCATCAAGTCTCTTCCTCAAGACTGGCTGTGGTGT...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGCAGCAGCTTCTAGTTaGGGTTCTTTTGTTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTSRGSSTGLQQVADFYHAAASS*GSFVLG Trigger: TCCCAAAACAAAAGAACCCAAACTAGAAGCTGCTGC...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGGGGTGATCATGTTGAGAGTCAGAAGGTGGGACTCTGGGATGTCCAGGGGTCACTCATGTGTTTaGAGTTCATGTCCATACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSGVIMLRVRRWDSGMSRGHSCV*SSCPYF Trigger: AAAGTATGGACATGAACTCAAAACACATGAGTGACC...CCTGGACATCCCAGAGTCCCACCTTCTGACTCTCAACATGATCACCCCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGAAGGTTATTGGTGGTGCCCTCATGGGCACAGAGACCTTAGTCCCATTTCAACTACAACAGGATaGCTTCTTGTGCCCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKEGYWWCPHGHRDLSPISTTTG*LLVPSV Trigger: CACGCTGGGCACAAGAAGCAATCCTGTTGTAGTTGA...AATGGGACTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACTTGGGTTCTTTTGTTTaGGGATTATTGCACAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTSRGSSTGLQQVADFYHLGSFV*GLLHRS Trigger: CGACCTGTGCAATAATCCCAAAACAAAAGAACCCAA...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS GCA 90 bp | AATCTCATTAACTTTACAGGTGCACTTCGTGTGTATAACCACAAATaGAGTACATCCCTCTGGGGGCGGCTCATCAGCAGCCATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLINFTGALRVYNHK*STSLWGRLISSHLL Trigger: CAACAGATGGCTGCTGATGAGCCGCCCCCAGAGGGATGTACTGCATTTGTGGTTATACACACGAAGTGCACCTGTAAAGTTAATGAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCAGTCCAAGGTATATTCTaGAGCAGGATCAATGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPPTVKREMEPCKRSNPVQGIF*SRINEQ Trigger: CTGTTCATTGATCCTGCTCAAGAATATACCTTGGAC...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGGTCACTCATGTGTTTaGAGTTCATGTCCATACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PTSRGSSTGLQQVADFYHGHSCV*SSCPYF Trigger: AAAGTATGGACATGAACTCAAAACACATGAGTGACC...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CCTACTAGTCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACAGATTAATGTGTATGTaGTCTAAGAACTGTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTSRGSSTGLQQVADFYHRLMCM*SKNCPA Trigger: AGCCGGACAGTTCTTAGACAACATACACATTAATCT...GTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGACTAGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGGCCACCTACTGTGAAGCGGGAGATGGAACCTTGTAAGAGATCAAACCCAAAAGGAGTCATTTCTTaGCTGCTCTCAATCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPPTVKREMEPCKRSNPKGVIS*LLSIRY Trigger: GTACCTGATTGAGAGCAGCAAAGAAATGACTCCTTT...TGGGTTTGATCTCTTACAAGGTTCCATCTCCCGCTTCACAGTAGGTGGCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTCAGTCTGGGGCTTCTGAGAGTTaGCCCCTGCAGTTCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQVADILVHTLLSHFSQSGASES*PLQFMN Trigger: GTTCATGAACTGCAGGGGCAAACTCTCAGAAGCCCC...AGACTGAGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGGCAGTTCCACAGGTCTCCAGCAGGTGGCGGATTTTTATCACGTTTCATCGAAATTCCCAACAACTaGAAGGCCAATCAATATACA | + |
|
Preference number: 5 (lower is better) Translates to: SWQFHRSPAGGGFLSRFIEIPNN*KANQYT Trigger: TGTATATTGATTGGCCTTCAAGTTGTTGGGAATTTC...GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATGATTGGCCATCACTATaGTGTCAACTACAACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQHDAASPAMLGLSQNYDWPSL*CQLQQD Trigger: ATCCTGTTGTAGTTGACACAATAGTGATGGCCAATC...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGATTTTCCTTCACGTAATTTTAGTATCCATGCACCTGGGTTTGCTTTTGGATGTCCAGGAACTTaGCCACTGGCCCATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSDFPSRNFSIHAPGFAFGCPGT*PLAHEK Trigger: CTTCTCATGGGCCAGTGGCAAAGTTCCTGGACATCC...AAAAGCAAACCCAGGTGCATGGATACTAAAATTACGTGAAGGAAAATCAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS CCA 90 bp | CAATCTCTGCATAGAGAACAATCACTGGTAAGTTGTCACTGCTTGTaGGAAACTTATGATCTCTTTCAAATAGGTAAGGCCTGGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSLHREQSLVSCHCL*ETYDLFQIGKAWAL Trigger: CAAGGCCCAGGCCTTACCTATTTGAAAGAGATCATAAGTTTCCCACAAGCAGTGACAACTTACCAGTGATTGTTCTCTATGCAGAGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGCAACATGATGCTGCATCTCCTGCCATGCTGGGCCTTAGTCAGAATTATTTCAGAATCTTGCTTTaGAAAGTGTTTAACACGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLQHDAASPAMLGLSQNYFRILL*KVFNTT Trigger: CGTCGTGTTAAACACTTTCAAAAGCAAGATTCTGAA...ATAATTCTGACTAAGGCCCAGCATGGCAGGAGATGCAGCATCATGTTGCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCCTGCTTGTCAGTCTGTaGATGAAGCCAGTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSLLVSL*MKPVGP Trigger: TGGCCCCACTGGCTTCATCAACAGACTGACAAGCAG...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS GCA 90 bp | TCCACCACATACAAGGCACTGATATGGTATTTCCTTTTAACAAGGTaGGATGCCCAGTATCCTGTTTTCCAGAAACGATATCCATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: STTYKALIWYFLLTR*DAQYPVFQKRYPSI Trigger: AATGGATGGATATCGTTTCTGGAAAACAGGATACTGGGCATCGCACCTTGTTAAAAGGAAATACCATATCAGTGCCTTGTATGTGGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 90 bp | TCTCCCAGACGGCACATCAAAATCAGCAATAATCCACAGAGTGACTaGAGATATTACAGCATCTTCTTGAGTTACGTAATGCATGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPRRHIKISNNPQSD*RYYSIFLSYVMHVL Trigger: AAGCACATGCATTACGTAACTCAAGAAGATGCTGTAATATCTCCAGTCACTCTGTGGATTATTGCTGATTTTGATGTGCCGTCTGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS TCA 90 bp | TATTTTCAAGATGATCTAATAGTGTCCGGATTTCTGTATCATATGTaGCCCATTCTGGGACGATCCTTGCAGCAGCTTCTAGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YFQDDLIVSGFLYHM*PILGRSLQQLLVWV Trigger: AACCCAAACTAGAAGCTGCTGCAAGGATCGTCCCAGAATGGGTCACATATGATACAGAAATCCGGACACTATTAGATCATCTTGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS GCA 90 bp | GTGGTTCAGTCTGCAAAATCAGAGAATTTAACCGGGATACGACATTaGTCTTATCCATCAGGAAATCAATTGCACTGGTTTCATCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VVQSAKSENLTGIRH*SYPSGNQLHWFHPL Trigger: TAAGGGATGAAACCAGTGCAATTGATTTCCTGATGGATAAGAGCAATGTCGTATCCCGGTTAAATTCTCTGATTTTGCAGACTGAACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
||
| CDS GCA 90 bp | TCAGCAGTTTCTTCTTCTGCCAGTCTCCTGAGAAAGCTTCTCAAGTaGTTGTTTTTATGTGTAAGGAAAGCTGCCAAAATTCCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAVSSSASLLRKLLK*LFLCVRKAAKIPLE Trigger: TTCTAGAGGAATTTTGGCAGCTTTCCTTACACATAAAAACAAGCACTTGAGAAGCTTTCTCAGGAGACTGGCAGAAGAAGAAACTGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 90 bp | TTGTACCAATCTCTGCATAGAGAACAATCACTGGTAAGTTGTCACTaGTTGTGGGAAACTTATGATCTCTTTCAAATAGGTAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LYQSLHREQSLVSCH*LWETYDLFQIGKAW Trigger: CCAGGCCTTACCTATTTGAAAGAGATCATAAGTTTCCCACAAGCAGTGACAACTTACCAGTGATTGTTCTCTATGCAGAGATTGGTACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AATATTATCAAGGTCACAGTTGCTATGTACTGTTTCAACCAGCCATCCTTCTGGGTCCAAGGTATATTCTaGAGCAGGATCAATGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: NIIKVTVAMYCFNQPSFWVQGIF*SRINEQ Trigger: CTGTTCATTGATCCTGCTCAAGAATATACCTTGGAC...CCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGTGACCTTGATAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCAAGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTCAGTCTTATCAAGGTCACAGTaGCTATGTACTGTTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PSSSRYSSSYSAVTLLSVLSRSQ*LCTVST Trigger: GGTTGAAACAGTACATAGCAACTGTGACCTTGATAA...GACTGAGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACTTGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153693.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATGATCCTGATCAAGGTTaGAGAGACTGTTTGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGVHNHHPASNLIFYVRNDPDQG*RDCLDP Trigger: AGGATCCAAACAGTCTCTCAAACCTTGATCAGGATC...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS TCA 90 bp | TGTCCATACTTTCAACAATGCCCGCGATGTTCTGTAGTGAATTACTaGACGTTATCTTTTCCAGCAAGTGAAAATCTTCTTGGTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPYFQQCPRCSVVNY*TLSFPASENLLGRA Trigger: AGCTCTACCAAGAAGATTTTCACTTGCTGGAAAAGATAACGTTCAGTAATTCACTACAGAACATCGCGGGCATTGTTGAAAGTATGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGTGGTCATGTCGAAGCAATGTCCTTCAAGTAGCAGATATTCTAGTTCACTTCTTCCATCATACTaGGAATGGATTCCCAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSVVMSKQCPSSSRYSSSLLPSY*EWIPKI Trigger: TATCTTGGGAATCCATTCCAAGTATGATGGAAGAAG...TGAACTAGAATATCTGCTACTTGAAGGACATTGCTTCGACATGACCACAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATAGGAGTGGAAACTATTaGAGTGGCTGCTTGAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KGVHNHHPASNLIFYVRNRSGNY*SGCLKT Trigger: AGTTTTCAAGCAGCCACTCAAATAGTTTCCACTCCT...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTCACAGGTCGATCGTCTaGGCTCTTTGTTTAGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: CAQPPPSFKSDILCQKLIHRSIV*ALCLDS Trigger: CGAATCTAAACAAAGAGCCAAGACGATCGACCTGTG...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCCTTCAAGTAGCAGATATTCTAGTTCATACTCTGCTGTCACACTTCTCTATCGACTATGAAAACTaGTTTCCATGTGCTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: NVLQVADILVHTLLSHFSIDYEN*FPCASM Trigger: CATTGAAGCACATGGAAACAAGTTTTCATAGTCGAT...AGAGAAGTGTGACAGCAGAGTATGAACTAGAATATCTGCTACTTGAAGGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127153.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATACATTTTTCTTGAGCTaGGTTTCTGAATATAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGVHNHHPASNLIFYVRNTFFLS*VSEYSG Trigger: GCCACTATATTCAGAAACCAAGCTCAAGAAAAATGT...ATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACACCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCGATCGTCTTGGCTCTTaGTTTAGATTCGTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSDRLGS*FRFVIT Trigger: TGTGATGACGAATCTAAACAAAGAGCCAAGACGATC...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTTTTGTTTTGGGATTATaGCACAGGTCGATCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAQPPPSFKSDILCQKLIFVLGL*HRSIVL Trigger: CAAGACGATCGACCTGTGCAATAATCCCAAAACAAA...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | AAACATACAGTATGGCTTATGCCTACCAAACATCCAGAAGAACATAAATATAGCCTTCTTCCATCATACTaGGAATGGATTCCCAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: KHTVWLMPTKHPEEHKYSLLPSY*EWIPKI Trigger: TATCTTGGGAATCCATTCCAAGTATGATGGAAGAAG...GCTATATTTATGTTCTTCTGGATGTTTGGTAGGCATAAGCCATACTGTATGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTTTATCAAGGTCACAGTaGCTATGTACTGTTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: CAQPPPSFKSDILCQKLILSRSQ*LCTVST Trigger: GGTTGAAACAGTACATAGCAACTGTGACCTTGATAA...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCACAACCACCACCCAGCTTCAAATCTGATATTTTATGTCAGAAATTAATTCTAGTTTGGGTTCTTTaGTTTTGGGATTATTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CAQPPPSFKSDILCQKLILVWVL*FWDYCT Trigger: TGTGCAATAATCCCAAAACAAAAGAACCCAAACTAG...AATTAATTTCTGACATAAAATATCAGATTTGAAGCTGGGTGGTGGTTGTGCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS GCA 72 bp | TCAAGTGGGCGGTCACCGCCTTGGACGCAGTCGCCGTaGTGGCGCCGAGCAGGGCGAGCCACAGCGCGACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGRSPPWTQSP*WRRAGRATARR Trigger: CCGTCGCGCTGTGGCTCGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CAA 90 bp | AGCGGGGTCTCGGGCCACTTCGCAGTCAAGTGGGCGGTCACCGCCTaGGACGCAGTCGCCGTGCTGGCGCCGAGCAGGGCGAGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVSGHFAVKWAVTA*DAVAVLAPSRASHS Trigger: GCTGTGGCTCGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCGAGACCCCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 72 bp | CGGGCCACTTCGCAGTCAAGTGGGCGGTCACCGCCTTaGACGCAGTCGCCGTGCTGGCGCCGAGCAGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RATSQSSGRSPP*TQSPCWRRAGR Trigger: TCGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CAA 72 bp | TCGGGCCACTTCGCAGTCAAGTGGGCGGTCACCGCCTaGGACGCAGTCGCCGTGCTGGCGCCGAGCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGHFAVKWAVTA*DAVAVLAPSRA Trigger: CGCCCTGCTCGGCGCCAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
||
| CDS CCA 72 bp | AGCAGCAGCGGGGTCTCGGGCCACTTCGCAGTCAAGTaGGCGGTCACCGCCTTGGACGCAGTCGCCGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSGVSGHFAVK*AVTALDAVAVL Trigger: CAGCACGGCGACTGCGTCCAAGGCGGTGACCGCCCACTTGACTGCGAAGTGGCCCGAGACCCCGCTGCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CCA 72 bp | AGGTTTGAGAGACTGTTTGGATCCTGGCTGAGAGCTTaGTACTGGCCCCGGAGCCTGTCACCTGCTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: RFERLFGSWLRA*YWPRSLSPAEI Trigger: AATCTCAGCAGGTGACAGGCTCCGGGGCCAGTACCAAGCTCTCAGCCAGGATCCAAACAGTCTCTCAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS GCA 72 bp | AACTTTACAGGTGCACTTCGTGTGTATAACCACAAATaGAGTACATCCCTCTGGGGGCGGCTCATCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NFTGALRVYNHK*STSLWGRLISS Trigger: GCTGCTGATGAGCCGCCCCCAGAGGGATGTACTGCATTTGTGGTTATACACACGAAGTGCACCTGTAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CCA 72 bp | CTTCGTGTGTATAACCACAAATGCAGTACATCCCTCTaGGGGCGGCTCATCAGCAGCCATCTGTTGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: LRVYNHKCSTSL*GRLISSHLLEH Trigger: ATGTTCCAACAGATGGCTGCTGATGAGCCGCCCCCAGAGGGATGTACTGCATTTGTGGTTATACACACGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 72 bp | CATCATAGCGAGAGGCACGCACAGCCAATGAAGACATaGGCCCATCTATTTTCATCACCAGGTCACTCATGT | + |
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Preference number: 6 (lower is better) Translates to: HHSERHAQPMKT*AHLFSSPGHSC Trigger: ACATGAGTGACCTGGTGATGAAAATAGATGGGCTCATGTCTTCATTGGCTGTGCGTGCCTCTCGCTATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | CCCATTCTGGGACGATCCTTGCAGCAGCTTCTAGTTTGGGTTCTTTaGTTTTGGGATTATTGCACAGGTCGATCGTCTTGGCTCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PILGRSLQQLLVWVL*FWDYCTGRSSWLFV Trigger: AACAAAGAGCCAAGACGATCGACCTGTGCAATAATCCCAAAACAAAAGAACCCAAACTAGAAGCTGCTGCAAGGATCGTCCCAGAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 90 bp | TCATATGTGACCCATTCTGGGACGATCCTTGCAGCAGCTTCTAGTTaGGGTTCTTTTGTTTTGGGATTATTGCACAGGTCGATCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SYVTHSGTILAAASS*GSFVLGLLHRSIVL Trigger: CAAGACGATCGACCTGTGCAATAATCCCAAAACAAAAGAACCCAAACTAGAAGCTGCTGCAAGGATCGTCCCAGAATGGGTCACATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 72 bp | CCACAGCCAGTCTTGAGGAAGAGACTTGATGGCAACTaGGTAAATCATGTTGTTGGGAAGATCCTGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: PQPVLRKRLDGN*VNHVVGKILIK Trigger: CTTGATCAGGATCTTCCCAACAACATGATTTACCAAGTTGCCATCAAGTCTCTTCCTCAAGACTGGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 90 bp | TCTGGGACGATCCTTGCAGCAGCTTCTAGTTTGGGTTCTTTTGTTTaGGGATTATTGCACAGGTCGATCGTCTTGGCTCTTTGTTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: SGTILAAASSLGSFV*GLLHRSIVLALCLD Trigger: ATCTAAACAAAGAGCCAAGACGATCGACCTGTGCAATAATCCCAAAACAAAAGAACCCAAACTAGAAGCTGCTGCAAGGATCGTCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 72 bp | GATGATCTAATAGTGTCCGGATTTCTGTATCATATGTaGCCCATTCTGGGACGATCCTTGCAGCAGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DDLIVSGFLYHM*PILGRSLQQLL Trigger: TAGAAGCTGCTGCAAGGATCGTCCCAGAATGGGTCACATATGATACAGAAATCCGGACACTATTAGATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 72 bp | GCCCATCTATTTTCATCACCAGGTCACTCATGTGTTTaGAGTTCATGTCCATACTTTCAACAATGCCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: AHLFSSPGHSCV*SSCPYFQQCPR Trigger: TCGCGGGCATTGTTGAAAGTATGGACATGAACTCAAAACACATGAGTGACCTGGTGATGAAAATAGATGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | AAAGAGCTTGAGGCAAAGGACCTAGGCCAGTCATCTTATAAAAGGTaGCTCCTTCCATTCTTCTTCCATCATACTTGGAATGGATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: KELEAKDLGQSSYKR*LLPFFFHHTWNGFP Trigger: TGGGAATCCATTCCAAGTATGATGGAAGAAGAATGGAAGGAGCAACCTTTTATAAGATGACTGGCCTAGGTCCTTTGCCTCAAGCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | TACCAATCTCTGCATAGAGAACAATCACTGGTAAGTTGTCACTGCTaGTGGGAAACTTATGATCTCTTTCAAATAGGTAAGGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: YQSLHREQSLVSCHC*WETYDLFQIGKAWA Trigger: GGCCCAGGCCTTACCTATTTGAAAGAGATCATAAGTTTCCCACAAGCAGTGACAACTTACCAGTGATTGTTCTCTATGCAGAGATTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 72 bp | CCCATCTATTTTCATCACCAGGTCACTCATGTGTTTTaGGTTCATGTCCATACTTTCAACAATGCCCGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PIYFHHQVTHVF*VHVHTFNNARD Trigger: ATCGCGGGCATTGTTGAAAGTATGGACATGAACTCAAAACACATGAGTGACCTGGTGATGAAAATAGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 72 bp | GGCACTGATATGGTATTTCCTTTTAACAAGGTGCGATaGCCAGTATCCTGTTTTCCAGAAACGATATCCATC | + |
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Preference number: 6 (lower is better) Translates to: GTDMVFPFNKVR*PVSCFPETISI Trigger: GATGGATATCGTTTCTGGAAAACAGGATACTGGGCATCGCACCTTGTTAAAAGGAAATACCATATCAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 90 bp | ATTTTCAGAATCTTGCTTTTGAAAGTGTTTAACACGACGATGACATaGCCTACGTTGGTCTCGGGTTCTGCTCCTTCATGCCCAGTTATT | + |
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Preference number: 6 (lower is better) Translates to: IFRILLLKVFNTTMT*PTLVSGSAPSCPVI Trigger: AATAACTGGGCATGAAGGAGCAGAACCCGAGACCAACGTAGGCAATGTCATCGTCGTGTTAAACACTTTCAAAAGCAAGATTCTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156203.8 ENSMUST00000173391.2 |
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| CDS TCA 72 bp | TTTCTTTTCTCATTAGCTCATTCACAGCAATCCTGGTaGGAGTCCTGGCTTTTACAGGAAAGTTCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: FLFSLAHSQQSW*ESWLLQESSVR Trigger: TCTCACAGAACTTTCCTGTAAAAGCCAGGACTCTCACCAGGATTGCTGTGAATGAGCTAATGAGAAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 72 bp | TCTTTTGTTTTGGGATTATTGCACAGGTCGATCGTCTaGGCTCTTTGTTTAGATTCGTCATCACACCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SFVLGLLHRSIV*ALCLDSSSHQV Trigger: AACCTGGTGTGATGACGAATCTAAACAAAGAGCCAAGACGATCGACCTGTGCAATAATCCCAAAACAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 90 bp | TGTGGTTCAGTCTGCAAAATCAGAGAATTTAACCGGGATACGACATaGCTCTTATCCATCAGGAAATCAATTGCACTGGTTTCATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CGSVCKIREFNRDTT*LLSIRKSIALVSSL Trigger: AAGGGATGAAACCAGTGCAATTGATTTCCTGATGGATAAGAGCAATGTCGTATCCCGGTTAAATTCTCTGATTTTGCAGACTGAACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | GCAGTTTCTTCTTCTGCCAGTCTCCTGAGAAAGCTTCTCAAGTGCTaGTTTTTATGTGTAAGGAAAGCTGCCAAAATTCCTCTAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: AVSSSASLLRKLLKC*FLCVRKAAKIPLEM Trigger: CATTTCTAGAGGAATTTTGGCAGCTTTCCTTACACATAAAAACAAGCACTTGAGAAGCTTTCTCAGGAGACTGGCAGAAGAAGAAACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 72 bp | TACAAGGCACTGATATGGTATTTCCTTTTAACAAGGTaGGATGCCCAGTATCCTGTTTTCCAGAAACGATAT | + |
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Preference number: 6 (lower is better) Translates to: YKALIWYFLLTR*DAQYPVFQKRY Trigger: ATATCGTTTCTGGAAAACAGGATACTGGGCATCGCACCTTGTTAAAAGGAAATACCATATCAGTGCCTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CCA 72 bp | AAAAGGTTGCTCCTTCCATTCTTCTTCCATCATACTTaGAATGGATTCCCAAGATATCCAAAATGTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KRLLLPFFFHHT*NGFPRYPKCRH Trigger: ATGCCGACATTTTGGATATCTTGGGAATCCATTCCAAGTATGATGGAAGAAGAATGGAAGGAGCAACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CCA 72 bp | AACTTCTTAAGATCCACCACATACAAGGCACTGATATaGTATTTCCTTTTAACAAGGTGCGATGCCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: NFLRSTTYKALI*YFLLTRCDAQY Trigger: ATACTGGGCATCGCACCTTGTTAAAAGGAAATACCATATCAGTGCCTTGTATGTGGTGGATCTTAAGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 72 bp | GTCTGCAAAATCAGAGAATTTAACCGGGATACGACATaGCTCTTATCCATCAGGAAATCAATTGCACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VCKIREFNRDTT*LLSIRKSIALV Trigger: AACCAGTGCAATTGATTTCCTGATGGATAAGAGCAATGTCGTATCCCGGTTAAATTCTCTGATTTTGCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | ATGGATTCCCAAGATATCCAAAATGTCGGCATGAGGACATTTATTTaGAAGAATACTCTTGACTTCATCCACAGTGAGTATACGATGACC | + |
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Preference number: 6 (lower is better) Translates to: MDSQDIQNVGMRTFI*KNTLDFIHSEYTMT Trigger: GGTCATCGTATACTCACTGTGGATGAAGTCAAGAGTATTCTTCAAAATAAATGTCCTCATGCCGACATTTTGGATATCTTGGGAATCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS CAA 90 bp | ACACTTCTCTCAGTATCTTTTAAGTTAATATTATCAAGGTCACAGTaGCTATGTACTGTTTCAACCAGCCATCCTTCTGGGGTGATCATG | + |
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Preference number: 6 (lower is better) Translates to: TLLSVSFKLILSRSQ*LCTVSTSHPSGVIM Trigger: CATGATCACCCCAGAAGGATGGCTGGTTGAAACAGTACATAGCAACTGTGACCTTGATAATATTAACTTAAAAGATACTGAGAGAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 72 bp | CATCTTCTTGAGTTACGTAATGCATGTGCTTTGCTATaGCAGCACTCTTATCTTGTGAATCCAAGAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HLLELRNACALL*QHSYLVNPRKR Trigger: TCTCTTTCTTGGATTCACAAGATAAGAGTGCTGTCATAGCAAAGCACATGCATTACGTAACTCAAGAAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 72 bp | TCTGCAAAATCAGAGAATTTAACCGGGATACGACATTaGTCTTATCCATCAGGAAATCAATTGCACTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SAKSENLTGIRH*SYPSGNQLHWF Trigger: AAACCAGTGCAATTGATTTCCTGATGGATAAGAGCAATGTCGTATCCCGGTTAAATTCTCTGATTTTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 72 bp | TCTCTGCATAGAGAACAATCACTGGTAAGTTGTCACTaGTTGTGGGAAACTTATGATCTCTTTCAAATAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLHREQSLVSCH*LWETYDLFQIG Trigger: ACCTATTTGAAAGAGATCATAAGTTTCCCACAAGCAGTGACAACTTACCAGTGATTGTTCTCTATGCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS GCA 72 bp | GTAATTCCCAGACCTTCAAAGGAGTCATTTCTTTGCTaGTCTCAATCAGGTACTTTTGGAATATTGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VIPRPSKESFLC*SQSGTFGILSD Trigger: ATCTGACAATATTCCAAAAGTACCTGATTGAGAGCAGCAAAGAAATGACTCCTTTGAAGGTCTGGGAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS CAA 72 bp | CTGCATAGAGAACAATCACTGGTAAGTTGTCACTGCTaGTGGGAAACTTATGATCTCTTTCAAATAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LHREQSLVSCHC*WETYDLFQIGK Trigger: CTTACCTATTTGAAAGAGATCATAAGTTTCCCACAAGCAGTGACAACTTACCAGTGATTGTTCTCTATGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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| CDS TCA 72 bp | TTTCAACAATGCCCGCGATGTTCTGTAGTGAATTACTaGACGTTATCTTTTCCAGCAAGTGAAAATCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FQQCPRCSVVNY*TLSFPASENLL Trigger: AAGAAGATTTTCACTTGCTGGAAAAGATAACGTTCAGTAATTCACTACAGAACATCGCGGGCATTGTTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127153.2 ENSMUST00000156203.8 |
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| CDS GCA 72 bp | TCATTTTCTAAGTCATTAATCCACACTATTGAAGAATaGCGGATGTCTAAAACAAAGTCATGGTCCCACACA | + |
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Preference number: 6 (lower is better) Translates to: SFSKSLIHTIEE*RMSKTKSWSHT Trigger: TGTGTGGGACCATGACTTTGTTTTAGACATCCGGCATTCTTCAATAGTGTGGATTAATGACTTAGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156203.8 |
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