Pregenerated sensors for UGDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029201Ensembl transcript IDs: ENSMUST00000031103.14, ENSMUST00000131263.3
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ATTTACCATTTAGTATCAGACAGACACTGGCTACCCTaGAGTACCACGTTATCCCAGGTAAGAGGGCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: IYHLVSDRHWLP*STTLSQVRGQC Trigger: ACATTGCCCTCTTACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCATTGGCTGCCAGCTTaGAAAGCTCCGAGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGHWLPA*KAPRTR Trigger: CCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCAAATATGCGGCGGATaGTTTCTGCTGCCCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGQICGG*FLLPAQ Trigger: CTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGGSLGP*WLFPLP Trigger: TGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGGCTTTCTGGCCCTCTaGAGTTTCATCCCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGGFLAL*SFIPSN Trigger: ATTGGAGGGGATGAAACTCCAGAGGGCCAGAAAGCC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTATTTCAGGGCACATGTaGGCAATGACACTGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGISGHM*AMTLHV Trigger: CACGTGCAGTGTCATTGCTCACATGTGCCCTGAAAT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGATATACTTCAGGTCTaGTGCCCGGCCTTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGDILQV*CPAFSH Trigger: ATGGGAAAAGGCCGGGCAGCAGACCTGAAGTATATC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTTGAGTTCTGCACAATaGGGCGAGCACAAGCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGLSSAQ*GEHKLR Trigger: TCGAAGCTTGTGCTCGCCGCATTGTGCAGAACTCAA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGCGCAAGAAATGCATTaGCTGCCAGCTTGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGAQEMH*LPAWKA Trigger: AGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTGTTGGCATCAAATATaGGGCGGATGCTTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGCWHQI*GGCFLL Trigger: CAGCAGAAAGCATCCGCCGCATATTTGATGCCAACA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTCCTTAGGAACCCAGTaGTCATACACAGCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGSLGTQ*SYTAHR Trigger: TCTGTGTGCTGTGTATGAGCACTGGGTTCCTAAGGA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTAGTTGGGCTTTGTGTTaGCATCAAATATGCGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGSWALC*HQICGG Trigger: TCCGCCGCATATTTGATGCCAACACAAAGCCCAACT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTTTGGATCATATATGTaGAGGTGTGCACCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGFGSYM*RCAPSS Trigger: GGACGAGGGTGCACACCTCCACATATATGATCCAAA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTATGGGTCCTTGGAAATaGTCACCAGTCTGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGMGPWK*SPVWTL Trigger: AAGTGTCCAGACTGGTGACCATTTCCAAGGACCCAT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTATCACACGCTTCGTATaGGTCCTTGGAAATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGITRFV*VLGNGH Trigger: GTGACCATTTCCAAGGACCCATACGAAGCGTGTGAT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCTAGATCGGCTTCTCTaGTGGCATCATCAATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGLDRLL*WHHQYW Trigger: CCAATATTGATGATGCCATCAGAGAAGCCGATCTAG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTAATTTTGTACCCATTTaGGTTCTGCACAATGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGNFVPI*VLHNAA Trigger: CGCCGCATTGTGCAGAACTCAAATGGGTACAAAATT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGCCCGAACGGCTTTCTaGCCCTCTGGAGTTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIARTAF*PSGVSS Trigger: GGATGAAACTCCAGAGGGCCAGAAAGCCGTTCGGGC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCACCAAAACCAACGCTaGCCTTTAGAAACTTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGHQNQR*PLETYS Trigger: GGAATAAGTTTCTAAAGGCCAGCGTTGGTTTTGGTG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGTCTGTAGCTCACTGTaGAGCCCATCCAGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIVCSSL*SPSRTR Trigger: GCGTGTCCTGGATGGGCTCCACAGTGAGCTACAGAC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCCAATTGTTTCAATCTaGAAGCCAATGGTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGPIVSI*KPMVCS Trigger: GCTACAGACCATTGGCTTCCAGATTGAAACAATTGG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGGGTTTCTTGTTAGGTaGGTCCTGAAGACTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGGFLVR*VLKTKL Trigger: AAGTTTAGTCTTCAGGACCCACCTAACAAGAAACCC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTCACTTGGTCATCCGCTaGGACACCCGGATGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIHLVIR*DTRMRK Trigger: CTTTCTCATCCGGGTGTCTCAGCGGATGACCAAGTG...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCCTGTAAATTCAAGTTaGGCTTTGTGTTGGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGPVNSS*ALCWHQ Trigger: TTGATGCCAACACAAAGCCCAACTTGAATTTACAGG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTACTGGAGGATTCTCTaGTATCACCAGTATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGYWRIL*YHQYPF Trigger: AAAAGGATACTGGTGATACCAGAGAATCCTCCAGTA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGCTATCTATGATCCGTaGTGCAAACCTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIAIYDP*CKPPPL Trigger: CAGAGGAGGAGGTTTGCATCACGGATCATAGATAGC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTATAAATAGGAAGGGTTaGAGAATTCCATGCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSIRQTLATLKYHVIPGINRKG*RIPCID Trigger: ATCAATGCATGGAATTCTCCAACCCTTCCTATTTAT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTCTTCGTATGGGTCCTTaGAAATGGTCACCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIILRMGP*KWSPVW Trigger: CCAGACTGGTGACCATTTCCAAGGACCCATACGAAG...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTAGTCATTCATGTCTATaGCCTGCTGCCAGTAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIISHSCL*PAASNE Trigger: CTCGTTACTGGCAGCAGGTCATAGACATGAATGACT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTTACCCATTTGAGTTCTaGACAATGCGGCGAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIYPFEF*TMRRAQ Trigger: TTGTGCTCGCCGCATTGTGCAGAACTCAAATGGGTA...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTAAGAAATGCATTGGCTaGCAGCTTGGAAAGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIKKCIG*QLGKLR Trigger: TCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTATGCTGCTGATCCTCTaGGCAAGAAATGCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIMLLIL*ARNALA Trigger: AGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCAT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTCAATCTGGAAGCCAATaGTCTGTAGCTCACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIQSGSQ*SVAHCG Trigger: TCCACAGTGAGCTACAGACCATTGGCTTCCAGATTG...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR TCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTTTGTTAGGTGGGTCCTaGAGACTAAACTTCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIILLGGS*RLNFGI Trigger: GATTCCGAAGTTTAGTCTTCAGGACCCACCTAACAA...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTTGTACGGAATTCTCTTaGAAGACACCTTTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIICTEFS*KTPFCQ Trigger: TTGGCAAAAAGGTGTCTTCCAAGAGAATTCCGTACA...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTTTCAGAACATCTTTTTaGAAGCAGCTTCCACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIFRTSF*KQLPPK Trigger: TTTTGGTGGAAGCTGCTTCCAAAAAGATGTTCTGAA...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTCCACTATTTGTTCCCTaGGTACTTTTGGATCATATA | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIPLFVP*VLLDHI Trigger: TATATGATCCAAAAGTACCCAGGGAACAAATAGTGG...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR GCA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTAGTATCCTTTTTGAATaGAAACCCCAAGATAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: NDKQTTHMRTRLPFPCIISILFE*KPQDSY Trigger: ATAGCTATCTTGGGGTTTGCATTCAAAAAGGATACT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | GTCCATCCCGATGGCCGTTGCCACCTCTTCCACATCGGCGCCTGTTaGTTCACACAGAGCGCTGATGGAGTTGATGCTGCTGATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHPDGRCHLFHIGAC*FTQSADGVDAADPL Trigger: CAGAGGATCAGCAGCATCAACTCCATCAGCGCTCTGTGTGAAGCAACAGGCGCCGATGTGGAAGAGGTGGCAACGGCCATCGGGATGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | CGAGGGCATGGGCGCCATCACACGCTTCGTATGGGTCCTTGGAAATaGTCACCAGTCTGGACACTTGGTCATCCGCTGAGACACCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGHGRHHTLRMGPWK*SPVWTLGHPLRHPD Trigger: ATCCGGGTGTCTCAGCGGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | CTCAGTGCAGATAACGAGGGCATGGGCGCCATCACACGCTTCGTATaGGTCCTTGGAAATGGTCACCAGTCTGGACACTTGGTCATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSADNEGMGAITRFV*VLGNGHQSGHLVIR Trigger: GCGGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCGTTATCTGCACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 90 bp | GGCGGATGCTTTCTGCTGCCCGCACAGGGACTGTGCTTTTCTCCGTaGCAATTTTGTACCCATTTGAGTTCTGCACAATGCGGCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGCFLLPAQGLCFSP*QFCTHLSSAQCGEH Trigger: GTGCTCGCCGCATTGTGCAGAACTCAAATGGGTACAAAATTGTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 90 bp | GATGGAGTTGATGCTGCTGATCCTCTGCGCAAGAAATGCATTGGCTaGCAGCTTGGAAAGCTCCGAGGACCAGGTGTTGGTGGTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGVDAADPLRKKCIG*QLGKLRGPGVGGED Trigger: ATCCTCACCACCAACACCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATCAACTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | GTTGCTTCACACAGAGCGCTGATGGAGTTGATGCTGCTGATCCTCTaGGCAAGAAATGCATTGGCTGCCAGCTTGGAAAGCTCCGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VASHRALMELMLLIL*ARNALAASLESSED Trigger: GTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATCAACTCCATCAGCGCTCTGTGTGAAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | CGCTGGCCTTTAGAAACTTATTCCCAATTCTTTGGTCCATCCCGATaGCCGTTGCCACCTCTTCCACATCGGCGCCTGTTGCTTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: RWPLETYSQFFGPSR*PLPPLPHRRLLLHT Trigger: TGTGTGAAGCAACAGGCGCCGATGTGGAAGAGGTGGCAACGGCCATCGGGATGGACCAAAGAATTGGGAATAAGTTTCTAAAGGCCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | CCACCAAAACCAACGCTGGCCTTTAGAAACTTATTCCCAATTCTTTaGTCCATCCCGATGGCCGTTGCCACCTCTTCCACATCGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPKPTLAFRNLFPIL*SIPMAVATSSTSAP Trigger: AGGCGCCGATGTGGAAGAGGTGGCAACGGCCATCGGGATGGACCAAAGAATTGGGAATAAGTTTCTAAAGGCCAGCGTTGGTTTTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | TCCAGTTCCTTAAACATGTCCCACTCAGTGCAGATAACGAGGGCATaGGCGCCATCACACGCTTCGTATGGGTCCTTGGAAATGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLNMSHSVQITRA*APSHASYGSLEMVT Trigger: GGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCGTTATCTGCACTGAGTGGGACATGTTTAAGGAACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGCATTGGCTGCCAGCTaGGAAAGCTCCGAGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGALAAS*ESSEDQ Trigger: CTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 90 bp | TTTCATCCCCTCCAATCAGGACTCTGTCCGGGTTCTTTAGGTCCTTaGTGGCTGTTCCCTCTGCCAAGAACTCAGGATTGGACAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FHPLQSGLCPGSLGP*WLFPLPRTQDWTAP Trigger: AGGTGCTGTCCAATCCTGAGTTCTTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCGGACAGAGTCCTGATTGGAGGGGATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | GTTGGGCTTTGTGTTGGCATCAAATATGCGGCGGATGCTTTCTGCTaGCCGCACAGGGACTGTGCTTTTCTCCGTGACAATTTTGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLCVGIKYAADAFC*PHRDCAFLRDNFVP Trigger: GGGTACAAAATTGTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS CCA 90 bp | CCGCTGAGACACCCGGATGAGAAAGGTCCACCACTATTTGTTCCCTaGGTACTTTTGGATCATATATGTGGAGGTGTGCACCCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLRHPDEKGPPLFVP*VLLDHICGGVHPRP Trigger: TGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAACAAATAGTGGTGGACCTTTCTCATCCGGGTGTCTCAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 90 bp | ATGGTCACCAGTCTGGACACTTGGTCATCCGCTGAGACACCCGGATaGGAAAGGTCCACCACTATTTGTTCCCTGGGTACTTTTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: MVTSLDTWSSAETPG*ERSTTICSLGTFGS Trigger: TGATCCAAAAGTACCCAGGGAACAAATAGTGGTGGACCTTTCTCATCCGGGTGTCTCAGCGGATGACCAAGTGTCCAGACTGGTGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | ACTCAGGATTGGACAGCACCTGTAAATTCAAGTTGGGCTTTGTGTTaGCATCAAATATGCGGCGGATGCTTTCTGCTGCCCGCACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQDWTAPVNSSWALC*HQICGGCFLLPAQG Trigger: TCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGTCCAATCCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGGGTTCTTTAGGTCCTaGATGGCTGTTCCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGGFFRS*MAVPSA Trigger: GGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTAGAGCGCTGATGGAGTaGATGCTGCTGATCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGRALME*MLLILC Trigger: GCAGAGGATCAGCAGCATCAACTCCATCAGCGCTCT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | CAAGTTGGGCTTTGTGTTGGCATCAAATATGCGGCGGATGCTTTCTaGTGCCCGCACAGGGACTGTGCTTTTCTCCGTGACAATTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVGLCVGIKYAADAF*CPHRDCAFLRDNFV Trigger: TACAAAATTGTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 90 bp | ACAGCACCTGTAAATTCAAGTTGGGCTTTGTGTTGGCATCAAATATaGGGCGGATGCTTTCTGCTGCCCGCACAGGGACTGTGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAPVNSSWALCWHQI*GGCFLLPAQGLCFS Trigger: AGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTGCTTCGTATGGGTCCTaGGAAATGGTCACCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGASYGS*EMVTSL Trigger: CAGACTGGTGACCATTTCCAAGGACCCATACGAAGC...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 90 bp | ACCCGGATGAGAAAGGTCCACCACTATTTGTTCCCTGGGTACTTTTaGATCATATATGTGGAGGTGTGCACCCTCGTCCATCAGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: TRMRKVHHYLFPGYF*IIYVEVCTLVHQVL Trigger: AAGTACCTGATGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAACAAATAGTGGTGGACCTTTCTCATCCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | GGGACTGTGCTTTTCTCCGTGACAATTTTGTACCCATTTGAGTTCTaGACAATGCGGCGAGCACAAGCTTCGATATACTTCAGGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTVLFSVTILYPFEF*TMRRAQASIYFRSA Trigger: AGCAGACCTGAAGTATATCGAAGCTTGTGCTCGCCGCATTGTGCAGAACTCAAATGGGTACAAAATTGTCACGGAGAAAAGCACAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 90 bp | AGGCTCATAAATAGGAAGGGTTGGAGAATTCCATGCATTGATCCTTaGCTCGTTGACATCCACAACCGTAACCCTGATTTCAGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RLINRKGWRIPCIDP*LVDIHNRNPDFRAH Trigger: ATGTGCCCTGAAATCAGGGTTACGGTTGTGGATGTCAACGAGGCAAGGATCAATGCATGGAATTCTCCAACCCTTCCTATTTATGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCAATTTTGTACCCATTaGAGTTCTGCACAATGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGQFCTH*SSAQCG Trigger: GCCGCATTGTGCAGAACTCAAATGGGTACAAAATTG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 90 bp | CACTATTTGTTCCCTGGGTACTTTTGGATCATATATGTGGAGGTGTaGACCCTCGTCCATCAGGTACTTGCTAATGTAGATACTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HYLFPGYFWIIYVEV*TLVHQVLANVDTGG Trigger: TCCTCCAGTATCTACATTAGCAAGTACCTGATGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAACAAATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTCCATCCCATATGTTTTaGTTGGTGTGTTCACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGPSHMF*LVCSQK Trigger: TTTCTGTGAACACACCAACAAAAACATATGGGATGG...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTAATTCAAGTTGGGCTTaGTGTTGGCATCAAATATGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGNSSWA*CWHQIC Trigger: GCATATTTGATGCCAACACAAAGCCCAACTTGAATT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTATTCAGAACATCTTTTaGGAAGCAGCTTCCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGIQNIF*EAASTK Trigger: TTTGGTGGAAGCTGCTTCCAAAAAGATGTTCTGAAT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTTCACCAGTATCCTTTTaGAATGCAAACCCCAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGSPVSF*NANPKI Trigger: TATCTTGGGGTTTGCATTCAAAAAGGATACTGGTGA...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | CCATTTAGTATCAGACAGACACTGGCTACCCTGAAGTACCACGTTATCCCAGGTACACCTTTTTGCCAATaGTTTCAATCTGGAAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PFSIRQTLATLKYHVIPGTPFCQ*FQSGSQ Trigger: TTGGCTTCCAGATTGAAACAATTGGCAAAAAGGTGT...ACCTGGGATAACGTGGTACTTCAGGGTAGCCAGTGTCTGTCTGATACTAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 90 bp | TATCTTCTTATCGGTCACTGTATTAAACAGGCTATCTATGATCCGTaGTGCAAACCTCCTCCTCTGGTAGTCATTCATGTCTATGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: YLLIGHCIKQAIYDP*CKPPPLVVIHVYDL Trigger: CAGGTCATAGACATGAATGACTACCAGAGGAGGAGGTTTGCATCACGGATCATAGATAGCCTGTTTAATACAGTGACCGATAAGAAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGCCAAGAACTCAGGATaGGACAGCACCTGTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIAKNSG*DSTCKF Trigger: GAATTTACAGGTGCTGTCCAATCCTGAGTTCTTGGC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTAAGGTCCACCACTATTaGTTCCCTGGGTACTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIKVHHY*FPGYFW Trigger: CCAAAAGTACCCAGGGAACAAATAGTGGTGGACCTT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGTTCCCTGGGTACTTTaGGATCATATATGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIVPWVL*DHICGG Trigger: ACCTCCACATATATGATCCAAAAGTACCCAGGGAAC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTGTGTACGGAATTCTCTaGGAAGACACCTTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NDKQTTHMRTRLPFPCIIVYGIL*EDTFLP Trigger: TGGCAAAAAGGTGTCTTCCAAGAGAATTCCGTACAC...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS-3UTR CAA 90 bp | AATGATAAGCAGACAACACATATGAGAACGAGACTGCCTTTCCCTTGTATTATTACCTGTAAATTCAAGTaGGGCTTTGTGTTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NDKQTTHMRTRLPFPCIITCKFK*GFVLAS Trigger: TGATGCCAACACAAAGCCCAACTTGAATTTACAGGT...AATAATACAAGGGAAAGGCAGTCTCGTTCTCATATGTGTTGTCTGCTTATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 72 bp | GGGCATGGGCGCCATCACACGCTTCGTATGGGTCCTTaGAAATGGTCACCAGTCTGGACACTTGGTCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: GHGRHHTLRMGP*KWSPVWTLGHP Trigger: CGGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | GCGCTGATGGAGTTGATGCTGCTGATCCTCTGCGCAAGAAATGCATaGGCTGCCAGCTTGGAAAGCTCCGAGGACCAGGTGTTGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALMELMLLILCARNA*AASLESSEDQVLVV Trigger: CACCACCAACACCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATCAACTCCATCAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 72 bp | GGGCGCCATCACACGCTTCGTATGGGTCCTTGGAAATaGTCACCAGTCTGGACACTTGGTCATCCGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRHHTLRMGPWK*SPVWTLGHPLR Trigger: TCTCAGCGGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 72 bp | CTGATCCTCTGCGCAAGAAATGCATTGGCTGCCAGCTaGGAAAGCTCCGAGGACCAGGTGTTGGTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LILCARNALAAS*ESSEDQVLVVR Trigger: CCTCACCACCAACACCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 72 bp | AGGGCATGGGCGCCATCACACGCTTCGTATGGGTCCTaGGAAATGGTCACCAGTCTGGACACTTGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RAWAPSHASYGS*EMVTSLDTWSS Trigger: GGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | TCTTCCACATCGGCGCCTGTTGCTTCACACAGAGCGCTGATGGAGTaGATGCTGCTGATCCTCTGCGCAAGAAATGCATTGGCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTSAPVASHRALME*MLLILCARNALAAS Trigger: GCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATCAACTCCATCAGCGCTCTGTGTGAAGCAACAGGCGCCGATGTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | CAGATAACGAGGGCATGGGCGCCATCACACGCTTCGTATGGGTCCTaGGAAATGGTCACCAGTCTGGACACTTGGTCATCCGCTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: QITRAWAPSHASYGS*EMVTSLDTWSSAET Trigger: TGTCTCAGCGGATGACCAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCGTTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | GATGCTGCTGATCCTCTGCGCAAGAAATGCATTGGCTaGCAGCTTGGAAAGCTCCGAGGACCAGGTGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DAADPLRKKCIG*QLGKLRGPGVG Trigger: ACCAACACCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 72 bp | GATAACGAGGGCATGGGCGCCATCACACGCTTCGTATaGGTCCTTGGAAATGGTCACCAGTCTGGACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: DNEGMGAITRFV*VLGNGHQSGHL Trigger: CAAGTGTCCAGACTGGTGACCATTTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCGTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | CTTTGTGTTGGCATCAAATATGCGGCGGATGCTTTCTaGTGCCCGCACAGGGACTGTGCTTTTCTCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCVGIKYAADAF*CPHRDCAFLRD Trigger: GTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS CAA 90 bp | GTTTCATCCCCTCCAATCAGGACTCTGTCCGGGTTCTTTAGGTCCTaGATGGCTGTTCCCTCTGCCAAGAACTCAGGATTGGACAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VSSPPIRTLSGFFRS*MAVPSAKNSGLDST Trigger: GGTGCTGTCCAATCCTGAGTTCTTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCGGACAGAGTCCTGATTGGAGGGGATGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | TTGATGCTGCTGATCCTCTGCGCAAGAAATGCATTGGCTGCCAGCTaGGAAAGCTCCGAGGACCAGGTGTTGGTGGTGAGGATCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LMLLILCARNALAAS*ESSEDQVLVVRIFS Trigger: GGAAAAGATCCTCACCACCAACACCTGGTCCTCGGAGCTTTCCAAGCTGGCAGCCAATGCATTTCTTGCGCAGAGGATCAGCAGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | CCTTTAGAAACTTATTCCCAATTCTTTGGTCCATCCCGATGGCCGTaGCCACCTCTTCCACATCGGCGCCTGTTGCTTCACACAGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLETYSQFFGPSRWP*PPLPHRRLLLHTER Trigger: GCGCTCTGTGTGAAGCAACAGGCGCCGATGTGGAAGAGGTGGCAACGGCCATCGGGATGGACCAAAGAATTGGGAATAAGTTTCTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 72 bp | AGTCTGGACACTTGGTCATCCGCTGAGACACCCGGATaGGAAAGGTCCACCACTATTTGTTCCCTGGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: SLDTWSSAETPG*ERSTTICSLGT Trigger: AGTACCCAGGGAACAAATAGTGGTGGACCTTTCTCATCCGGGTGTCTCAGCGGATGACCAAGTGTCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 72 bp | GGAAATGGTCACCAGTCTGGACACTTGGTCATCCGCTaGGACACCCGGATGAGAAAGGTCCACCACTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: GNGHQSGHLVIR*DTRMRKVHHYL Trigger: CAAATAGTGGTGGACCTTTCTCATCCGGGTGTCTCAGCGGATGACCAAGTGTCCAGACTGGTGACCATTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | GCGGCGAGCACAAGCTTCGATATACTTCAGGTCTGCTaGCCGGCCTTTTCCCATCCCATATGTTTTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AASTSFDILQVC*PAFSHPICFCW Trigger: CCAACAAAAACATATGGGATGGGAAAAGGCCGGGCAGCAGACCTGAAGTATATCGAAGCTTGTGCTCGCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 72 bp | TGTGTTGGCATCAAATATGCGGCGGATGCTTTCTGCTaGCCGCACAGGGACTGTGCTTTTCTCCGTGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: CVGIKYAADAFC*PHRDCAFLRDN Trigger: ATTGTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 72 bp | AGTTGGGCTTTGTGTTGGCATCAAATATGCGGCGGATaGTTTCTGCTGCCCGCACAGGGACTGTGCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SWALCWHQICGG*FLLPAQGLCFS Trigger: AGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS GCA 72 bp | GTGTTGGTGGTGAGGATCTTTTCCTTAGGAACCCAGTaGTCATACACAGCACACAGAGCCCGAACGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLVVRIFSLGTQ*SYTAHRARTAF Trigger: GAAAGCCGTTCGGGCTCTGTGTGCTGTGTATGAGCACTGGGTTCCTAAGGAAAAGATCCTCACCACCAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 72 bp | TTAAACATGTCCCACTCAGTGCAGATAACGAGGGCATaGGCGCCATCACACGCTTCGTATGGGTCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LNMSHSVQITRA*APSHASYGSLE Trigger: TTCCAAGGACCCATACGAAGCGTGTGATGGCGCCCATGCCCTCGTTATCTGCACTGAGTGGGACATGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 72 bp | CCTCCAATCAGGACTCTGTCCGGGTTCTTTAGGTCCTaGATGGCTGTTCCCTCTGCCAAGAACTCAGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: PPIRTLSGFFRS*MAVPSAKNSGL Trigger: CAATCCTGAGTTCTTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCGGACAGAGTCCTGATTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | AACTCAGGATTGGACAGCACCTGTAAATTCAAGTTGGGCTTTGTGTaGGCATCAAATATGCGGCGGATGCTTTCTGCTGCCCGCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: NSGLDSTCKFKLGFV*ASNMRRMLSAARTG Trigger: CCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGTCCAATCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | GTAAATTCAAGTTGGGCTTTGTGTTGGCATCAAATATaGGGCGGATGCTTTCTGCTGCCCGCACAGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VNSSWALCWHQI*GGCFLLPAQGL Trigger: CAGTCCCTGTGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS CAA 90 bp | CCAAGAACTCAGGATTGGACAGCACCTGTAAATTCAAGTTGGGCTTaGTGTTGGCATCAAATATGCGGCGGATGCTTTCTGCTGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRTQDWTAPVNSSWA*CWHQICGGCFLLPA Trigger: TGCGGGCAGCAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGTCCAATCCTGAGTTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | CACCCGGATGAGAAAGGTCCACCACTATTTGTTCCCTGGGTACTTTaGGATCATATATGTGGAGGTGTGCACCCTCGTCCATCAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: HPDEKGPPLFVPWVL*DHICGGVHPRPSGT Trigger: AGTACCTGATGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAACAAATAGTGGTGGACCTTTCTCATCCGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | AATGCGGCGAGCACAAGCTTCGATATACTTCAGGTCTaGTGCCCGGCCTTTTCCCATCCCATATGTTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NAASTSFDILQV*CPAFSHPICFC Trigger: ACAAAAACATATGGGATGGGAAAAGGCCGGGCAGCAGACCTGAAGTATATCGAAGCTTGTGCTCGCCGCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS CAA 72 bp | AGGGTTGGAGAATTCCATGCATTGATCCTTGCCTCGTaGACATCCACAACCGTAACCCTGATTTCAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVGEFHALILAS*TSTTVTLISGH Trigger: GTGCCCTGAAATCAGGGTTACGGTTGTGGATGTCAACGAGGCAAGGATCAATGCATGGAATTCTCCAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS TCA 72 bp | TTTCTGCTGCCCGCACAGGGACTGTGCTTTTCTCCGTaGCAATTTTGTACCCATTTGAGTTCTGCACAATGC | + |
|
Preference number: 6 (lower is better) Translates to: FLLPAQGLCFSP*QFCTHLSSAQC Trigger: GCATTGTGCAGAACTCAAATGGGTACAAAATTGTCACGGAGAAAAGCACAGTCCCTGTGCGGGCAGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031103.14 ENSMUST00000131263.3 |
||
| CDS CAA 72 bp | CAGGATTGGACAGCACCTGTAAATTCAAGTTGGGCTTaGTGTTGGCATCAAATATGCGGCGGATGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDWTAPVNSSWA*CWHQICGGCFL Trigger: CAGAAAGCATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGTCCAATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 90 bp | GGAATCTCACCAGGAGTGTACGGAATTCTCTTGGAAGACACCTTTTaGCCAATTGTTTCAATCTGGAAGCCAATGGTCTGTAGCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GISPGVYGILLEDTF*PIVSIWKPMVCSSL Trigger: CAGTGAGCTACAGACCATTGGCTTCCAGATTGAAACAATTGGCAAAAAGGTGTCTTCCAAGAGAATTCCGTACACTCCTGGTGAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS GCA 72 bp | TTCCCTGGGTACTTTTGGATCATATATGTGGAGGTGTaGACCCTCGTCCATCAGGTACTTGCTAATGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPGYFWIIYVEV*TLVHQVLANVD Trigger: ATCTACATTAGCAAGTACCTGATGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CCA 72 bp | ACTATTTGTTCCCTGGGTACTTTTGGATCATATATGTaGAGGTGTGCACCCTCGTCCATCAGGTACTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TICSLGTFGSYM*RCAPSSIRYLL Trigger: TAGCAAGTACCTGATGGACGAGGGTGCACACCTCCACATATATGATCCAAAAGTACCCAGGGAACAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 72 bp | AAGAACTCAGGATTGGACAGCACCTGTAAATTCAAGTaGGGCTTTGTGTTGGCATCAAATATGCGGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: KNSGLDSTCKFK*GFVLASNMRRM Trigger: CATCCGCCGCATATTTGATGCCAACACAAAGCCCAACTTGAATTTACAGGTGCTGTCCAATCCTGAGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS TCA 72 bp | ATCGGTCACTGTATTAAACAGGCTATCTATGATCCGTaGTGCAAACCTCCTCCTCTGGTAGTCATTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: IGHCIKQAIYDP*CKPPPLVVIHV Trigger: GACATGAATGACTACCAGAGGAGGAGGTTTGCATCACGGATCATAGATAGCCTGTTTAATACAGTGACCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||
| CDS CAA 72 bp | ATACTGGAGGATTCTCTGGTATCACCAGTATCCTTTTaGAATGCAAACCCCAAGATAGCTATCTTCTTATCG | + |
|
Preference number: 6 (lower is better) Translates to: ILEDSLVSPVSF*NANPKIAIFLS Trigger: CGATAAGAAGATAGCTATCTTGGGGTTTGCATTCAAAAAGGATACTGGTGATACCAGAGAATCCTCCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031103.14 |
||