Pregenerated sensors for UGCG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028381Ensembl transcript IDs: ENSMUST00000030074.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACACAGGGGAGAGGCCATGACTTCTCTCATGGAGCTGCTGTTCTaGCCGTACAGATTCAGAGGAACTCAGGTAAGAAACTTTCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: SHRGEAMTSLMELLF*PYRFRGTQVRNFPY Trigger: GTAGGGAAAGTTTCTTACCTGAGTTCCTCTGAATCTGTACGGGCAGAACAGCAGCTCCATGAGAGAAGTCATGGCCTCTCCCCTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR TCA 90 bp | AACAGCAAGCATCAGATGGATAACACGCCCTCGAATTCGGAAGGATaGGCAAACTTCTACTTAAGAAGACGGGGAAAGGCCGATGCACTG | + |
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Preference number: 1 (lower is better) Translates to: NSKHQMDNTPSNSEG*ANFYLRRRGKADAL Trigger: CAGTGCATCGGCCTTTCCCCGTCTTCTTAAGTAGAAGTTTGCTCATCCTTCCGAATTCGAGGGCGTGTTATCCATCTGATGCTTGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR TCA 90 bp | CGGGAGCAGGGAGGGAAAGATTCAGCTCTCCTAATTACAGCACAGTaGTTAATATGGTTCAAGACAGAACCAACGACAGTTGGTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: REQGGKDSALLITAQ*LIWFKTEPTTVGPK Trigger: TTTTGGACCAACTGTCGTTGGTTCTGTCTTGAACCATATTAATCACTGTGCTGTAATTAGGAGAGCTGAATCTTTCCCTCCCTGCTCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR CCA 90 bp | TACAGCACAGTGATTAATATGGTTCAAGACAGAACCAACGACAGTTaGTCCAAAAGATGCCTTCAATTCATGGTTACCATTAAAAACCAA | + |
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Preference number: 1 (lower is better) Translates to: YSTVINMVQDRTNDS*SKRCLQFMVTIKNQ Trigger: TTGGTTTTTAATGGTAACCATGAATTGAAGGCATCTTTTGGACCAACTGTCGTTGGTTCTGTCTTGAACCATATTAATCACTGTGCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTTCTCAGCCAGCGGGCGTCTCTCTGTATAGCATTTACTTCACACAGGGGTTCCATTCCACACTGTaGGCCATCAGTCACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: KVSQPAGVSLYSIYFTQGFHSTL*AISHRG Trigger: ACCTCTGTGACTGATGGCGCACAGTGTGGAATGGAA...CCCCTGTGTGAAGTAAATGCTATACAGAGAGACGCCCGCTGGCTGAGAAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAACACGCACACAGTCGACTTAGCTTGATACTGATTGATTGGAAGAGTCAAACAGGGGAGAGGCCATaGCTTCTCTCATGGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: NQHAHSRLSLILIDWKSQTGERP*LLSWSC Trigger: GCAGCTCCATGAGAGAAGTCATGGCCTCTCCCCTGT...TTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCAAAGGGCATCCACCAAACTCCACTAAACAAACCGACGGACAACAAACGTCAAACCTAGGAATATaGATCCAAGCCTTTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QCKGHPPNSTKQTDGQQTSNLGI*IQAFAH Trigger: ATGAGCAAAGGCTTGGATGCATATTCCTAGGTTTGA...CGTTTGTTGTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGAGTTACTCTCTGTGTACTCAAAGCTTCGCTTTAAGGAAATACTTCATCTTCTCTCATGGAGCTaGTGTTCTGCCCGTACAGAT | + |
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Preference number: 2 (lower is better) Translates to: NKELLSVYSKLRFKEILHLLSWS*CSARTD Trigger: ATCTGTACGGGCAGAACAGCAGCTCCATGAGAGAAG...ATGAAGTATTTCCTTAAAGCGAAGCTTTGAGTACACAGAGAGTAACTCTTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGAGAACCAACGACAGTTaGTCCAAAAGATGCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: IWTPTVLVWCFDILQYFLRTNDS*SKRCLQ Trigger: TTGAAGGCATCTTTTGGACCAACTGTCGTTGGTTCT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAACACGCACACAGTCGACTTAGCTTGATACTGATTGATTGGAAGAGTCAATTTGCTTTTCACAGATaGAAGTGCCATGCAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: NQHAHSRLSLILIDWKSQFAFHR*KCHANK Trigger: TTTATTTGCATGGCACTTGCATCTGTGAAAAGCAAA...TTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAGTTACTCTCTGTGTACTCAAAGCTTCGCTTTAAGGAAATACTTCATCATTTACAGCTAGGCTaGCCTAGTCTACTGTCATAC | + |
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Preference number: 2 (lower is better) Translates to: NKELLSVYSKLRFKEILHHLQLG*PSLLSY Trigger: GTATGACAGTAGACTAGGCCAGCCTAGCTGTAAATG...ATGAAGTATTTCCTTAAAGCGAAGCTTTGAGTACACAGAGAGTAACTCTTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGAGTTACTCTCTGTGTACTCAAAGCTTCGCTTTAAGGAAATACTTCATACAGCAAGCATCAGATaGATAACACGCCCTCGAATT | + |
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Preference number: 2 (lower is better) Translates to: NKELLSVYSKLRFKEILHTASIR*ITRPRI Trigger: AATTCGAGGGCGTGTTATCCATCTGATGCTTGCTGT...ATGAAGTATTTCCTTAAAGCGAAGCTTTGAGTACACAGAGAGTAACTCTTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTTATTATAAATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTAGTTGGTCCAAAAGATaGCTTCAATTCATGGTTACC | + |
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Preference number: 2 (lower is better) Translates to: TVYYKSGLLQFWCGALTFSWSKR*LQFMVT Trigger: GGTAACCATGAATTGAAGGCATCTTTTGGACCAACT...AAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGATTTATAATAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGTTGATACTGATTGATTaGAAGAGTCAACCTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: IWTPTVLVWCFDILQYFLLILID*KSQPHH Trigger: ATGATGAGGTTGACTCTTCCAATCAATCAGTATCAA...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR GCA 72 bp | GGAGAGGCCATGACTTCTCTCATGGAGCTGCTGTTCTaGCCGTACAGATTCAGAGGAACTCAGGTAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: GEAMTSLMELLF*PYRFRGTQVRN Trigger: GTTTCTTACCTGAGTTCCTCTGAATCTGTACGGGCAGAACAGCAGCTCCATGAGAGAAGTCATGGCCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR CCA 72 bp | AGCTGCCAAGTGCTGGGGTTAACAGCAAGCATCAGATaGATAACACGCCCTCGAATTCGGAAGGATGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SCQVLGLTASIR*ITRPRIRKDEQ Trigger: TTGCTCATCCTTCCGAATTCGAGGGCGTGTTATCCATCTGATGCTTGCTGTTAACCCCAGCACTTGGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | TTTACTTCACACAGGGGAGAGGCCATGACTTCTCTCATGGAGCTGCTGTTCTGCCACAAGATATACTATTaGGCCAAGACTACAGACATG | + |
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Preference number: 3 (lower is better) Translates to: FTSHRGEAMTSLMELLFCHKIYY*AKTTDM Trigger: CATGTCTGTAGTCTTGGCCAAATAGTATATCTTGTG...GCAGAACAGCAGCTCCATGAGAGAAGTCATGGCCTCTCCCCTGTGTGAAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTTCTCAGCCAGCGGGCGTCTCTCTGTATAGCATTTACTTCACACAGGGGCTAGAACCAATTGCCTaGATTCTCTACTTCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: KVSQPAGVSLYSIYFTQGLEPIA*ILYFHK Trigger: CTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAG...CCCCTGTGTGAAGTAAATGCTATACAGAGAGACGCCCGCTGGCTGAGAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR TCA 72 bp | TGCTCTGCAACAACTACAAGAGGTAGGCATAAAGCATaGAAAAGTTTCTCAGCCAGCGGGCGTCTCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: CSATTTRGRHKA*KSFSASGRLSV Trigger: TACAGAGAGACGCCCGCTGGCTGAGAAACTTTTTCATGCTTTATGCCTACCTCTTGTAGTTGTTGCAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR GCA 72 bp | GAAACTTTCCCTACTGAAGGATACTGTCATAGTGTCTaGTGCAGAGCAGTCCTGTATATGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ETFPTEGYCHSV*CRAVLYMCVCV Trigger: CACACACACACACATATACAGGACTGCTCTGCAGCAGACACTATGACAGTATCCTTCAGTAGGGAAAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGACTGCGCAGCTCTCCTaGGGGATAATAATACCCATT | + |
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Preference number: 3 (lower is better) Translates to: IWTPTVLVWCFDILQYFLTAQLS*GIIIPI Trigger: AATGGGTATTATTATCCCCAAGGAGAGCTGCGCAGT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR CCA 72 bp | CGGAGAGGAAAGTGTAGCATGCATTTACAGCTAGGCTaGCCTAGTCTACTGTCATACAAACTGAATACAAAA | + |
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Preference number: 3 (lower is better) Translates to: RRGKCSMHLQLG*PSLLSYKLNTK Trigger: TTTTGTATTCAGTTTGTATGACAGTAGACTAGGCCAGCCTAGCTGTAAATGCATGCTACACTTTCCTCTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTTATTATAAATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTAGTCTGTCCAGCCATTaGGATTTTGTTTCTTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: TVYYKSGLLQFWCGALTFSLSSH*DFVSLP Trigger: GGGCAAAGAAACAAAATCCAAATGGCTGGACAGACT...AAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGATTTATAATAAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGACTTCTAACTTCTATTaGCTCTGCAACAACTACAAG | + |
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Preference number: 3 (lower is better) Translates to: IWTPTVLVWCFDILQYFLTSNFY*LCNNYK Trigger: CTTGTAGTTGTTGCAGAGCAAATAGAAGTTAGAAGT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGATCTTCACTCCAAACTaGCTAAACAAAGAGTTACTC | + |
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Preference number: 3 (lower is better) Translates to: IWTPTVLVWCFDILQYFLIFTPN*LNKELL Trigger: GAGTAACTCTTTGTTTAGCAAGTTTGGAGTGAAGAT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR GCA 72 bp | GTTCAAGACAGAACCAACGACAGTTGGTCCAAAAGATaGCTTCAATTCATGGTTACCATTAAAAACCAATCT | + |
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Preference number: 3 (lower is better) Translates to: VQDRTNDSWSKR*LQFMVTIKNQS Trigger: AGATTGGTTTTTAATGGTAACCATGAATTGAAGGCATCTTTTGGACCAACTGTCGTTGGTTCTGTCTTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR CCA 72 bp | GTGATTAATATGGTTCAAGACAGAACCAACGACAGTTaGTCCAAAAGATGCCTTCAATTCATGGTTACCATT | + |
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Preference number: 3 (lower is better) Translates to: VINMVQDRTNDS*SKRCLQFMVTI Trigger: AATGGTAACCATGAATTGAAGGCATCTTTTGGACCAACTGTCGTTGGTTCTGTCTTGAACCATATTAATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR TCA 72 bp | AAGAGCAGATACCAAAACATACATGTGATAAACTACTaGAGGGAGACCCTGGAAAGTGTCTCTATAAACATA | + |
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Preference number: 3 (lower is better) Translates to: KSRYQNIHVINY*RETLESVSINI Trigger: TATGTTTATAGAGACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTGCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCAAAGGGCATCCACCAAACTCCACTAAACAAACCGACGGACAACAAACGACATACGGCAGCCCGTaGACCAACCCCACTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QCKGHPPNSTKQTDGQQTTYGSP*TNPTFS Trigger: AGAGAAAGTGGGGTTGGTCCACGGGCTGCCGTATGT...CGTTTGTTGTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | AACCAACACGCACACAGTCGACTTAGCTTGATACTGATTGATTGGAAGAGTCAAATGAGCCCTCCTGCCTaGTCTAGCACATCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NQHAHSRLSLILIDWKSQMSPPA*SSTSFL Trigger: GAGGAAGGATGTGCTAGATCAGGCAGGAGGGCTCAT...TTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTACTGAAGGATACTGTCATAGTGTCTGCTGCAGAGCAGTCCTGTATATGTCCCATCTGAATACATaGTGGGCTGCCCACCCAATA | + |
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Preference number: 4 (lower is better) Translates to: FPTEGYCHSVCCRAVLYMSHLNT*WAAHPI Trigger: TATTGGGTGGGCAGCCCACCATGTATTCAGATGGGA...CATATACAGGACTGCTCTGCAGCAGACACTATGACAGTATCCTTCAGTAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTACTGAAGGATACTGTCATAGTGTCTGCTGCAGAGCAGTCCTGTATATGAACTTGAGTAGACATTaGAAACCTCCAACCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: FPTEGYCHSVCCRAVLYMNLSRH*KPPTSV Trigger: GACCGAGGTTGGAGGTTTTCAATGTCTACTCAAGTT...CATATACAGGACTGCTCTGCAGCAGACACTATGACAGTATCCTTCAGTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGATCCACCCCCTTCAGTaGCTTCAGAAGAGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: IWTPTVLVWCFDILQYFLIHPLQ*LQKRDT Trigger: GGTGTCTCTCTTCTGAAGCCACTGAAGGGGGTGGAT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR GCA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTAGACACCAGGGAGCTTaGTATACGGCTGTTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCRHQGA*YTAVCL Trigger: CAGACAAACAGCCGTATAGCAAGCTCCCTGGTGTCT...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCAAAGGGCATCCACCAAACTCCACTAAACAAACCGACGGACAACAAACGACATACATCAATGGCTaGATCATCATGATCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QCKGHPPNSTKQTDGQQTTYING*IIMILY Trigger: GTACAAGATCATGATGATCCAGCCATTGATGTATGT...CGTTTGTTGTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | AACCAACACGCACACAGTCGACTTAGCTTGATACTGATTGATTGGAAGAGTCAAATACCTGCTCTAAGGTaGCAGCAAAGCCTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NQHAHSRLSLILIDWKSQIPALR*QQSLVC Trigger: ACAGACAAGGCTTTGCTGCCACCTTAGAGCAGGTAT...TTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | AAATCCCACTTCCTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACCTGTTGCCTTCTTGTTaGGGTGTAACCGGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KSHFLEPIALILYFHKIYLLPSC*GVTGCR Trigger: TCTACACCCGGTTACACCTCAACAAGAAGGCAACAG...GTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAGGAAGTGGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | AAATCCCACTTCCTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACTCCCCGTCACACATTTaGAGCCAGTTACATTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KSHFLEPIALILYFHKIYSPSHI*SQLHWQ Trigger: CTGCCAATGTAACTGGCTTCAAATGTGTGACGGGGA...GTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAGGAAGTGGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR GCA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGATGATGGACATGAAATaGATCAGCCACAGCACCACG | + |
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Preference number: 4 (lower is better) Translates to: IWTPTVLVWCFDILQYFLMMDMK*ISHSTT Trigger: CGTGGTGCTGTGGCTGATGCATTTCATGTCCATCAT...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | CTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACTATTTGGCCAAGAACCATGCCAGGCAGTaGCACATGAAGAAGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LEPIALILYFHKIYYLAKNHARQ*HMKKTM Trigger: CATGGTCTTCTTCATGTGCCACTGCCTGGCATGGTT...CTTGGCCAAATAGTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | AAATCCCACTTCCTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACCACCCTGGACACCCCTaGGTTGAATGTAGTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: KSHFLEPIALILYFHKIYHPGHP*VECSQI Trigger: TATTTGACTACATTCAACTCAGGGGTGTCCAGGGTG...GTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAGGAAGTGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR GCA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTACCTCGGTCGGCTATTaGTTTGGCCATAAAGTAATC | + |
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Preference number: 4 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCTSVGY*FGHKVI Trigger: GATTACTTTATGGCCAAAGCAATAGCCGACCGAGGT...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| 3UTR CAA 72 bp | AGGAAAACAAACCAACACGCACACAGTCGACTTAGCTaGATACTGATTGATTGGAAGAGTCAACCTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: RKTNQHAHSRLS*ILIDWKSQPHH Trigger: ATGATGAGGTTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTTTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | AAATCCCACTTCCTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACCATCTGAATACATGGTaGGCTGCCCACCCAATAATT | + |
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Preference number: 4 (lower is better) Translates to: KSHFLEPIALILYFHKIYHLNTW*AAHPII Trigger: AATTATTGGGTGGGCAGCCCACCATGTATTCAGATG...GTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAGGAAGTGGGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | CTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACTATTTGGCCAAGATGGCTGGATCATCATaGTCTTGTACACAAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LEPIALILYFHKIYYLAKMAGSS*SCTQRS Trigger: ACTCCTTTGTGTACAAGATCATGATGATCCAGCCAT...CTTGGCCAAATAGTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTATAGGATCTTGGGTGTaGAGTTCCAAAATATACCTG | + |
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Preference number: 4 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCIGSWV*SSKIYL Trigger: CAGGTATATTTTGGAACTTCACACCCAAGATCCTAT...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTTTTTGCATGGCAACTTaGGTAGACATTGAAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCFCMAT*VDIENL Trigger: GAGGTTTTCAATGTCTACTCAAGTTGCCATGCAAAA...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTGGCAACAAAGCATTCTaGAATTGGCTCACAAATTAT | + |
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Preference number: 4 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCGNKAF*NWLTNY Trigger: ATAATTTGTGAGCCAATTTCAGAATGCTTTGTTGCC...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | AACCAACACGCACACAGTCGACTTAGCTTGATACTGATTGATTGGAAGAGTCAAGGAGTACTTCATATTTaGGATAATCCAGTTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NQHAHSRLSLILIDWKSQGVLHI*DNPVQR Trigger: TCTTTGAACTGGATTATCCCAAATATGAAGTACTCC...TTGACTCTTCCAATCAATCAGTATCAAGCTAAGTCGACTGTGTGCGTGTTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR TCA 90 bp | AACAAAGAGTTACTCTCTGTGTACTCAAAGCTTCGCTTTAAGGAAATACTTCATTCAATTTGGTCCACCTaGTCATTCTGGATTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: NKELLSVYSKLRFKEILHSIWST*SFWIET Trigger: AGTTTCAATCCAGAATGATCAGGTGGACCAAATTGA...ATGAAGTATTTCCTTAAAGCGAAGCTTTGAGTACACAGAGAGTAACTCTTTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAAGTGTCTCTATAAACATAATTTATAACACTTCCATTCCACACTGTGCGTCTTACATACATCAATaGCTGGATCATCATGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LESVSINIIYNTSIPHCASYIHQ*LDHHDL Trigger: AAGATCATGATGATCCAGCCATTGATGTATGTAAGA...CGCACAGTGTGGAATGGAAGTGTTATAAATTATGTTTATAGAGACACTTTCCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | TTTACTTCACACAGGGGAGAGGCCATGACTTCTCTCATGGAGCTGCTGTTCTGCGGTGGCAGCAAAGCCTaGTCTGTCGGCTACATACGG | + |
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Preference number: 5 (lower is better) Translates to: FTSHRGEAMTSLMELLFCGGSKA*SVGYIR Trigger: CCGTATGTAGCCGACAGACAAGGCTTTGCTGCCACC...GCAGAACAGCAGCTCCATGAGAGAAGTCATGGCCTCTCCCCTGTGTGAAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS GCA 90 bp | GCCACCCTGGACACCCCTGAGTTGAATGTAGTCAAATATAAACCATaGCAGGCAGTGGCACATGAAGAAGACCATGATATCCCATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: ATLDTPELNVVKYKP*QAVAHEEDHDIPSE Trigger: TTCAGATGGGATATCATGGTCTTCTTCATGTGCCACTGCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTCCAGGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS TCA 90 bp | CTAGCACATCCTTCCTCATCAAACAAGACATCCCCGTCACACATTTaGAGCCAGTTACATTGGCAGAGATATAGGATCTTGGGTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LAHPSSSNKTSPSHI*SQLHWQRYRILGVK Trigger: CTTCACACCCAAGATCCTATATCTCTGCCAATGTAACTGGCTTCAAATGTGTGACGGGGATGTCTTGTTTGATGAGGAAGGATGTGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGGAGACACCAGGGAGCTaGCTATACGGCTGTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: IWTPTVLVWCFDILQYFLETPGS*LYGCLS Trigger: AGACAAACAGCCGTATAGCAAGCTCCCTGGTGTCTC...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | CAGTGCAAAGGGCATCCACCAAACTCCACTAAACAAACCGACGGACAACAAACGCAGAGATATAGGATCTaGGGTGTGAAGTTCCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: QCKGHPPNSTKQTDGQQTQRYRI*GVKFQN Trigger: ATTTTGGAACTTCACACCCAAGATCCTATATCTCTG...CGTTTGTTGTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | CAGTGCAAAGGGCATCCACCAAACTCCACTAAACAAACCGACGGACAACAAACGCAGCATAATCAAGTTTaGAAAAACACAGTGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QCKGHPPNSTKQTDGQQTQHNQV*KNTVCH Trigger: GTGGCACACTGTGTTTTTCAAAACTTGATTATGCTG...CGTTTGTTGTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTTACAGTATTTCTTGTTGTCTGTTGCCTTCTaGTTGAGGTGTAACCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: IWTPTVLVWCFDILQYFLLSVAF*LRCNRV Trigger: CACCCGGTTACACCTCAACAAGAAGGCAACAGACAA...CAAGAAATACTGTAAAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | ACAGTTTATTATAAATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTATCCCCGTCACACATTaGAAGCCAGTTACATTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TVYYKSGLLQFWCGALTFIPVTH*KPVTLA Trigger: TGCCAATGTAACTGGCTTCAAATGTGTGACGGGGAT...AAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGATTTATAATAAACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | CTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACTATTTGGCCAAGGTACGAACCAGAGTTTaGCATGGCAACTTGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LEPIALILYFHKIYYLAKVRTRV*HGNLSR Trigger: TCTACTCAAGTTGCCATGCAAAACTCTGGTTCGTAC...CTTGGCCAAATAGTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | CAGATACCAAAACATACATGTGATAAACTACTGAAGGGAGACCCTGGAAAGTGTAAGAATGTCTCCAAGTaGTTGATTAGGTTAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: QIPKHTCDKLLKGDPGKCKNVSK*LIRLGS Trigger: GGATCCTAACCTAATCAACAACTTGGAGACATTCTT...ACACTTTCCAGGGTCTCCCTTCAGTAGTTTATCACATGTATGTTTTGGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | AAATCCCACTTCCTAGAACCAATTGCCTTGATTCTCTACTTCCACAAGATATACTGGATCATCATGATCTaGTACACAAAGGAGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: KSHFLEPIALILYFHKIYWIIMI*YTKEYF Trigger: GAAGTACTCCTTTGTGTACAAGATCATGATGATCCA...GTATATCTTGTGGAAGTAGAGAATCAAGGCAATTGGTTCTAGGAAGTGGGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS-3UTR CAA 90 bp | ACAGTTTATTATAAATCTGGACTCCTACAGTTCTGGTGTGGTGCTTTGACATTTCTGGACACCCCTGAGTaGAATGTAGTCAAATATAAA | + |
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Preference number: 5 (lower is better) Translates to: TVYYKSGLLQFWCGALTFLDTPE*NVVKYK Trigger: TTTATATTTGACTACATTCAACTCAGGGGTGTCCAG...AAATGTCAAAGCACCACACCAGAACTGTAGGAGTCCAGATTTATAATAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS CAA 90 bp | GGATCCACCCCCTTCAGTGGCTTCAGAAGAGAGACACCAGGGAGCTaGCTATACGGCTGTTTGTCTGTTGCCTTCTTGTTGAGGTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: GSTPFSGFRRETPGS*LYGCLSVAFLLRCN Trigger: GTTACACCTCAACAAGAAGGCAACAGACAAACAGCCGTATAGCAAGCTCCCTGGTGTCTCTCTTCTGAAGCCACTGAAGGGGGTGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS CAA 72 bp | CCCTTCAGTGGCTTCAGAAGAGAGACACCAGGGAGCTaGCTATACGGCTGTTTGTCTGTTGCCTTCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PFSGFRRETPGS*LYGCLSVAFLL Trigger: CAACAAGAAGGCAACAGACAAACAGCCGTATAGCAAGCTCCCTGGTGTCTCTCTTCTGAAGCCACTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS TCA 72 bp | CGAACCAGAGTTTTGCATGGCAACTTGAGTAGACATTaGAAACCTCCAACCTCGGTCGGCTATTGCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: RTRVLHGNLSRH*KPPTSVGYCFG Trigger: GCCAAAGCAATAGCCGACCGAGGTTGGAGGTTTTCAATGTCTACTCAAGTTGCCATGCAAAACTCTGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS TCA 72 bp | CCTTCCTCATCAAACAAGACATCCCCGTCACACATTTaGAGCCAGTTACATTGGCAGAGATATAGGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSNKTSPSHI*SQLHWQRYRIL Trigger: CAAGATCCTATATCTCTGCCAATGTAACTGGCTTCAAATGTGTGACGGGGATGTCTTGTTTGATGAGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS TCA 72 bp | GGTCCACCTGATCATTCTGGATTGAAACTGAGAAATTaGGTACGAACCAGAGTTTTGCATGGCAACTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPPDHSGLKLRN*VRTRVLHGNLS Trigger: ACTCAAGTTGCCATGCAAAACTCTGGTTCGTACTCAATTTCTCAGTTTCAATCCAGAATGATCAGGTGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS CAA 90 bp | TCCAAGCAATTTCTTACATACATCAATGGCTGGATCATCATGATCTaGTACACAAAGGAGTACTTCATATTTGGGATAATCCAGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SKQFLTYINGWIIMI*YTKEYFIFGIIQFK Trigger: TTTGAACTGGATTATCCCAAATATGAAGTACTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAAGAAATTGCTTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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| CDS TCA 72 bp | AGCAATTTCTTACATACATCAATGGCTGGATCATCATaGTCTTGTACACAAAGGAGTACTTCATATTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SNFLHTSMAGSS*SCTQRSTSYLG Trigger: TCCCAAATATGAAGTACTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAAGAAATTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030074.8 |
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