Pregenerated sensors for UFL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040359Ensembl transcript IDs: ENSMUST00000038705.8, ENSMUST00000102994.10
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTaGTGCTGCAAATCATCACCATCAACAACAACAACAACAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: RKHWLSWDWRYKASM*CCKSSPSTTTTTAT Trigger: TGTTGCTGTTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR GCA 90 bp | CATGTGAAATCATTTATATTCTTTTATGTGTATGGGTGTTTTGCCTaGATGTGCGCCTATACATCTTGTGTATGCTTAGTGCCCGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: HVKSFIFFYVYGCFA*MCAYTSCVCLVPGV Trigger: CACTCCGGGCACTAAGCATACACAAGATGTATAGGCGCACATGCAGGCAAAACACCCATACACATAAAAGAATATAAATGATTTCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR GCA 90 bp | TACCCATGTGAAATCATTTATATTCTTTTATGTGTATGGGTGTTTTaGCTGCATGTGCGCCTATACATCTTGTGTATGCTTAGTGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: YPCEIIYILLCVWVF*LHVRLYILCMLSAR Trigger: CCGGGCACTAAGCATACACAAGATGTATAGGCGCACATGCAGGCAAAACACCCATACACATAAAAGAATATAAATGATTTCACATGGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR CAA 90 bp | AAGCTTCCCATAAAGTCTGCATCTATTACCACACCACTACTTTATTaGACTTGTGTGGGGCGGGTTGGAGGGGGAGTAGGTGTGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: KLPIKSASITTPLLY*TCVGRVGGGVGVLS Trigger: ACTCAGCACACCTACTCCCCCTCCAACCCGCCCCACACAAGTCAAATAAAGTAGTGGTGTGGTAATAGATGCAGACTTTATGGGAAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| 3UTR-3UTR GCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAACACTGTTCTGCGGCGTaGCTCACGCTTTCCCTCACG | + |
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Preference number: 2 (lower is better) Translates to: DTKHPCDAANHHHQQQQQHCSAA*LTLSLT Trigger: CGTGAGGGAAAGCGTGAGGCACGCCGCAGAACAGTG...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR GCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTGCTTCCCATAAAGTCTaGATCTATTACCACACCACT | + |
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Preference number: 2 (lower is better) Translates to: GTLWLALFEHSNACFFSVASHKV*IYYHTT Trigger: AGTGGTGTGGTAATAGATGCAGACTTTATGGGAAGC...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTCTTAGAACTCTAAACTaGGCTAATGACAGAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: PESIGFPGTGDTKHPCDALRTLN*ANDRSI Trigger: GATGCTTCTGTCATTAGCCCAGTTTAGAGTTCTAAG...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR CCA 90 bp | GGACTTCTATGCAGTATTATTAACACTTTGCCATTTCAGAAAAGAGGTAGTGTTATCACTCACCTACTTTaGGGAAAATACTATGTAACA | + |
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Preference number: 2 (lower is better) Translates to: GLLCSIINTLPFQKRGSVITHLL*GKYYVT Trigger: TGTTACATAGTATTTTCCCCAAAGTAGGTGAGTGAT...AACACTACCTCTTTTCTGAAATGGCAAAGTGTTAATAATACTGCATAGAAGTCC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR CCA 72 bp | TGCGGCGTGCCTCACGCTTTCCCTCACGGTACCCTGTaGCTTGCTTTATTCGAACACAGCAATGCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: CGVPHAFPHGTL*LALFEHSNACF Trigger: GAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGTGAGGGAAAGCGTGAGGCACGCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTACACCACTACTTTATTaGACTTGTGTGGGGCGGGTT | + |
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Preference number: 3 (lower is better) Translates to: PESIGFPGTGDTKHPCDATPLLY*TCVGRV Trigger: AACCCGCCCCACACAAGTCAAATAAAGTAGTGGTGT...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTCGAACACAGCAATGCTaGCTTCTTCAGTGTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: PESIGFPGTGDTKHPCDARTQQC*LLQCSH Trigger: GTGAGAACACTGAAGAAGCAAGCATTGCTGTGTTCG...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR TCA 72 bp | TTGCTTCTTCAGTGTTCTCACTTGTTAAATCACTTCTaGGGCCTCTGGAGATGTTCATGCAGGAGGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LLLQCSHLLNHF*GLWRCSCRRPS Trigger: GGAAGGCCTCCTGCATGAACATCTCCAGAGGCCTCAGAAGTGATTTAACAAGTGAGAACACTGAAGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR GCA 72 bp | CGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATaGTTGCTTCTTCAGTGTTCTCACTTGTTAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: RYPVACFIRTQQ*LLLQCSHLLNH Trigger: GTGATTTAACAAGTGAGAACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR-3UTR CAA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTGATCACTCACCTACTTaGGGGAAAATACTATGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GTLWLALFEHSNACFFSVDHSPT*GKILCN Trigger: GTTACATAGTATTTTCCCCAAAGTAGGTGAGTGATC...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR CCA 72 bp | ACGGAAATCAAACAACTAAACCTTAGAACTCTAAACTaGGCTAATGACAGAAGCATCTCTGTGCCTTTAGCC | + |
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Preference number: 3 (lower is better) Translates to: TEIKQLNLRTLN*ANDRSISVPLA Trigger: GGCTAAAGGCACAGAGATGCTTCTGTCATTAGCCCAGTTTAGAGTTCTAAGGTTTAGTTGTTTGATTTCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGGCAAACTGCGCCCGCTaGAAGTCAGCCGCCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVANCAR*KSAASR Trigger: GCGGCTGGCGGCTGACTTCCAGCGGGCGCAGTTTGC...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCGTGGACTCTGCAAACTaGGCCCGCTGGAAGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFVDSAN*ARWKSA Trigger: GGCTGACTTCCAGCGGGCGCAGTTTGCAGAGTCCAC...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCCCTTTGCGTGGACTCTaGAAACTGCGCCCGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFPLRGL*KLRPLE Trigger: TTCCAGCGGGCGCAGTTTGCAGAGTCCACGCAAAGG...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | CACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTCAGGGACAAAGACTaGTTTATCCTGTCGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HGTLWLALFEHSNACFFSVRDKD*FILSPA Trigger: GGCGGGCGACAGGATAAAGCAGTCTTTGTCCCTGAC...ACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCGGTCTCATCACCTGCTaGAGCAGCATAGCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFGLITC*SSIAAS Trigger: AGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACC...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR CAA 72 bp | GTCTGCATCTATTACCACACCACTACTTTATTTGACTaGTGTGGGGCGGGTTGGAGGGGGAGTAGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VCIYYHTTTLFD*CGAGWRGSRCA Trigger: AGCACACCTACTCCCCCTCCAACCCGCCCCACACAAGTCAAATAAAGTAGTGGTGTGGTAATAGATGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCGATAGCCATTCTGCCTaGAAAAGGAGTCCACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFDSHSA*KRSPPK Trigger: CTTGGGTGGACTCCTTTTTCAGGCAGAATGGCTATC...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCCTGTGGGTTGAGAGCTaGAATAACAGGACTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFLWVES*NNRTAV Trigger: CACAGCAGTCCTGTTATTTCAGCTCTCAACCCACAG...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | GAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTGCACGCTCTGACAACCTTTaGGTGGACTCTGCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: ESIGFPGTGDTKHPCDAARSDNL*VDSANC Trigger: GCAGTTTGCAGAGTCCACGCAAAGGTTGTCAGAGCG...TGCAGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCCTCCTCTGTGACAGATaGTTTCCTGGACTTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFLLCDR*FPGLEN Trigger: GTTCTCAAGTCCAGGAAATCATCTGTCACAGAGGAG...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | GAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTGCAGAGTCCGCGGATACGTaGTTTATGGCGAGCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: ESIGFPGTGDTKHPCDAAESADT*FMASYK Trigger: TTTGTAGCTCGCCATAAAGCACGTATCCGCGGACTC...TGCAGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTCCAGAGCCCTCTGTTaGTTTCTTCCTGCGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVSRALC*FLPAFI Trigger: GATGAACGCAGGAAGAAAGCAACAGAGGGCTCTGGA...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTCCTCAGGGGCATCCTaGATGTGTTTCCTTAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVSSGAS*MCFLKQ Trigger: TTGCTTAAGGAAACACATTCAGGATGCCCCTGAGGA...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTATCACTTGTAATGGCTaGAGGCTCCTCCACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GTLWLALFEHSNACFFSVITCNG*RLLHCH Trigger: ATGGCAGTGGAGGAGCCTGCAGCCATTACAAGTGAT...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCCAGATGTTGAAGACATaGAGACTGAACGTACTACCT | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFQMLKT*RLNVLP Trigger: AGGTAGTACGTTCAGTCTTCATGTCTTCAACATCTG...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGACTGTCTTCAGCAAGTaGTTGGTAAGAGCAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVTVFSK*LVRAVC Trigger: ACAGACTGCTCTTACCAAGCACTTGCTGAAGACAGT...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTATCAAGGTCCAGATaGCCATTGATAATCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVLSRSR*PLIIRP Trigger: TGGCCGGATTATCAATGGCCATCTGGACCTTGATAA...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTAGAGCCTGTCGATGCTaGAAGAGGATTTGTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTLWLALFEHSNACFFSVRACRC*KRICLS Trigger: GGAAAGACAAATCCTCTTCCAGCATCGACAGGCTCT...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| 3UTR CAA 72 bp | ATAAAGTCTGCATCTATTACCACACCACTACTTTATTaGACTTGTGTGGGGCGGGTTGGAGGGGGAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: IKSASITTPLLY*TCVGRVGGGVG Trigger: ACCTACTCCCCCTCCAACCCGCCCCACACAAGTCAAATAAAGTAGTGGTGTGGTAATAGATGCAGACTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | CACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTCTACAAAGGCCTCAGTaGAAATCACTCCTCTGTTAT | + |
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Preference number: 4 (lower is better) Translates to: HGTLWLALFEHSNACFFSLQRPQ*KSLLCY Trigger: ATAACAGAGGAGTGATTTTCACTGAGGCCTTTGTAG...ACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAAGCTCCTCCACTGCCATaGGGAAATCTGAGGCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQAPPLP*GNLRLG Trigger: TCCTAGCCTCAGATTTCCTCATGGCAGTGGAGGAGC...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTAAGTACTCTGTGTCCTaGAGTAGATGTCAGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GTLWLALFEHSNACFFSVKYSVS*SRCQGQ Trigger: TTGTCCCTGACATCTACTCCAGGACACAGAGTACTT...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCAGTTATGGAGTTTTGTaGGAGCTACTTTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFSYGVL*ELLWFL Trigger: AAGAAACCAAAGTAGCTCTCACAAAACTCCATAACT...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | CACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTTTGGCCAACACAAGTTaGCTTCAAAAACAAGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HGTLWLALFEHSNACFFSLANTS*LQKQEL Trigger: CAACTCTTGTTTTTGAAGGCAACTTGTGTTGGCCAA...ACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR GCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTTATTCACAATCTCAATaGAGTTCCGCTCTGACAACC | + |
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Preference number: 4 (lower is better) Translates to: GTLWLALFEHSNACFFSVYSQSQ*SSALTT Trigger: GGTTGTCAGAGCGGAACTGCATTGAGATTGTGAATA...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGCTGGGATTCCAAGTCTaGATAAAGCGTCAAATTCTA | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVLGFQV*IKRQIL Trigger: TAGAATTTGACGCTTTATCCAGACTTGGAATCCCAG...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | GGACTTCTATGCAGTATTATTAACACTTTGCCATTTCAGAAAAGAGGTAGTGTTCACCTTCCAGGTGCGTaGAGCATGCTGTGGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GLLCSIINTLPFQKRGSVHLPGA*SMLWVE Trigger: CTCAACCCACAGCATGCTCCACGCACCTGGAAGGTG...AACACTACCTCTTTTCTGAAATGGCAAAGTGTTAATAATACTGCATAGAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGCTGAAATCCATATTTTaGAACCAAAGAGTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: TVPCGLLYSNTAMLASSVLKSIF*NQRVHW Trigger: CCAGTGAACTCTTTGGTTTCAAAATATGGATTTCAG...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTTCATTGAGAGAGTTATaGAGTTTTGTGAGAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: PESIGFPGTGDTKHPCDASLREL*SFVRAT Trigger: AGTAGCTCTCACAAAACTCCATAACTCTCTCAATGA...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTTCTAGCTGTTAAAAGCAAGAGCCAGAACTTAGGAATACAAAATATAAAACGCGATGATCTGTaGGACACACCTTCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AFLLAVKSKSQNLGIQNIKRDDL*DTPSRC Trigger: GCACCTGGAAGGTGTGTCCCACAGATCATCGCGTTT...TATATTTTGTATTCCTAAGTTCTGGCTCTTGCTTTTAACAGCTAGAAGGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR CCA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCATTTCTTTACTGATTTaGGCTGGAGTGATATATTCC | + |
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Preference number: 4 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFISLLI*AGVIYS Trigger: GGAATATATCACTCCAGCCCAAATCAGTAAAGAAAT...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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| CDS-3UTR TCA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTTCTGAGACAGTTACTTaGCCACTTTCTTGCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTLWLALFEHSNACFFSVSETVT*PLSCNL Trigger: TAAATTGCAAGAAAGTGGTCAAGTAACTGTCTCAGA...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAAGTATTCTGCAAGCTCTaGAATAAACTCCTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQVFCKL*NKLLRG Trigger: GCCCCTGAGGAGTTTATTTCAGAGCTTGCAGAATAC...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAAGATAATGACAGTTCCTaGAGCTCTTTCCGAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQDNDSS*SSFRVA Trigger: CGCTACTCGGAAAGAGCTTCAGGAACTGTCATTATC...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTGCAAGTACCATCTGCACGTaGTTCTCTGATTTAATAATA | + |
|
Preference number: 4 (lower is better) Translates to: ESIGFPGTGDTKHPCDAASTICT*FSDLII Trigger: TATTATTAAATCAGAGAAGCACGTGCAGATGGTACT...TGCAGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTAGTCTGTGTGTCATCTaGAAAATATTTCATTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PESIGFPGTGDTKHPCDASLCVI*KIFHSL Trigger: AAGGGAATGAAATATTTTGCAGATGACACACAGACT...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTTCTAGCTGTTAAAAGCAAGAGCCAGAACTTAGGAATACAAAATATACGGATACGTGCTTTATaGCGAGCTACAAAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLLAVKSKSQNLGIQNIRIRAL*RATKAS Trigger: TGAGGCCTTTGTAGCTCGCCATAAAGCACGTATCCG...TATATTTTGTATTCCTAAGTTCTGGCTCTTGCTTTTAACAGCTAGAAGGAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAACAACTGACAAGGAACTaGGTAGCAGAGGCGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQQLTRN*VAEAKC Trigger: ACATTTCGCCTCTGCTACCCAGTTCCTTGTCAGTTG...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| 3UTR CAA 72 bp | TACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTaGCTTCTTCAGTGTTCTCACTTGTTAAATCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPVACFIRTQQC*LLQCSHLLNHF Trigger: GAAGTGATTTAACAAGTGAGAACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTCTAGCTGTTAAAAGCAAGAGCCAGAACTTAGGAATACAAAATATAACCAAGAGAGTATGTTaGTCCTCTGGGATTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLLAVKSKSQNLGIQNITKRVC*SSGILL Trigger: CAGCAAAATCCCAGAGGATCAACATACTCTCTTGGT...TATATTTTGTATTCCTAAGTTCTGGCTCTTGCTTTTAACAGCTAGAAGGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAAACTCTACTCTCGATATaGGTCAGGTCCACATTAATA | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQTLLSI*VRSTLI Trigger: TATTAATGTGGACCTGACTCATATCGAGAGTAGAGT...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAACTGCACGTGCTTCTCTaGTTTAATAATATCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQLHVLL*FNNITD Trigger: GTCAGTGATATTATTAAATCAGAGAAGCACGTGCAG...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GGACTTCTATGCAGTATTATTAACACTTTGCCATTTCAGAAAAGAGGTAGTGTTGGCTTTACACAGTTCTaGGACAGTTACTTGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLLCSIINTLPFQKRGSVGFTQF*DSYLTT Trigger: AGTGGTCAAGTAACTGTCTCAGAACTGTGTAAAGCC...AACACTACCTCTTTTCTGAAATGGCAAAGTGTTAATAATACTGCATAGAAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR GCA 90 bp | GGACTTCTATGCAGTATTATTAACACTTTGCCATTTCAGAAAAGAGGTAGTGTTTGTCCCAGTACCATCTaGACGTGCTTCTCTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLCSIINTLPFQKRGSVCPSTI*TCFSDL Trigger: TAAATCAGAGAAGCACGTGCAGATGGTACTGGGACA...AACACTACCTCTTTTCTGAAATGGCAAAGTGTTAATAATACTGCATAGAAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CCA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAATTTACTGATTTGGGCTaGAGTGATATATTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DTKHPCDAANHHHQQQQQFTDLG*SDIFLA Trigger: GGCAAGGAATATATCACTCCAGCCCAAATCAGTAAA...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTCTAGCTGTTAAAAGCAAGAGCCAGAACTTAGGAATACAAAATATACCAGTCTTCTTATTTTaGCTGACTAACTGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AFLLAVKSKSQNLGIQNIPVFLF*LTNCFT Trigger: TGTGAAACAGTTAGTCAGTCAAAATAAGAAGACTGG...TATATTTTGTATTCCTAAGTTCTGGCTCTTGCTTTTAACAGCTAGAAGGAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | TATCCTGTCGCCCGCCGACCACGGTGCCTCGTAAGCGGCCAGTGCTaGCGAGGTCCTCGAGCACAGAGTAAAGGAGCTGTTCCTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: YPVARRPRCLVSGQC*RGPRAQSKGAVPEI Trigger: GATTTCAGGAACAGCTCCTTTACTCTGTGCTCGAGGACCTCGTCAGCACTGGCCGCTTACGAGGCACCGTGGTCGGCGGGCGACAGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | AGGAACTGGGTAGCAGAGGCGAAATGTCAACCCAGGTCCCTGAGCTaGTGGCTTCCTCTACGGATGCTTCCACCTGGTCTACGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNWVAEAKCQPRSLS*WLPLRMLPPGLRVL Trigger: AAGGACTCGTAGACCAGGTGGAAGCATCCGTAGAGGAAGCCATCAGCTCAGGGACCTGGGTTGACATTTCGCCTCTGCTACCCAGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | GGGACACACCTTCCAGGTGCGTGGAGCATGCTGTGGGTTGAGAGCTaGAATAACAGGACTGCTGTGAGGTGTAAAATCAGAGCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTHLPGAWSMLWVES*NNRTAVRCKIRAGS Trigger: AGACCCTGCTCTGATTTTACACCTCACAGCAGTCCTGTTATTTCAGCTCTCAACCCACAGCATGCTCCACGCACCTGGAAGGTGTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS CCA 90 bp | ACCCAGGTCCCTGAGCTGATGGCTTCCTCTACGGATGCTTCCACCTaGTCTACGAGTCCTTGGCCAACACAAGTTGCCTTCAAAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQVPELMASSTDAST*STSPWPTQVAFKNK Trigger: CTTGTTTTTGAAGGCAACTTGTGTTGGCCAAGGACTCGTAGACCAGGTGGAAGCATCCGTAGAGGAAGCCATCAGCTCAGGGACCTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | AGAGAGTATGTTGATCCTCTGGGATTTTGCTGTGAAGAAACGCGATaGTCTGTGGGACACACCTTCCAGGTGCGTGGAGCATGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: REYVDPLGFCCEETR*SVGHTFQVRGACCG Trigger: CCCACAGCATGCTCCACGCACCTGGAAGGTGTGTCCCACAGATCATCGCGTTTCTTCACAGCAAAATCCCAGAGGATCAACATACTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS GCA 90 bp | CACTGGTGTAGGCCGTGTAATGGCACTGAAGAGTCCGCGGATACGTaGTTTATGGCGAGCTACAAAGGCCTCAGTGAAAATCACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HWCRPCNGTEESADT*FMASYKGLSENHSS Trigger: AGAGGAGTGATTTTCACTGAGGCCTTTGTAGCTCGCCATAAAGCACGTATCCGCGGACTCTTCAGTGCCATTACACGGCCTACACCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS GCA 90 bp | GCTGTGAGGTGTAAAATCAGAGCAGGGTCTTCTGTGACCTTCAGCTaGTCACACAGAGCCTGTCGATGCTGGAAGAGGATTTGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVRCKIRAGSSVTFS*SHRACRCWKRICLS Trigger: GGAAAGACAAATCCTCTTCCAGCATCGACAGGCTCTGTGTGAGCAGCTGAAGGTCACAGAAGACCCTGCTCTGATTTTACACCTCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS CCA 90 bp | AAGACTATAGCTGAAGCGAGCTTGCCGAATGGTCTCATCACCTGCTaGAGCAGCATAGCAGCATCTTCAACTGACAAGGAACTGGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTIAEASLPNGLITC*SSIAASSTDKELGS Trigger: GCTACCCAGTTCCTTGTCAGTTGAAGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS GCA 90 bp | CTAAAGACTATAGCTGAAGCGAGCTTGCCGAATGGTCTCATCACCTaGTGGAGCAGCATAGCAGCATCTTCAACTGACAAGGAACTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKTIAEASLPNGLIT*WSSIAASSTDKELG Trigger: ACCCAGTTCCTTGTCAGTTGAAGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS CCA 90 bp | GTAGGCCGTGTAATGGCACTGAAGAGTCCGCGGATACGTGCTTTATaGCGAGCTACAAAGGCCTCAGTGAAAATCACTCCTCTGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: VGRVMALKSPRIRAL*RATKASVKITPLLS Trigger: TGATAACAGAGGAGTGATTTTCACTGAGGCCTTTGTAGCTCGCCATAAAGCACGTATCCGCGGACTCTTCAGTGCCATTACACGGCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCGGAGCATGCTGTGGGTaGAGAGCTGAAATAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFGACCG*RAEITG Trigger: TCCTGTTATTTCAGCTCTCAACCCACAGCATGCTCC...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTCCAGAGCCCTCTGTaGCTTTCTTCCTGCGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TVPCGLLYSNTAMLASSVFQSPL*LSSCVH Trigger: ATGAACGCAGGAAGAAAGCAACAGAGGGCTCTGGAA...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | TATGAACTTTTCACTCACCACAACCGTGTCACTAAAGACTATAGCTaGAGCGAGCTTGCCGAATGGTCTCATCACCTGCTGGAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YELFTHHNRVTKDYS*SELAEWSHHLLEQH Trigger: ATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTTTAGTGACACGGTTGTGGTGAGTGAAAAGTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | CACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTTTCCTTCTCAGCTTTTaGGTGCATCCGTTCGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HGTLWLALFEHSNACFFSFLLSF*VHPFAE Trigger: TTCAGCGAACGGATGCACCAAAAAGCTGAGAAGGAA...ACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS CCA 90 bp | CGACCACCTCGGACATGTAGCTCGTCTCTCATTTCTTTACTGATTTaGGCTGGAGTGATATATTCCTTGCCGTCAAGTGTATGGACTACT | + |
|
Preference number: 5 (lower is better) Translates to: RPPRTCSSSLISLLI*AGVIYSLPSSVWTT Trigger: AGTAGTCCATACACTTGACGGCAAGGAATATATCACTCCAGCCCAAATCAGTAAAGAAATGAGAGACGAGCTACATGTCCGAGGTGGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | ACAACAACAACAGCAGCACCCACTGAGCCACCTCTACAGCCCCTTAATGTTTTCTCTGAGGCTAGGAAGTaGAACATGAGGTTAGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: TTTTAAPTEPPLQPLNVFSEARK*NMRLVI Trigger: TATCACTAACCTCATGTTCAACTTCCTAGCCTCAGA...GAAAACATTAAGGGGCTGTAGAGGTGGCTCAGTGGGTGCTGCTGTTGTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | CCAGAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTATGCTGGAAGAGGATTaGTCTTTCCCTTTTCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PESIGFPGTGDTKHPCDAMLEED*SFPFLV Trigger: GACAAGAAAAGGGAAAGACAAATCCTCTTCCAGCAT...AGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | ACGGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGGATGATTTCCTGGACTaGAGAACAAGGTCCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: TVPCGLLYSNTAMLASSVDDFLD*RTRSLM Trigger: CATTAAGGACCTTGTTCTCAAGTCCAGGAAATCATC...CACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTTCTTCTTGTAAGTCCTaGATTGTGCGTTTTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLWLALFEHSNACFFSVSSCKS*IVRFLP Trigger: TGGCAGAAAACGCACAATCAAGGACTTACAAGAAGA...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | CATCGCTTGACGGATCCTCTCCCTGCCCAGTCTTCTTATTTTGACTaGCTAACTGTTTCACAACCAAACCTTGATATTTTACCAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLTDPLPAQSSYFD*LTVSQPNLDILPRE Trigger: CTCTCTTGGTAAAATATCAAGGTTTGGTTGTGAAACAGTTAGTCAGTCAAAATAAGAAGACTGGGCAGGGAGAGGATCCGTCAAGCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GATACAAAGCATCCATGTGATGCTGCAAATCATCACCATCAACAACAACAACAAGTCTTCAGCAAGTGCTaGGTAAGAGCAGTCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DTKHPCDAANHHHQQQQQVFSKC*VRAVCV Trigger: CACACAGACTGCTCTTACCAAGCACTTGCTGAAGAC...TTGTTGTTGTTGTTGATGGTGATGATTTGCAGCATCACATGGATGCTTTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATTGGCTTTCCTGGGACTGGAGATACAAAGCATCCATGTGATGCTGCACATTTCTTTACTGATTaGGGCTGGAGTGATATATTC | + |
|
Preference number: 5 (lower is better) Translates to: ESIGFPGTGDTKHPCDAAHFFTD*GWSDIF Trigger: GAATATATCACTCCAGCCCAAATCAGTAAAGAAATG...TGCAGCATCACATGGATGCTTTGTATCTCCAGTCCCAGGAAAGCCAATGCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | GTTCTCATCAATCAGTTGTCCCAGTACCATCTGCACGTGCTTCTCTaGTTTAATAATATCACTGACTCTACTCTCGATATGAGTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLINQLSQYHLHVLL*FNNITDSTLDMSQV Trigger: GACCTGACTCATATCGAGAGTAGAGTCAGTGATATTATTAAATCAGAGAAGCACGTGCAGATGGTACTGGGACAACTGATTGATGAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | CTGTGTCAGAAAATCCCCAGGAAGGTCATAGGCTTTACACAGTTCTaGGACAGTTACTTGACCACTTTCTTGCAATTTATCATTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCQKIPRKVIGFTQF*DSYLTTFLQFIIHL Trigger: GAGGTGAATGATAAATTGCAAGAAAGTGGTCAAGTAACTGTCTCAGAACTGTGTAAAGCCTATGACCTTCCTGGGGATTTTCTGACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GGTACCCTGTGGCTTGCTTTATTCGAACACAGCAATGCTTGCTTCTTCAGTGTTTACTTGACCACTTTCTaGCAATTTATCATTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLWLALFEHSNACFFSVYLTTF*QFIIHL Trigger: GAGGTGAATGATAAATTGCAAGAAAGTGGTCAAGTA...AACACTGAAGAAGCAAGCATTGCTGTGTTCGAATAAAGCAAGCCACAGGGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | ATTAAGTATTCTGCAAGCTCTGAAATAAACTCCTCAGGGGCATCCTaGATGTGTTTCCTTAAGCAATCTTCAATTTCATCCTGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: IKYSASSEINSSGAS*MCFLKQSSISSWNM Trigger: CATGTTCCAGGATGAAATTGAAGATTGCTTAAGGAAACACATTCAGGATGCCCCTGAGGAGTTTATTTCAGAGCTTGCAGAATACTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GGACTTCTATGCAGTATTATTAACACTTTGCCATTTCAGAAAAGAGGTAGTGTTTACCAAGAGAGTATGTaGATCCTCTGGGATTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLLCSIINTLPFQKRGSVYQESM*ILWDFA Trigger: AGCAAAATCCCAGAGGATCAACATACTCTCTTGGTA...AACACTACCTCTTTTCTGAAATGGCAAAGTGTTAATAATACTGCATAGAAGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS-3UTR CAA 90 bp | GCCTTCCTTCTAGCTGTTAAAAGCAAGAGCCAGAACTTAGGAATACAAAATATATTTGTGAGAGCTACTTaGGTTTCTTCTGTCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFLLAVKSKSQNLGIQNIFVRAT*VSSVNL Trigger: CAAATTGACAGAAGAAACCAAAGTAGCTCTCACAAA...TATATTTTGTATTCCTAAGTTCTGGCTCTTGCTTTTAACAGCTAGAAGGAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 90 bp | ACGTGCTTCTCTGATTTAATAATATCACTGACTCTACTCTCGATATaGGTCAGGTCCACATTAATAACCTGTTGTAAGTCAACAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCFSDLIISLTLLSI*VRSTLITCCKSTMF Trigger: AAACATTGTTGACTTACAACAGGTTATTAATGTGGACCTGACTCATATCGAGAGTAGAGTCAGTGATATTATTAAATCAGAGAAGCACGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS CCA 72 bp | GACAACCTTTGCGTGGACTCTGCAAACTGCGCCCGCTaGAAGTCAGCCGCCAGCCGCCGGATCTCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DNLCVDSANCAR*KSAASRRISSQ Trigger: CTGGGAGGAGATCCGGCGGCTGGCGGCTGACTTCCAGCGGGCGCAGTTTGCAGAGTCCACGCAAAGGTTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
||
| CDS TCA 72 bp | GCCCGCCGACCACGGTGCCTCGTAAGCGGCCAGTGCTaGCGAGGTCCTCGAGCACAGAGTAAAGGAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARRPRCLVSGQC*RGPRAQSKGAV Trigger: AACAGCTCCTTTACTCTGTGCTCGAGGACCTCGTCAGCACTGGCCGCTTACGAGGCACCGTGGTCGGCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | CCTGAGCTGATGGCTTCCTCTACGGATGCTTCCACCTaGTCTACGAGTCCTTGGCCAACACAAGTTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PELMASSTDAST*STSPWPTQVAF Trigger: GAAGGCAACTTGTGTTGGCCAAGGACTCGTAGACCAGGTGGAAGCATCCGTAGAGGAAGCCATCAGCTCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | CTCTGGGATTTTGCTGTGAAGAAACGCGATGATCTGTaGGACACACCTTCCAGGTGCGTGGAGCATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LWDFAVKKRDDL*DTPSRCVEHAV Trigger: CACAGCATGCTCCACGCACCTGGAAGGTGTGTCCCACAGATCATCGCGTTTCTTCACAGCAAAATCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | GTTGATCCTCTGGGATTTTGCTGTGAAGAAACGCGATaGTCTGTGGGACACACCTTCCAGGTGCGTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VDPLGFCCEETR*SVGHTFQVRGA Trigger: TGCTCCACGCACCTGGAAGGTGTGTCCCACAGATCATCGCGTTTCTTCACAGCAAAATCCCAGAGGATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | GCTGAAGCGAGCTTGCCGAATGGTCTCATCACCTGCTaGAGCAGCATAGCAGCATCTTCAACTGACAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: AEASLPNGLITC*SSIAASSTDKE Trigger: TTCCTTGTCAGTTGAAGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 90 bp | TCACTCACCACAACCGTGTCACTAAAGACTATAGCTGAAGCGAGCTaGCCGAATGGTCTCATCACCTGCTGGAGCAGCATAGCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SLTTTVSLKTIAEAS*PNGLITCWSSIAAS Trigger: AGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTTTAGTGACACGGTTGTGGTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS GCA 72 bp | AGGCCGTGTAATGGCACTGAAGAGTCCGCGGATACGTaGTTTATGGCGAGCTACAAAGGCCTCAGTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RPCNGTEESADT*FMASYKGLSEN Trigger: ATTTTCACTGAGGCCTTTGTAGCTCGCCATAAAGCACGTATCCGCGGACTCTTCAGTGCCATTACACGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS GCA 72 bp | ATAGCTGAAGCGAGCTTGCCGAATGGTCTCATCACCTaGTGGAGCAGCATAGCAGCATCTTCAACTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: IAEASLPNGLIT*WSSIAASSTDK Trigger: CTTGTCAGTTGAAGATGCTGCTATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 90 bp | GCTGCAGGCTCCTCCACTGCCATGAGGAAATCTGAGGCTAGGAAGTaGAACATGAGGTTAGTGATATCGGTACACACTGTCTTCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AAGSSTAMRKSEARK*NMRLVISVHTVFSK Trigger: CTTGCTGAAGACAGTGTGTACCGATATCACTAACCTCATGTTCAACTTCCTAGCCTCAGATTTCCTCATGGCAGTGGAGGAGCCTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | TTCACTCACCACAACCGTGTCACTAAAGACTATAGCTaGAGCGAGCTTGCCGAATGGTCTCATCACCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FTHHNRVTKDYS*SELAEWSHHLL Trigger: CAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTTTAGTGACACGGTTGTGGTGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS GCA 72 bp | TGTAAAATCAGAGCAGGGTCTTCTGTGACCTTCAGCTaGTCACACAGAGCCTGTCGATGCTGGAAGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: CKIRAGSSVTFS*SHRACRCWKRI Trigger: AATCCTCTTCCAGCATCGACAGGCTCTGTGTGAGCAGCTGAAGGTCACAGAAGACCCTGCTCTGATTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | GTAATGGCACTGAAGAGTCCGCGGATACGTGCTTTATaGCGAGCTACAAAGGCCTCAGTGAAAATCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: VMALKSPRIRAL*RATKASVKITP Trigger: AGGAGTGATTTTCACTGAGGCCTTTGTAGCTCGCCATAAAGCACGTATCCGCGGACTCTTCAGTGCCATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | TCCTCTACGGATGCTTCCACCTGGTCTACGAGTCCTTaGCCAACACAAGTTGCCTTCAAAAACAAGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSTDASTWSTSP*PTQVAFKNKSW Trigger: CCAACTCTTGTTTTTGAAGGCAACTTGTGTTGGCCAAGGACTCGTAGACCAGGTGGAAGCATCCGTAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 72 bp | ACAACCGTGTCACTAAAGACTATAGCTGAAGCGAGCTaGCCGAATGGTCTCATCACCTGCTGGAGCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: TTVSLKTIAEAS*PNGLITCWSSI Trigger: TATGCTGCTCCAGCAGGTGATGAGACCATTCGGCAAGCTCGCTTCAGCTATAGTCTTTAGTGACACGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 72 bp | TTCCTCTACGGATGCTTCCACCTGGTCTACGAGTCCTaGGCCAACACAAGTTGCCTTCAAAAACAAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FLYGCFHLVYES*ANTSCLQKQEL Trigger: CAACTCTTGTTTTTGAAGGCAACTTGTGTTGGCCAAGGACTCGTAGACCAGGTGGAAGCATCCGTAGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 72 bp | TCCTCCACTGCCATGAGGAAATCTGAGGCTAGGAAGTaGAACATGAGGTTAGTGATATCGGTACACACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSTAMRKSEARK*NMRLVISVHTV Trigger: GACAGTGTGTACCGATATCACTAACCTCATGTTCAACTTCCTAGCCTCAGATTTCCTCATGGCAGTGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | TGGATAAAGCGTCAAATTCTAGATAGCCATTCTGCCTaGAAAAGGAGTCCACCCAAGTACTCTGTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WIKRQILDSHSA*KRSPPKYSVSW Trigger: CCAGGACACAGAGTACTTGGGTGGACTCCTTTTTCAGGCAGAATGGCTATCTAGAATTTGACGCTTTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 90 bp | AACATGAGGTTAGTGATATCGGTACACACTGTCTTCAGCAAGTGCTaGGTAAGAGCAGTCTGTGTGTCATCTGCAAAATATTTCATTCCC | + |
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Preference number: 6 (lower is better) Translates to: NMRLVISVHTVFSKC*VRAVCVSSAKYFIP Trigger: GGGAATGAAATATTTTGCAGATGACACACAGACTGCTCTTACCAAGCACTTGCTGAAGACAGTGTGTACCGATATCACTAACCTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | ACCTTGATATTTTACCAAGAGAGTATGTTGATCCTCTaGGATTTTGCTGTGAAGAAACGCGATGATCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TLIFYQESMLIL*DFAVKKRDDLW Trigger: CCACAGATCATCGCGTTTCTTCACAGCAAAATCCCAGAGGATCAACATACTCTCTTGGTAAAATATCAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 72 bp | TTAGTGATATCGGTACACACTGTCTTCAGCAAGTGCTaGGTAAGAGCAGTCTGTGTGTCATCTGCAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: LVISVHTVFSKC*VRAVCVSSAKY Trigger: ATATTTTGCAGATGACACACAGACTGCTCTTACCAAGCACTTGCTGAAGACAGTGTGTACCGATATCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | AATCAGTTGTCCCAGTACCATCTGCACGTGCTTCTCTaGTTTAATAATATCACTGACTCTACTCTCGATATG | + |
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Preference number: 6 (lower is better) Translates to: NQLSQYHLHVLL*FNNITDSTLDM Trigger: CATATCGAGAGTAGAGTCAGTGATATTATTAAATCAGAGAAGCACGTGCAGATGGTACTGGGACAACTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | AAAATCCCCAGGAAGGTCATAGGCTTTACACAGTTCTaGGACAGTTACTTGACCACTTTCTTGCAATTTATC | + |
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Preference number: 6 (lower is better) Translates to: KIPRKVIGFTQF*DSYLTTFLQFI Trigger: GATAAATTGCAAGAAAGTGGTCAAGTAACTGTCTCAGAACTGTGTAAAGCCTATGACCTTCCTGGGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | TATTGTATAGGTTTGAAACCTCTTCTTGTAAGTCCTTaGTTGTGCGTTTTCTGCCAGTTCCAGAAGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: YCIGLKPLLVSP*LCVFCQFQKQM Trigger: CATCTGCTTCTGGAACTGGCAGAAAACGCACAATCAAGGACTTACAAGAAGAGGTTTCAAACCTATACAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | ACGGATCCTCTCCCTGCCCAGTCTTCTTATTTTGACTaGCTAACTGTTTCACAACCAAACCTTGATATTTTA | + |
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Preference number: 6 (lower is better) Translates to: TDPLPAQSSYFD*LTVSQPNLDIL Trigger: TAAAATATCAAGGTTTGGTTGTGAAACAGTTAGTCAGTCAAAATAAGAAGACTGGGCAGGGAGAGGATCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS GCA 72 bp | TTCTCATCAATCAGTTGTCCCAGTACCATCTGCACGTaGTTCTCTGATTTAATAATATCACTGACTCTACTC | + |
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Preference number: 6 (lower is better) Translates to: FSSISCPSTICT*FSDLIISLTLL Trigger: GAGTAGAGTCAGTGATATTATTAAATCAGAGAAGCACGTGCAGATGGTACTGGGACAACTGATTGATGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CCA 72 bp | TCTTTATATAGTTCACAGCATCTGGGATTCCAAGTCTaGATAAAGCGTCAAATTCTAGATAGCCATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SLYSSQHLGFQV*IKRQILDSHSA Trigger: GGCAGAATGGCTATCTAGAATTTGACGCTTTATCCAGACTTGGAATCCCAGATGCTGTGAACTATATAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 72 bp | TTATTGTATAGGTTTGAAACCTCTTCTTGTAAGTCCTaGATTGTGCGTTTTCTGCCAGTTCCAGAAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LLYRFETSSCKS*IVRFLPVPEAD Trigger: ATCTGCTTCTGGAACTGGCAGAAAACGCACAATCAAGGACTTACAAGAAGAGGTTTCAAACCTATACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS CAA 90 bp | AATCTGATATTATTGTATAGGTTTGAAACCTCTTCTTGTAAGTCCTaGATTGTGCGTTTTCTGCCAGTTCCAGAAGCAGATGTTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: NLILLYRFETSSCKS*IVRFLPVPEADVED Trigger: GTCTTCAACATCTGCTTCTGGAACTGGCAGAAAACGCACAATCAAGGACTTACAAGAAGAGGTTTCAAACCTATACAATAATATCAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038705.8 ENSMUST00000102994.10 |
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| CDS TCA 72 bp | TCTGATTTAATAATATCACTGACTCTACTCTCGATATaGGTCAGGTCCACATTAATAACCTGTTGTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SDLIISLTLLSI*VRSTLITCCKS Trigger: TGACTTACAACAGGTTATTAATGTGGACCTGACTCATATCGAGAGTAGAGTCAGTGATATTATTAAATCAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102994.10 |
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