Pregenerated sensors for UFC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062963Ensembl transcript IDs: ENSMUST00000080001.9, ENSMUST00000111302.4, ENSMUST00000144576.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAAGTTACACCCCAGGCCTCCAAAATGCCTCCAGGGCTCTACTTaGAGAAGGGATACAAACCGCCTATTTCAAGGCCCAAATCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: CKLHPRPPKCLQGST*RRDTNRLFQGPNLS Trigger: TGAAAGATTTGGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTGTAACTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGAAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGTGGATCACACCCTTCTaGATCAGATCGGGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ILKKEQTGMEPSHGPSVRWITPF*IRSGTS Trigger: GGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCCA...CCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTTCAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGAAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGGCCAGAGGTGACCCTTaGAGGAATCCTGAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ILKKEQTGMEPSHGPSVRARGDP*RNPEKG Trigger: TCCTTTTTCAGGATTCCTTCAAGGGTCACCTCTGGC...CCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTTCAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGCCTCAGCTGCATTTTTCTTTGTaGTGGATCACACCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KKEQTGMEPSHGPSVRPQLHFSL*WITPFW Trigger: CCAGAAGGGTGTGATCCAGCACAAAGAAAAATGCAG...CTGAGGCCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGAGGTGACCCTCCCAGGGCCATGAGATaGGCTAGTCCAAACTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGFLICPSSYFVTARGDPPRAMR*ASPNLG Trigger: GCCTAAGTTTGGACTAGCTCATCTCATGGCCCTGGG...AGGGTCACCTCTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGGTTGTCTCCAGAAACCAAAAAGCTATGTGCTGTAAGTTACACCCCAGGCCTCCAGGGCTCTACTTaGAGAAGGGATACAAACCGC | + |
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Preference number: 2 (lower is better) Translates to: DRLSPETKKLCAVSYTPGLQGST*RRDTNR Trigger: GCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAG...GCCTGGGGTGTAACTTACAGCACATAGCTTTTTGGTTTCTGGAGACAACCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCATTTTTCTTTGTGCTGGATCACACCCTTCTGGATCAGATCGGGGACTTCCCCCTTGAAGGAATCCTaGAAAAGGAGCAAACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LHFSLCWITPFWIRSGTSPLKES*KRSKQE Trigger: TTCCTGTTTGCTCCTTTTTCAGGATTCCTTCAAGGG...GGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCCAGCACAAAGAAAAATGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTATTTCAAGGCCCAAACATTTAGAAACTTTGTaGCCTTGCCCTATTGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PPGLYLEKGYKPPISRPKHLETL*PCPIVG Trigger: CCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATG...TTTGGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTATTTCAAGGCCCAACCTTGCCCTATTGTTaGGTTTTCTTATTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CLQGSTWRRDTNRLFQGPTLPYC*VFLFVP Trigger: AGGGACAAATAAGAAAACCCAACAATAGGGCAAGGT...TGGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR GCA 90 bp | AACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTGTCCAGCTCAGGGACTaGAATTTCCGGAGCAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: NFVTLPYCWVFLFVPPATVQLRD*NFRSSS Trigger: ACTACTGCTCCGGAAATTGCAGTCCCTGAGCTGGAC...AGTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGAAACCAAAAAGCTATGTGCTGTAAGTTACACCCCAGGCCTCCAAAACCCTTGAAGGAATCCTaGAAAAGGAGCAAACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VSRNQKAMCCKLHPRPPKPLKES*KRSKQE Trigger: TTCCTGTTTGCTCCTTTTTCAGGATTCCTTCAAGGG...TTTTGGAGGCCTGGGGTGTAACTTACAGCACATAGCTTTTTGGTTTCTGGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR TCA 90 bp | AATCTTTCATCTCTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATGCCAGAGGTGACCCTTaGAGGAATCCTGAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLSSLCTVSFRNFVTLPYARGDP*RNPEKG Trigger: TCCTTTTTCAGGATTCCTTCAAGGGTCACCTCTGGC...ATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAGAGATGAAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000144576.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAACCTTGCCCTATTGTTaGGTTTTCTTATTTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FRNFVTLPYCWVFLFVPPTLPYC*VFLFVP Trigger: AGGGACAAATAAGAAAACCCAACAATAGGGCAAGGT...TGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| 3UTR CAA 90 bp | AATCTTTCATCTCTCTGTACAGTTTCATTTAGAAACTTTGTGACCTaGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: NLSSLCTVSFRNFVT*PYCWVFLFVPPATL Trigger: CAAAGTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAGAGATGAAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000144576.8 |
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| 3UTR CCA 72 bp | CACCCCAGGCCTCCAAAATGCCTCCAGGGCTCTACTTaGAGAAGGGATACAAACCGCCTATTTCAAGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: HPRPPKCLQGST*RRDTNRLFQGP Trigger: TGGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR GCA 72 bp | GCTATGTGCTGTAAGTTACACCCCAGGCCTCCAAAATaGCTCCAGGGCTCTACTTGGAGAAGGGATACAAAC | + |
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Preference number: 3 (lower is better) Translates to: AMCCKLHPRPPK*LQGSTWRRDTN Trigger: GTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTGTAACTTACAGCACATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR CAA 90 bp | ATCCTGAAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGAGAAACTTTGTGACCTaGCCCTATTGTTGGGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: ILKKEQTGMEPSHGPSVRRNFVT*PYCWVF Trigger: GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCT...CCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTTCAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGGTTGTCTCCAGAAACCAAAAAGCTATGTGCTGTAAGTTACACCCCAGGCAGAAACTTTGTGACCTaGCCCTATTGTTGGGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: DRLSPETKKLCAVSYTPGRNFVT*PYCWVF Trigger: GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCT...GCCTGGGGTGTAACTTACAGCACATAGCTTTTTGGTTTCTGGAGACAACCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGAGGTGACCCTTCAGTCAGACATATTTaGCCACCCCTGTACATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LGFLICPSSYFVTARGDPSVRHI*PPLYIF Trigger: AAAGATGTACAGGGGTGGCAAAATATGTCTGACTGA...AGGGTCACCTCTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGCCTCAGGGGCCCCAGGGCCATGAGATaGGCTAGTCCAAACTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSKQEWSLATVPQSGLRGPRAMR*ASPNLG Trigger: GCCTAAGTTTGGACTAGCTCATCTCATGGCCCTGGG...GCCCCTGAGGCCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGCCTCAGGGGCCAGTCAGACATATTTTaGCACCCCTGTACATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RSKQEWSLATVPQSGLRGQSDIF*HPCTSL Trigger: CAAAGATGTACAGGGGTGGCAAAATATGTCTGACTG...GCCCCTGAGGCCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| 3UTR CAA 72 bp | ACACCCCAGGCCTCCAAAATGCCTCCAGGGCTCTACTaGGAGAAGGGATACAAACCGCCTATTTCAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TPQASKMPPGLY*EKGYKPPISRP Trigger: GGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR GCA 90 bp | ATCCTGAAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGGTCCAGCTCAGGGACTaGAATTTCCGGAGCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ILKKEQTGMEPSHGPSVRVQLRD*NFRSSS Trigger: ACTACTGCTCCGGAAATTGCAGTCCCTGAGCTGGAC...CCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTTCAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR TCA 90 bp | AATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTATTTCAAGGCCCCCAGGGCCATGAGATaGGCTAGTCCAAACTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: NASRALLGEGIQTAYFKAPRAMR*ASPNLG Trigger: GCCTAAGTTTGGACTAGCTCATCTCATGGCCCTGGG...GGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR GCA 90 bp | AGGCCTCCAAAATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTAGTCCAGCTCAGGGACTaGAATTTCCGGAGCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RPPKCLQGSTWRRDTNRLVQLRD*NFRSSS Trigger: ACTACTGCTCCGGAAATTGCAGTCCCTGAGCTGGAC...TAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | AGGCCTCCAAAATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTAGGGTCCCTTCCTTGTTaGACTCCAGTCGGAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: RPPKCLQGSTWRRDTNRLGSLPC*TPVGTN Trigger: ATTGGTTCCGACTGGAGTCCAACAAGGAAGGGACCC...TAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | AGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGCCTCAGGGGCTATTTGAGGAAATCGTaGATGTACCAGCATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSKQEWSLATVPQSGLRGYLRKS*MYQHFP Trigger: TGGAAAATGCTGGTACATCCACGATTTCCTCAAATA...GCCCCTGAGGCCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| 3UTR CAA 72 bp | CTCAGGGGCGTAGTCCTTCATTGGCTGCATTTTTCTTaGTGCTGGATCACACCCTTCTGGATCAGATCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRGVVLHWLHFS*CWITPFWIRSG Trigger: CCCCGATCTGATCCAGAAGGGTGTGATCCAGCACAAAGAAAAATGCAGCCAATGAAGGACTACGCCCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACCTCGGGGTCCGGCGTTaGTCTTCAGCACCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: KLCDLALLLGFLICPSSYLGVRR*SSAPGS Trigger: AGATCCCGGTGCTGAAGACCAACGCCGGACCCCGAG...GTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CCA 90 bp | ATACAAACCGCCTATTTCAAGGCCCAAATCTTTCATCTCTCTGTACAGTTTCATCTCGGGGTCCGGCGTTaGTCTTCAGCACCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: IQTAYFKAQIFHLSVQFHLGVRR*SSAPGS Trigger: AGATCCCGGTGCTGAAGACCAACGCCGGACCCCGAG...ATGAAACTGTACAGAGAGATGAAAGATTTGGGCCTTGAAATAGGCGGTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | AGGCCTCCAAAATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTACATTTTTCTTTGTGCTaGATCACACCCTTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: RPPKCLQGSTWRRDTNRLHFSLC*ITPFWI Trigger: GATCCAGAAGGGTGTGATCCAGCACAAAGAAAAATG...TAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR GCA 90 bp | CCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTATTTCAAGGCCCAAACAGTCAGACATATTTTaGCACCCCTGTACATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPGLYLEKGYKPPISRPKQSDIF*HPCTSL Trigger: CAAAGATGTACAGGGGTGGCAAAATATGTCTGACTG...TTTGGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | AATCTTTCATCTCTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATCTCGGGGTCCGGCGTTaGTCTTCAGCACCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: NLSSLCTVSFRNFVTLPYLGVRR*SSAPGS Trigger: AGATCCCGGTGCTGAAGACCAACGCCGGACCCCGAG...ATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAGAGATGAAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000144576.8 |
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| CDS-3UTR CCA 90 bp | AGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTGGGTCCCTTCCTTGTTaGACTCCAGTCGGAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: RNFVTLPYCWVFLFVPPAGSLPC*TPVGTN Trigger: ATTGGTTCCGACTGGAGTCCAACAAGGAAGGGACCC...AGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGTTACACCCCAGGCCTCCAAAATGCCTCCAGGGCTCTACTTGGAGAAGGTATTTGAGGAAATCGTaGATGTACCAGCATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CKLHPRPPKCLQGSTWRRYLRKS*MYQHFP Trigger: TGGAAAATGCTGGTACATCCACGATTTCCTCAAATA...CCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTGTAACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | TACAAACCGCCTATTTCAAGGCCCAAATCTTTCATCTCTCTGTACAGTTTCATTTGGATCACACCCTTCTaGATCAGATCGGGGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: YKPPISRPKSFISLYSFIWITPF*IRSGTS Trigger: GGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCCA...AATGAAACTGTACAGAGAGATGAAAGATTTGGGCCTTGAAATAGGCGGTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CCA 90 bp | CTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTGGATCACACCCTTCTaGATCAGATCGGGGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: LCTVSFRNFVTLPYCWVFWITPF*IRSGTS Trigger: GGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCCA...GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR CCA 90 bp | CATTTTTCTTTGTGCTGGATCACACCCTTCTGGATCAGATCGGGGACTTCCACTTATTTGAGGAAATCGTaGATGTACCAGCATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HFSLCWITPFWIRSGTSTYLRKS*MYQHFP Trigger: TGGAAAATGCTGGTACATCCACGATTTCCTCAAATA...AGTGGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCCAGCACAAAGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144576.8 |
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| CDS-3UTR CCA 90 bp | GCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGACATTTTTCTTTGTGCTaGATCACACCCTTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ALLLGFLICPSSYFVTARHFSLC*ITPFWI Trigger: GATCCAGAAGGGTGTGATCCAGCACAAAGAAAAATG...TCTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR GCA 90 bp | CTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCCTGCATTTTTCTTTGTaGTGGATCACACCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCTVSFRNFVTLPYCWVFLHFSL*WITPFW Trigger: CCAGAAGGGTGTGATCCAGCACAAAGAAAAATGCAG...GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| 3UTR CAA 72 bp | TCTCTCTGTACAGTTTCATTTAGAAACTTTGTGACCTaGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLCTVSFRNFVT*PYCWVFLFVPP Trigger: TGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | AAAAAGGAGCAAACAGGAATGGAGCCTAGCCACGGTCCCTCAGTCCGGCCTCAGTGGCTGCATTTTTCTTaGTGCTGGATCACACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KKEQTGMEPSHGPSVRPQWLHFS*CWITPF Trigger: GAAGGGTGTGATCCAGCACAAAGAAAAATGCAGCCA...CTGAGGCCGGACTGAGGGACCGTGGCTAGGCTCCATTCCTGTTTGCTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR CAA 90 bp | AAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTCTCGGGGTCCGGCGTaGGTCTTCAGCACCGGGATC | + |
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Preference number: 5 (lower is better) Translates to: KLCDLALLLGFLICPSSYSRGPA*VFSTGI Trigger: GATCCCGGTGCTGAAGACCAACGCCGGACCCCGAGA...GTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | GCAGCTTTTATTGACAGGTTGTCTCCAGAAACCAAAAAGCTATGTGCTGTAAGTTCTCGGGGTCCGGCGTaGGTCTTCAGCACCGGGATC | + |
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Preference number: 5 (lower is better) Translates to: AAFIDRLSPETKKLCAVSSRGPA*VFSTGI Trigger: GATCCCGGTGCTGAAGACCAACGCCGGACCCCGAGA...ACTTACAGCACATAGCTTTTTGGTTTCTGGAGACAACCTGTCAATAAAAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CAA 90 bp | TTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGAGGTGACCCTCGGGTCCCTTCCTTGTaGGACTCCAGTCGGAACCAA | + |
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Preference number: 5 (lower is better) Translates to: LGFLICPSSYFVTARGDPRVPSL*DSSRNQ Trigger: TTGGTTCCGACTGGAGTCCAACAAGGAAGGGACCCG...AGGGTCACCTCTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | CACCCCAGGCCTCCAAAATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACATGTCGAACTCATATTaGAGGAAATCGTGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: HPRPPKCLQGSTWRRDTNMSNSY*RKSWMY Trigger: GTACATCCACGATTTCCTCAAATATGAGTTCGACAT...GTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCATTTTGGAGGCCTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CAA 90 bp | ATGCCTCCAGGGCTCTACTTGGAGAAGGGATACAAACCGCCTATTTCAAGGCCCTCAGTCAGACATATTTaGCCACCCCTGTACATCTTT | + |
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Preference number: 5 (lower is better) Translates to: MPPGLYLEKGYKPPISRPSVRHI*PPLYIF Trigger: AAAGATGTACAGGGGTGGCAAAATATGTCTGACTGA...GGGCCTTGAAATAGGCGGTTTGTATCCCTTCTCCAAGTAGAGCCCTGGAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CAA 90 bp | AATCTTTCATCTCTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATTCTCGGGGTCCGGCGTaGGTCTTCAGCACCGGGATC | + |
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Preference number: 5 (lower is better) Translates to: NLSSLCTVSFRNFVTLPYSRGPA*VFSTGI Trigger: GATCCCGGTGCTGAAGACCAACGCCGGACCCCGAGA...ATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAGAGATGAAAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTATTGACAGGTTGTCTCCAGAAACCAAAAAGCTATGTGCTGTAAGTTACCGGGTCCCTTCCTTGTaGGACTCCAGTCGGAACCAA | + |
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Preference number: 5 (lower is better) Translates to: AFIDRLSPETKKLCAVSYRVPSL*DSSRNQ Trigger: TTGGTTCCGACTGGAGTCCAACAAGGAAGGGACCCG...GTAACTTACAGCACATAGCTTTTTGGTTTCTGGAGACAACCTGTCAATAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080001.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCCGGGTCCCTTCCTTGTaGGACTCCAGTCGGAACCAA | + |
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Preference number: 5 (lower is better) Translates to: LCTVSFRNFVTLPYCWVFRVPSL*DSSRNQ Trigger: TTGGTTCCGACTGGAGTCCAACAAGGAAGGGACCCG...GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGTGGCTGCATTTTTCTTaGTGCTGGATCACACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CPIVGFSYLSLQLLCNSQWLHFS*CWITPF Trigger: GAAGGGTGTGATCCAGCACAAAGAAAAATGCAGCCA...CTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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| CDS-3UTR CAA 90 bp | TTGGGTTTTCTTATTTGTCCCTCCAGCTACTTTGTAACAGCCAGAGGTGACCCTATGTCGAACTCATATTaGAGGAAATCGTGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: LGFLICPSSYFVTARGDPMSNSY*RKSWMY Trigger: GTACATCCACGATTTCCTCAAATATGAGTTCGACAT...AGGGTCACCTCTGGCTGTTACAAAGTAGCTGGAGGGACAAATAAGAAAACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | AAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACAGTCGGAACCAATCATaGTCCGAATTCTTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: KLCDLALLLGFLICPSSYSRNQS*SEFLLF Trigger: GAACAACAAGAATTCGGACAATGATTGGTTCCGACT...GTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTAGTCGGAACCAATCATaGTCCGAATTCTTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RNFVTLPYCWVFLFVPPASRNQS*SEFLLF Trigger: GAACAACAAGAATTCGGACAATGATTGGTTCCGACT...AGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | AACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTTATTTGTCCCTCCAGCTACTATGTCGAACTCATATTaGAGGAAATCGTGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: NFVTLPYCWVFLFVPPATMSNSY*RKSWMY Trigger: GTACATCCACGATTTCCTCAAATATGAGTTCGACAT...AGTAGCTGGAGGGACAAATAAGAAAACCCAACAATAGGGCAAGGTCACAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 ENSMUST00000144576.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTACAGTTTCATTTAGAAACTTTGTGACCTTGCCCTATTGTTGGGTTTTCTCAGTCAGACATATTTaGCCACCCCTGTACATCTTT | + |
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Preference number: 5 (lower is better) Translates to: LCTVSFRNFVTLPYCWVFSVRHI*PPLYIF Trigger: AAAGATGTACAGGGGTGGCAAAATATGTCTGACTGA...GAAAACCCAACAATAGGGCAAGGTCACAAAGTTTCTAAATGAAACTGTACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080001.9 ENSMUST00000111302.4 |
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