Pregenerated sensors for UCP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032942Ensembl transcript IDs: ENSMUST00000032958.14, ENSMUST00000107059.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCAGGTGGAGCTGGTCAGGAGCCTGGCAGGTAGGACCCTGAGATaGGAAAACCTCCGAGAGAGAAGGCAGAAGAGCAGCTGTTCTCGT | + |
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Preference number: 1 (lower is better) Translates to: GQVELVRSLAGRTLR*ENLRERRQKSSCSR Trigger: ACGAGAACAGCTGCTCTTCTGCCTTCTCTCTCGGAGGTTTTCTCATCTCAGGGTCCTACCTGCCAGGCTCCTGACCAGCTCCACCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 90 bp | AGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTaGGCCTGTGTCCCCAGGGCAGAGACGCTTTGTTCTGTTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSVSRVSSSAGFWTV*ACVPRAETLCSVPG Trigger: GCCTGGAACAGAACAAAGCGTCTCTGCCCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| 3UTR CCA 90 bp | TCCTCTTTTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTaGACCGTGTGGGCCTGTGTCCCCAGGGCAGAGACGCTTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSFSSVSRVSSSAGF*TVWACVPRAETLCS Trigger: AGAACAAAGCGTCTCTGCCCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAAAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| 3UTR TCA 90 bp | AGAGTCTACTTGGCAGACTCATTACAGAGGGGCGGAGTCATCTGGTaGCCAGAAGGCTGTAGTCACCTCTTTGTGCTGAAGCCGAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RVYLADSLQRGGVIW*PEGCSHLFVLKPKG Trigger: ACCCTTCGGCTTCAGCACAAAGAGGTGACTACAGCCTTCTGGTCACCAGATGACTCCGCCCCTCTGTAATGAGTCTGCCAAGTAGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 90 bp | CCCATGGCTTCCGTCACCCCTGGTCCTTACCATGCAGTCCAGGTGTaGATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTC | + |
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Preference number: 1 (lower is better) Translates to: PMASVTPGPYHAVQV*MALPLQTAFSSNYF Trigger: GAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATGGTAAGGACCAGGGGTGACGGAAGCCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 90 bp | TTAAGCTTGGAAGTTGGTCCTGTGCTTTGCCCTCCCTTTTGCAGATaGAAGACTGAAGGCTTAACAGGAGGAGCAAAGGCTCTGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSLEVGPVLCPPFCR*KTEGLTGGAKALQP Trigger: TGGCTGCAGAGCCTTTGCTCCTCCTGTTAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGACCAACTTCCAAGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 90 bp | TGGCTTCCGTCACCCCTGGTCCTTACCATGCAGTCCAGGTGTGCATaGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: WLPSPLVLTMQSRCA*LYHYKLHFPQTTSL Trigger: CAGAGAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATGGTAAGGACCAGGGGTGACGGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 90 bp | CAATGTGTTCTTTCTCCTTTCCCCAGAATCTTGATAGAGTCTACTTaGCAGACTCATTACAGAGGGGCGGAGTCATCTGGTGACCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: QCVLSPFPRILIEST*QTHYRGAESSGDQK Trigger: CTTCTGGTCACCAGATGACTCCGCCCCTCTGTAATGAGTCTGCCAAGTAGACTCTATCAAGATTCTGGGGAAAGGAGAAAGAACACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 90 bp | ATCGTGTTTGTACATATGTACAGTCACATGTATAGGGCGCTCAAATaGAGGTCAGAGGACAATTTGCAAGAGTCCATTCTGTCCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: IVFVHMYSHMYRALK*RSEDNLQESILSFH Trigger: GTGGAAGGACAGAATGGACTCTTGCAAATTGTCCTCTGACCTCCATTTGAGCGCCCTATACATGTGACTGTACATATGTACAAACACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 90 bp | TCCTTACCATGCAGTCCAGGTGTGCATGGCTTTACCACTACAAACTaGATTTTCCTCAAACTACTTCTCTGGACAGAATCTCTCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SLPCSPGVHGFTTTN*IFLKLLLWTESLLK Trigger: TTTTAGGAGAGATTCTGTCCAGAGAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATGGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR CCA 90 bp | CACGCTCCATCCTCCAGTGTCCTCGGTGGGCCCAGCACCACTCATTTGTGCAGTTCAAGGACAACACTGTaGGCTGATCTTCTCAAAACC | + |
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Preference number: 2 (lower is better) Translates to: HAPSSSVLGGPSTTHLCSSRTTL*ADLLKT Trigger: GGTTTTGAGAAGATCAGCCCACAGTGTTGTCCTTGA...ACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGACACTGGAGGATGGAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTGGGTTCTGGACCGTGTaGGCCTGTGTCCCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SPGVHGFTTTNCIFLKLLGFWTV*ACVPRA Trigger: TGCCCTGGGGACACAGGCCCACACGGTCCAGAACCC...AAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR GCA 90 bp | GGAAATTCTTTTACCAGTCCTAACAATTCCCTAAAGATTCTGAGTCCTGCTGCTTCGTGTCAGCAGCAGTaGAGGGTTCTGGACCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GNSFTSPNNSLKILSPAASCQQQ*RVLDRV Trigger: CACACGGTCCAGAACCCTGCACTGCTGCTGACACGA...AGCAGCAGGACTCAGAATCTTTAGGGAATTGTTAGGACTGGTAAAAGAATTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCGGTGGGCCCAGCACCACTCATTTGTGCAGTATCAATGTGTTCTTTCTCTTGATAGAGTCTACTTaGCAGACTCATTACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VLGGPSTTHLCSINVFFLLIEST*QTHYRG Trigger: CCCTCTGTAATGAGTCTGCCAAGTAGACTCTATCAA...GAGAAAGAACACATTGATACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CAA 90 bp | TCATTTGTGCAGTATCAATGTGTTCTTTCTCCTTTCCCCAGAATCTaGATAGAGTCTACTTGGCAGACTCATTACAGAGGGGCGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SFVQYQCVLSPFPRI*IESTWQTHYRGAES Trigger: TGACTCCGCCCCTCTGTAATGAGTCTGCCAAGTAGACTCTATCAAGATTCTGGGGAAAGGAGAAAGAACACATTGATACTGCACAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTCTCTCTTCTCAAAACCTGTaGCTTTCCTGTTTATTATGC | + |
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Preference number: 2 (lower is better) Translates to: PGVHGFTTTNCIFLKLLLSSQNL*LSCLLC Trigger: GCATAATAAACAGGAAAGGCACAGGTTTTGAGAAGA...GAGAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 72 bp | AGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTaGACCGTGTGGGCCTGTGTCCCCAGGGCAGAGACG | + |
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Preference number: 3 (lower is better) Translates to: SSVSRVSSSAGF*TVWACVPRAET Trigger: CGTCTCTGCCCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| 3UTR CCA 72 bp | TACCAGGCACCGGATCCCCATGGCTTCCGTCACCCCTaGTCCTTACCATGCAGTCCAGGTGTGCATGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: YQAPDPHGFRHP*SLPCSPGVHGF Trigger: AAAGCCATGCACACCTGGACTGCATGGTAAGGACCAGGGGTGACGGAAGCCATGGGGATCCGGTGCCTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR TCA 72 bp | GAGCTGGTCAGGAGCCTGGCAGGTAGGACCCTGAGATaGGAAAACCTCCGAGAGAGAAGGCAGAAGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ELVRSLAGRTLR*ENLRERRQKSS Trigger: GCTGCTCTTCTGCCTTCTCTCTCGGAGGTTTTCTCATCTCAGGGTCCTACCTGCCAGGCTCCTGACCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR TCA 72 bp | AGGTGGAGCTGGTCAGGAGCCTGGCAGGTAGGACCCTaGGATGAGAAAACCTCCGAGAGAGAAGGCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RWSWSGAWQVGP*DEKTSEREGRR Trigger: TCTTCTGCCTTCTCTCTCGGAGGTTTTCTCATCTCAGGGTCCTACCTGCCAGGCTCCTGACCAGCTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR TCA 72 bp | TCCTGTGCTTTGCCCTCCCTTTTGCAGATGGAAGACTaGAGGCTTAACAGGAGGAGCAAAGGCTCTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SCALPSLLQMED*RLNRRSKGSAA Trigger: GGCTGCAGAGCCTTTGCTCCTCCTGTTAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR TCA 72 bp | TTGGCAGACTCATTACAGAGGGGCGGAGTCATCTGGTaGCCAGAAGGCTGTAGTCACCTCTTTGTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: LADSLQRGGVIW*PEGCSHLFVLK Trigger: CTTCAGCACAAAGAGGTGACTACAGCCTTCTGGTCACCAGATGACTCCGCCCCTCTGTAATGAGTCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | TCCAGTGTCCTCGGTGGGCCCAGCACCACTCATTTGTaGAGTATCAATGTGTTCTTTCTCCTTTCCCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SSVLGGPSTTHL*SINVFFLLSPE Trigger: TTCTGGGGAAAGGAGAAAGAACACATTGATACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGACACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | TCCGTCACCCCTGGTCCTTACCATGCAGTCCAGGTGTaGATGGCTTTACCACTACAAACTGCATTTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SVTPGPYHAVQV*MALPLQTAFSS Trigger: TGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATGGTAAGGACCAGGGGTGACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | AGCTTGGAAGTTGGTCCTGTGCTTTGCCCTCCCTTTTaGAGATGGAAGACTGAAGGCTTAACAGGAGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLEVGPVLCPPF*RWKTEGLTGGA Trigger: TGCTCCTCCTGTTAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGACCAACTTCCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 72 bp | GAAGTTGGTCCTGTGCTTTGCCCTCCCTTTTGCAGATaGAAGACTGAAGGCTTAACAGGAGGAGCAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: EVGPVLCPPFCR*KTEGLTGGAKA Trigger: AGCCTTTGCTCCTCCTGTTAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGACCAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 72 bp | GTCCATTCTGTCCTTCCACCATGTGGGTCCCATGAATaGACCCCACTGAGCCATTTTGTTGTCAGATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: VHSVLPPCGSHE*TPLSHFVVRCA Trigger: TGCACATCTGACAACAAAATGGCTCAGTGGGGTCCATTCATGGGACCCACATGGTGGAAGGACAGAATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | ACGATGACAGGCCTTGTTAGGAAGTGCTTCCATGTCTaGTTCGCTTTCTATCTTCCCAACACCCTGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: TMTGLVRKCFHV*FAFYLPNTLMR Trigger: CCTCATCAGGGTGTTGGGAAGATAGAAAGCGAAGCAGACATGGAAGCACTTCCTAACAAGGCCTGTCATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 72 bp | TCACCCCTGGTCCTTACCATGCAGTCCAGGTGTGCATaGCTTTACCACTACAAACTGCATTTTCCTCAAACT | + |
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Preference number: 3 (lower is better) Translates to: SPLVLTMQSRCA*LYHYKLHFPQT Trigger: AGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATGGTAAGGACCAGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | CGAGAGAGAAGGCAGAAGAGCAGCTGTTCTCGTTCTTaGCCTAAGGTGGAAATTCTTTTACCAGTCCTAACA | + |
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Preference number: 3 (lower is better) Translates to: RERRQKSSCSRS*PKVEILLPVLT Trigger: TGTTAGGACTGGTAAAAGAATTTCCACCTTAGGGCAAGAACGAGAACAGCTGCTCTTCTGCCTTCTCTCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | TGTGCATTTTTAAGCTTGGAAGTTGGTCCTGTGCTTTaGCCTCCCTTTTGCAGATGGAAGACTGAAGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: CAFLSLEVGPVL*PPFCRWKTEGL Trigger: TAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGACCAACTTCCAAGCTTAAAAATGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR CAA 90 bp | GTTGGTCCTGTGCTTTGCCCTCCCTTTTGCAGATGGAAGACTGAAGGCTTAACATACATTTCAAGGGAGTaGACTCTGGTTTTCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VGPVLCPPFCRWKTEGLTYISRE*TLVFFV Trigger: AACAAAGAAAACCAGAGTCAACTCCCTTGAAATGTA...TGTTAAGCCTTCAGTCTTCCATCTGCAAAAGGGAGGGCAAAGCACAGGACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | TCAAGGGAGTTGACTCTGGTTTTCTTTGTTGTCTCTTaGCTAAATGTTAGGCATCCAACCGGAAGGGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SRELTLVFFVVS*LNVRHPTGRGL Trigger: TAAACCCCTTCCGGTTGGATGCCTAACATTTAGGCAAGAGACAACAAAGAAAACCAGAGTCAACTCCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR GCA 72 bp | TGCAGTCCAGGTGTGCATGGCTTTACCACTACAAACTaGATTTTCCTCAAACTACTTCTCTGGACAGAATCT | + |
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Preference number: 3 (lower is better) Translates to: CSPGVHGFTTTN*IFLKLLLWTES Trigger: AGATTCTGTCCAGAGAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR CCA 72 bp | GTACATATGTACAGTCACATGTATAGGGCGCTCAAATaGAGGTCAGAGGACAATTTGCAAGAGTCCATTCTG | + |
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Preference number: 3 (lower is better) Translates to: VHMYSHMYRALK*RSEDNLQESIL Trigger: CAGAATGGACTCTTGCAAATTGTCCTCTGACCTCCATTTGAGCGCCCTATACATGTGACTGTACATATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| 3UTR-3UTR CAA 90 bp | AGTCCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTGTTCCTCCGACCATTTaGTTTGATTCAAGGACAACA | + |
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Preference number: 3 (lower is better) Translates to: SPGVHGFTTTNCIFLKLLVPPTI*FDSRTT Trigger: TGTTGTCCTTGAATCAAACAAAATGGTCGGAGGAAC...AAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR GCA 90 bp | GTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCCCCAGGGCAGTACAGTGCAGAGGGCTaGGGTACCTGCCTAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VSAAVQGSGPCGPVSPGQYSAEG*GTCLGE Trigger: CTCCCCTAGGCAGGTACCGCAGCCCTCTGCACTGTA...CTGCCCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR GCA 90 bp | TGTGTCCCCAGGGCAGAGACGCTTTGTTCTGTTCCAGGCAGCCTGCTTGCCTTGGTCCGCTGTAGGGGCTaGGGGGACCCTCTGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: CVPRAETLCSVPGSLLALVRCRG*GDPLCA Trigger: TGCGCACAGAGGGTCCCCGCAGCCCCTACAGCGGAC...CAAGGCAAGCAGGCTGCCTGGAACAGAACAAAGCGTCTCTGCCCTGGGGACACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR GCA 90 bp | TCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCCCCAGGTACAGTGCAGAGGGCTaGGGTACCTGCCTAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRVSSSAGFWTVWACVPRYSAEG*GTCLGE Trigger: CTCCCCTAGGCAGGTACCGCAGCCCTCTGCACTGTA...CCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCCCCAGCACGCTCTGAGCCCCTaGGTTCTCCCCTTGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: FSCQQQCRVLDRVGLCPQHALSP*VLPLDL Trigger: CAGATCCAAGGGGAGAACCCAGGGGCTCAGAGCGTG...CTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCCCCAGGCTTTGTAGAAGGCCGTaGGTCCCTCCTGAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SRVSSSAGFWTVWACVPRLCRRP*VPPEPP Trigger: TGGTGGCTCAGGAGGGACCCACGGCCTTCTACAAAG...CCTGGGGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCGGTACTGCACGCTCTaGGCCCCTGGGTTCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: FSFSCQQQCRVLDRVGLCRYCTL*APGFSP Trigger: AGGGGAGAACCCAGGGGCTCAGAGCGTGCAGTACCG...ACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTGCCGTGGGTCCCTCCTaGGCCACCATCTTCAGCATA | + |
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Preference number: 4 (lower is better) Translates to: FSFSCQQQCRVLDRVGLCAVGPS*ATIFSI Trigger: TATGCTGAAGATGGTGGCTCAGGAGGGACCCACGGC...ACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTCGCAGGTCACTGCCATaGCTCCTGTCGTGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LVQFLVSAAVQGSGPCGPRRSLP*LLSCSL Trigger: CAGGCTGCACGACAGGAGCCATGGCAGTGACCTGCG...AGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | AGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGGGAGGCCACCACTGTaGCACAGAAGCCAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SSVSRVSSSAGFWTVWACGRPPL*HRSQLQ Trigger: TTGGAGCTGGCTTCTGTGCCACAGTGGTGGCCTCCC...ACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | TTAACAGGAGGAGCAAAGGCTCTGCAGCCAAAGGCAGCGAGAGCAGGAGGAAGTGCCGTGGGTCCCTCCTaGGCCACCATCTTCAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LTGGAKALQPKAARAGGSAVGPS*ATIFSI Trigger: TATGCTGAAGATGGTGGCTCAGGAGGGACCCACGGC...ACTTCCTCCTGCTCTCGCTGCCTTTGGCTGCAGAGCCTTTGCTCCTCCTGTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR GCA 90 bp | TTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTCAAAACAGGCCGCAGTaGCGGCCCCCAGGAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LVQFLVSAAVQGSGPCGPQNRPQ*RPPGTS Trigger: TGAAGTTCCTGGGGGCCGGCACTGCGGCCTGTTTTG...AGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTTTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGCCTTCACCACATCCGTaGGCTGGGCGCAGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: SPLLVQFLVSAAVQGSGPPSPHP*AGRRSL Trigger: CAGTGACCTGCGCCCAGCCCACGGATGTGGTGAAGG...CGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAAAAGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | TGTGTCCCCAGGGCAGAGACGCTTTGTTCTGTTCCAGGCAGCCTGCTTGCCTTGAGGCGTATCATGGCTTaGAATCGGACCTTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: CVPRAETLCSVPGSLLALRRIMA*NRTFTT Trigger: TGTGGTGAAGGTCCGATTTCAAGCCATGATACGCCT...CAAGGCAAGCAGGCTGCCTGGAACAGAACAAAGCGTCTCTGCCCTGGGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | CACGCTCCATCCTCCAGTGTCCTCGGTGGGCCCAGCACCACTCATTTGTGCAGTTTCCCAGGCGTATCATaGCTTGAAATCGGACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HAPSSSVLGGPSTTHLCSFPGVS*LEIGPS Trigger: TGAAGGTCCGATTTCAAGCCATGATACGCCTGGGAA...ACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGACACTGGAGGATGGAGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTTTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGGGGAGGCCACCACTGTaGCACAGAAGCCAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SPLLVQFLVSAAVQGSGPGRPPL*HRSQLQ Trigger: TTGGAGCTGGCTTCTGTGCCACAGTGGTGGCCTCCC...CGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAAAAGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTTTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGCTTTGTAGAAGGCCGTaGGTCCCTCCTGAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SPLLVQFLVSAAVQGSGPLCRRP*VPPEPP Trigger: TGGTGGCTCAGGAGGGACCCACGGCCTTCTACAAAG...CGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAAAAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTGATTCCCGCAGTACCTaGACTTTCATTAAGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FSFSCQQQCRVLDRVGLCDSRST*TFIKAL Trigger: GAGGGCCTTAATGAAAGTCCAGGTACTGCGGGAATC...ACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | AGGACGAAACACGGAGGACTAAAACTCTCCTCTTTTAGTTCAGTTTCTCGTGTCCGGTACTGCACGCTCTaGGCCCCTGGGTTCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RTKHGGLKLSSFSSVSRVRYCTL*APGFSP Trigger: AGGGGAGAACCCAGGGGCTCAGAGCGTGCAGTACCG...GACACGAGAAACTGAACTAAAAGAGGAGAGTTTTAGTCCTCCGTGTTTCGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTGTCCGCTGTAGGGGCTaGGGGGACCCTCTGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SPGVHGFTTTNCIFLKLLVRCRG*GDPLCA Trigger: TGCGCACAGAGGGTCCCCGCAGCCCCTACAGCGGAC...AAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTTTCCCAGGCGTATCATaGCTTGAAATCGGACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FSFSCQQQCRVLDRVGLCFPGVS*LEIGPS Trigger: TGAAGGTCCGATTTCAAGCCATGATACGCCTGGGAA...ACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| 3UTR CAA 72 bp | TCCTCCAGTGTCCTCGGTGGGCCCAGCACCACTCATTaGTGCAGTATCAATGTGTTCTTTCTCCTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSSVLGGPSTTH*CSINVFFLLSP Trigger: TGGGGAAAGGAGAAAGAACACATTGATACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGACACTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CCA 90 bp | CCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTCTCCGCAGGTCACTGCCATaGCTCCTGTCGTGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGVHGFTTTNCIFLKLLLRRSLP*LLSCSL Trigger: CAGGCTGCACGACAGGAGCCATGGCAGTGACCTGCG...GAGAAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR TCA 90 bp | TCTCCTCTTTTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGAGGCGTATCATGGCTTaGAATCGGACCTTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: SPLLVQFLVSAAVQGSGPRRIMA*NRTFTT Trigger: TGTGGTGAAGGTCCGATTTCAAGCCATGATACGCCT...CGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAAAAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | AGGACGAAACACGGAGGACTAAAACTCTCCTCTTTTAGTTCAGTTTCTCGTGTCCACGCTCTGAGCCCCTaGGTTCTCCCCTTGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: RTKHGGLKLSSFSSVSRVHALSP*VLPLDL Trigger: CAGATCCAAGGGGAGAACCCAGGGGCTCAGAGCGTG...GACACGAGAAACTGAACTAAAAGAGGAGAGTTTTAGTCCTCCGTGTTTCGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCGGTGGGCCCAGCACCACTCATTTGTGCAGTATCAATGTGTTCTTTCTCGATTCCCGCAGTACCTaGACTTTCATTAAGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VLGGPSTTHLCSINVFFLDSRST*TFIKAL Trigger: GAGGGCCTTAATGAAAGTCCAGGTACTGCGGGAATC...GAGAAAGAACACATTGATACTGCACAAATGAGTGGTGCTGGGCCCACCGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR GCA 90 bp | GGAAATTCTTTTACCAGTCCTAACAATTCCCTAAAGATTCTGAGTCCTGCTGCTCTGGGCGCAGGTCACTaGCATGGCTCCTGTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GNSFTSPNNSLKILSPAALGAGH*HGSCRA Trigger: TGCACGACAGGAGCCATGGCAGTGACCTGCGCCCAG...AGCAGCAGGACTCAGAATCTTTAGGGAATTGTTAGGACTGGTAAAAGAATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR GCA 90 bp | AGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTAAGGCCCTCTTCAGTTaGTCATATGTTACAAACATC | + |
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Preference number: 4 (lower is better) Translates to: SSVSRVSSSAGFWTVWACKALFS*SYVTNI Trigger: GATGTTTGTAACATATGAGCAACTGAAGAGGGCCTT...ACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCCAGCACCACTCATTTGTGCAGTATCAATGTGTTCTTTCTCCTTTCCCCCAATGGCATTTCTTGTaGTGTTGGGCCAAGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: WAQHHSFVQYQCVLSPFPQWHFL*CWAKSL Trigger: AAGGGACTTGGCCCAACATCACAAGAAATGCCATTG...GGGGAAAGGAGAAAGAACACATTGATACTGCACAAATGAGTGGTGCTGGGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR GCA 90 bp | TTTAGGACGAAACACGGAGGACTAAAACTCTCCTCTTTTAGTTCAGTTTCTCGTCAAAACAGGCCGCAGTaGCGGCCCCCAGGAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: FRTKHGGLKLSSFSSVSRQNRPQ*RPPGTS Trigger: TGAAGTTCCTGGGGGCCGGCACTGCGGCCTGTTTTG...ACGAGAAACTGAACTAAAAGAGGAGAGTTTTAGTCCTCCGTGTTTCGTCCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| 3UTR CAA 72 bp | TCTTTCTCCTTTCCCCAGAATCTTGATAGAGTCTACTaGGCAGACTCATTACAGAGGGGCGGAGTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFSFPQNLDRVY*ADSLQRGGVIW Trigger: CCAGATGACTCCGCCCCTCTGTAATGAGTCTGCCAAGTAGACTCTATCAAGATTCTGGGGAAAGGAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR TCA 90 bp | AGTCCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTTTGTCAGTAAACAGGTaGGACTCCAGCAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPGVHGFTTTNCIFLKLLLSVNR*DSSNFS Trigger: GGAGAAGTTGCTGGAGTCTCACCTGTTTACTGACAA...AAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR TCA 90 bp | TTTAGGACGAAACACGGAGGACTAAAACTCTCCTCTTTTAGTTCAGTTTCTCGTTTGTCAGTAAACAGGTaGGACTCCAGCAACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FRTKHGGLKLSSFSSVSRLSVNR*DSSNFS Trigger: GGAGAAGTTGCTGGAGTCTCACCTGTTTACTGACAA...ACGAGAAACTGAACTAAAAGAGGAGAGTTTTAGTCCTCCGTGTTTCGTCCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGGTGTGCATGGCTTTACCACTACAAACTGCATTTTCCTCAAACTACTTAAGGCCCTCTTCAGTTaGTCATATGTTACAAACATC | + |
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Preference number: 4 (lower is better) Translates to: SPGVHGFTTTNCIFLKLLKALFS*SYVTNI Trigger: GATGTTTGTAACATATGAGCAACTGAAGAGGGCCTT...AAGTAGTTTGAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CAA 90 bp | AGGACTGTTATCCCAGATCACGCTCCATCCTCCAGTGTCCTCGGTGGGCCCAGCCCCTGGGTTCTCCCCTaGGATCTGCAGACGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: RTVIPDHAPSSSVLGGPSPWVLP*DLQTDL Trigger: AAGGTCCGTCTGCAGATCCAAGGGGAGAACCCAGGG...GCTGGGCCCACCGAGGACACTGGAGGATGGAGCGTGATCTGGGATAACAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CAA 90 bp | AGGACTGTTATCCCAGATCACGCTCCATCCTCCAGTGTCCTCGGTGGGCCCAGCGGAACTTCACAACCGTaGTGGGAGGCACTTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RTVIPDHAPSSSVLGGPSGTSQP*WEALRR Trigger: CCTCCGAAGTGCCTCCCACAACGGTTGTGAAGTTCC...GCTGGGCCCACCGAGGACACTGGAGGATGGAGCGTGATCTGGGATAACAGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS-3UTR CAA 90 bp | CAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTGTGTCCGGAACTTCACAACCGTaGTGGGAGGCACTTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QFLVSAAVQGSGPCGPVSGTSQP*WEALRR Trigger: CCTCCGAAGTGCCTCCCACAACGGTTGTGAAGTTCC...GGACACAGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS CCA 90 bp | CTCCCAGACGCAGAAAGGAGGGCACAAATCCTTTGTAGAAGGCCGTaGGTCCCTCCTGAGCCACCATCTTCAGCATACAGTGCAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LPDAERRAQILCRRP*VPPEPPSSAYSAEG Trigger: GCCCTCTGCACTGTATGCTGAAGATGGTGGCTCAGGAGGGACCCACGGCCTTCTACAAAGGATTTGTGCCCTCCTTTCTGCGTCTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CAA 90 bp | TTAGTTCAGTTTCTCGTGTCAGCAGCAGTGCAGGGTTCTGGACCGTGTGGGCCTCCCTGGGTTCTCCCCTaGGATCTGCAGACGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: LVQFLVSAAVQGSGPCGPPWVLP*DLQTDL Trigger: AAGGTCCGTCTGCAGATCCAAGGGGAGAACCCAGGG...AGGCCCACACGGTCCAGAACCCTGCACTGCTGCTGACACGAGAAACTGAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS-3UTR CAA 90 bp | CATGTCTGCTTCGCTTTCTATCTTCCCAACACCCTGATGAGGCAGACAGAGAAGCAGGCGTATCATGGCTaGAAATCGGACCTTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: HVCFAFYLPNTLMRQTEKQAYHG*KSDLHH Trigger: GTGGTGAAGGTCCGATTTCAAGCCATGATACGCCTG...CTTCTCTGTCTGCCTCATCAGGGTGTTGGGAAGATAGAAAGCGAAGCAGACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032958.14 |
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| CDS GCA 90 bp | GGAGATTCCCGCAGTACCTGGACTTTCATTAAGGCCCTCTTCAGTTaGTCATATGTTACAAACATCATCACGTTCCAAGCTCCCAGACGC | + |
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Preference number: 5 (lower is better) Translates to: GDSRSTWTFIKALFS*SYVTNIITFQAPRR Trigger: GCGTCTGGGAGCTTGGAACGTGATGATGTTTGTAACATATGAGCAACTGAAGAGGGCCTTAATGAAAGTCCAGGTACTGCGGGAATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS TCA 72 bp | CTGCCATGGCTCCTGTCGTGCAGCCTGCCAGAATCCTaGTGGCGACGCTGGAGTGGTCCGCTCCCTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LPWLLSCSLPES*WRRWSGPLPWG Trigger: CCCCCAAGGGAGCGGACCACTCCAGCGTCGCCATCAGGATTCTGGCAGGCTGCACGACAGGAGCCATGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS CAA 72 bp | AGGCCGCAGTGCCGGCCCCCAGGAACTTCACAACCGTaGTGGGAGGCACTTCGGAGGGCTGAAGTCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: RPQCRPPGTSQP*WEALRRAEVQP Trigger: TGGTTGGACTTCAGCCCTCCGAAGTGCCTCCCACAACGGTTGTGAAGTTCCTGGGGGCCGGCACTGCGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS GCA 72 bp | CCTGAGCCACCATCTTCAGCATACAGTGCAGAGGGCTaGGGTACCTGCCTAGGGGAGCGTTCATGTATCGGG | + |
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Preference number: 6 (lower is better) Translates to: PEPPSSAYSAEG*GTCLGERSCIG Trigger: CCCGATACATGAACGCTCCCCTAGGCAGGTACCGCAGCCCTCTGCACTGTATGCTGAAGATGGTGGCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS GCA 72 bp | CCATCTTCAGCATACAGTGCAGAGGGCTGCGGTACCTaGCTAGGGGAGCGTTCATGTATCGGGTCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: PSSAYSAEGCGT*LGERSCIGSLP Trigger: TGGTAAAGACCCGATACATGAACGCTCCCCTAGGCAGGTACCGCAGCCCTCTGCACTGTATGCTGAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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| CDS CCA 72 bp | GCAGAAAGGAGGGCACAAATCCTTTGTAGAAGGCCGTaGGTCCCTCCTGAGCCACCATCTTCAGCATACAGT | + |
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Preference number: 6 (lower is better) Translates to: AERRAQILCRRP*VPPEPPSSAYS Trigger: ACTGTATGCTGAAGATGGTGGCTCAGGAGGGACCCACGGCCTTCTACAAAGGATTTGTGCCCTCCTTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032958.14 ENSMUST00000107059.2 |
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