Pregenerated sensors for UCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033685Ensembl transcript IDs: ENSMUST00000126534.8, ENSMUST00000129324.8, ENSMUST00000133044.3, ENSMUST00000153287.8, ENSMUST00000207748.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGACTTGACAGGCCCCGCCCTGCTCTGGGAGGGACCTCACCGGTaGTTCCTGCTCCTTGAGTGGTCCTGCCTCCCTCTCCTGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: GDLTGPALLWEGPHR*FLLLEWSCLPLLAE Trigger: CTCAGCCAGGAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCCCTCCCAGAGCAGGGCGGGGCCTGTCAAGTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GCCCTGCTCTGGGAGGGACCTCACCGGTGGTTCCTGCTCCTTGAGTaGTCCTGCCTCCCTCTCCTGGCTGAGGAGAGCTGGCGGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: ALLWEGPHRWFLLLE*SCLPLLAEESWRER Trigger: TCTTTCCCGCCAGCTCTCCTCAGCCAGGAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCCCTCCCAGAGCAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR GCA 90 bp | CTCTGGGAGGGACCTCACCGGTGGTTCCTGCTCCTTGAGTGGTCCTaGCTCCCTCTCCTGGCTGAGGAGAGCTGGCGGGAAAGAGGACTG | + |
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Preference number: 1 (lower is better) Translates to: LWEGPHRWFLLLEWS*LPLLAEESWRERGL Trigger: CAGTCCTCTTTCCCGCCAGCTCTCCTCAGCCAGGAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCCCTCCCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GCTGCAGTGTCCCCTGGCTGTGCCACTGATCTCTGGAGCCAACACTaGGTCTGGAGGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: AAVSPGCATDLWSQH*VWRNRLEDPPAPLR Trigger: TCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGATCAGTGGCACAGCCAGGGGACACTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR GCA 90 bp | GGACCGAGACCGGGGCTGGATTTACCAGAAGCTGAGGAGAACTGGTaGTCTTCTCTGGGAGCCAATCGAACAGCCTGGCCTCTTGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPRPGLDLPEAEENW*SSLGANRTAWPLAK Trigger: CTTGGCAAGAGGCCAGGCTGTTCGATTGGCTCCCAGAGAAGAGCACCAGTTCTCCTCAGCTTCTGGTAAATCCAGCCCCGGTCTCGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GTGTCCCCTGGCTGTGCCACTGATCTCTGGAGCCAACACTGGGTCTaGAGGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTAC | + |
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Preference number: 1 (lower is better) Translates to: VSPGCATDLWSQHWV*RNRLEDPPAPLRCY Trigger: GTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGATCAGTGGCACAGCCAGGGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | TCAGGACCGAGACCGGGGCTGGATTTACCAGAAGCTGAGGAGAACTaGTGCTCTTCTCTGGGAGCCAATCGAACAGCCTGGCCTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: SGPRPGLDLPEAEEN*CSSLGANRTAWPLA Trigger: GGCAAGAGGCCAGGCTGTTCGATTGGCTCCCAGAGAAGAGCACCAGTTCTCCTCAGCTTCTGGTAAATCCAGCCCCGGTCTCGGTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | AAGGGTAGGAGGGACAAAGGCTGCAGTGTCCCCTGGCTGTGCCACTaGTCTCTGGAGCCAACACTGGGTCTGGAGGAACAGACTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: KGRRDKGCSVPWLCH*SLEPTLGLEEQTGR Trigger: TCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGATCAGTGGCACAGCCAGGGGACACTGCAGCCTTTGTCCCTCCTACCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | AGGGGCAGAAGCCATCACTTTAGGCCGAGAGGACATCCTATTGTCTaGGCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGC | + |
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Preference number: 1 (lower is better) Translates to: RGRSHHFRPRGHPIV*AQFHSCQTIPQGPS Trigger: GCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAAAGTGATGGCTTCTGCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GTGCCACTGATCTCTGGAGCCAACACTGGGTCTGGAGGAACAGACTaGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGG | + |
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Preference number: 1 (lower is better) Translates to: VPLISGANTGSGGTD*KTLQPLSDVTGRMW Trigger: CCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGATCAGTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | TGTAGAGAGGTTGGGGAACTAGGACTTCTGTCCTGGAGGGCTCTGTaGGAAGCTTGGCCTCAGGCCTCCACCATGCCCTTTATGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: CREVGELGLLSWRAL*EAWPQASTMPFMRS Trigger: GGATCTCATAAAGGGCATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCCCTCCAGGACAGAAGTCCTAGTTCCCCAACCTCTCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | GATAGACAGGCCTGGCCAGTGTGGGTGGGAGTACCAGGTACTGAGTaGCAGCTTACATGGTGTTCAGGAAAGGGTAGGAGGGACAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: DRQAWPVWVGVPGTE*QLTWCSGKGRRDKG Trigger: GCCTTTGTCCCTCCTACCCTTTCCTGAACACCATGTAAGCTGTCACTCAGTACCTGGTACTCCCACCCACACTGGCCAGGCCTGTCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | CCTCGGAGGCCAGAACTCCTGGAACTCGAGTTAAACAGATGGTTGTaGGCTATAGTGTGGGCCCTGGGTCTGGAACCTAGGACCTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: PRRPELLELELNRWL*AIVWALGLEPRTFA Trigger: GGCAAAGGTCCTAGGTTCCAGACCCAGGGCCCACACTATAGCTCACAACCATCTGTTTAACTCGAGTTCCAGGAGTTCTGGCCTCCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | ACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTaGGACAAGCCTGGTCTACAGAGCAAGCTCCAGGATAGCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: TPLIPALGRQMQVDL*DKPGLQSKLQDSQG Trigger: GCCCTGGCTATCCTGGAGCTTGCTCTGTAGACCAGGCTTGTCTCAGAGATCTACCTGCATCTGCCTCCCAAGTGCTGGGATTAAAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | AGGGATACTTCCACTCTGCAGATAGACAGGCCTGGCCAGTGTGGGTaGGAGTACCAGGTACTGAGTGACAGCTTACATGGTGTTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: RDTSTLQIDRPGQCG*EYQVLSDSLHGVQE Trigger: TTCCTGAACACCATGTAAGCTGTCACTCAGTACCTGGTACTCCCACCCACACTGGCCAGGCCTGTCTATCTGCAGAGTGGAAGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTGCCTTaGCGTTCGATGGTGACCCGTAGGAGATGTCTGAAATGTATAAAA | + |
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Preference number: 1 (lower is better) Translates to: AARQSPKDPALCVLP*RSMVTRRRCLKCIK Trigger: TTTTATACATTTCAGACATCTCCTACGGGTCACCATCGAACGCCAAGGCAAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | AGGCCTAAACTTGGTGGTGCAGTGCACACCTTTAATCCCAGCACTTaGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACA | + |
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Preference number: 1 (lower is better) Translates to: RPKLGGAVHTFNPST*EADAGRSLRQAWST Trigger: TGTAGACCAGGCTTGTCTCAGAGATCTACCTGCATCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACTGCACCACCAAGTTTAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | AAACATATGAGAAAGAAGACACCAACATTGAGCTTGCTTTATGGGTaGAGGCTGGCTGAGCTGGGCTGGGCTGGGCTGGGGATGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: KHMRKKTPTLSLLYG*RLAELGWAGLGMKM Trigger: CATCTTCATCCCCAGCCCAGCCCAGCCCAGCTCAGCCAGCCTTCACCCATAAAGCAAGCTCAATGTTGGTGTCTTCTTTCTCATATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | AATGGAAGGTTCTGGAGTTTCCCTACATCTCCTAACAAGTTGATGTaGGAGGGGCAGGGATACTTCCACTCTGCAGATAGACAGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: NGRFWSFPTSPNKLM*EGQGYFHSADRQAW Trigger: CCAGGCCTGTCTATCTGCAGAGTGGAAGTATCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGTAGGGAAACTCCAGAACCTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | CCCAAAATGGAAGGTTCTGGAGTTTCCCTACATCTCCTAACAAGTTaGTGTGGGAGGGGCAGGGATACTTCCACTCTGCAGATAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: PKMEGSGVSLHLLTS*CGRGRDTSTLQIDR Trigger: CCTGTCTATCTGCAGAGTGGAAGTATCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGTAGGGAAACTCCAGAACCTTCCATTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | TCCCTTTTTAAAGACACTGGGGTCCTCACCTGCCTGCCAAGGTCCTaGAAAGGTCCCTTGGACCAAGACCTCTGTAAACATATGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SLFKDTGVLTCLPRS*KGPLDQDLCKHMRK Trigger: CTTTCTCATATGTTTACAGAGGTCTTGGTCCAAGGGACCTTTTCAGGACCTTGGCAGGCAGGTGAGGACCCCAGTGTCTTTAAAAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR TCA 90 bp | TGTCAGCTGTTGGTAGTAAACTGTCCCTTGAAGGACCTAACACAATaGCCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: CQLLVVNCPLKDLTQ*PDPHLLCPCVLKHQ Trigger: CTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCATTGTGTTAGGTCCTTCAAGGGACAGTTTACTACCAACAGCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR GCA 90 bp | CACACCTATATCACATGTCTAGTGAAGGAGCTATTGGACACACTGTaGCCTCTCTTGACCTGTTTGTCAGCTGTTGGTAGTAAACTGTCC | + |
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Preference number: 1 (lower is better) Translates to: HTYITCLVKELLDTL*PLLTCLSAVGSKLS Trigger: GGACAGTTTACTACCAACAGCTGACAAACAGGTCAAGAGAGGGCACAGTGTGTCCAATAGCTCCTTCACTAGACATGTGATATAGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CCA 90 bp | GTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTTTGTaGAATAAAGTTGTTTTGCCTGCATGTTACTGTGCCATACACATG | + |
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Preference number: 1 (lower is better) Translates to: VRFLGKSLHFSRSFL*NKVVLPACYCAIHM Trigger: CATGTGTATGGCACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGCCCTGTCCCCACCCACCCCCGGTTCAGAGCATGTCTCAGGGTGTGATAGGAGGGACAAAGGCTaGAGTGTCCCCTGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RPALSPPTPGSEHVSGCDRRDKG*SVPWLC Trigger: GCACAGCCAGGGGACACTGCAGCCTTTGTCCCTCCT...ATCACACCCTGAGACATGCTCTGAACCGGGGGTGGGTGGGGACAGGGCAGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGGTAGGAGGGACAAAGGCTGCAGTGTCCCCTGGCTGTGCCACTGATCTCAGCTTGCTTTATGGGTaGAGGCTGGCTGAGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ERVGGTKAAVSPGCATDLSLLYG*RLAELG Trigger: GCCCAGCTCAGCCAGCCTTCACCCATAAAGCAAGCT...GAGATCAGTGGCACAGCCAGGGGACACTGCAGCCTTTGTCCCTCCTACCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTCTCACCGGTGGTTCCTaGTCCTTGAGTGGTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLLTGGS*SLSGPA Trigger: GGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAG...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAATCAATGGGTCAGACCTaGCCTGTCCCCACCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LGREDILLSGPSFTAARQSMGQT*PVPTHP Trigger: GGGGTGGGTGGGGACAGGGCAGGTCTGACCCATTGA...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CAA 90 bp | GGTTGGGGAACTAGGACTTCTGTCCTGGAGGGCTCTGTGGGAAGCTaGGCCTCAGGCCTCCACCATGCCCTTTATGAGATCCCTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: GWGTRTSVLEGSVGS*ASGLHHALYEIPVT Trigger: AGTTACAGGGATCTCATAAAGGGCATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCCCTCCAGGACAGAAGTCCTAGTTCCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTACATGGTGTTCAGGAAAGGGTAGGAGGGACAAAGGCTGCAGTGTCCCCTTTATGGGTGAAGGCTaGCTGAGCTGGGCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QLTWCSGKGRRDKGCSVPFMGEG*LSWAGL Trigger: CAGCCCAGCCCAGCTCAGCCAGCCTTCACCCATAAA...GGGGACACTGCAGCCTTTGTCCCTCCTACCCTTTCCTGAACACCATGTAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTCTGGAGGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACATCGGGGTGCAGGAAATaGGAAGAGAATGGGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: TGSGGTDWKTLQPLSDVTSGCRK*EENGTG Trigger: CCCAGTCCCATTCTCTTCCCATTTCCTGCACCCCGA...TGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CAA 90 bp | TTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTaGCCTTGGCGTTCGATGGTGACCCGTAGGAGATGTCTGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FTAARQSPKDPALCV*PWRSMVTRRRCLKC Trigger: ACATTTCAGACATCTCCTACGGGTCACCATCGAACGCCAAGGCAAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTCACATCCCTTTTTAAAGACACTGGGGTCCTCACCTGCCTGCCAAGGTCACAGGGAGGTGAGGTaGGAAGTAAATCGGGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: CGSHPFLKTLGSSPACQGHREVR*EVNRGA Trigger: TGCACCCCGATTTACTTCCCACCTCACCTCCCTGTG...ACCTTGGCAGGCAGGTGAGGACCCCAGTGTCTTTAAAAAGGGATGTGACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCACTGGTGCTCTTCTCTaGGAGCCAATCGAACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: MTRSSFAVPLCAEAPAARTGALL*EPIEQP Trigger: AGGCTGTTCGATTGGCTCCCAGAGAAGAGCACCAGT...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTGCTCTGTGGGAAGCTTaGCCTCAGGCCTCCACCATG | + |
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Preference number: 2 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFALWEA*PQASTM Trigger: CATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGC...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGTTTTCTAAAGACTGCTGCCCCTTCCTCAGGCCAACTGACAGCATTCCTAGCTGTAGAAAGGGCTaGGGGCTCAGGGTCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: MLFSKDCCPFLRPTDSIPSCRKG*GLRVWC Trigger: ACACCAGACCCTGAGCCCTCAGCCCTTTCTACAGCT...AGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTTTAGAAAACAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTCCTGAAAAGGTCCCTTaGACCAAGACCTCTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLPEKVP*TKTSVN Trigger: GTTTACAGAGGTCTTGGTCCAAGGGACCTTTTCAGG...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAATCTTCTGTAGGTCTATaGCCTCAGGAGGTGGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LGREDILLSGPSFTAARQSSVGL*PQEVGC Trigger: GCAACCCACCTCCTGAGGCCATAGACCTACAGAAGA...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR TCA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCCAGGCAGAATTGTCATaGGTTCTAGACTACACAGCG | + |
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Preference number: 2 (lower is better) Translates to: MTRSSFAVPLCAEAPAARQAELS*VLDYTA Trigger: CGCTGTGTAGTCTAGAACTCATGACAATTCTGCCTG...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTGGAAGTAAATCGGGGTaGAGGAAATGGGAAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLGSKSG*RKWEEN Trigger: ATTCTCTTCCCATTTCCTGCACCCCGATTTACTTCC...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTGGAAGAGAATGGGACTaGGCAGAGGATGAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLGREWD*AEDEEK Trigger: TTTTTCTTCATCCTCTGCCCAGTCCCATTCTCTTCC...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTGGGCTGCCTTAGAACAGGCCTGGCCAGTGTaGGTGGGAGTACCAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: LYEIPVTSKAASNWAALEQAWPV*VGVPGT Trigger: AGTACCTGGTACTCCCACCCACACTGGCCAGGCCTG...TTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTCACATCCCTTTTTAAAGACACTGGGGTCCTCACCTGCCTGCCAAGGTGAAATGGGAAGAGAATaGGACTGGGCAGAGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: CGSHPFLKTLGSSPACQGEMGRE*DWAEDE Trigger: TTCATCCTCTGCCCAGTCCCATTCTCTTCCCATTTC...ACCTTGGCAGGCAGGTGAGGACCCCAGTGTCTTTAAAAAGGGATGTGACCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTGTTACAGGCAGAATGTaGGTCACATCCCTTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLVTGRM*VTSLFK Trigger: TTTAAAAAGGGATGTGACCCACATTCTGCCTGTAAC...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGACCTCTGTAAACATATaGGAAAGAAGACACCAACAT | + |
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Preference number: 2 (lower is better) Translates to: GTDWKTLQPLSDVTGRMWTSVNI*ERRHQH Trigger: ATGTTGGTGTCTTCTTTCTCATATGTTTACAGAGGT...CCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTAAGGACCTAACACAATaGCCAGATCCTCATTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFKDLTQ*PDPHLL Trigger: CAGCAAATGAGGATCTGGTCATTGTGTTAGGTCCTT...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGGCTCTAGTTTTTACAGCAAAGACTTCAACCCCTTCATTACAGACCTGTAGCCAACACTGGGTCTaGAGGAACAGACTGGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: CQALVFTAKTSTPSLQTCSQHWV*RNRLED Trigger: GTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCT...ACAGGTCTGTAATGAAGGGGTTGAAGTCTTTGCTGTAAAAACTAGAGCCTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTAGAAGACACCAACATTaGGCTTGCTTTATGGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFRRHQH*ACFMGE Trigger: TTCACCCATAAAGCAAGCTCAATGTTGGTGTCTTCT...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTGGAATAAAGTTGTTTTaGCTGCATGTTACTGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFGIKLF*LHVTVP Trigger: TGGCACAGTAACATGCAGGCAAAACAACTTTATTCC...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 90 bp | TGGGCAAGTCACTTCATTTCTCTAGGTCCTTTTTGTGGAATAAAGTaGTTTTGCCTGCATGTTACTGTGCCATACACATGCTTGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: WASHFISLGPFCGIK*FCLHVTVPYTCLQC Trigger: GCACTGCAAGCATGTGTATGGCACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAATGAAGTGACTTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 90 bp | TCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTTaGTGGAATAAAGTTGTTTTGCCTGCATGTTACTGTGCCATACAC | + |
|
Preference number: 2 (lower is better) Translates to: SVRFLGKSLHFSRSF*WNKVVLPACYCAIH Trigger: GTGTATGGCACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTGGGCTGCCTTAGAACTAAGGTCTCTGCTATaGTGTTTTCTAAAGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LYEIPVTSKAASNWAALELRSLL*CFLKTA Trigger: AGCAGTCTTTAGAAAACAGCATAGCAGAGACCTTAG...TTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | CCGCCCTGCTCTGGGAGGGACCTCACCGGTGGTTCCTaGTCCTTGAGTGGTCCTGCCTCCCTCTCCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPCSGRDLTGGS*SLSGPASLSWL Trigger: CAGCCAGGAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCCCTCCCAGAGCAGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | ACAGGCCCCGCCCTGCTCTGGGAGGGACCTCACCGGTaGTTCCTGCTCCTTGAGTGGTCCTGCCTCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGPALLWEGPHR*FLLLEWSCLPL Trigger: GAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCCCTCCCAGAGCAGGGCGGGGCCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | GGACCTCACCGGTGGTTCCTGCTCCTTGAGTGGTCCTaGCTCCCTCTCCTGGCTGAGGAGAGCTGGCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPHRWFLLLEWS*LPLLAEESWRE Trigger: TTCCCGCCAGCTCTCCTCAGCCAGGAGAGGGAGGCAGGACCACTCAAGGAGCAGGAACCACCGGTGAGGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | GGCTGTGCCACTGATCTCTGGAGCCAACACTGGGTCTaGAGGAACAGACTGGAAGACCCTCCAGCCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GCATDLWSQHWV*RNRLEDPPAPL Trigger: GAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGATCAGTGGCACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | TGCGGCTTGCTGCTGCCTCAGGACCGAGACCGGGGCTaGATTTACCAGAAGCTGAGGAGAACTGGTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CGLLLPQDRDRG*IYQKLRRTGAL Trigger: AAGAGCACCAGTTCTCCTCAGCTTCTGGTAAATCCAGCCCCGGTCTCGGTCCTGAGGCAGCAGCAAGCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | GTTGGGGAACTAGGACTTCTGTCCTGGAGGGCTCTGTaGGAAGCTTGGCCTCAGGCCTCCACCATGCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VGELGLLSWRAL*EAWPQASTMPF Trigger: AAAGGGCATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCCCTCCAGGACAGAAGTCCTAGTTCCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCAACCCTCACTGCGGCTaGCTGCTGCCTCAGGACCGA | + |
|
Preference number: 3 (lower is better) Translates to: MTRSSFAVPLCAEAPAARNPHCG*LLPQDR Trigger: TCGGTCCTGAGGCAGCAGCAAGCCGCAGTGAGGGTT...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | CCGGGGCTGGATTTACCAGAAGCTGAGGAGAACTGGTaGTCTTCTCTGGGAGCCAATCGAACAGCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGLDLPEAEENW*SSLGANRTAWP Trigger: AGGCCAGGCTGTTCGATTGGCTCCCAGAGAAGAGCACCAGTTCTCCTCAGCTTCTGGTAAATCCAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | CTAGGACTTCTGTCCTGGAGGGCTCTGTGGGAAGCTTaGCCTCAGGCCTCCACCATGCCCTTTATGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LGLLSWRALWEA*PQASTMPFMRS Trigger: GGATCTCATAAAGGGCATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCCCTCCAGGACAGAAGTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | GCCTGGCCAGTGTGGGTGGGAGTACCAGGTACTGAGTaGCAGCTTACATGGTGTTCAGGAAAGGGTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AWPVWVGVPGTE*QLTWCSGKGRR Trigger: CCTCCTACCCTTTCCTGAACACCATGTAAGCTGTCACTCAGTACCTGGTACTCCCACCCACACTGGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | ATCTCTGGAGCCAACACTGGGTCTGGAGGAACAGACTaGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISGANTGSGGTD*KTLQPLSDVTG Trigger: GCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGTGTTGGCTCCAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | AGACCGGGGCTGGATTTACCAGAAGCTGAGGAGAACTaGTGCTCTTCTCTGGGAGCCAATCGAACAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPGLDLPEAEEN*CSSLGANRTAW Trigger: CCAGGCTGTTCGATTGGCTCCCAGAGAAGAGCACCAGTTCTCCTCAGCTTCTGGTAAATCCAGCCCCGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | ACCAACATTGAGCTTGCTTTATGGGTGAAGGCTGGCTaGGCTGGGCTGGGCTGGGCTGGGGATGAAGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TNIELALWVKAG*AGLGWAGDEDE Trigger: TTCATCTTCATCCCCAGCCCAGCCCAGCCCAGCTCAGCCAGCCTTCACCCATAAAGCAAGCTCAATGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | AGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTaGCAGACAATCCCCCAAGGACCCAGCACTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGHPIVWAQFHS*QTIPQGPSTVC Trigger: ACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCACATCTCCTAACAAGTaGATGTGGGAGGGGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MTRSSFAVPLCAEAPAARTSPNK*MWEGQG Trigger: TCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGT...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTaGGACAAGCCTGGTCTACAGAGCAAGCTCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQMQVDL*DKPGLQSKLQD Trigger: ATCCTGGAGCTTGCTCTGTAGACCAGGCTTGTCTCAGAGATCTACCTGCATCTGCCTCCCAAGTGCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | TGCCTGCATGTTACTGTGCCATACACATGCTTGCAGTaGCCTCGGAGGCCAGAACTCCTGGAACTCGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CLHVTVPYTCLQ*PRRPELLELEL Trigger: TAACTCGAGTTCCAGGAGTTCTGGCCTCCGAGGGCACTGCAAGCATGTGTATGGCACAGTAACATGCAGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | AGCCATCACTTTAGGCCGAGAGGACATCCTATTGTCTaGGCCCAGTTTCACAGCTGCCAGACAATCCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHHFRPRGHPIV*AQFHSCQTIPQ Trigger: TTGGGGGATTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAAAGTGATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | CCAGAACTCCTGGAACTCGAGTTAAACAGATGGTTGTaGGCTATAGTGTGGGCCCTGGGTCTGGAACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PELLELELNRWL*AIVWALGLEPR Trigger: CCTAGGTTCCAGACCCAGGGCCCACACTATAGCTCACAACCATCTGTTTAACTCGAGTTCCAGGAGTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | CTCTTCTCTGGGAGCCAATCGAACAGCCTGGCCTCTTaGCAAGCACTGGGAAGGTCTAACTTTTTAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LFSGSQSNSLAS*QALGRSNFLAL Trigger: CAGAGCTAAAAAGTTAGACCTTCCCAGTGCTTGGCAAGAGGCCAGGCTGTTCGATTGGCTCCCAGAGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | TATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTaGGCTGCCTTAGAAGGCAAAGCAGGGCGTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YEIPVTSKAASN*AALEGKAGRLV Trigger: CACCAGACGCCCTGCTTTGCCTTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAAGCCTCAGGAGGTGGGTaGCTATGTGTAAAACAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGREDILLSGPSFTAARQASGGG*LCVKQS Trigger: ACTCTGTTTTACACATAGCAACCCACCTCCTGAGGC...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACTGCTGCCCCTTCCTCAGGCCAACTGACAGCATTCCTAGTCATGGAGTCTAGTGTGAAGCCCCGTTaGAAACAACAACAACACCCC | + |
|
Preference number: 3 (lower is better) Translates to: KTAAPSSGQLTAFLVMESSVKPR*KQQQHP Trigger: GGGGTGTTGTTGTTGTTTCAAACGGGGCTTCACACT...AGACTCCATGACTAGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCGCTGTAATCCCAGCCTaGAGAAACTCAGGCAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: MTRSSFAVPLCAEAPAARAVIPA*RNSGRI Trigger: AATTCTGCCTGAGTTTCTCAAGGCTGGGATTACAGC...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGGCTCTAGTTTTTACAGCAAAGACTTCAACCCCTTCATTACAGACCTGTGGCTCTGTGGGAAGCTaGGCCTCAGGCCTCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: CQALVFTAKTSTPSLQTCGSVGS*ASGLHH Trigger: ATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCC...ACAGGTCTGTAATGAAGGGGTTGAAGTCTTTGCTGTAAAAACTAGAGCCTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | GAAGGTTCTGGAGTTTCCCTACATCTCCTAACAAGTTaGTGTGGGAGGGGCAGGGATACTTCCACTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EGSGVSLHLLTS*CGRGRDTSTLQ Trigger: CTGCAGAGTGGAAGTATCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGTAGGGAAACTCCAGAACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | TGCATCCCTCTGGAAGCATTGCTAAGGTCTCTGCTATaGTGTTTTCTAAAGACTGCTGCCCCTTCCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CIPLEALLRSLL*CFLKTAAPSSG Trigger: GCCTGAGGAAGGGGCAGCAGTCTTTAGAAAACAGCATAGCAGAGACCTTAGCAATGCTTCCAGAGGGATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | CCTAGGACCTTTGCCAGAGTTGCTAGTGTTCTTGACTaGCAAGCCATCTTTCCAGCCCTCAGGATCCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRTFARVASVLD*QAIFPALRIHL Trigger: AAGATGGATCCTGAGGGCTGGAAAGATGGCTTGGCAGTCAAGAACACTAGCAACTCTGGCAAAGGTCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | AAGTTGTTTTGCCTGCATGTTACTGTGCCATACACATaGTTGCAGTGCCCTCGGAGGCCAGAACTCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLFCLHVTVPYT*LQCPRRPELLE Trigger: TTCCAGGAGTTCTGGCCTCCGAGGGCACTGCAAGCATGTGTATGGCACAGTAACATGCAGGCAAAACAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGTTTTCTAAAGACTGCTGCCCCTTCCTCAGGCCAACTGACAGCATTCCTCCTGTTTGTCAGCTGTaGGTAGTAAACTGTCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MLFSKDCCPFLRPTDSIPPVCQL*VVNCPL Trigger: CAAGGGACAGTTTACTACCAACAGCTGACAAACAGG...AGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTTTAGAAAACAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | ATTGCTAAGGTCTCTGCTATGCTGTTTTCTAAAGACTaGTGCCCCTTCCTCAGGCCAACTGACAGCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IAKVSAMLFSKD*CPFLRPTDSIP Trigger: AGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTTTAGAAAACAGCATAGCAGAGACCTTAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | TTCTGGAGTTTCCCTACATCTCCTAACAAGTTGATGTaGGAGGGGCAGGGATACTTCCACTCTGCAGATAGA | + |
|
Preference number: 3 (lower is better) Translates to: FWSFPTSPNKLM*EGQGYFHSADR Trigger: TCTATCTGCAGAGTGGAAGTATCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGTAGGGAAACTCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CCA 72 bp | TCCAGCCAGGAAGCATCTCATTTTAACAGTCAAATGTaGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSQEASHFNSQM*AFGQIPGQVTS Trigger: TGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACATTTGACTGTTAAAATGAGATGCTTCCTGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR TCA 72 bp | TTGGTAGTAAACTGTCCCTTGAAGGACCTAACACAATaGCCAGATCCTCATTTGCTGTGCCCTTGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVVNCPLKDLTQ*PDPHLLCPCVL Trigger: CAGCACACAAGGGCACAGCAAATGAGGATCTGGTCATTGTGTTAGGTCCTTCAAGGGACAGTTTACTACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | ATCACATGTCTAGTGAAGGAGCTATTGGACACACTGTaGCCTCTCTTGACCTGTTTGTCAGCTGTTGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ITCLVKELLDTL*PLLTCLSAVGS Trigger: ACTACCAACAGCTGACAAACAGGTCAAGAGAGGGCACAGTGTGTCCAATAGCTCCTTCACTAGACATGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR GCA 72 bp | ATTTCTCTAGGTCCTTTTTGTGGAATAAAGTTGTTTTaGCTGCATGTTACTGTGCCATACACATGCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISLGPFCGIKLF*LHVTVPYTCLQ Trigger: CTGCAAGCATGTGTATGGCACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | AGCACCAGCTGCACGCCGGCCAACCCTCACTGCGGCTaGCTGCTGCCTCAGGACCGAGACCGGGGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: STSCTPANPHCG*LLPQDRDRGWI Trigger: AATCCAGCCCCGGTCTCGGTCCTGAGGCAGCAGCAAGCCGCAGTGAGGGTTGGCCGGCGTGCAGCTGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCCTGTCCCCACCCACCCCCGGTTCAGAGCATGTCTCAGGGTGTGATCGGCCAGGGCACCTGTaGTGCTACCTGCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPALSPPTPGSEHVSGCDRPGHL*CYLPGG Trigger: GCCTCCTGGCAGGTAGCACCACAGGTGCCCTGGCCG...ATCACACCCTGAGACATGCTCTGAACCGGGGGTGGGTGGGGACAGGGCAGGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCCTGTCCCCACCCACCCCCGGTTCAGAGCATGTCTCAGGGTGTGATTCTGCAGCCGGACCTTaGCGGTATCCAGAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPALSPPTPGSEHVSGCDSAAGP*RYPEGK Trigger: CTTTCCCTCTGGATACCGCCAAGGTCCGGCTGCAGA...ATCACACCCTGAGACATGCTCTGAACCGGGGGTGGGTGGGGACAGGGCAGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGCACGGTACTGGGCGCTaGCTGCGGTGCGCACTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGHGTGR*LRCALA Trigger: GGCTAGTGCGCACCGCAGCCAGCGCCCAGTACCGTG...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTACATGGTGTTCAGGAAAGGGTAGGAGGGACAAAGGCTGCAGTGTCCCCGGAGGCGGCTCCCGATaGCTGCATGCTCTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTWCSGKGRRDKGCSVPGGGSR*LHALSP Trigger: AGGGCTCAGAGCATGCAGGCATCGGGAGCCGCCTCC...GGGGACACTGCAGCCTTTGTCCCTCCTACCCTTTCCTGAACACCATGTAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCACATCCCTTTTTAAAGACACTGGGGTCCTCACCTGCCTGCCAAGGTCCAGGGCACCTGTGGTaGTACCTGCCAGGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSHPFLKTLGSSPACQGPGHLW*YLPGGG Trigger: GCCGCCTCCTGGCAGGTAGCACCACAGGTGCCCTGG...ACCTTGGCAGGCAGGTGAGGACCCCAGTGTCTTTAAAAAGGGATGTGACCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAAAAGCTCATCTGGCGCTaGAGGCCGGCGACCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGREDILLSGPSFTAARQKLIWR*RPATSP Trigger: TGGGCTGGTCGCCGGCCTGCAGCGCCAGATGAGCTT...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGTCTGGAGGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAACCTGTGGTGCTACCTaGCAGGAGGCGGCTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGGTDWKTLQPLSDVTTCGAT*QEAAPD Trigger: ATCGGGAGCCGCCTCCTGGCAGGTAGCACCACAGGT...TGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCCTCCAGACCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | GGAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGTGCGCACTAGCCCTTaGCTCTCCCCTTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTDWKTLQPLSDVTGRMWVRTSP*LSPWIC Trigger: GCAGATCCAAGGGGAGAGTCAAGGGCTAGTGCGCAC...CCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGTTTTCTAAAGACTGCTGCCCCTTCCTCAGGCCAACTGACAGCATTCCTCCACCAGCCCGGGCCTaGGCCTGGAAGCGGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLFSKDCCPFLRPTDSIPPPARA*AWKRTF Trigger: AAAGGTCCGCTTCCAGGCTCAGGCCCGGGCTGGTGG...AGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTTTAGAAAACAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | GCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTaGCCTTGGCGTTCGATGGTGACCCGTAGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ARQSPKDPALCV*PWRSMVTRRRC Trigger: ACATCTCCTACGGGTCACCATCGAACGCCAAGGCAAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCAGATCCTCATTTGCTGTGCCCTTGTGTGCTGAAGCACCAGCTGCACGCCCCCGAAGGCAGAAGTaGAGTGGCAAGGGAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MTRSSFAVPLCAEAPAARPRRQK*SGKGGH Trigger: ATGACCTCCCTTGCCACTTCACTTCTGCCTTCGGGG...GCGTGCAGCTGGTGCTTCAGCACACAAGGGCACAGCAAATGAGGATCTGGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| CDS-3UTR GCA 90 bp | GCCCAGTTTCACAGCTGCCAGACAATCCCCCAAGGACCCAGCACTGTGTGTCTTAGTCGTAGAGGCCAATaGGGACGGAGGCAAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQFHSCQTIPQGPSTVCLSRRGQ*GRRQSS Trigger: TGAGCTTTGCCTCCGTCCGCATTGGCCTCTACGACT...AAGACACACAGTGCTGGGTCCTTGGGGGATTGTCTGGCAGCTGTGAAACTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | ACTAGGACTTCTGTCCTGGAGGGCTCTGTGGGAAGCTaGGCCTCAGGCCTCCACCATGCCCTTTATGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TRTSVLEGSVGS*ASGLHHALYEI Trigger: GATCTCATAAAGGGCATGGTGGAGGCCTGAGGCCAAGCTTCCCACAGAGCCCTCCAGGACAGAAGTCCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATGAAGATGTGGGCTTAGCTGTAGAAAGGGCTGAGGGCTCAGGGTCTGGTATGGTAAGGGCACAGTaGCCTGCGCTGTGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDEDVGLAVERAEGSGSGMVRAQ*PALWYW Trigger: CCAGTACCACAGCGCAGGTCACTGTGCCCTTACCAT...ACCAGACCCTGAGCCCTCAGCCCTTTCTACAGCTAAGCCCACATCTTCATCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGCTTCACAGTGGCTGTTaGGGGCACATCTGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGLHSGC*GHICGL Trigger: AAGGCCACAGATGTGCCCCCAACAGCCACTGTGAAG...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGGCTTCGACAGTGCTCTaGTATCTCCGACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGASTVL*YLRPPP Trigger: TGGTGGTGGTCGGAGATACCAGAGCACTGTCGAAGC...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGTAGGAGGGACAAAGGCTGCAGTGTCCCCTGGCTGTGCCACTGATCTCCTTCCTCTCGTGCAATaGTCTTGTAGGCTTCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ERVGGTKAAVSPGCATDLLPLVQ*SCRLRQ Trigger: CTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAG...GAGATCAGTGGCACAGCCAGGGGACACTGCAGCCTTTGTCCCTCCTACCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | GGGCCCTGGGTCTGGAACCTAGGACCTTTGCCAGAGTaGCTAGTGTTCTTGACTGCCAAGCCATCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPWVWNLGPLPE*LVFLTAKPSFQ Trigger: CTGGAAAGATGGCTTGGCAGTCAAGAACACTAGCAACTCTGGCAAAGGTCCTAGGTTCCAGACCCAGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGCCAGCTCAGCACAGTTaGCAATGGCATTACGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGPAQHS*QWHYGQ Trigger: TTGCCCGTAATGCCATTGTCAACTGTGCTGAGCTGG...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGGGAGGTCATCTGTCATaGGGTTGGCTTTCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGGGHLS*GWLSGE Trigger: CTCTCCTGAAAGCCAACCTCATGACAGATGACCTCC...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAACCAGGAACTTCACAGTaGCTGTTGGGGGCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGREDILLSGPSFTAARQPGTSQ*LLGAHL Trigger: CAGATGTGCCCCCAACAGCCACTGTGAAGTTCCTGG...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGACTGGAAGACCCTCCAGCCCCTCTCAGATGTTACAGGCAGAATGTGGGCCTCAGTGCGCACCATaGTTAGGATGGTACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQTGRPSSPSQMLQAECGPQCAP*LGWYPE Trigger: TTCTGGGTACCATCCTAACCATGGTGCGCACTGAGG...CCCACATTCTGCCTGTAACATCTGAGAGGGGCTGGAGGGTCTTCCAGTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | GCAGAAGCCATCACTTTAGGCCGAGAGGACATCCTATaGTCTGGGCCCAGTTTCACAGCTGCCAGACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AEAITLGREDIL*SGPSFTAARQS Trigger: GGATTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAAAGTGATGGCTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTTGCGTGGACCCTCAGTaGGCACCATGGTTAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFCVDPQ*APWLGW Trigger: CCATCCTAACCATGGTGCGCACTGAGGGTCCACGCA...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTCACATCCCTTTTTAAAGACACTGGGGTCCTCACCTGCCTGCCAAGGTTGTAGGCTTCGACAGTaGTCTGGTATCTCCGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CGSHPFLKTLGSSPACQGCRLRQ*SGISDH Trigger: GTGGTCGGAGATACCAGAGCACTGTCGAAGCCTACA...ACCTTGGCAGGCAGGTGAGGACCCCAGTGTCTTTAAAAAGGGATGTGACCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | TGGAACCTAGGACCTTTGCCAGAGTTGCTAGTGTTCTaGACTGCCAAGCCATCTTTCCAGCCCTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: WNLGPLPELLVF*TAKPSFQPSGS Trigger: GGATCCTGAGGGCTGGAAAGATGGCTTGGCAGTCAAGAACACTAGCAACTCTGGCAAAGGTCCTAGGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATGAAGATGTGGGCTTAGCTGTAGAAAGGGCTGAGGGCTCAGGGTCTGGTTCATGTATCTCGTCTTaGCCACATCAACAGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDEDVGLAVERAEGSGSGSCISS*PHQQGR Trigger: CCTCCCCTGTTGATGTGGTCAAGACGAGATACATGA...ACCAGACCCTGAGCCCTCAGCCCTTTCTACAGCTAAGCCCACATCTTCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTGCTGCCCCTTCCTCAGGCCAACTGACAGCATTCCTAGTCATGGAGTCTGAAAGTGATGAGATCTaGAATGCAGGCAGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTAAPSSGQLTAFLVMESESDEI*NAGSCP Trigger: GGGACAGCTGCCTGCATTGCAGATCTCATCACTTTC...AGACTCCATGACTAGGAATGCTGTCAGTTGGCCTGAGGAAGGGGCAGCAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAAGATCCCTTCCTCTCGTaGAATGGTCTTGTAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGREDILLSGPSFTAARQDPFLS*NGLVGF Trigger: GAAGCCTACAAGACCATTGCACGAGAGGAAGGGATC...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGCCTTCGGTCAGATTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTATTGTAGAGGCTGCGTaGACCCTCAGTGCGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGPSVRFLGKSLHFSRSFIVEAA*TLSAHH Trigger: ATGGTGCGCACTGAGGGTCCACGCAGCCTCTACAAT...AAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAATCTGACCGAAGGCCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTGGGCTGCCTTAGAACCTGCGCTGTGGTACTaGCCCAAGGCAGAGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LYEIPVTSKAASNWAALEPALWY*PKAEFM Trigger: CATGAACTCTGCCTTGGGCCAGTACCACAGCGCAGG...TTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | GGAAGGTTCTGGAGTTTCCCTACATCTCCTAACAAGTaGATGTGGGAGGGGCAGGGATACTTCCACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRFWSFPTSPNK*MWEGQGYFHSA Trigger: TGCAGAGTGGAAGTATCCCTGCCCCTCCCACATCAACTTGTTAGGAGATGTAGGGAAACTCCAGAACCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | CGAGTTCCAGGCCAGTGTGCTAGTGTGAAGCCCCGTTaGAAACAACAACAACACCCCTACAGGCTAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVPGQCASVKPR*KQQQHPYRLDL Trigger: AAGATCTAGCCTGTAGGGGTGTTGTTGTTGTTTCAAACGGGGCTTCACACTAGCACACTGGCCTGGAACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | AGAGGTCGGGTGCTACAGGTGGCTGTAATCCCAGCCTaGAGAAACTCAGGCAGAATTGTCATGAGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGRVLQVAVIPA*RNSGRIVMSSR Trigger: TCTAGAACTCATGACAATTCTGCCTGAGTTTCTCAAGGCTGGGATTACAGCCACCTGTAGCACCCGACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | GCAAAGCAGGGCGTCTGGTGCATCCCTCTGGAAGCATaGCTAAGGTCTCTGCTATGCTGTTTTCTAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVWCIPLEA*LRSLLCCFLKT Trigger: AGTCTTTAGAAAACAGCATAGCAGAGACCTTAGCAATGCTTCCAGAGGGATGCACCAGACGCCCTGCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CAA 72 bp | CTTGTCTTCTGTAGGTCTATGGCCTCAGGAGGTGGGTaGCTATGTGTAAAACAGAGTAAAGTAAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVFCRSMASGGG*LCVKQSKVSSP Trigger: GGGGGAGCTTACTTTACTCTGTTTTACACATAGCAACCCACCTCCTGAGGCCATAGACCTACAGAAGACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| CDS-3UTR TCA 90 bp | CTTTATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTGGGCTGCCTTAGAATGGTGTAGAACTGTTTaGCAGAGTCGTAGAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYEIPVTSKAASNWAALEWCRTV*QSRRGQ Trigger: TTGGCCTCTACGACTCTGTCAAACAGTTCTACACCA...TTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| CDS-3UTR CCA 90 bp | TGCCAGGCTCTAGTTTTTACAGCAAAGACTTCAACCCCTTCATTACAGACCTGTAAGGCAGAAGTGAAGTaGCAAGGGAGGTCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CQALVFTAKTSTPSLQTCKAEVK*QGRSSV Trigger: GACAGATGACCTCCCTTGCCACTTCACTTCTGCCTT...ACAGGTCTGTAATGAAGGGGTTGAAGTCTTTGCTGTAAAAACTAGAGCCTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
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| 3UTR CAA 72 bp | CACTTCATTTCTCTAGGTCCTTTTTGTGGAATAAAGTaGTTTTGCCTGCATGTTACTGTGCCATACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: HFISLGPFCGIK*FCLHVTVPYTC Trigger: GCATGTGTATGGCACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAATGAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| 3UTR CAA 72 bp | TTCCTGGGCAAGTCACTTCATTTCTCTAGGTCCTTTTaGTGGAATAAAGTTGTTTTGCCTGCATGTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGKSLHFSRSF*WNKVVLPACYC Trigger: ACAGTAACATGCAGGCAAAACAACTTTATTCCACAAAAAGGACCTAGAGAAATGAAGTGACTTGCCCAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS TCA 90 bp | AGAACGCCACGGTACTGGGCGCTGGCTGCGGTGCGCACTAGCCCTTaGCTCTCCCCTTGGATCTGCAGCCGGACCTTGGCGGTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTPRYWALAAVRTSP*LSPWICSRTLAVSR Trigger: TCTGGATACCGCCAAGGTCCGGCTGCAGATCCAAGGGGAGAGTCAAGGGCTAGTGCGCACCGCAGCCAGCGCCCAGTACCGTGGCGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000126534.8 ENSMUST00000129324.8 ENSMUST00000133044.3 ENSMUST00000153287.8 ENSMUST00000207748.2 |
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| CDS GCA 90 bp | CCCGGATCCCTTCCTCTCGTGCAATGGTCTTGTAGGCTTCGACAGTaGTCTGGTATCTCCGACCACCACCAGCCCGGGCCTGAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGSLPLVQWSCRLRQ*SGISDHHQPGPEPG Trigger: TCCAGGCTCAGGCCCGGGCTGGTGGTGGTCGGAGATACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAGGGATCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
||
| CDS GCA 90 bp | GGCGCGGGGTCCCTCCTTCCGGAGCATGGTAAGGGCACAGTGACCTaGGCTGTGGTACTGGCCCAAGGCAGAGTTCATGTATCTCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GAGSLLPEHGKGTVT*AVVLAQGRVHVSRL Trigger: AAGACGAGATACATGAACTCTGCCTTGGGCCAGTACCACAGCGCAGGTCACTGTGCCCTTACCATGCTCCGGAAGGAGGGACCCCGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
||
| CDS CCA 90 bp | GAGAAGTCCCTTTCCAGAGGCCCCGGATCCCTTCCTCTCGTGCAATaGTCTTGTAGGCTTCGACAGTGCTCTGGTATCTCCGACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: EKSLSRGPGSLPLVQ*SCRLRQCSGISDHH Trigger: GTGGTGGTCGGAGATACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAGGGATCCGGGGCCTCTGGAAAGGGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
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| CDS TCA 90 bp | GGCTCCCGATGCCTGCATGCTCTGAGCCCTTGGTGTAGAACTGTTTaGCAGAGTCGTAGAGGCCAATGCGGACGGAGGCAAAGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRCLHALSPWCRTV*QSRRGQCGRRQSSS Trigger: AGATGAGCTTTGCCTCCGTCCGCATTGGCCTCTACGACTCTGTCAAACAGTTCTACACCAAGGGCTCAGAGCATGCAGGCATCGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126534.8 ENSMUST00000133044.3 ENSMUST00000207748.2 |
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| CDS GCA 90 bp | ATTGGGAGAAGTCCCTTTCCAGAGGCCCCGGATCCCTTCCTCTCGTaGAATGGTCTTGTAGGCTTCGACAGTGCTCTGGTATCTCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: IGRSPFPEAPDPFLS*NGLVGFDSALVSPT Trigger: GGTCGGAGATACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAGGGATCCGGGGCCTCTGGAAAGGGACTTCTCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGCCGAGAGGACATCCTATTGTCTGGGCCCAGTTTCACAGCTGCCAGACAAACTTCACAGTGGCTGTaGGGGGCACATCTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGREDILLSGPSFTAARQTSQWL*GAHLWP Trigger: AGGCCACAGATGTGCCCCCAACAGCCACTGTGAAGT...TTGTCTGGCAGCTGTGAAACTGGGCCCAGACAATAGGATGTCCTCTCGGCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATGAGATCCCTGTAACTTCTAAGGCAGCCAGTAACTGGGCTGCCTTAGAATCATCTGTCATGAGGTaGGCTTTCAGGAGAGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LYEIPVTSKAASNWAALESSVMR*AFRRVS Trigger: AGATACTCTCCTGAAAGCCAACCTCATGACAGATGA...TTCTAAGGCAGCCCAGTTACTGGCTGCCTTAGAAGTTACAGGGATCTCATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGCTCTAGTTTTTACAGCAAAGACTTCAACCCCTTCATTACAGACCTGTTTCATGTATCTCGTCTaGACCACATCAACAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CQALVFTAKTSTPSLQTCFMYLV*TTSTGE Trigger: CTCCCCTGTTGATGTGGTCAAGACGAGATACATGAA...ACAGGTCTGTAATGAAGGGGTTGAAGTCTTTGCTGTAAAAACTAGAGCCTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126534.8 |
||
| CDS TCA 72 bp | CGGTACTGGGCGCTGGCTGCGGTGCGCACTAGCCCTTaGCTCTCCCCTTGGATCTGCAGCCGGACCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RYWALAAVRTSP*LSPWICSRTLA Trigger: CGCCAAGGTCCGGCTGCAGATCCAAGGGGAGAGTCAAGGGCTAGTGCGCACCGCAGCCAGCGCCCAGTACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000126534.8 ENSMUST00000129324.8 ENSMUST00000133044.3 ENSMUST00000153287.8 ENSMUST00000207748.2 |
||
| CDS TCA 72 bp | CGGGGTCCCTCCTTCCGGAGCATGGTAAGGGCACAGTaGCCTGCGCTGTGGTACTGGCCCAAGGCAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGPSFRSMVRAQ*PALWYWPKAEF Trigger: GAACTCTGCCTTGGGCCAGTACCACAGCGCAGGTCACTGTGCCCTTACCATGCTCCGGAAGGAGGGACCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
||
| CDS GCA 72 bp | CTTCCTCTCGTGCAATGGTCTTGTAGGCTTCGACAGTaGTCTGGTATCTCCGACCACCACCAGCCCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPLVQWSCRLRQ*SGISDHHQPGP Trigger: AGGCCCGGGCTGGTGGTGGTCGGAGATACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126534.8 ENSMUST00000133044.3 ENSMUST00000207748.2 |
||
| CDS GCA 72 bp | TCCCTCCTTCCGGAGCATGGTAAGGGCACAGTGACCTaGGCTGTGGTACTGGCCCAAGGCAGAGTTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLPEHGKGTVT*AVVLAQGRVHV Trigger: TACATGAACTCTGCCTTGGGCCAGTACCACAGCGCAGGTCACTGTGCCCTTACCATGCTCCGGAAGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
||
| CDS GCA 72 bp | AGTCCCTTTCCAGAGGCCCCGGATCCCTTCCTCTCGTaGAATGGTCTTGTAGGCTTCGACAGTGCTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SPFPEAPDPFLS*NGLVGFDSALV Trigger: TACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAGGGATCCGGGGCCTCTGGAAAGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
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| CDS CCA 72 bp | CTTTCCAGAGGCCCCGGATCCCTTCCTCTCGTGCAATaGTCTTGTAGGCTTCGACAGTGCTCTGGTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSRGPGSLPLVQ*SCRLRQCSGIS Trigger: GGAGATACCAGAGCACTGTCGAAGCCTACAAGACCATTGCACGAGAGGAAGGGATCCGGGGCCTCTGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
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| CDS TCA 72 bp | TGCCTGCATGCTCTGAGCCCTTGGTGTAGAACTGTTTaGCAGAGTCGTAGAGGCCAATGCGGACGGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CLHALSPWCRTV*QSRRGQCGRRQ Trigger: TTGCCTCCGTCCGCATTGGCCTCTACGACTCTGTCAAACAGTTCTACACCAAGGGCTCAGAGCATGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126534.8 ENSMUST00000133044.3 ENSMUST00000207748.2 |
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| CDS CAA 72 bp | AGCTCAGCACAGTTGACAATGGCATTACGGGCAACATaGGGAGAAGTCCCTTTCCAGAGGCCCCGGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSAQLTMALRAT*GEVPFQRPRIP Trigger: AGGGATCCGGGGCCTCTGGAAAGGGACTTCTCCCAATGTTGCCCGTAATGCCATTGTCAACTGTGCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
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| CDS CAA 72 bp | TGGTACTGGCCCAAGGCAGAGTTCATGTATCTCGTCTaGACCACATCAACAGGGGAGGCGATGACGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: WYWPKAEFMYLV*TTSTGEAMTVV Trigger: CACCACCGTCATCGCCTCCCCTGTTGATGTGGTCAAGACGAGATACATGAACTCTGCCTTGGGCCAGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126534.8 ENSMUST00000207748.2 |
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