Pregenerated sensors for UCP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031710Ensembl transcript IDs: ENSMUST00000034146.5
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCTTTGATTTCTTTGGTTaGTTTTATTCGTGGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTFDFFG*FYSWSP Trigger: GGGAGACCACGAATAAAACCAACCAAAGAAATCAAA...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| 3UTR TCA 72 bp | AAAGGGTTTTGGACTAATTTTTCCTTCCCACTAGTTTaGGCTGTAATCAGAATTCTTTATACCCAGTCATAC | + |
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Preference number: 3 (lower is better) Translates to: KGFWTNFSFPLV*AVIRILYTQSY Trigger: GTATGACTGGGTATAAAGAATTCTGATTACAGCTCAAACTAGTGGGAAGGAAAAATTAGTCCAAAACCCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR TCA 90 bp | GTGGTCTCCCAGCATAGAAGCCCAATGATGTTCAGTATCTCTTCCTCCAAGTTGTTTTTGCCAGGGTGGTaGTGGTCCCTAGGACACCTT | + |
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Preference number: 4 (lower is better) Translates to: VVSQHRSPMMFSISSSKLFLPGW*WSLGHL Trigger: AAGGTGTCCTAGGGACCATCACCACCCTGGCAAAAA...CAACTTGGAGGAAGAGATACTGAACATCATTGGGCTTCTATGCTGGGAGACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR TCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCAAGCTGATTTGCCTCTaGATGCCCGCAGGCAGACCG | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTKLICL*MPAGRP Trigger: CGGTCTGCCTGCGGGCATTCAGAGGCAAATCAGCTT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR TCA 90 bp | GTGGTCTCCCAGCATAGAAGCCCAATGATGTTCAGTATCTCTTCCTCCAAGTTGGAGGCCAATCCTGAGTaGGGCAAAGCTGATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VVSQHRSPMMFSISSSKLEANPE*GKADLP Trigger: AGGCAAATCAGCTTTGCCTCACTCAGGATTGGCCTC...CAACTTGGAGGAAGAGATACTGAACATCATTGGGCTTCTATGCTGGGAGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR TCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCCAAGGGCCCCCTTCATaGGGTCATATGTTACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTQGPPS*GHMLPA Trigger: AGCTGGTAACATATGACCTCATGAAGGGGGCCCTTG...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR GCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCACGACCTCTGTAGGCTaGCCAATGAACACTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTTTSVG*PMNTAT Trigger: TGTGGCAGTGTTCATTGGGCAGCCTACAGAGGTCGT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR GCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCAGATGGCTCTGGGCTTaGATTCTGACCTTCACGACC | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTRWLWA*ILTFTT Trigger: GGTCGTGAAGGTCAGAATGCAAGCCCAGAGCCATCT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCCCATGCAGATGGCTCTaGGCTTGCATTCTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTPCRWL*ACILTF Trigger: GAAGGTCAGAATGCAAGCCCAGAGCCATCTGCATGG...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCAGAGCTGACAGTAAATaGCAGGGGACGTCATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTRADSK*QGTSSA Trigger: GGCAGATGACGTCCCCTGCCATTTACTGTCAGCTCT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR GCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCCAATCCTTCTGTTTTTaGCAGGGTGGTGATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTQSFCF*QGGDGP Trigger: GGGACCATCACCACCCTGGCAAAAACAGAAGGATTG...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCTTGATCCCATGCAGATaGCTCTGGGCTTGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTLIPCR*LWACIL Trigger: CAGAATGCAAGCCCAGAGCCATCTGCATGGGATCAA...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR TCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCAGGTGTTTCTCTCCCTaGAGAGAAGTACTCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTRCFSP*REVLLD Trigger: GTCCAAGAGTACTTCTCTTCAGGGAGAGAAACACCT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CCA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCAATCCACTGTCTGTCTaGACTTCATCAGCTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTNPLSV*TSSALF Trigger: AAAAAGAGCTGATGAAGTCCAGACAGACAGTGGATT...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS GCA 90 bp | AGATGGCTCTGGGCTTGCATTCTGACCTTCACGACCTCTGTAGGCTaGCCAATGAACACTGCCACACCTCCAGTCATTAAGCCGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RWLWACILTFTTSVG*PMNTATPPVIKPAE Trigger: CTCAGCCGGCTTAATGACTGGAGGTGTGGCAGTGTTCATTGGGCAGCCTACAGAGGTCGTGAAGGTCAGAATGCAAGCCCAGAGCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 90 bp | AAAGGCCGTCGGTCCTTCCTTGGTGTACATGGACATCGCACAGCTTaGTACGCTTGGGTACTGTCCTGGCAGAGAGTTGATGAATCTTGT | + |
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Preference number: 5 (lower is better) Translates to: KGRRSFLGVHGHRTA*YAWVLSWQRVDESC Trigger: ACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTCCATGTACACCAAGGAAGGACCGACGGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 90 bp | CGGTCCTTCCTTGGTGTACATGGACATCGCACAGCTTGGTACGCTTaGGTACTGTCCTGGCAGAGAGTTGATGAATCTTGTTTTTACCAC | + |
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Preference number: 5 (lower is better) Translates to: RSFLGVHGHRTAWYA*VLSWQRVDESCFYH Trigger: GTGGTAAAAACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTCCATGTACACCAAGGAAGGACCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 90 bp | GGTGTACATGGACATCGCACAGCTTGGTACGCTTGGGTACTGTCCTaGCAGAGAGTTGATGAATCTTGTTTTTACCACATCCACTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GVHGHRTAWYAWVLS*QRVDESCFYHIHWR Trigger: TCTCCAGTGGATGTGGTAAAAACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTCCATGTACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CAA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCCAGATGGCTCTGGGCTaGCATTCTGACCTTCACGAC | + |
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Preference number: 5 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTQMALG*HSDLHD Trigger: GTCGTGAAGGTCAGAATGCAAGCCCAGAGCCATCTG...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CAA 90 bp | GTGGTCTCCCAGCATAGAAGCCCAATGATGTTCAGTATCTCTTCCTCCAAGTTGTCATCTGCCAGTATTTaGTTGTTTACAAGGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: VVSQHRSPMMFSISSSKLSSASI*LFTRAP Trigger: GGGGGCCCTTGTAAACAACAAAATACTGGCAGATGA...CAACTTGGAGGAAGAGATACTGAACATCATTGGGCTTCTATGCTGGGAGACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CAA 90 bp | TGTAATCAGAATTCTTTATACCCAGTCATACACTCCCACCTCTCCCCAAAGACCTCCCTTTCCAAAGTGTaGACAAGCTTTCTGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CNQNSLYPVIHSHLSPKTSLSKV*TSFLWW Trigger: CCACCACAGAAAGCTTGTCAACACTTTGGAAAGGGA...GGTCTTTGGGGAGAGGTGGGAGTGTATGACTGGGTATAAAGAATTCTGATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS-3UTR CAA 90 bp | GTGGTCTCCCAGCATAGAAGCCCAATGATGTTCAGTATCTCTTCCTCCAAGTTGACCAGCTCTGTACAATaGATGATGACATTTCTCATT | + |
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Preference number: 5 (lower is better) Translates to: VVSQHRSPMMFSISSSKLTSSVQ*MMTFLI Trigger: AATGAGAAATGTCATCATCAATTGTACAGAGCTGGT...CAACTTGGAGGAAGAGATACTGAACATCATTGGGCTTCTATGCTGGGAGACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 90 bp | GGTCCCCGTGTAGCGGGGTTTGATCCCATGCAGATGGCTCTGGGCTaGCATTCTGACCTTCACGACCTCTGTAGGCTGCCCAATGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GPRVAGFDPMQMALG*HSDLHDLCRLPNEH Trigger: GTGTTCATTGGGCAGCCTACAGAGGTCGTGAAGGTCAGAATGCAAGCCCAGAGCCATCTGCATGGGATCAAACCCCGCTACACGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 72 bp | GTAGCGGGGTTTGATCCCATGCAGATGGCTCTGGGCTaGCATTCTGACCTTCACGACCTCTGTAGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VAGFDPMQMALG*HSDLHDLCRLP Trigger: GGGCAGCCTACAGAGGTCGTGAAGGTCAGAATGCAAGCCCAGAGCCATCTGCATGGGATCAAACCCCGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS TCA 72 bp | CTGCCAGGCAAGCTGAAACTCCGGCTGAGAAGATCTTaGCCCCCATGGTGGGTTGCACTTCGGAAGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LPGKLKLRLRRS*PPWWVALRKLS Trigger: CGACAACTTCCGAAGTGCAACCCACCATGGGGGTCAAGATCTTCTCAGCCGGAGTTTCAGCTTGCCTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS TCA 72 bp | CTAATGGTACTGGAAGCCTGGCCTTCACCTTGGATCTaGAGGCGGACTTTGGCAGTGTCCAGCGGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LMVLEAWPSPWI*RRTLAVSSGKV Trigger: CACCTTCCCGCTGGACACTGCCAAAGTCCGCCTTCAGATCCAAGGTGAAGGCCAGGCTTCCAGTACCATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 72 bp | TCTGCCAGGCAAGCTGAAACTCCGGCTGAGAAGATCTaGACCCCCATGGTGGGTTGCACTTCGGAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SARQAETPAEKI*TPMVGCTSEVV Trigger: GACAACTTCCGAAGTGCAACCCACCATGGGGGTCAAGATCTTCTCAGCCGGAGTTTCAGCTTGCCTGGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 90 bp | GTGATGATATCTGCCAGGCAAGCTGAAACTCCGGCTGAGAAGATCTaGACCCCCATGGTGGGTTGCACTTCGGAAGTTGTCGGGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: VMISARQAETPAEKI*TPMVGCTSEVVGFT Trigger: GGTGAACCCGACAACTTCCGAAGTGCAACCCACCATGGGGGTCAAGATCTTCTCAGCCGGAGTTTCAGCTTGCCTGGCAGATATCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 72 bp | CGGTCCTTCCTTGGTGTACATGGACATCGCACAGCTTaGTACGCTTGGGTACTGTCCTGGCAGAGAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RSFLGVHGHRTA*YAWVLSWQRVD Trigger: ATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTCCATGTACACCAAGGAAGGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS TCA 72 bp | AGGACCCGAGTCGCAGAAAAGAAGCCACAAACCCTTTaGAAAAGGCCGTCGGTCCTTCCTTGGTGTACATGG | + |
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Preference number: 6 (lower is better) Translates to: RTRVAEKKPQTL*KRPSVLPWCTW Trigger: CCATGTACACCAAGGAAGGACCGACGGCCTTTTTCAAAGGGTTTGTGGCTTCTTTTCTGCGACTCGGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS GCA 72 bp | TGGGCTTGCATTCTGACCTTCACGACCTCTGTAGGCTaGCCAATGAACACTGCCACACCTCCAGTCATTAAG | + |
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Preference number: 6 (lower is better) Translates to: WACILTFTTSVG*PMNTATPPVIK Trigger: CTTAATGACTGGAGGTGTGGCAGTGTTCATTGGGCAGCCTACAGAGGTCGTGAAGGTCAGAATGCAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 90 bp | ATGACGTTCCAGGACCCGAGTCGCAGAAAAGAAGCCACAAACCCTTaGAAAAAGGCCGTCGGTCCTTCCTTGGTGTACATGGACATCGCA | + |
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Preference number: 6 (lower is better) Translates to: MTFQDPSRRKEATNP*KKAVGPSLVYMDIA Trigger: TGCGATGTCCATGTACACCAAGGAAGGACCGACGGCCTTTTTCAAAGGGTTTGTGGCTTCTTTTCTGCGACTCGGGTCCTGGAACGTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 90 bp | GACATCGCACAGCTTGGTACGCTTGGGTACTGTCCTGGCAGAGAGTaGATGAATCTTGTTTTTACCACATCCACTGGAGAGGCCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: DIAQLGTLGYCPGRE*MNLVFTTSTGEARS Trigger: ACTCCTGGCCTCTCCAGTGGATGTGGTAAAAACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS GCA 72 bp | TTTTTACCACATCCACTGGAGAGGCCAGGAGTGTGGTaGAAAACCCGGCAACAAGAGCTGACAGTAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: FLPHPLERPGVW*KTRQQELTVNG Trigger: GCCATTTACTGTCAGCTCTTGTTGCCGGGTTTTGCACCACACTCCTGGCCTCTCCAGTGGATGTGGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 72 bp | CAGAGAGTTGATGAATCTTGTTTTTACCACATCCACTaGAGAGGCCAGGAGTGTGGTGCAAAACCCGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: QRVDESCFYHIH*RGQECGAKPGN Trigger: GTTGCCGGGTTTTGCACCACACTCCTGGCCTCTCCAGTGGATGTGGTAAAAACAAGATTCATCAACTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CCA 72 bp | CTTGGTGTACATGGACATCGCACAGCTTGGTACGCTTaGGTACTGTCCTGGCAGAGAGTTGATGAATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LGVHGHRTAWYA*VLSWQRVDESC Trigger: ACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTCCATGTACACCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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| CDS CAA 72 bp | CAGCTTGGTACGCTTGGGTACTGTCCTGGCAGAGAGTaGATGAATCTTGTTTTTACCACATCCACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QLGTLGYCPGRE*MNLVFTTSTGE Trigger: CTCTCCAGTGGATGTGGTAAAAACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034146.5 |
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