Pregenerated sensors for UCKL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089917Ensembl transcript IDs: ENSMUST00000057816.15, ENSMUST00000129469.8, ENSMUST00000134340.8, ENSMUST00000136875.2, ENSMUST00000144856.8, ENSMUST00000154613.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCACGCAGAATTaGCACGCCGGTGATCTGTTTTCCAGCGTAGCACTTTCCCACGTA | + |
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Preference number: 1 (lower is better) Translates to: HGTQCRLHGFSCTQN*HAGDLFSSVALSHV Trigger: TACGTGGGAAAGTGCTACGCTGGAAAACAGATCACCGGCGTGTCAATTCTGCGTGCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR TCA 90 bp | CGCGTGGGAAAGCGTAGGCCACAGAATGCACACCCATCTCTGCCATaGGCAGGGACAGCAAAAAGATCTTGTCCTCAGGCACATCATGGT | + |
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Preference number: 1 (lower is better) Translates to: RVGKRRPQNAHPSLP*AGTAKRSCPQAHHG Trigger: ACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTCTGTGGCCTACGCTTTCCCACGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR GCA 90 bp | TCTCACGCGTGGGAAAGCGTAGGCCACAGAATGCACACCCATCTCTaGCATGAGCAGGGACAGCAAAAAGATCTTGTCCTCAGGCACATC | + |
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Preference number: 1 (lower is better) Translates to: SHAWESVGHRMHTHL*HEQGQQKDLVLRHI Trigger: GATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTCTGTGGCCTACGCTTTCCCACGCGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CCA 90 bp | GTCATTGACACGCTTGTCCACAGCTGTGGTGATGATTCTCACGCGTaGGAAAGCGTAGGCCACAGAATGCACACCCATCTCTGCCATGAG | + |
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Preference number: 1 (lower is better) Translates to: VIDTLVHSCGDDSHA*ESVGHRMHTHLCHE Trigger: CTCATGGCAGAGATGGGTGTGCATTCTGTGGCCTACGCTTTCCCACGCGTGAGAATCATCACCACAGCTGTGGACAAGCGTGTCAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR TCA 90 bp | CACCTGTGGATACTGTGCAGTCCATCAGGATCACATGGTCATCACTaGTATCCTTGGGAAGCCTCAGGTAATGGAGCTCAGGCTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: HLWILCSPSGSHGHH*YPWEASGNGAQAPL Trigger: CAGGGGAGCCTGAGCTCCATTACCTGAGGCTTCCCAAGGATATCAGTGATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR GCA 90 bp | CTCGGACAGGGAACTAACCCACAGTGGCTGCCTCATCATCATCACTaGCATCAGGGACTGCATCTGTCCCAAAGTAGCGATCACCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: LGQGTNPQWLPHHHH*HQGLHLSQSSDHQS Trigger: ACTTTGGTGATCGCTACTTTGGGACAGATGCAGTCCCTGATGGCAGTGATGATGATGAGGCAGCCACTGTGGGTTAGTTCCCTGTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR GCA 90 bp | GGTAGAAATAAGAGTAGCTCGGACAGGGAACTAACCCACAGTGGCTaGCTCATCATCATCACTGCCATCAGGGACTGCATCTGTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: GRNKSSSDRELTHSG*LIIITAIRDCICPK Trigger: TTTGGGACAGATGCAGTCCCTGATGGCAGTGATGATGATGAGGCAGCCACTGTGGGTTAGTTCCCTGTCCGAGCTACTCTTATTTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CAA 90 bp | GTGAGCTGGTTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTaGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCACGC | + |
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Preference number: 2 (lower is better) Translates to: VSWLVWMRIVPMRTS*HTARSAGSMVSPAR Trigger: GCGTGCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAACCAGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR-3UTR TCA 90 bp | CACATCCTTGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCACGCAGTGTACAGTGCAGTCCTaGAAGGGTAGGAAGGACAGT | + |
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Preference number: 2 (lower is better) Translates to: HILAHGTQCRLHGFSCTQCTVQS*KGRKDS Trigger: ACTGTCCTTCCTACCCTTTCAGGACTGCACTGTACA...CTGCGTGCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGCAGCACCTGTGGATACTGTGCAGTCCATCAGGATCACATGGTCATCACTGTGCCCCTGTGGAGTCTaGAAGGGTAGGAAGGACAGT | + |
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Preference number: 2 (lower is better) Translates to: AAAPVDTVQSIRITWSSLCPCGV*KGRKDS Trigger: ACTGTCCTTCCTACCCTTTCAGACTCCACAGGGGCA...CAGTGATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154613.8 |
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| 3UTR-3UTR CCA 90 bp | GATGCGCACATCCTTGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCCAGAAGACAGAAGGCTaGGTAGAAATAAGAGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DAHILAHGTQCRLHGFSCQKTEG*VEIRVA Trigger: AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTG...GCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTTGTCCACAGCTGTGGTGGTAGTCCTGCCCCTGTaGAGTCTGTACAGTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: MPGMIRKRSLTRLSTAVVVVLPL*SLYSAV Trigger: GACTGCACTGTACAGACTCCACAGGGGCAGGACTAC...CACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CAA 90 bp | GAATGCACACCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGGTCCAGGAGTACACGTACAGCCATC | + |
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Preference number: 2 (lower is better) Translates to: ECTPISAMSRDSKKI*SSGTSWSRSTRTAI Trigger: GATGGCTGTACGTGTACTCCTGGACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CAA 90 bp | CGATCACCAAAGTTCCCAATGCCTGGGATGATACGGAAAAGGTCATaGACACGCTTGTCCACAGCTGTGGTGATGATTCTCACGCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RSPKFPMPGMIRKRS*TRLSTAVVMILTRG Trigger: CCCACGCGTGAGAATCATCACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCATTGGGAACTTTGGTGATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR-3UTR CCA 90 bp | AATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTTGTCCACAGCTGTGGTGGCTCCCCTGTGAGCTaGTTGGTCTGGATGAGGATA | + |
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Preference number: 2 (lower is better) Translates to: NAWDDTEKVIDTLVHSCGGSPVS*LVWMRI Trigger: TATCCTCATCCAGACCAACCAGCTCACAGGGGAGCC...ACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGAGTACACGTACAGCCATCATGGCCGCAGCACCTGTGGATACTGTGCAGTCCCCTGTGAGCTGGTaGGTCTGGATGAGGATAGTG | + |
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Preference number: 3 (lower is better) Translates to: SRSTRTAIMAAAPVDTVQSPVSW*VWMRIV Trigger: CACTATCCTCATCCAGACCAACCAGCTCACAGGGGA...CTGCACAGTATCCACAGGTGCTGCGGCCATGATGGCTGTACGTGTACTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR CCA 72 bp | ACGCTTGTCCACAGCTGTGGTGATGATTCTCACGCGTaGGAAAGCGTAGGCCACAGAATGCACACCCATCTC | + |
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Preference number: 3 (lower is better) Translates to: TLVHSCGDDSHA*ESVGHRMHTHL Trigger: GAGATGGGTGTGCATTCTGTGGCCTACGCTTTCCCACGCGTGAGAATCATCACCACAGCTGTGGACAAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR TCA 72 bp | CAGTGCAGGCTCCATGGTTTCTCCTGCACGCAGAATTaGCACGCCGGTGATCTGTTTTCCAGCGTAGCACTT | + |
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Preference number: 3 (lower is better) Translates to: QCRLHGFSCTQN*HAGDLFSSVAL Trigger: AAGTGCTACGCTGGAAAACAGATCACCGGCGTGTCAATTCTGCGTGCAGGAGAAACCATGGAGCCTGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR GCA 72 bp | TTCCCACGTAGTCCTGCCCCTGTGGAGTCTGTACAGTaGAGTCCTGAAAGGGTAGGAAGGACAGTGCATGTT | + |
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Preference number: 3 (lower is better) Translates to: FPRSPAPVESVQ*SPERVGRTVHV Trigger: AACATGCACTGTCCTTCCTACCCTTTCAGGACTGCACTGTACAGACTCCACAGGGGCAGGACTACGTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CCA 72 bp | GGAGTACACGTACAGCCATCATGGCCGCAGCACCTGTaGATACTGTGCAGTCCATCAGGATCACATGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: GVHVQPSWPQHL*ILCSPSGSHGH Trigger: ATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGCCATGATGGCTGTACGTGTACTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR TCA 72 bp | CCATGGTTTCTCCTGCACGCAGAATTGACACGCCGGTaGTCTGTTTTCCAGCGTAGCACTTTCCCACGTAGT | + |
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Preference number: 3 (lower is better) Translates to: PWFLLHAELTRR*SVFQRSTFPRS Trigger: ACTACGTGGGAAAGTGCTACGCTGGAAAACAGATCACCGGCGTGTCAATTCTGCGTGCAGGAGAAACCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| 3UTR GCA 72 bp | TGGGAAAGCGTAGGCCACAGAATGCACACCCATCTCTaGCATGAGCAGGGACAGCAAAAAGATCTTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: WESVGHRMHTHL*HEQGQQKDLVL Trigger: GAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTCTGTGGCCTACGCTTTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR GCA 72 bp | GGAACTAACCCACAGTGGCTGCCTCATCATCATCACTaGCATCAGGGACTGCATCTGTCCCAAAGTAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: GTNPQWLPHHHH*HQGLHLSQSSD Trigger: ATCGCTACTTTGGGACAGATGCAGTCCCTGATGGCAGTGATGATGATGAGGCAGCCACTGTGGGTTAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR TCA 72 bp | ATACTGTGCAGTCCATCAGGATCACATGGTCATCACTaGTATCCTTGGGAAGCCTCAGGTAATGGAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ILCSPSGSHGHH*YPWEASGNGAQ Trigger: CTGAGCTCCATTACCTGAGGCTTCCCAAGGATATCAGTGATGACCATGTGATCCTGATGGACTGCACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGATAGTGCCGATGCGCACATCCTTGCACACGGCACGCAGTGCAGGCTCGCGGCCAGGCACGTCTaGGGCCACAGCAGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DEDSADAHILAHGTQCRLAARHV*GHSRLQ Trigger: CTGCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGC...GAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCACTATCCTCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR TCA 90 bp | GCCGCAGCACCTGTGGATACTGTGCAGTCCATCAGGATCACATGGTCATCACTGGGTGCGCTTCCGGGGTaGGCGCCCAGTACCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: AAAPVDTVQSIRITWSSLGALPG*APSTHW Trigger: CCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACC...CAGTGATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR CCA 90 bp | GTGCCGATGCGCACATCCTTGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTAGGACACTCAGTGTCTaGGGGAGGGGATGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: VPMRTSLHTARSAGSMVSRTLSV*GRGWHW Trigger: CCAGTGCCATCCCCTCCCCCAGACACTGAGTGTCCT...AGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACCTGTGGATACTGTGCAGTCCATCAGGATCACATGGTCATCACTGACTTGCACTGGCTGGTaGTGCGCTTCCGGGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: AAAPVDTVQSIRITWSSLTCTGW*CASGVS Trigger: GCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGT...CAGTGATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR CCA 90 bp | TCCCCTGTGAGCTGGTTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTTGGGTTCTGACTTGCACTaGCTGGTGGTGCGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SPVSWLVWMRIVPMRTSLGSDLH*LVVRFR Trigger: CCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACC...CAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAACCAGCTCACAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGGGTGCGCTTCCGGGGTaGGCGCCCAGTACCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRGALPG*APSTHW Trigger: CCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACC...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS-3UTR GCA 90 bp | CTGGATGAGGATAGTGCCGATGCGCACATCCTTGCACACGGCACGCAGTGCAGGTGGTACGTTTGCTTGTaGGAAGCAGGGGTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LDEDSADAHILAHGTQCRWYVCL*EAGVVL Trigger: CAGAACCACCCCTGCTTCGCACAAGCAAACGTACCA...CCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCACTATCCTCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGAGCTGGTTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTTGCACTCCCTGATGATGGTGTaGATGCCTCGGACCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PVSWLVWMRIVPMRTSLHSLMMV*MPRTCG Trigger: ACCGCAGGTCCGAGGCATGCACACCATCATCAGGGA...GTGCAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAACCAGCTCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR GCA 90 bp | CCACGTAGTCCTGCCCCTGTGGAGTCTGAAAGGGTAGGAAGGACAGTGCATGTTTCCCTGATGATGGTGTaGATGCCTCGGACCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRSPAPVESERVGRTVHVSLMMV*MPRTCG Trigger: ACCGCAGGTCCGAGGCATGCACACCATCATCAGGGA...AACATGCACTGTCCTTCCTACCCTTTCAGACTCCACAGGGGCAGGACTACGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154613.8 |
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| CDS-3UTR CCA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGGCGGCCAGGCACGTCTaGGGCCACAGCAGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRAARHV*GHSRLQ Trigger: CTGCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGC...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| 3UTR CAA 72 bp | TTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTaGCACACGGCACGCAGTGCAGGCTCCATGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVWMRIVPMRTS*HTARSAGSMVS Trigger: AGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTACACGTACAGCCATCATGGCCGCAGCACCTGTGGATACTGTGCAGTCCTCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: RSTRTAIMAAAPVDTVQSSSSWL*TCCTIR Trigger: CCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGA...GGACTGCACAGTATCCACAGGTGCTGCGGCCATGATGGCTGTACGTGTACTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR CCA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGCTGACTTGCACTGGCTaGTGGTGCGCTTCCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PAIPDQKTEGWVEIRVARLTCTG*WCASGV Trigger: CACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAG...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS-3UTR CCA 90 bp | TCCCCTGTGAGCTGGTTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTTGGCACAATCAGGTCAATaGCTACTGTGTTCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPVSWLVWMRIVPMRTSLAQSGQ*LLCSRS Trigger: GGAGCGGGAACACAGTAGCCATTGACCTGATTGTGC...CAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAACCAGCTCACAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR TCA 90 bp | ACGTACAGCCATCATGGCCGCAGCACCTGTGGATACTGTGCAGTCCATCAGGATTCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: TYSHHGRSTCGYCAVHQDSSSWL*TCCTIR Trigger: CCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGA...ATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGCCATGATGGCTGTACGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS-3UTR CCA 90 bp | TCCTTGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCACGCAGAATTATGTTCATTGTACCATaGTGGCCGCCCAGCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLHTARSAGSMVSPARRIMFIVP*WPPSCV Trigger: TACACAGCTGGGCGGCCACCATGGTACAATGAACAT...AATTCTGCGTGCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR GCA 90 bp | ATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTTGTCCACAGCTGTGGTGGCAGCCTGTTCCTGCTaGTGCTGCGTCAGAACCTTA | + |
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Preference number: 4 (lower is better) Translates to: MPGMIRKRSLTRLSTAVVAACSC*CCVRTL Trigger: TAAGGTTCTGACGCAGCAGCAGCAGGAACAGGCTGC...CACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACCTGTGGATACTGTGCAGTCCATCAGGATCACATGGTCATCACTGTTCATTGTACCATGGTaGCCGCCCAGCTGTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: AAAPVDTVQSIRITWSSLFIVPW*PPSCVD Trigger: ATCTACACAGCTGGGCGGCCACCATGGTACAATGAA...CAGTGATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CAA 72 bp | CCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGGTCCAGGAGTACACGT | + |
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Preference number: 4 (lower is better) Translates to: PISAMSRDSKKI*SSGTSWSRSTR Trigger: ACGTGTACTCCTGGACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| 3UTR CAA 72 bp | ATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTaGTCCACAGCTGTGGTGATGATTCTCACGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MPGMIRKRSLTR*STAVVMILTRG Trigger: CCCACGCGTGAGAATCATCACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
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| CDS-3UTR TCA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGAAGCAGGGGTGGTTCTaGCTTGCACTGGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRKQGWF*LALAGG Trigger: ACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTT...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS-3UTR GCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGGGGTGGTTCTGACTTaGACTGGCTGGTGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVGVVLT*TGWWCA Trigger: AGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCC...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATACTTGCACTGGCTGGTaGTGCGCTTCCGGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNTCTGW*CASGVS Trigger: GCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGT...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGGTTCTGACTTGCACTaGCTGGTGGTGCGCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVGSDLH*LVVRFR Trigger: CCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACC...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAAGGACACTCAGTGTCTaGGGGAGGGGATGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRRTLSV*GRGWHW Trigger: CCAGTGCCATCCCCTCCCCCAGACACTGAGTGTCCT...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAAAGCAGGGGTGGTTCTaGCTTGCACTGGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRKQGWF*LALAGG Trigger: ACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTT...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTGGGGTGGTTCTGACTTaGACTGGCTGGTGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGGVVLT*TGWWCA Trigger: AGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCC...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTGCAGCCTGTTCCTGCTaGTGCTGCGTCAGAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VPAIPDQKTEGWVEIRVAAACSC*CCVRTL Trigger: TAAGGTTCTGACGCAGCAGCAGCAGGAACAGGCTGC...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | GCACATCCTTGCACACGGCACGCAGTGCAGGCTCCATGGTTTCTCCTGCACGCAACAAACTTGTTGTACTaGTTAATGACACCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AHPCTRHAVQAPWFLLHATNLLY*LMTPSM Trigger: CATTGAGGGTGTCATTAAGCAGTACAACAAGTTTGT...TGCGTGCAGGAGAAACCATGGAGCCTGCACTGCGTGCCGTGTGCAAGGATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGATCCCTGATGATGGTGTaGATGCCTCGGACCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRSLMMV*MPRTCG Trigger: ACCGCAGGTCCGAGGCATGCACACCATCATCAGGGA...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGATGCACACCCATCTCTaGCATGAGCAGGGACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAIPDQKTEGWVEIRVARMHTHL*HEQGQQ Trigger: TTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCAT...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAGGACACTCAGTGTCTaGGGGAGGGGATGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNRTLSV*GRGWHW Trigger: CCAGTGCCATCCCCTCCCCCAGACACTGAGTGTCCT...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGGCAGTGCAGGCTCCATaGTTTCTCCTGCACGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRAVQAP*FLLHAE Trigger: TTCTGCGTGCAGGAGAAACCATGGAGCCTGCACTGC...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTGGCTCCCCTGTGAGCTaGTTGGTCTGGATGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VPAIPDQKTEGWVEIRVAGSPVS*LVWMRI Trigger: TATCCTCATCCAGACCAACCAGCTCACAGGGGAGCC...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTACTGCCATCAGGGACTaGATCTGTCCCAAAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPAIPDQKTEGWVEIRVATAIRD*ICPKVA Trigger: CGCTACTTTGGGACAGATGCAGTCCCTGATGGCAGT...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGTAGTCCTGCCCCTGTaGAGTCTGTACAGTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVVVLPL*SLYSAV Trigger: GACTGCACTGTACAGACTCCACAGGGGCAGGACTAC...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGCAGTGCAGGCTCCATaGTTTCTCCTGCACGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRAVQAP*FLLHAE Trigger: TTCTGCGTGCAGGAGAAACCATGGAGCCTGCACTGC...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGGCTCCCCTGTGAGCTaGTTGGTCTGGATGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRGSPVS*LVWMRI Trigger: TATCCTCATCCAGACCAACCAGCTCACAGGGGAGCC...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTATCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVSSSWL*TCCTIR Trigger: CCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGA...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTATGGTACGTTTGCTTGTaGGAAGCAGGGGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVWYVCL*EAGVVL Trigger: CAGAACCACCCCTGCTTCGCACAAGCAAACGTACCA...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAATGCACACCCATCTCTaGCATGAGCAGGGACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVMHTHL*HEQGQQ Trigger: TTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCAT...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTACTAACCCACAGTGGCTaGCTCATCATCATCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVLTHSG*LIIITA Trigger: GGCAGTGATGATGATGAGGCAGCCACTGTGGGTTAG...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGACTAACCCACAGTGGCTaGCTCATCATCATCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRLTHSG*LIIITA Trigger: GGCAGTGATGATGATGAGGCAGCCACTGTGGGTTAG...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTGAGCTGGTTGGTCTaGATGAGGATAGTGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRVSWLV*MRIVPM Trigger: CATCGGCACTATCCTCATCCAGACCAACCAGCTCAC...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATTGGCCGCAGCACCTGTaGATACTGTGCAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNWPQHL*ILCSPS Trigger: TGATGGACTGCACAGTATCCACAGGTGCTGCGGCCA...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTGGCCGCAGCACCTGTaGATACTGTGCAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGWPQHL*ILCSPS Trigger: TGATGGACTGCACAGTATCCACAGGTGCTGCGGCCA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTTCCTCAGGCACATCATaGTCCAGGAGTACACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VPAIPDQKTEGWVEIRVASSGTS*SRSTRT Trigger: TGTACGTGTACTCCTGGACCATGATGTGCCTGAGGA...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
||
| 3UTR CAA 72 bp | AAGTTCCCAATGCCTGGGATGATACGGAAAAGGTCATaGACACGCTTGTCCACAGCTGTGGTGATGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFPMPGMIRKRS*TRLSTAVVMIL Trigger: GAGAATCATCACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCATTGGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGACATCTAGTGCCTCAATaGTCATTCTGGCCACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRHLVPQ*SFWPQW Trigger: CCACTGTGGCCAGAATGATCATTGAGGCACTAGATG...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTATGTACAGTGCAGTCCTaGAAGGGTAGGAAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVCTVQS*KGRKDS Trigger: ACTGTCCTTCCTACCCTTTCAGGACTGCACTGTACA...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGTCACATGGTCATCACTaGTATCCTTGGGAAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRSHGHH*YPWEAS Trigger: TGAGGCTTCCCAAGGATATCAGTGATGACCATGTGA...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATACTGCCATCAGGGACTaGATCTGTCCCAAAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNTAIRD*ICPKVA Trigger: CGCTACTTTGGGACAGATGCAGTCCCTGATGGCAGT...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGACCTCATCATCATCACTaGCATCAGGGACTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRPHHHH*HQGLHL Trigger: CAGATGCAGTCCCTGATGGCAGTGATGATGATGAGG...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGATTCATTGTACCATGGTaGCCGCCCAGCTGTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRFIVPW*PPSCVD Trigger: ATCTACACAGCTGGGCGGCCACCATGGTACAATGAA...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAATGTTCATTGTACCATaGTGGCCGCCCAGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVMFIVP*WPPSCV Trigger: TACACAGCTGGGCGGCCACCATGGTACAATGAACAT...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATTCATTCTGGCCACAGTaGTCTTCCCAGATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNSFWPQ*SSQMHC Trigger: GCAGTGCATCTGGGAAGACCACTGTGGCCAGAATGA...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTCATTCTGGCCACAGTaGTCTTCCCAGATGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGSFWPQ*SSQMHC Trigger: GCAGTGCATCTGGGAAGACCACTGTGGCCAGAATGA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTGCACAATCAGGTCAATaGCTACTGTGTTCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGAQSGQ*LLCSRS Trigger: GGAGCGGGAACACAGTAGCCATTGACCTGATTGTGC...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTGTGAGCTGGTTGGTCTaGATGAGGATAGTGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGVSWLV*MRIVPM Trigger: CATCGGCACTATCCTCATCCAGACCAACCAGCTCAC...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCACACCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTTGTCCTCAGTAGGCTGGATATACTaGTCAAATGCAGGTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ECTPISAMSRDSKKILSSVGWIY*SNAGLT Trigger: TGTCAAACCTGCATTTGATCAGTATATCCAGCCTAC...TGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTGTACAGTGCAGTCCTaGAAGGGTAGGAAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGCTVQS*KGRKDS Trigger: ACTGTCCTTCCTACCCTTTCAGGACTGCACTGTACA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTATCACATGGTCATCACTaGTATCCTTGGGAAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVSHGHH*YPWEAS Trigger: TGAGGCTTCCCAAGGATATCAGTGATGACCATGTGA...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTACGGAAAAGGTCATTaGCACGCTTGTCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGYGKGH*HACPQL Trigger: CAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTGTAGATGGTACGTTTaGTTGTGCGAAGCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGCRWYV*LCEAGV Trigger: CACCCCTGCTTCGCACAAGCAAACGTACCATCTACA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTAAAGTTCCCAATGCCTaGGATGATACGGAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAIPDQKTEGWVEIRVAKVPNA*DDTEKV Trigger: GACCTTTTCCGTATCATCCCAGGCATTGGGAACTTT...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTCACCTGTGGATACTGTaGAGTCCATCAGGATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGHLWIL*SPSGSH Trigger: ATGTGATCCTGATGGACTGCACAGTATCCACAGGTG...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATCACCTGTGGATACTGTaGAGTCCATCAGGATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNHLWIL*SPSGSH Trigger: ATGTGATCCTGATGGACTGCACAGTATCCACAGGTG...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGGCTGGATATACTaGTCAAATGCAGGTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRVGWIY*SNAGLT Trigger: TGTCAAACCTGCATTTGATCAGTATATCCAGCCTAC...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CCA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAAAGTTCCCAATGCCTaGGATGATACGGAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGKVPNA*DDTEKV Trigger: GACCTTTTCCGTATCATCCCAGGCATTGGGAACTTT...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR GCA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATACAAACTTGTTGTACTaGTTAATGACACCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNTNLLY*LMTPSM Trigger: CATTGAGGGTGTCATTAAGCAGTACAACAAGTTTGT...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS CCA 90 bp | CCTGCATTGCTGCGGTCCTCGCACGCCGTTTCATTCTGCTCGGCCTaGCGGCCAGGCACGTCTGGGGCCACAGCAGACTGCAGGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PALLRSSHAVSFCSA*RPGTSGATADCRGE Trigger: TTCGCCCCTGCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGCCAGGCCGAGCAGAATGAAACGGCGTGCGAGGACCGCAGCAATGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS GCA 90 bp | TCCAAGGTCCCTGCATTGCTGCGGTCCTCGCACGCCGTTTCATTCTaGTCGGCCTGGCGGCCAGGCACGTCTGGGGCCACAGCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKVPALLRSSHAVSF*SAWRPGTSGATADC Trigger: GCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGCCAGGCCGAGCAGAATGAAACGGCGTGCGAGGACCGCAGCAATGCAGGGACCTTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS GCA 90 bp | TGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTGGCTGGTGGTaGGCTTCCGGGGTGAGCGCCCAGTACCCACTGGTGGGAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CLCEAGVVLTCTGWW*ASGVSAQYPLVGEV Trigger: GACTTCTCCCACCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS CCA 90 bp | GTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTGGCTGGTaGTGCGCTTCCGGGGTGAGCGCCCAGTACCCACTGGTGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCLCEAGVVLTCTGW*CASGVSAQYPLVGE Trigger: TTCTCCCACCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS CCA 90 bp | TACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTGGCTaGTGGTGCGCTTCCGGGGTGAGCGCCCAGTACCCACTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YVCLCEAGVVLTCTG*WCASGVSAQYPLVG Trigger: TCCCACCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS TCA 90 bp | GGCACTGGTGAGCGGAGGCCAACGCGGCCCTCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGGTCAATGGCTACTGTGTTCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGERRPTRPSSSWL*TCCTIRSMATVFPL Trigger: GAGCGGGAACACAGTAGCCATTGACCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGAGGGCCGCGTTGGCCTCCGCTCACCAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS CCA 90 bp | ATGGTACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTaGCTGGTGGTGCGCTTCCGGGGTGAGCGCCCAGTACCCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MVRLLVRSRGGSDLH*LVVRFRGERPVPTG Trigger: ACCAGTGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS TCA 90 bp | GCCAACGCGGCCCTGACGCTGAGTTCGCGCTCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGGTCAATGGCTACTGTGTTCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ANAALTLSSRSSSWL*TCCTIRSMATVFPL Trigger: GAGCGGGAACACAGTAGCCATTGACCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGAGCGCGAACTCAGCGTCAGGGCCGCGTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
||
| CDS GCA 90 bp | TGTAGATGGTACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTaGACTGGCTGGTGGTGCGCTTCCGGGGTGAGCGCCCAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRWYVCLCEAGVVLT*TGWWCASGVSAQYP Trigger: TGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTACCATCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS-3UTR CAA 90 bp | GAATGCACACCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTTGTCCTCAAAGGGGCGGCGCTCATaGAGGCCGGCGGCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ECTPISAMSRDSKKILSSKGRRS*RPAAQP Trigger: TGGCTGCGCCGCCGGCCTCAATGAGCGCCGCCCCTT...TGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTAAGGGGCGGCGCTCATaGAGGCCGGCGGCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAIPDQKTEGWVEIRVAKGRRS*RPAAQP Trigger: TGGCTGCGCCGCCGGCCTCAATGAGCGCCGCCCCTT...AGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS GCA 90 bp | GTTCATTGTACCATGGTGGCCGCCCAGCTGTGTAGATGGTACGTTTaGTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHCTMVAAQLCRWYV*LCEAGVVLTCTGWW Trigger: CCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGTACAATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTTGTCCACAGCTGTGGTGAGGGGTGGTTCTGACTaGCACTGGCTGGTGGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: MPGMIRKRSLTRLSTAVVRGGSD*HWLVVR Trigger: GCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCT...CACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGCCGATGCGCACATCCTaGCACACGGCACGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAIPDQKTEGWVEIRVARPMRTS*HTARSA Trigger: TGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGG...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS CCA 90 bp | GTGTACCATGTTCATTGTACCATGGTGGCCGCCCAGCTGTGTAGATaGTACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VYHVHCTMVAAQLCR*YVCLCEAGVVLTCT Trigger: AGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGTACAATGAACATGGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS CCA 90 bp | AGCAAAGGCCTCCTTGGACTGTGTACCATGTTCATTGTACCATGGTaGCCGCCCAGCTGTGTAGATGGTACGTTTGCTTGTGCGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKGLLGLCTMFIVPW*PPSCVDGTFACAKQ Trigger: CTGCTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGTACAATGAACATGGTACACAGTCCAAGGAGGCCTTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS-3UTR CAA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGGGGTGGTTCTGACTaGCACTGGCTGGTGGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGRGGSD*HWLVVR Trigger: GCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCT...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTCCGATGCGCACATCCTaGCACACGGCACGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGPMRTS*HTARSA Trigger: TGCACTGCGTGCCGTGTGCAAGGATGTGCGCATCGG...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS CCA 90 bp | AATAGCAAAGGCCTCCTTGGACTGTGTACCATGTTCATTGTACCATaGTGGCCGCCCAGCTGTGTAGATGGTACGTTTGCTTGTGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSKGLLGLCTMFIVP*WPPSCVDGTFACAK Trigger: CTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGTACAATGAACATGGTACACAGTCCAAGGAGGCCTTTGCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTGGATGAGGATAGTGCCGATGCGCACATCCTTGCACACGGCACGCAGTGGTTTGACAAACTTGTaGTACTGCTTAATGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LVWMRIVPMRTSLHTARSGLTNL*YCLMTP Trigger: GGGTGTCATTAAGCAGTACAACAAGTTTGTCAAACC...ACTGCGTGCCGTGTGCAAGGATGTGCGCATCGGCACTATCCTCATCCAGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | AATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGACAGGTCCCCTGTGAGCTGGTaGGTCTGGATGAGGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSRPEDRRLGRNKSSSDRSPVSW*VWMRIV Trigger: CACTATCCTCATCCAGACCAACCAGCTCACAGGGGA...CCTGTCCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGAGGTCATTGACACGCTaGTCCACAGCTGTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAIPDQKTEGWVEIRVARRSLTR*STAVVM Trigger: CATCACCACAGCTGTGGACAAGCGTGTCAATGACCT...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGATCATAGATGGGCACTaGGACACTCCTGCCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAIPDQKTEGWVEIRVARIIDGH*DTPALF Trigger: AAACAGGGCAGGAGTGTCCAAGTGCCCATCTATGAT...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | AATAAGTTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTTCCCGGCTAGTCTCCTaGTCCCTGATGATGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKLMCCPCNSRPEDRRLGSRLVS*SLMMVC Trigger: GCACACCATCATCAGGGACAAGGAGACTAGCCGGGA...ACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAACTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGATCCCCTGTGAGCTGGTaGGTCTGGATGAGGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRSPVSW*VWMRIV Trigger: CACTATCCTCATCCAGACCAACCAGCTCACAGGGGA...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAAGGTCATTGACACGCTaGTCCACAGCTGTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRRSLTR*STAVVM Trigger: CATCACCACAGCTGTGGACAAGCGTGTCAATGACCT...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCTCGGATACGGAAAAGGTCATaGACACGCTTGTCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAIPDQKTEGWVEIRVARIRKRS*TRLSTA Trigger: AGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTAT...CCGAGCTACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRDSKKI*SSGTSW Trigger: CCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTC...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAATACGGAAAAGGTCATaGACACGCTTGTCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CVVPAIPDQKTEGWVEIRIRKRS*TRLSTA Trigger: AGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTAT...TCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS TCA 90 bp | CTGGGCACCACAATATCTGCCAGCCGCATGGTAGGCTGGATATACTaGTCAAATGCAGGTTTGACAAACTTGTTGTACTGCTTAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGTTISASRMVGWIY*SNAGLTNLLYCLMT Trigger: TGTCATTAAGCAGTACAACAAGTTTGTCAAACCTGCATTTGATCAGTATATCCAGCCTACCATGCGGCTGGCAGATATTGTGGTGCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCTGGGATGATACGGAAAAGGTCATTGACACGCTTGTCCACAGCTGTGGTGCAGGTTTGACAAACTaGTTGTACTGCTTAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: NAWDDTEKVIDTLVHSCGAGLTN*LYCLMT Trigger: TGTCATTAAGCAGTACAACAAGTTTGTCAAACCTGC...ACCACAGCTGTGGACAAGCGTGTCAATGACCTTTTCCGTATCATCCCAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | TTAATGTGTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LMCCPCNSRPEDRRLGRNDSKKI*SSGTSW Trigger: CCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTC...ATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAACACATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000134340.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGGTTTGACAAACTTGTaGTACTGCTTAATGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVGLTNL*YCLMTP Trigger: GGGTGTCATTAAGCAGTACAACAAGTTTGTCAAACC...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS GCA 90 bp | CACAATATCTGCCAGCCGCATGGTAGGCTGGATATACTGATCAAATaGAGGTTTGACAAACTTGTTGTACTGCTTAATGACACCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HNICQPHGRLDILIK*RFDKLVVLLNDTLN Trigger: ATTGAGGGTGTCATTAAGCAGTACAACAAGTTTGTCAAACCTGCATTTGATCAGTATATCCAGCCTACCATGCGGCTGGCAGATATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTCCCTGCAATTCCAGACCAGAAGACAGAAGGCTGGGTAGAAATAAGAGTAGCAGGTTTGACAAACTaGTTGTACTGCTTAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: VVPAIPDQKTEGWVEIRVAGLTN*LYCLMT Trigger: TGTCATTAAGCAGTACAACAAGTTTGTCAAACCTGC...TACTCTTATTTCTACCCAGCCTTCTGTCTTCTGGTCTGGAATTGCAGGGACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS CCA 72 bp | CGTTTCATTCTGCTCGGCCTGGCGGCCAGGCACGTCTaGGGCCACAGCAGACTGCAGGGGCGAAGGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFILLGLAARHV*GHSRLQGRRGG Trigger: GCCGCCCCTTCGCCCCTGCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGCCAGGCCGAGCAGAATGAAACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS CCA 72 bp | CTGCGGTCCTCGCACGCCGTTTCATTCTGCTCGGCCTaGCGGCCAGGCACGTCTGGGGCCACAGCAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSSHAVSFCSA*RPGTSGATADC Trigger: GCAGTCTGCTGTGGCCCCAGACGTGCCTGGCCGCCAGGCCGAGCAGAATGAAACGGCGTGCGAGGACCGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS GCA 72 bp | CCTGCATTGCTGCGGTCCTCGCACGCCGTTTCATTCTaGTCGGCCTGGCGGCCAGGCACGTCTGGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PALLRSSHAVSF*SAWRPGTSGAT Trigger: TGTGGCCCCAGACGTGCCTGGCCGCCAGGCCGAGCAGAATGAAACGGCGTGCGAGGACCGCAGCAATGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
||
| CDS TCA 72 bp | AGGACACTCAGTGTCTGGGGGAGGGGATGGCACTGGTaGGCGGAGGCCAACGCGGCCCTGACGCTGAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RTLSVWGRGWHW*AEANAALTLSS Trigger: CGAACTCAGCGTCAGGGCCGCGTTGGCCTCCGCTCACCAGTGCCATCCCCTCCCCCAGACACTGAGTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
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| CDS TCA 72 bp | AGGACACTCAGTGTCTGGGGGAGGGGATGGCACTGGTaGGCGGAGGCCAACGCGGCCCTCTTCCAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RTLSVWGRGWHW*AEANAALFQLA Trigger: AGCCAGCTGGAAGAGGGCCGCGTTGGCCTCCGCTCACCAGTGCCATCCCCTCCCCCAGACACTGAGTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129469.8 ENSMUST00000154613.8 |
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| CDS CAA 90 bp | CGCCCAGTACCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTGCATaGCTGCGGTCCTCGCACGCCGTTTCATTCTGCTCGGCCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPVPTGGRSLSKVPA*LRSSHAVSFCSAWR Trigger: CCGCCAGGCCGAGCAGAATGAAACGGCGTGCGAGGACCGCAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGGTACTGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS CCA 72 bp | TTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTGGCTaGTGGTGCGCTTCCGGGGTGAGCGCCCAGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: LCEAGVVLTCTG*WCASGVSAQYP Trigger: TGGGTACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS GCA 72 bp | TACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTaGACTGGCTGGTGGTGCGCTTCCGGGGTGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: YVCLCEAGVVLT*TGWWCASGVSA Trigger: GGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CCA 72 bp | TTGCTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACTaGCTGGTGGTGCGCTTCCGGGGTGAGCGCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LLVRSRGGSDLH*LVVRFRGERPV Trigger: TACTGGGCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CAA 72 bp | GTACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTGACTaGCACTGGCTGGTGGTGCGCTTCCGGGGTGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VRLLVRSRGGSD*HWLVVRFRGER Trigger: GCGCTCACCCCGGAAGCGCACCACCAGCCAGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CAA 72 bp | CCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTGCATaGCTGCGGTCCTCGCACGCCGTTTCATTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PTGGRSLSKVPA*LRSSHAVSFCS Trigger: CGAGCAGAATGAAACGGCGTGCGAGGACCGCAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS CAA 90 bp | CGCCCAGTACCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTGCATaGCTGTTTTCAGGTGCCTTCCCAGCTCCAGCCTTCTTCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RPVPTGGRSLSKVPA*LFSGAFPAPAFFPV Trigger: CACTGGGAAGAAGGCTGGAGCTGGGAAGGCACCTGAAAACAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGGTACTGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144856.8 |
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| CDS GCA 72 bp | CCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTGCATTaGTGCTGCTTTCTGCTCCAAGAGTCCAGCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLVGEVCPRSLH*CCFLLQESSTL Trigger: CAGGGTGCTGGACTCTTGGAGCAGAAAGCAGCAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136875.2 |
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| CDS CAA 72 bp | CCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTGCATaGCTGTTTTCAGGTGCCTTCCCAGCTCCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PTGGRSLSKVPA*LFSGAFPAPAF Trigger: GAAGGCTGGAGCTGGGAAGGCACCTGAAAACAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144856.8 |
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| CDS TCA 72 bp | GCCCTGACGCTGAGTTCGCGCTCTTCCAGCTGGCTGTaGACATGCTGCACAATCAGGTCAATGGCTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ALTLSSRSSSWL*TCCTIRSMATV Trigger: CACAGTAGCCATTGACCTGATTGTGCAGCATGTTCACAGCCAGCTGGAAGAGCGCGAACTCAGCGTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
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| CDS GCA 72 bp | ACCATGGTGGCCGCCCAGCTGTGTAGATGGTACGTTTaGTTGTGCGAAGCAGGGGTGGTTCTGACTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: TMVAAQLCRWYV*LCEAGVVLTCT Trigger: AGTGCAAGTCAGAACCACCCCTGCTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS GCA 72 bp | TCATCCCGGCTAGTCTCCTTGTCCCTGATGATGGTGTaGATGCCTCGGACCTGCGGTGTACTCTTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SSRLVSLSLMMV*MPRTCGVLLRT Trigger: TGTCCTCAAGAGTACACCGCAGGTCCGAGGCATGCACACCATCATCAGGGACAAGGAGACTAGCCGGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057816.15 |
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| CDS GCA 72 bp | AGTACCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTaGATTGCTGTTTTCAGGTGCCTTCCCAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: STHWWEKSVQGP*IAVFRCLPSSS Trigger: GCTGGAGCTGGGAAGGCACCTGAAAACAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144856.8 |
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| CDS GCA 72 bp | AGTACCCACTGGTGGGAGAAGTCTGTCCAAGGTCCCTaGATTGCTGCTGCTTTCTGCTCCAAGAGTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: STHWWEKSVQGP*IAAAFCSKSPA Trigger: TGCTGGACTCTTGGAGCAGAAAGCAGCAGCAATGCAGGGACCTTGGACAGACTTCTCCCACCAGTGGGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136875.2 |
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| CDS CCA 72 bp | GTTCATTGTACCATGGTGGCCGCCCAGCTGTGTAGATaGTACGTTTGCTTGTGCGAAGCAGGGGTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VHCTMVAAQLCR*YVCLCEAGVVL Trigger: CAGAACCACCCCTGCTTCGCACAAGCAAACGTACCATCTACACAGCTGGGCGGCCACCATGGTACAATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CAA 90 bp | TTCCCAGATGCACTGCCACCTCCTAAGCCAATAGCAAAGGCCTCCTaGGACTGTGTACCATGTTCATTGTACCATGGTGGCCGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FPDALPPPKPIAKAS*DCVPCSLYHGGRPA Trigger: AGCTGGGCGGCCACCATGGTACAATGAACATGGTACACAGTCCAAGGAGGCCTTTGCTATTGGCTTAGGAGGTGGCAGTGCATCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CAA 90 bp | GAATGCACACCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGGTCAGCCATCATGGCCGCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: ECTPISAMSRDSKKI*SSGTSWSAIMAAAP Trigger: AGGTGCTGCGGCCATGATGGCTGACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGGTGTGCATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134340.8 |
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| CDS TCA 72 bp | ACAACAGGACCACCCAGGGCACATCTAGTGCCTCAATaGTCATTCTGGCCACAGTGGTCTTCCCAGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: TTGPPRAHLVPQ*SFWPQWSSQMH Trigger: GTGCATCTGGGAAGACCACTGTGGCCAGAATGATCATTGAGGCACTAGATGTGCCCTGGGTGGTCCTGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS CCA 72 bp | GCACATCATGGTCAGCCATCATGGCCGCAGCACCTGTaGATACTGTGCAGTCCATCAGGATCACATGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: AHHGQPSWPQHL*ILCSPSGSHGH Trigger: ATGACCATGTGATCCTGATGGACTGCACAGTATCCACAGGTGCTGCGGCCATGATGGCTGACCATGATGTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134340.8 |
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| CDS CAA 72 bp | CCCATCTCTGCCATGAGCAGGGACAGCAAAAAGATCTaGTCCTCAGGCACATCATGGTCAGCCATCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: PISAMSRDSKKI*SSGTSWSAIMA Trigger: GGCCATGATGGCTGACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCTGCTCATGGCAGAGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134340.8 |
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| CDS CCA 72 bp | AGGGACAGCAAAAAGATCTTGTCCTCAGGCACATCATaGTCAGCCATCATGGCCGCAGCACCTGTGGATACT | + |
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Preference number: 6 (lower is better) Translates to: RDSKKILSSGTS*SAIMAAAPVDT Trigger: AGTATCCACAGGTGCTGCGGCCATGATGGCTGACCATGATGTGCCTGAGGACAAGATCTTTTTGCTGTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134340.8 |
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| CDS CAA 72 bp | GCACTGCCACCTCCTAAGCCAATAGCAAAGGCCTCCTaGGACTGTGTACCATGTTCATTGTACCATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALPPPKPIAKAS*DCVPCSLYHGG Trigger: GCCACCATGGTACAATGAACATGGTACACAGTCCAAGGAGGCCTTTGCTATTGGCTTAGGAGGTGGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 ENSMUST00000136875.2 ENSMUST00000144856.8 |
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| CDS TCA 72 bp | ACAATATCTGCCAGCCGCATGGTAGGCTGGATATACTaGTCAAATGCAGGTTTGACAAACTTGTTGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: TISASRMVGWIY*SNAGLTNLLYC Trigger: GCAGTACAACAAGTTTGTCAAACCTGCATTTGATCAGTATATCCAGCCTACCATGCGGCTGGCAGATATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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| CDS GCA 72 bp | TGCCAGCCGCATGGTAGGCTGGATATACTGATCAAATaGAGGTTTGACAAACTTGTTGTACTGCTTAATGAC | + |
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Preference number: 6 (lower is better) Translates to: CQPHGRLDILIK*RFDKLVVLLND Trigger: GTCATTAAGCAGTACAACAAGTTTGTCAAACCTGCATTTGATCAGTATATCCAGCCTACCATGCGGCTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057816.15 ENSMUST00000129469.8 |
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