Pregenerated sensors for UCHL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018189Ensembl transcript IDs: ENSMUST00000018333.13, ENSMUST00000185493.7, ENSMUST00000185539.2, ENSMUST00000189936.7
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTaGTACTATGCCAAACGTGCACTGAGTCAATTAAGATGTTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GRERILTPCIKDKTD*YYAKRALSQLRCCP Trigger: TGGACAACATCTTAATTGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR GCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATaGCAAACGTGCACTGAGTCAATTAAGATGTTGTCCAAAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: KNFNSMHKGQDRLVL*QTCTESIKMLSKVP Trigger: AGGAACTTTGGACAACATCTTAATTGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTAGACAGACTGGTACTATaGCAAACGTGCACTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: PRSRIEEWSLASTFSSLLDRLVL*QTCTES Trigger: TGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTC...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTAAAGGACAAGACAGACTaGTACTATGCCAAACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PRSRIEEWSLASTFSSLLKDKTD*YYAKRA Trigger: TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTT...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCAGTCCATGAAATTAAGTaGAGCACACTGTACACACGT | + |
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Preference number: 2 (lower is better) Translates to: ILTPCIKDKTDWYYAKRAVHEIK*STLYTR Trigger: ACGTGTGTACAGTGTGCTGCACTTAATTTCATGGAC...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGAAGGACAAGACAGACTaGTACTATGCCAAACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTKDKTD*YYAKRA Trigger: TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTT...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGTCCATGAAATTAAGTaGAGCACACTGTACACACGT | + |
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Preference number: 2 (lower is better) Translates to: GRERILTPCIKDKTDWYYVHEIK*STLYTR Trigger: ACGTGTGTACAGTGTGCTGCACTTAATTTCATGGAC...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAGTACTATGCCAAACGTaGACTGAGTCAATTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: YALHAHDAGRERILTPCIVLCQT*TESIKM Trigger: CATCTTAATTGACTCAGTGCACGTTTGGCATAGTAC...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCTTCACTTAGTGTACTATGCCAAACGTaGACTGAGTCAATTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: MKLSAAHCTHVQISSSLSVLCQT*TESIKM Trigger: CATCTTAATTGACTCAGTGCACGTTTGGCATAGTAC...ACTAAGTGAAGAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTAAAGGACAAGACAGACTaGTACTATGCCAAACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LLYIFIKNRISLSKWLALKDKTD*YYAKRA Trigger: TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTT...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCATCCAGAATTGAAGAATaGAGTTTAGCCAGCACTTTT | + |
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Preference number: 2 (lower is better) Translates to: ILTPCIKDKTDWYYAKRASRIEE*SLASTF Trigger: AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGA...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTAAGAATTTTAACTCCATaGATAAAGGACAAGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: PRSRIEEWSLASTFSSLLRILTP*IKDKTD Trigger: GTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCT...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGGTGTTTCTCAAAATGTaGTACACAGATCAGTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTVFLKM*YTDQLH Trigger: ATGCAACTGATCTGTGTACCACATTTTGAGAAACAC...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| 3UTR GCA 72 bp | AACTCCATGCATAAAGGACAAGACAGACTGGTACTATaGCAAACGTGCACTGAGTCAATTAAGATGTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: NSMHKGQDRLVL*QTCTESIKMLS Trigger: GGACAACATCTTAATTGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR GCA 72 bp | CATAAAGGACAAGACAGACTGGTACTATGCCAAACGTaGACTGAGTCAATTAAGATGTTGTCCAAAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: HKGQDRLVLCQT*TESIKMLSKVP Trigger: AGGAACTTTGGACAACATCTTAATTGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| 3UTR CCA 72 bp | AGAGTACCAAGAACTCCCAGATCCAGAATTGAAGAATaGAGTTTAGCCAGCACTTTTTCGTCACTTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: RVPRTPRSRIEE*SLASTFSSLLF Trigger: AAATAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCCGGGGTCGCTTTCCATaGGACACCACTCCCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NGVHEIKCSTLYTRPNILRGRFP*DTTPRH Trigger: ATGCCGGGGAGTGGTGTCTCATGGAAAGCGACCCCG...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTACGGGGTCGCTTTCCATaGGACACCACTCCCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALRGRFP*DTTPRH Trigger: ATGCCGGGGAGTGGTGTCTCATGGAAAGCGACCCCG...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCAACACGGTACTACCTTaGTCTGTATCCATGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NGVHEIKCSTLYTRPNILNTVLP*SVSMGS Trigger: GGAACCCATGGATACAGATCAAGGTAGTACCGTGTT...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTCATATTTCTTCTACTTaGGCCCCTCGGCAACCGAAT | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFHISST*APRQPN Trigger: ATTCGGTTGCCGAGGGGCCCAAGTAGAAGAAATATG...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGCATATTTCTTCTACTTaGGCCCCTCGGCAACCGAAT | + |
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Preference number: 4 (lower is better) Translates to: HAHDAGRERILTPCIKDKHISST*APRQPN Trigger: ATTCGGTTGCCGAGGGGCCCAAGTAGAAGAAATATG...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGCAGCCTCCCATTGACTaGAACGTAACTGACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HAHDAGRERILTPCIKDKQPPID*NVTDKV Trigger: CACTTTGTCAGTTACGTTCCAGTCAATGGGAGGCTG...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCCAGCCTCCCATTGACTaGAACGTAACTGACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: NGVHEIKCSTLYTRPNILQPPID*NVTDKV Trigger: CACTTTGTCAGTTACGTTCCAGTCAATGGGAGGCTG...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAACACGGTACTACCTTaGTCTGTATCCATGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YALHAHDAGRERILTPCINTVLP*SVSMGS Trigger: GGAACCCATGGATACAGATCAAGGTAGTACCGTGTT...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTAGCAGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFSRFFS*LPLEKK Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCTGCT...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATACAGCCTCCCATTGACTaGAACGTAACTGACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: YALHAHDAGRERILTPCIQPPID*NVTDKV Trigger: CACTTTGTCAGTTACGTTCCAGTCAATGGGAGGCTG...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGCTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: HAHDAGRERILTPCIKDKLDLYP*VPLQVV Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018333.13 |
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| CDS-3UTR TCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATTTGTCGAATCACATCTaGGTTACTCAATGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYLSNHI*VTQCQP Trigger: GGGCTGGCATTGAGTAACTCAGATGTGATTCGACAA...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATAACACGGTACTACCTTaGTCTGTATCCATGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYNTVLP*SVSMGS Trigger: GGAACCCATGGATACAGATCAAGGTAGTACCGTGTT...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTACTGGCAACTTCTGACTaGATAGCACTTAACACGGTA | + |
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Preference number: 4 (lower is better) Translates to: PRSRIEEWSLASTFSSLLLATSD*IALNTV Trigger: TACCGTGTTAAGTGCTATTCAGTCAGAAGTTGCCAG...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTCTGGCAAAACTGTTGTaGACTTGTCGAATCACATCT | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFLAKLL*TCRITS Trigger: AGATGTGATTCGACAAGTGCACAACAGTTTTGCCAG...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTGGAATTAACTGCTGGTaGTCAGCTAAGGTCTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFGINCW*SAKVFN Trigger: GTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCC...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTCCTTTTCTCTATTACTaGCCTCACTGCAGTAATCCA | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFPFLYY*PHCSNP Trigger: TGGATTACTGCAGTGAGGCCAGTAATAGAGAAAAGG...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCACTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRALDLYP*VPPLQV Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATCTGGCAACTTCTGACTaGATAGCACTTAACACGGTA | + |
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Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYLATSD*IALNTV Trigger: TACCGTGTTAAGTGCTATTCAGTCAGAAGTTGCCAG...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | GTACCAAGAACTCCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT | + |
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Preference number: 4 (lower is better) Translates to: VPRTPRSRIEEWSLASTFGSSPG*HLKRKI Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...AAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGGAGTTCTTGGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATACTGGCAAAACTGTTGTaGACTTGTCGAATCACATCT | + |
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Preference number: 4 (lower is better) Translates to: YALHAHDAGRERILTPCILAKLL*TCRITS Trigger: AGATGTGATTCGACAAGTGCACAACAGTTTTGCCAG...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTATATTACTGGCCTCACTaGAGTAATCCAGTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: PRSRIEEWSLASTFSSLLYYWPH*SNPVIL Trigger: CAAGATGACTGGATTACTGCAGTGAGGCCAGTAATA...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCATATTACTGGCCTCACTaGAGTAATCCAGTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRAYYWPH*SNPVIL Trigger: CAAGATGACTGGATTACTGCAGTGAGGCCAGTAATA...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAGGAATTAACTGCTGGTaGTCAGCTAAGGTCTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: YALHAHDAGRERILTPCIGINCW*SAKVFN Trigger: GTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCC...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATCAAACATCTGCTGCCTaGCAAAACTGTTGTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYQTSAA*QNCCAL Trigger: AAGTGCACAACAGTTTTGCCAGGCAGCAGATGTTTG...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCATCCTCCTCTTTGGCTaGTGTCTTTGTATCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: NGVHEIKCSTLYTRPNILILLFG*CLCIKF Trigger: GAATTTGATACAAAGACACCAGCCAAAGAGGAGGAT...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGATCCTCCTCTTTGGCTaGTGTCTTTGTATCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: HAHDAGRERILTPCIKDKILLFG*CLCIKF Trigger: GAATTTGATACAAAGACACCAGCCAAAGAGGAGGAT...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTACCTTTTCTCTATTACTaGCCTCACTGCAGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRSRIEEWSLASTFSSLLPFLYY*PHCSNP Trigger: TGGATTACTGCAGTGAGGCCAGTAATAGAGAAAAGG...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGTCTTCAATAAGCATCTaGTTTCTGGCAACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAHDAGRERILTPCIKDKSSISI*FLATSD Trigger: GTCAGAAGTTGCCAGAAACCAGATGCTTATTGAAGA...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGCCTAAATGCACATCTTaGTGCGTACAGTTCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTPKCTS*CVQFSS Trigger: ACTACTGAACTGTACGCATCAAGATGTGCATTTAGG...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCAGTAATCCAGTCATCTTaGTTGCATGCACCTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRAVIQSS*LHAPKS Trigger: TGATTTAGGTGCATGCAATCAAGATGACTGGATTAC...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGAATTCAAACATCTGCTaGCTGGCAAAACTGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTNSNIC*LAKLLC Trigger: GCACAACAGTTTTGCCAGGCAGCAGATGTTTGAATT...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | TATGCACTACATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATATCAAATTCAAACATCTaGTGCCTGGCAAAACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YALHAHDAGRERILTPCISNSNI*CLAKLL Trigger: CAACAGTTTTGCCAGGCAGCAGATGTTTGAATTTGA...TATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATGTAGTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCATCAAATTCAAACATCTaGTGCCTGGCAAAACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRASNSNI*CLAKLL Trigger: CAACAGTTTTGCCAGGCAGCAGATGTTTGAATTTGA...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGCCTTTTCTCTATTACTaGCCTCACTGCAGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTPFLYY*PHCSNP Trigger: TGGATTACTGCAGTGAGGCCAGTAATAGAGAAAAGG...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCATCTTCAATAAGCATCTaGTTTCTGGCAACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRASSISI*FLATSD Trigger: GTCAGAAGTTGCCAGAAACCAGATGCTTATTGAAGA...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGTAATCCAGTCATCTTaGTTGCATGCACCTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYVIQSS*LHAPKS Trigger: TGATTTAGGTGCATGCAATCAAGATGACTGGATTAC...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTACTGGCAACTTCTGACTaGATAGCACTTAACACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALLATSD*IALNTV Trigger: TACCGTGTTAAGTGCTATTCAGTCAGAAGTTGCCAG...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCAATTCTTTCCCCTACATaGGAATATCTTTTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTPCIKDKTDWYYAKRAILSPT*EYLFHK Trigger: CTTGTGGAAAAGATATTCTCATGTAGGGGAAAGAAT...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| CDS-3UTR GCA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: GRERILTPCIKDKTDWYYGSSPG*HLKRKI Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTATCCAGTCATCTTGATTaGATGCACCTAAATCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSRIEEWSLASTFSSLLSSHLD*MHLNQL Trigger: CAATTGATTTAGGTGCATGCAATCAAGATGACTGGA...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTAAGCAGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALSRFFS*LPLEKK Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCTGCT...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CCA 90 bp | CAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTAAAAATCAAATAGGTGTACTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKSYQSFQMAGLKNQIGVLDLYP*VPPLQV Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...TACACCTATTTGATTTTTAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189936.7 |
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| CDS-3UTR TCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTACCTAAATGCACATCTTaGTGCGTACAGTTCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALPKCTS*CVQFSS Trigger: ACTACTGAACTGTACGCATCAAGATGTGCATTTAGG...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | ATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCTTCACTTAGTTCCAGTCATCTTGATTaGATGCACCTAAATCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: MKLSAAHCTHVQISSSLSSSHLD*MHLNQL Trigger: CAATTGATTTAGGTGCATGCAATCAAGATGACTGGA...ACTAAGTGAAGAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| CDS-3UTR CCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTATCTTCAATAAGCATCTaGTTTCTGGCAACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALSSISI*FLATSD Trigger: GTCAGAAGTTGCCAGAAACCAGATGCTTATTGAAGA...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR GCA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTATCCAGTCATCTTGATTaGATGCACCTAAATCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFIKNRISLSKWLALSSHLD*MHLNQL Trigger: CAATTGATTTAGGTGCATGCAATCAAGATGACTGGA...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCCCATATTTCTTCTACTaGGGCCCCTCGGCAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NGVHEIKCSTLYTRPNILPYFFY*GPSATE Trigger: TTCGGTTGCCGAGGGGCCCAAGTAGAAGAAATATGG...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTACCATATTTCTTCTACTaGGGCCCCTCGGCAACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRSRIEEWSLASTFSSLLPYFFY*GPSATE Trigger: TTCGGTTGCCGAGGGGCCCAAGTAGAAGAAATATGG...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | GTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCTTCACTATGCACCTAAATCAATaGGGCCCTCTCTTAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VHEIKCSTLYTRPNILFTMHLNQ*GPLLTR Trigger: ACGGGTTAAGAGAGGGCCCAATTGATTTAGGTGCAT...AGTGAAGAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| CDS CCA 90 bp | GACTGGAACGTAACTGACAAAGTGAAAAGCATCCTCCTCTTTGGCTaGTGTCTTTGTATCAAATTCAAACATCTGCTGCCTGGCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: DWNVTDKVKSILLFG*CLCIKFKHLLPGKT Trigger: AGTTTTGCCAGGCAGCAGATGTTTGAATTTGATACAAAGACACCAGCCAAAGAGGAGGATGCTTTTCACTTTGTCAGTTACGTTCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185493.7 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | ATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTGCAATGCACCTAAATCAATaGGGCCCTCTCTTAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ILTPCIKDKTDWYYAKRAMHLNQ*GPLLTR Trigger: ACGGGTTAAGAGAGGGCCCAATTGATTTAGGTGCAT...TGCACGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | CATGCCCATGATGCAGGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: HAHDAGRERILTPCIKDKSPGCH*KRKINP Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...CTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACCTGCATCATGGGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | CCCAGATCCAGAATTGAAGAATGGAGTTTAGCCAGCACTTTTTCGTCACTTTTAAAAGCATCCTCCTCTTaGGCTGGTGTCTTTGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSRIEEWSLASTFSSLLKASSS*AGVFVS Trigger: TGATACAAAGACACCAGCCAAAGAGGAGGATGCTTT...TAAAAGTGACGAAAAAGTGCTGGCTAAACTCCATTCTTCAATTCTGGATCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | AAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATGCCAAACGTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KNFNSMHKGQDRLVLCQTSPGCH*KRKINP Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...CGTTTGGCATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | CTTCTTTACATATTCATCAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTATGCCTGGCAAAACTGTaGTGCACTTGTCGAATCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLYIFIKNRISLSKWLALCLAKL*CTCRIT Trigger: TGTGATTCGACAAGTGCACAACAGTTTTGCCAGGCA...TAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTGATGAATATGTAAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | AATGGTGTCCATGAAATTAAGTGCAGCACACTGTACACACGTCCAAATATCCTCCTTTGGCTGGTGTCTTaGTATCAAATTCAAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: NGVHEIKCSTLYTRPNILLWLVS*YQIQTS Trigger: AGATGTTTGAATTTGATACAAAGACACCAGCCAAAG...GAGGATATTTGGACGTGTGTACAGTGTGCTGCACTTAATTTCATGGACACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS CCA 90 bp | TTTCCCCTACATGAGAATATCTTTTCCACAAGTGGAATTAACTGCTaGTGCTCAGCTAAGGTCTTTAACAATTCCATAATGAAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPLHENIFSTSGINC*CSAKVFNNSIMKGK Trigger: CTTGCCTTTCATTATGGAATTGTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCCACTTGTGGAAAAGATATTCTCATGTAGGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATCGTATCAGTCTTTCCAAATGGCTGGCCTTAAAAATCAAATAGGTGTAAAAGCATCCTCCTCTTaGGCTGGTGTCTTTGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: QKSYQSFQMAGLKNQIGVKASSS*AGVFVS Trigger: TGATACAAAGACACCAGCCAAAGAGGAGGATGCTTT...TACACCTATTTGATTTTTAAGGCCAGCCATTTGGAAAGACTGATACGATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS-3UTR CAA 90 bp | GGTAGGGAAAGAATTTTAACTCCATGCATAAAGGACAAGACAGACTGGTACTATCTTTGGCTGGTGTCTTaGTATCAAATTCAAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: GRERILTPCIKDKTDWYYLWLVS*YQIQTS Trigger: AGATGTTTGAATTTGATACAAAGACACCAGCCAAAG...ATAGTACCAGTCTGTCTTGTCCTTTATGCATGGAGTTAAAATTCTTTCCCTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS TCA 72 bp | CCTGGCAAAACTGTTGTGCACTTGTCGAATCACATCTaGGTTACTCAATGCCAGCCCCTTCATCTGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGKTVVHLSNHI*VTQCQPLHLLG Trigger: GCCAAGCAGATGAAGGGGCTGGCATTGAGTAACTCAGATGTGATTCGACAAGTGCACAACAGTTTTGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185493.7 |
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| CDS TCA 72 bp | CCTGGCAAAACTGTTGTGCACTTGTCGAATCACATCTaGGTTACTCAATGCCAGCCCCTTCATAGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PGKTVVHLSNHI*VTQCQPLHSCI Trigger: GATGCAGCTATGAAGGGGCTGGCATTGAGTAACTCAGATGTGATTCGACAAGTGCACAACAGTTTTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
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| CDS TCA 72 bp | TCTATTACTGGCCTCACTGCAGTAATCCAGTCATCTTaGTTGCATGCACCTAAATCAATTGGGCCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SITGLTAVIQSS*LHAPKSIGPSL Trigger: AAGAGAGGGCCCAATTGATTTAGGTGCATGCAATCAAGATGACTGGATTACTGCAGTGAGGCCAGTAATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018333.13 ENSMUST00000185493.7 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS CCA 72 bp | GTAACTGACAAAGTGAAAAGCATCCTCCTCTTTGGCTaGTGTCTTTGTATCAAATTCAAACATCTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VTDKVKSILLFG*CLCIKFKHLLP Trigger: AGGCAGCAGATGTTTGAATTTGATACAAAGACACCAGCCAAAGAGGAGGATGCTTTTCACTTTGTCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018333.13 ENSMUST00000185493.7 ENSMUST00000189936.7 |
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| CDS CCA 72 bp | TCCTTCACTATACTTTTGAATCCTTTTCTCTATTACTaGCCTCACTGCAGTAATCCAGTCATCTTGATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFTILLNPFLYY*PHCSNPVILIA Trigger: TGCAATCAAGATGACTGGATTACTGCAGTGAGGCCAGTAATAGAGAAAAGGATTCAAAAGTATAGTGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018333.13 ENSMUST00000185493.7 ENSMUST00000185539.2 ENSMUST00000189936.7 |
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| CDS GCA 72 bp | TCTTTTGCCTTTTCCACAAGTGGAATTAACTGCTGGTaGTCAGCTAAGGTCTTTAACAATTCCATAATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SFAFSTSGINCW*SAKVFNNSIMK Trigger: TTTCATTATGGAATTGTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCCACTTGTGGAAAAGGCAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018333.13 ENSMUST00000189936.7 |
||
| CDS CCA 72 bp | CATGAGAATATCTTTTCCACAAGTGGAATTAACTGCTaGTGCTCAGCTAAGGTCTTTAACAATTCCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: HENIFSTSGINC*CSAKVFNNSIM Trigger: CATTATGGAATTGTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCCACTTGTGGAAAAGATATTCTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
||
| CDS GCA 72 bp | GAGAATATCTTTTCCACAAGTGGAATTAACTGCTGGTaGTCAGCTAAGGTCTTTAACAATTCCATAATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ENIFSTSGINCW*SAKVFNNSIMK Trigger: TTTCATTATGGAATTGTTAAAGACCTTAGCTGAGCACCAGCAGTTAATTCCACTTGTGGAAAAGATATTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185539.2 |
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