Pregenerated sensors for UCHL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035337Ensembl transcript IDs: ENSMUST00000039011.4
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTCTGTCTCCTGAGTACTGGGATTAAAGGTATACACCACCACTaGTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: CLCLLSTGIKGIHHH*WAILVLEHSFYNSF Trigger: GAAACTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATACCTTTAATCCCAGTACTCAGGAGACAGAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| 3UTR CCA 90 bp | CTCTGTCTCCTGAGTACTGGGATTAAAGGTATACACCACCACTGCTaGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LCLLSTGIKGIHHHC*AILVLEHSFYNSFF Trigger: AAAGAAACTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATACCTTTAATCCCAGTACTCAGGAGACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTAATACACCACCACTGCTaGGCTATTCTTGTACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: FRDRISLCSAGCPGTCFVIHHHC*AILVLE Trigger: TTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTAT...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CCA 90 bp | TGTCCTGGAACTTGCTTTGTAGACCAGGCTAGTCTAGAACTTGGAGAGCCACCTAGGGTTGGCCTCCAGTaGCAGCCAGCGTTGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: CPGTCFVDQASLELGEPPRVGLQ*QPALTL Trigger: GAGGGTCAACGCTGGCTGCCACTGGAGGCCAACCCT...AGGTGGCTCTCCAAGTTCTAGACTAGCCTGGTCTACAAAGCAAGTTCCAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR TCA 90 bp | TGTCCTGGAACTTGCTTTGTAGACCAGGCTAGTCTAGAACTTGGAGAGCCACCTCAGGGTCACGTTCCATaGACTTCTTGCAAACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: CPGTCFVDQASLELGEPPQGHVP*TSCKLL Trigger: TAAAAGTTTGCAAGAAGTTCATGGAACGTGACCCTG...AGGTGGCTCTCCAAGTTCTAGACTAGCCTGGTCTACAAAGCAAGTTCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR GCA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTAAACTGCCAGTTAGGATaGAGGCCTAATTGCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRDRISLCSAGCPGTCFVNCQLG*RPNCLR Trigger: TCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTT...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CCA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTATGCGCACACTGGTCTTaGTATGATGCTAAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: FRDRISLCSAGCPGTCFVCAHWS*YDAKKF Trigger: GAACTTCTTAGCATCATACCAAGACCAGTGTGCGCA...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR GCA 90 bp | TATACACCACCACTGCTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGGGATGCAGGCCTAATTaGTTGAGAAACTGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: YTPPLLGYSCTRTFLLQQGCRPN*LRNWLV Trigger: CACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCC...CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CCA 90 bp | TATACACCACCACTGCTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGAGTTCTCCAGGTATTTaGCTCTCTCTTCAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YTPPLLGYSCTRTFLLQQSSPGI*LSLQGS Trigger: TGAGCCCTGAAGAGAGAGCCAAATACCTGGAGAACT...CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CCA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTACTTTGTTGTTTGCAATaGCATGGATTAGTCCAATCG | + |
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Preference number: 4 (lower is better) Translates to: FRDRISLCSAGCPGTCFVLCCLQ*HGLVQS Trigger: CGATTGGACTAATCCATGCCATTGCAAACAACAAAG...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR TCA 90 bp | TATACACCACCACTGCTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGTCTTGCAAACTTTTATaGCATCCTCTAACAACGTCT | + |
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Preference number: 4 (lower is better) Translates to: YTPPLLGYSCTRTFLLQQSCKLL*HPLTTS Trigger: AGACGTTGTTAGAGGATGTCATAAAAGTTTGCAAGA...CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS GCA 90 bp | ATCCCGTACACATCAACAAACTGCCAGTTAGGATGCAGGCCTAATTaGTTGAGAAACTGGTTGGTGACCTCAGGGTTGGCCTCCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: IPYTSTNCQLGCRPN*LRNWLVTSGLASSG Trigger: GCCACTGGAGGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS GCA 90 bp | AGTTCAGACTCCATCCCGTACACATCAACAAACTGCCAGTTAGGATaGAGGCCTAATTGCTTGAGAAACTGGTTGGTGACCTCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSDSIPYTSTNCQLG*RPNCLRNWLVTSGL Trigger: CAACCCTGAGGTCACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGGATGGAGTCTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CCA 90 bp | GACCCTGATTCAAAGTGCACCTTGTCTTTGTTGTTTGCAATGGCATaGATTAGTCCAATCGTTCCAATCGTTCCACAGGCATTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: DPDSKCTLSLLFAMA*ISPIVPIVPQALLM Trigger: CATCAGCAATGCCTGTGGAACGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CAA 90 bp | TGTCCTGGAACTTGCTTTGTAGACCAGGCTAGTCTAGAACTTGGAGAGCCACCTGATTCAAAGTGCACCTaGTCTTTGTTGTTTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: CPGTCFVDQASLELGEPPDSKCT*SLLFAM Trigger: CATTGCAAACAACAAAGACAAGGTGCACTTTGAATC...AGGTGGCTCTCCAAGTTCTAGACTAGCCTGGTCTACAAAGCAAGTTCCAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CCA 90 bp | ATGTTGACCCTGATTCAAAGTGCACCTTGTCTTTGTTGTTTGCAATaGCATGGATTAGTCCAATCGTTCCAATCGTTCCACAGGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: MLTLIQSAPCLCCLQ*HGLVQSFQSFHRHC Trigger: GCAATGCCTGTGGAACGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAGGGTCAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CAA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTACCTTGTCTTTGTTGTTaGCAATGGCATGGATTAGTC | + |
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Preference number: 5 (lower is better) Translates to: FRDRISLCSAGCPGTCFVPCLCC*QWHGLV Trigger: GACTAATCCATGCCATTGCAAACAACAAAGACAAGG...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CAA 90 bp | TTTCGAGATAGGATTTCTCTATGCAGCGCTGGCTGTCCTGGAACTTGCTTTGTATGCACCTTGTCTTTGTaGTTTGCAATGGCATGGATT | + |
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Preference number: 5 (lower is better) Translates to: FRDRISLCSAGCPGTCFVCTLSL*FAMAWI Trigger: AATCCATGCCATTGCAAACAACAAAGACAAGGTGCA...TACAAAGCAAGTTCCAGGACAGCCAGCGCTGCATAGAGAAATCCTATCTCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CAA 90 bp | TATACACCACCACTGCTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGAAGTGCACCTTGTCTTaGTTGTTTGCAATGGCATGG | + |
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Preference number: 5 (lower is better) Translates to: YTPPLLGYSCTRTFLLQQKCTLS*LFAMAW Trigger: CCATGCCATTGCAAACAACAAAGACAAGGTGCACTT...CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS-3UTR CAA 90 bp | TATACACCACCACTGCTGGGCTATTCTTGTACTAGAACATTCCTTCTACAACAGCGTTCCATGAACTTCTaGCAAACTTTTATGACATCC | + |
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Preference number: 5 (lower is better) Translates to: YTPPLLGYSCTRTFLLQQRSMNF*QTFMTS Trigger: GGATGTCATAAAAGTTTGCAAGAAGTTCATGGAACG...CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 72 bp | TCAACAAACTGCCAGTTAGGATGCAGGCCTAATTGCTaGAGAAACTGGTTGGTGACCTCAGGGTTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: STNCQLGCRPNC*RNWLVTSGLAS Trigger: GGAGGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTTTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS GCA 72 bp | ACATCAACAAACTGCCAGTTAGGATGCAGGCCTAATTaGTTGAGAAACTGGTTGGTGACCTCAGGGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSTNCQLGCRPN*LRNWLVTSGLA Trigger: GGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS GCA 72 bp | TCCATCCCGTACACATCAACAAACTGCCAGTTAGGATaGAGGCCTAATTGCTTGAGAAACTGGTTGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: SIPYTSTNCQLG*RPNCLRNWLVT Trigger: GGTCACCAACCAGTTTCTCAAGCAATTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CCA 72 bp | TCAAAGTGCACCTTGTCTTTGTTGTTTGCAATGGCATaGATTAGTCCAATCGTTCCAATCGTTCCACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SKCTLSLLFAMA*ISPIVPIVPQA Trigger: TGCCTGTGGAACGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 72 bp | AGTTCTCCAGGTATTTGGCTCTCTCTTCAGGGCTCATaGATACAGACTCCTCCAGGAACTTTTTCAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSPGIWLSLQGS*IQTPPGTFSML Trigger: CAACATTGAAAAAGTTCCTGGAGGAGTCTGTATCAATGAGCCCTGAAGAGAGAGCCAAATACCTGGAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CCA 72 bp | CTGATTCAAAGTGCACCTTGTCTTTGTTGTTTGCAATaGCATGGATTAGTCCAATCGTTCCAATCGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LIQSAPCLCCLQ*HGLVQSFQSFH Trigger: GTGGAACGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 72 bp | TTGACCCTGATTCAAAGTGCACCTTGTCTTTGTTGTTaGCAATGGCATGGATTAGTCCAATCGTTCCAATCG | + |
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Preference number: 6 (lower is better) Translates to: LTLIQSAPCLCC*QWHGLVQSFQS Trigger: CGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAGGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 90 bp | GCAATGGCATGGATTAGTCCAATCGTTCCAATCGTTCCACAGGCATaGCTGATGGTTTGTTTCATAAAATATACTGATGATGTCACATCT | + |
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Preference number: 6 (lower is better) Translates to: AMAWISPIVPIVPQA*LMVCFIKYTDDVTS Trigger: AGATGTGACATCATCAGTATATTTTATGAAACAAACCATCAGCAATGCCTGTGGAACGATTGGAACGATTGGACTAATCCATGCCATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 90 bp | AGGAACTTTTTCAATGTTGACCCTGATTCAAAGTGCACCTTGTCTTaGTTGTTTGCAATGGCATGGATTAGTCCAATCGTTCCAATCGTT | + |
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Preference number: 6 (lower is better) Translates to: RNFFNVDPDSKCTLS*LFAMAWISPIVPIV Trigger: AACGATTGGAACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAGGGTCAACATTGAAAAAGTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 72 bp | TTCAATGTTGACCCTGATTCAAAGTGCACCTTGTCTTaGTTGTTTGCAATGGCATGGATTAGTCCAATCGTT | + |
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Preference number: 6 (lower is better) Translates to: FNVDPDSKCTLS*LFAMAWISPIV Trigger: AACGATTGGACTAATCCATGCCATTGCAAACAACAAAGACAAGGTGCACTTTGAATCAGGGTCAACATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CCA 72 bp | ACATCCTCTAACAACGTCTCATCGCTAGTTTTCCCATaGTTAATTGGAAATGGTTTCCATCCATCTAATTCA | + |
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Preference number: 6 (lower is better) Translates to: TSSNNVSSLVFP*LIGNGFHPSNS Trigger: TGAATTAGATGGATGGAAACCATTTCCAATTAACCATGGGAAAACTAGCGATGAGACGTTGTTAGAGGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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| CDS CAA 90 bp | ATTGCATTAAATCTTAACTCATCAGGGTCACGTTCCATGAACTTCTaGCAAACTTTTATGACATCCTCTAACAACGTCTCATCGCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: IALNLNSSGSRSMNF*QTFMTSSNNVSSLV Trigger: AACTAGCGATGAGACGTTGTTAGAGGATGTCATAAAAGTTTGCAAGAAGTTCATGGAACGTGACCCTGATGAGTTAAGATTTAATGCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039011.4 |
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