RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UCHL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022111

Ensembl transcript IDs: ENSMUST00000002289.8, ENSMUST00000226340.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAAGGGTCGCCAGCGACGAAGACGGAGAGATGGACTGGTAGCCTTTaGAGGGCCTACATGGTTACGTTTGCCCCAGGGCAGGGATGCATG +
Preference number: 5 (lower is better)
Translates to: EGSPATKTERWTGSL*RAYMVTFAPGQGCM
Trigger: CATGCATCCCTGCCCTGGGGCAAACGTAACCATGTAGGCCCTGCAAAGGCTACCAGTCCATCTCTCCGTCTTCGTCGCTGGCGACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226340.2
CDS GCA 90 bp ATTCCGTACACATCAACAAACTGCCAGTTAGGATGCAGGCCTAACTaGTTGAGAAACTGGTTGGTGACCTCAGGGTTGGCCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: IPYTSTNCQLGCRPN*LRNWLVTSGLASSG
Trigger: GCCGCTGGAGGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS GCA 90 bp AGTTCAGGCTCCATTCCGTACACATCAACAAACTGCCAGTTAGGATaGAGGCCTAACTGCTTGAGAAACTGGTTGGTGACCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: SSGSIPYTSTNCQLG*RPNCLRNWLVTSGL
Trigger: CAACCCTGAGGTCACCAACCAGTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGAATGGAGCCTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS CCA 90 bp GACCCTGATTCGAAGTGCATCTTGTCTTTGTTGTTCGCAATGGCATaGATTAGTCCAATCGTTCCACAGGCATTGCTGATGGTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: DPDSKCILSLLFAMA*ISPIVPQALLMVCF
Trigger: GAAACAAACCATCAGCAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS GCA 72 bp CCAGCGACGAAGACGGAGAGATGGACTGGTAGCCTTTaGAGGGCCTACATGGTTACGTTTGCCCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: PATKTERWTGSL*RAYMVTFAPGQ
Trigger: CTGCCCTGGGGCAAACGTAACCATGTAGGCCCTGCAAAGGCTACCAGTCCATCTCTCCGTCTTCGTCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226340.2
CDS TCA 72 bp ACATGGTTACGTTTGCCCCAGGGCAGGGATGCATGGTaGCACAATGATGAGGCCTTCGCTCTGCAGTGGCTA +
Preference number: 6 (lower is better)
Translates to: TWLRLPQGRDAW*HNDEAFALQWL
Trigger: TAGCCACTGCAGAGCGAAGGCCTCATCATTGTGTCACCATGCATCCCTGCCCTGGGGCAAACGTAACCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226340.2
CDS CAA 72 bp TCAACAAACTGCCAGTTAGGATGCAGGCCTAACTGCTaGAGAAACTGGTTGGTGACCTCAGGGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: STNCQLGCRPNC*RNWLVTSGLAS
Trigger: GGAGGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS GCA 72 bp ACATCAACAAACTGCCAGTTAGGATGCAGGCCTAACTaGTTGAGAAACTGGTTGGTGACCTCAGGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: TSTNCQLGCRPN*LRNWLVTSGLA
Trigger: GGCCAACCCTGAGGTCACCAACCAGTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS GCA 72 bp TCCATTCCGTACACATCAACAAACTGCCAGTTAGGATaGAGGCCTAACTGCTTGAGAAACTGGTTGGTGACC +
Preference number: 6 (lower is better)
Translates to: SIPYTSTNCQLG*RPNCLRNWLVT
Trigger: GGTCACCAACCAGTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS GCA 72 bp AGAAGTTCAGGCTCCATTCCGTACACATCAACAAACTaGCAGTTAGGATGCAGGCCTAACTGCTTGAGAAAC +
Preference number: 6 (lower is better)
Translates to: RSSGSIPYTSTN*QLGCRPNCLRN
Trigger: GTTTCTCAAGCAGTTAGGCCTGCATCCTAACTGGCAGTTTGTTGATGTGTACGGAATGGAGCCTGAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002289.8
CDS CCA 72 bp TCGAAGTGCATCTTGTCTTTGTTGTTCGCAATGGCATaGATTAGTCCAATCGTTCCACAGGCATTGCTGATG +
Preference number: 6 (lower is better)
Translates to: SKCILSLLFAMA*ISPIVPQALLM
Trigger: CATCAGCAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp AGTTCTCCAGGAATTTGGCTCTCTCTTCAGGGCTCATaGATACAGACTCCTCCAGGAACTTTTTCAATGTTG +
Preference number: 6 (lower is better)
Translates to: SSPGIWLSLQGS*IQTPPGTFSML
Trigger: CAACATTGAAAAAGTTCCTGGAGGAGTCTGTATCAATGAGCCCTGAAGAGAGAGCCAAATTCCTGGAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 90 bp AGGAACTTTTTCAATGTTGACCCTGATTCGAAGTGCATCTTGTCTTaGTTGTTCGCAATGGCATGGATTAGTCCAATCGTTCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: RNFFNVDPDSKCILS*LFAMAWISPIVPQA
Trigger: TGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 90 bp TCCTCCAGGAACTTTTTCAATGTTGACCCTGATTCGAAGTGCATCTaGTCTTTGTTGTTCGCAATGGCATGGATTAGTCCAATCGTTCCA +
Preference number: 6 (lower is better)
Translates to: SSRNFFNVDPDSKCI*SLLFAMAWISPIVP
Trigger: TGGAACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTTCCTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp AATCTTAACTCATCAGGGTCGCGTTCCATGAACTTCTaGCAAACTTCTATGGCATCCTCTAACAACGTCTCA +
Preference number: 6 (lower is better)
Translates to: NLNSSGSRSMNF*QTSMASSNNVS
Trigger: TGAGACGTTGTTAGAGGATGCCATAGAAGTTTGCAAGAAGTTCATGGAACGCGACCCTGATGAGTTAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 90 bp AACTTTTTCAATGTTGACCCTGATTCGAAGTGCATCTTGTCTTTGTaGTTCGCAATGGCATGGATTAGTCCAATCGTTCCACAGGCATTG +
Preference number: 6 (lower is better)
Translates to: NFFNVDPDSKCILSL*FAMAWISPIVPQAL
Trigger: CAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS GCA 72 bp TCCAGGAACTTTTTCAATGTTGACCCTGATTCGAAGTaGATCTTGTCTTTGTTGTTCGCAATGGCATGGATT +
Preference number: 6 (lower is better)
Translates to: SRNFFNVDPDSK*ILSLLFAMAWI
Trigger: AATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTTCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp TTCAATGTTGACCCTGATTCGAAGTGCATCTTGTCTTaGTTGTTCGCAATGGCATGGATTAGTCCAATCGTT +
Preference number: 6 (lower is better)
Translates to: FNVDPDSKCILS*LFAMAWISPIV
Trigger: AACGATTGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 90 bp ATTGCATTAAATCTTAACTCATCAGGGTCGCGTTCCATGAACTTCTaGCAAACTTCTATGGCATCCTCTAACAACGTCTCATCACTAGTT +
Preference number: 6 (lower is better)
Translates to: IALNLNSSGSRSMNF*QTSMASSNNVSSLV
Trigger: AACTAGTGATGAGACGTTGTTAGAGGATGCCATAGAAGTTTGCAAGAAGTTCATGGAACGCGACCCTGATGAGTTAAGATTTAATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CCA 72 bp GCATCCTCTAACAACGTCTCATCACTAGTTTTCCCATaGTTAATTGGAAATGGTTTCCGTCCATCTAATTCA +
Preference number: 6 (lower is better)
Translates to: ASSNNVSSLVFP*LIGNGFRPSNS
Trigger: TGAATTAGATGGACGGAAACCATTTCCAATTAACCATGGGAAAACTAGTGATGAGACGTTGTTAGAGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp AACTTTTTCAATGTTGACCCTGATTCGAAGTGCATCTaGTCTTTGTTGTTCGCAATGGCATGGATTAGTCCA +
Preference number: 6 (lower is better)
Translates to: NFFNVDPDSKCI*SLLFAMAWISP
Trigger: TGGACTAATCCATGCCATTGCGAACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp TCATTGATACAGACTCCTCCAGGAACTTTTTCAATGTaGACCCTGATTCGAAGTGCATCTTGTCTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: SLIQTPPGTFSM*TLIRSASCLCC
Trigger: ACAACAAAGACAAGATGCACTTCGAATCAGGGTCAACATTGAAAAAGTTCCTGGAGGAGTCTGTATCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 90 bp TTGTTGTTCGCAATGGCATGGATTAGTCCAATCGTTCCACAGGCATaGCTGATGGTTTGTTTCATAAAATATACTGATGATGTCACATCT +
Preference number: 6 (lower is better)
Translates to: LLFAMAWISPIVPQA*LMVCFIKYTDDVTS
Trigger: AGATGTGACATCATCAGTATATTTTATGAAACAAACCATCAGCAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAACAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2
CDS CAA 72 bp GCAATGGCATGGATTAGTCCAATCGTTCCACAGGCATaGCTGATGGTTTGTTTCATAAAATATACTGATGAT +
Preference number: 6 (lower is better)
Translates to: AMAWISPIVPQA*LMVCFIKYTDD
Trigger: ATCATCAGTATATTTTATGAAACAAACCATCAGCAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002289.8
ENSMUST00000226340.2