Pregenerated sensors for UCHL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029223Ensembl transcript IDs: ENSMUST00000031131.11
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGAGACCGTAGAGAGCAAGGTACGAGACACACAGGAGGGAAAGTaGTCAGCCTGGTGTGGCTGTGACAGAGCCCCCTGGTGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KETVESKVRDTQEGK*SAWCGCDRAPWWPG Trigger: CCCAGGCCACCAGGGGGCTCTGTCACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTCTACGGTCTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| 3UTR-3UTR CCA 90 bp | ACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTGTGACAGAGCCCCCTaGTGGCCTGGGTGGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: TRQTTSRAVTYRQKPKRPCDRAP*WPGWGG Trigger: TCCACCCCACCCAGGCCACCAGGGGGCTCTGTCACA...CGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| 3UTR-3UTR CCA 90 bp | TTATTCTTCCTCTTAAGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGAGACAGAGCCCCCTGGTaGCCTGGGTGGGGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFFLLRTRQTTSRAVTYRDRAPW*PGWGGG Trigger: CCCTCCACCCCACCCAGGCCACCAGGGGGCTCTGTC...TCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCTTAAGAGGAAGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| 3UTR-3UTR GCA 90 bp | AGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGAACACAGGAGGGAAAGTaGTCAGCCTGGTGTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RTRQTTSRAVTYRQKPKRTQEGK*SAWCGC Trigger: ACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGT...TCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| 3UTR CCA 72 bp | AAGGTACGAGACACACAGGAGGGAAAGTGCTCAGCCTaGTGTGGCTGTGACAGAGCCCCCTGGTGGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: KVRDTQEGKCSA*CGCDRAPWWPG Trigger: CCCAGGCCACCAGGGGGCTCTGTCACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| 3UTR GCA 72 bp | GTAGAGAGCAAGGTACGAGACACACAGGAGGGAAAGTaGTCAGCCTGGTGTGGCTGTGACAGAGCCCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VESKVRDTQEGK*SAWCGCDRAPW Trigger: CCAGGGGGCTCTGTCACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR TCA 90 bp | GAGAGCAAGGTACGAGACACACAGGAGGGAAAGTGCTCAGCCTGGTGTGGCTGTGGCAGGGGATGGCACTaGGCCCAGAGTCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ESKVRDTQEGKCSAWCGCGRGWH*AQSLLL Trigger: GAGGAGGAGACTCTGGGCTCAGTGCCATCCCCTGCC...ACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | GAAAGTGCTCAGCCTGGTGTGGCTGTGACAGAGCCCCCTGGTGGCCTGGGTGGGGCTTGTCTTGGTTGTTaGCCACTGCGTGGATCAACC | + |
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Preference number: 4 (lower is better) Translates to: ESAQPGVAVTEPPGGLGGACLGC*PLRGST Trigger: GGTTGATCCACGCAGTGGCCAACAACCAAGACAAGC...CCCACCCAGGCCACCAGGGGGCTCTGTCACAGCCACACCAGGCTGAGCACTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR TCA 90 bp | GAGAGCAAGGTACGAGACACACAGGAGGGAAAGTGCTCAGCCTGGTGTGGCTGTCCTGCTCGCGCTCAGTaGATTCTCTGCAGACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESKVRDTQEGKCSAWCGCPARAQ*ILCRPW Trigger: CCAAGGTCTGCAGAGAATTCACTGAGCGCGAGCAGG...ACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | ACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTCGGCGAAGCGCCACTaGCCGGCGACCCCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TRQTTSRAVTYRQKPKRPSAKRH*PATPSL Trigger: CAAGCTGGGGGTCGCCGGCCAGTGGCGCTTCGCCGA...CGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR TCA 90 bp | CACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTAGAGAGCAAGCAGCAGAGAGTCCTCTaGGCTGGCGCCATGGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: HIQGRNLQTETKETVESKQQRVL*AGAMVH Trigger: GTGAACCATGGCGCCAGCTCAGAGGACTCTCTGCTG...CTTGCTCTCTACGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | ACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTCATCTACCCGACACTaGCCCTCCTGGGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRQTTSRAVTYRQKPKRPSSTRH*PSWATE Trigger: CTCCGTGGCCCAGGAGGGCCAGTGTCGGGTAGATGA...CGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR GCA 90 bp | CACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTAGAGAGCAAGACCTTGGCAGCATCCTaGAGCAGAGAGTCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HIQGRNLQTETKETVESKTLAAS*SRESSE Trigger: CTCAGAGGACTCTCTGCTGCAGGATGCTGCCAAGGT...CTTGCTCTCTACGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | AAAGTTTTATTCTTCCTCTTAAGGACTAGACAAACCACATCCAGGGCCGTAACTCGGCGACCCCCAGCTTaGCCAACACTTTGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KVLFFLLRTRQTTSRAVTRRPPA*PTLCSA Trigger: TGCTGAACAAAGTGTTGGCCAAGCTGGGGGTCGCCG...AGTTACGGCCCTGGATGTGGTTTGTCTAGTCCTTAAGAGGAAGAATAAAACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | AAAGTTTTATTCTTCCTCTTAAGGACTAGACAAACCACATCCAGGGCCGTAACTGGCGCCATGGTTCACTaGAAAGGGCATTCGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: KVLFFLLRTRQTTSRAVTGAMVH*KGHSPI Trigger: GATGGGCGAATGCCCTTTCCAGTGAACCATGGCGCC...AGTTACGGCCCTGGATGTGGTTTGTCTAGTCCTTAAGAGGAAGAATAAAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR TCA 90 bp | AGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACAATTTGCTTTTTCCTaGAGTTTTCATGCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RTRQTTSRAVTYRQKPKRQFAFS*SFHAGP Trigger: CGGCCCAGCATGAAAACTTCAGGAAAAAGCAAATTG...TCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR GCA 90 bp | TTATTCTTCCTCTTAAGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGATTCCTGAAGTTTTCATaGTGGGCCGTGAGGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: LFFLLRTRQTTSRAVTYRFLKFS*WAVRGN Trigger: GTTTCCCCTCACGGCCCAGCATGAAAACTTCAGGAA...TCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCTTAAGAGGAAGAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CCA 90 bp | TTATTCTTCCTCTTAAGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGAAATTCCAGCTTGTCTTaGTTGTTGGCCACTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LFFLLRTRQTTSRAVTYRNSSLS*LLATAW Trigger: CCACGCAGTGGCCAACAACCAAGACAAGCTGGAATT...TCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCTTAAGAGGAAGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS CCA 90 bp | ACTTTGTCATCTACCCGACACTGGCCCTCCTGGGCCACGGAGTCATaGGCCGCCTGGATGGCCTCGTTCTTCTCGAAACACTTGGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TLSSTRHWPSWATES*AAWMASFFSKHLAL Trigger: TAGAGCCAAGTGTTTCGAGAAGAACGAGGCCATCCAGGCGGCCCATGACTCCGTGGCCCAGGAGGGCCAGTGTCGGGTAGATGACAAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | GAAAGTGCTCAGCCTGGTGTGGCTGTGACAGAGCCCCCTGGTGGCCTGGGTGGGAGATGGCCGTCCACGTaGTTGAACAGAATAAAATGG | + |
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Preference number: 5 (lower is better) Translates to: ESAQPGVAVTEPPGGLGGRWPST*LNRIKW Trigger: CCATTTTATTCTGTTCAACAACGTGGACGGCCATCT...CCCACCCAGGCCACCAGGGGGCTCTGTCACAGCCACACCAGGCTGAGCACTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | GAGAGCAAGGTACGAGACACACAGGAGGGAAAGTGCTCAGCCTGGTGTGGCTGTAAATTCCAGCTTGTCTaGGTTGTTGGCCACTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: ESKVRDTQEGKCSAWCGCKFQLV*VVGHCV Trigger: CACGCAGTGGCCAACAACCAAGACAAGCTGGAATTT...ACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | CACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTAGAGAGCAAGTCCAGCTTGTCTTGGTaGTTGGCCACTGCGTGGATC | + |
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Preference number: 5 (lower is better) Translates to: HIQGRNLQTETKETVESKSSLSW*LATAWI Trigger: GATCCACGCAGTGGCCAACAACCAAGACAAGCTGGA...CTTGCTCTCTACGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | CACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGACCGTAGAGAGCAAGAGCTTGTCTTGGTTGTaGGCCACTGCGTGGATCAAC | + |
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Preference number: 5 (lower is better) Translates to: HIQGRNLQTETKETVESKSLSWL*ATAWIN Trigger: GTTGATCCACGCAGTGGCCAACAACCAAGACAAGCT...CTTGCTCTCTACGGTCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | GAGAGCAAGGTACGAGACACACAGGAGGGAAAGTGCTCAGCCTGGTGTGGCTGTAAATGGAAATTCACTTaGTCATCTACCCGACACTGG | + |
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Preference number: 5 (lower is better) Translates to: ESKVRDTQEGKCSAWCGCKWKFT*SSTRHW Trigger: CCAGTGTCGGGTAGATGACAAAGTGAATTTCCATTT...ACAGCCACACCAGGCTGAGCACTTTCCCTCCTGTGTGTCTCGTACCTTGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS-3UTR CAA 90 bp | AGGACTAGACAAACCACATCCAGGGCCGTAACTTACAGACAGAAACCAAAGAGAAATTCTCTGCAGACCTaGGCAGCATCCTGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RTRQTTSRAVTYRQKPKRNSLQT*AASCSR Trigger: TCTGCTGCAGGATGCTGCCAAGGTCTGCAGAGAATT...TCTCTTTGGTTTCTGTCTGTAAGTTACGGCCCTGGATGTGGTTTGTCTAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS CAA 72 bp | AGGACGGATCCATCCTCAAATTCCAGCTTGTCTTGGTaGTTGGCCACTGCGTGGATCAACCCGATGGTACCA | + |
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Preference number: 6 (lower is better) Translates to: RTDPSSNSSLSW*LATAWINPMVP Trigger: TGGTACCATCGGGTTGATCCACGCAGTGGCCAACAACCAAGACAAGCTGGAATTTGAGGATGGATCCGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS CCA 72 bp | TTCAGGACGGATCCATCCTCAAATTCCAGCTTGTCTTaGTTGTTGGCCACTGCGTGGATCAACCCGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: FRTDPSSNSSLS*LLATAWINPMV Trigger: TACCATCGGGTTGATCCACGCAGTGGCCAACAACCAAGACAAGCTGGAATTTGAGGATGGATCCGTCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS CAA 72 bp | TTTCAGGACGGATCCATCCTCAAATTCCAGCTTGTCTaGGTTGTTGGCCACTGCGTGGATCAACCCGATGGT | + |
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Preference number: 6 (lower is better) Translates to: FQDGSILKFQLV*VVGHCVDQPDG Trigger: ACCATCGGGTTGATCCACGCAGTGGCCAACAACCAAGACAAGCTGGAATTTGAGGATGGATCCGTCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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| CDS CAA 90 bp | AACTGTTTCAGGACGGATCCATCCTCAAATTCCAGCTTGTCTTGGTaGTTGGCCACTGCGTGGATCAACCCGATGGTACCACAGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: NCFRTDPSSNSSLSW*LATAWINPMVPQEF Trigger: AAACTCCTGTGGTACCATCGGGTTGATCCACGCAGTGGCCAACAACCAAGACAAGCTGGAATTTGAGGATGGATCCGTCCTGAAACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031131.11 |
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