Pregenerated sensors for UBXN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019578Ensembl transcript IDs: ENSMUST00000019722.12, ENSMUST00000139371.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTGGGCCTTAATCACAGCACTTGCTGTGGGCAAACATCTGCTATaGATTGTGCTAGGGATGATGTGGCTGCTGTGCAGGCCCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: AWALITALAVGKHLL*IVLGMMWLLCRPWA Trigger: TGCCCAGGGCCTGCACAGCAGCCACATCATCCCTAGCACAATTCATAGCAGATGTTTGCCCACAGCAAGTGCTGTGATTAAGGCCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 90 bp | CTACTGTCCTTCCTATTGCTGGGGACTCAGGGAAAGGAATGGGTTTaGGAACAGCATGAGACTGGAGCCACAGTGGGCCAAGCCTGCATT | + |
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Preference number: 1 (lower is better) Translates to: LLSFLLLGTQGKEWV*EQHETGATVGQACI Trigger: AATGCAGGCTTGGCCCACTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAGTCCCCAGCAATAGGAAGGACAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 90 bp | CCCTTGCAGCCCACAGAGGAGGTAGGACCTTGTCTCCAACTCTACTaGTACTACTGTCCTTCCTATTGCTGGGGACTCAGGGAAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: PLQPTEEVGPCLQLY*YYCPSYCWGLRERN Trigger: ATTCCTTTCCCTGAGTCCCCAGCAATAGGAAGGACAGTAGTAGCAGTAGAGTTGGAGACAAGGTCCTACCTCCTCTGTGGGCTGCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 90 bp | GCCTGTTTATTTGGGGTTTATAACTTAGGAATTACAGCTCCATGCTaGCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: ACLFGVYNLGITAPC*QLSPSTACVHSTCA Trigger: AGCACAGGTGGAATGCACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAGCTGTAATTCCTAAGTTATAAACCCCAAATAAACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 90 bp | CTCATGATAAAGAGCACTTTGTCCTACATTCCTAGGTCTGGAGTCTaGGGGAGGCCTGGACAGCTACTTCCAAATTGTAAAGACTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LMIKSTLSYIPRSGV*GRPGQLLPNCKDSG Trigger: CCCAGAGTCTTTACAATTTGGAAGTAGCTGTCCAGGCCTCCCCCAGACTCCAGACCTAGGAATGTAGGACAAAGTGCTCTTTATCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 90 bp | ATAGCCTGTTTATTTGGGGTTTATAACTTAGGAATTACAGCTCCATaGTGCCAGCTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGT | + |
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Preference number: 1 (lower is better) Translates to: IACLFGVYNLGITAP*CQLSPSTACVHSTC Trigger: ACAGGTGGAATGCACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAGCTGTAATTCCTAAGTTATAAACCCCAAATAAACAGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 90 bp | AGAAACACCCAGGGACCTCAGAATGATACTAAAGCTACAGTTGGTTaGTTGACTTATAGGACAGATTCATACTGCCAGCCCTTCAACGGC | + |
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Preference number: 1 (lower is better) Translates to: RNTQGPQNDTKATVG*LTYRTDSYCQPFNG Trigger: GCCGTTGAAGGGCTGGCAGTATGAATCTGTCCTATAAGTCAACCAACCAACTGTAGCTTTAGTATCATTCTGAGGTCCCTGGGTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 90 bp | CAGTGTAGACAGTTTCACCAGGAATTACTGTCCAGTACAGTATGTTaGGGGTGGTGGTACATGGTCAACATGCTGACAGGCTGTATTTTG | + |
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Preference number: 1 (lower is better) Translates to: QCRQFHQELLSSTVC*GWWYMVNMLTGCIL Trigger: CAAAATACAGCCTGTCAGCATGTTGACCATGTACCACCACCCCCAACATACTGTACTGGACAGTAATTCCTGGTGAAACTGTCTACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR TCA 90 bp | GTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCCTCAGCCTTGTGCTCCCTGCAGCATCTaGCTAGCAACCACCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: VGSRHVLGSGGCASPQPCAPCSI*LATTRV Trigger: CACTCTGGTGGTTGCTAGTCAGATGCTGCAGGGAGC...ACAAGGCTGAGGGGAAGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGCTTCCCCTCAGCCTTGTAGAGCTGCTGAGGGAGATGGGAATGGAGACCCTGCTGTGCAGGCCCTaGGCAAATGTGGACATGTAT | + |
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Preference number: 2 (lower is better) Translates to: AVLPLSLVELLREMGMETLLCRP*ANVDMY Trigger: ATACATGTCCACATTTGCCCAGGGCCTGCACAGCAG...GGTCTCCATTCCCATCTCCCTCAGCAGCTCTACAAGGCTGAGGGGAAGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCTCCCACACTTTGCAAGTGACAGGTGTCAAGTTGAAAGACCTGGGGGAACCTAGGTCTGGAGTCTaGGGGAGGCCTGGACAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TCSHTLQVTGVKLKDLGEPRSGV*GRPGQL Trigger: TAGCTGTCCAGGCCTCCCCCAGACTCCAGACCTAGG...TTCCCCCAGGTCTTTCAACTTGACACCTGTCACTTGCAAAGTGTGGGAGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 90 bp | ACCACCAGAGTGAGCCTCCTGCTGACTCTCATGATAAAGAGCACTTaGTCCTACATTCCTAGGTCTGGAGTCTGGGGGAGGCCTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TTRVSLLLTLMIKST*SYIPRSGVWGRPGQ Trigger: CTGTCCAGGCCTCCCCCAGACTCCAGACCTAGGAATGTAGGACAAAGTGCTCTTTATCATGAGAGTCAGCAGGAGGCTCACTCTGGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 90 bp | TGTTGGGGGTGGTGGTACATGGTCAACATGCTGACAGGCTGTATTTaGCACAGGTTGGGTCTGGGGACATGGATGGCTTCCAGGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: CWGWWYMVNMLTGCI*HRLGLGTWMASRQT Trigger: TGTCTGCCTGGAAGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATGTACCACCACCCCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCTCCCACACTTTGCAAGTGACAGGTGTCAAGTTGAAAGACCTGGGGGAAGGTTTGGGAACAGCATaGGACTGGAGCCACAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TCSHTLQVTGVKLKDLGEGLGTA*DWSHSG Trigger: CCCACTGTGGCTCCAGTCTCATGCTGTTCCCAAACC...TTCCCCCAGGTCTTTCAACTTGACACCTGTCACTTGCAAAGTGTGGGAGCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 90 bp | TGGTGGTACATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTaGGGTCTGGGGACATGGATGGCTTCCAGGCAGACACAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WWYMVNMLTGCILHR*GLGTWMASRQTQKR Trigger: CCTCTTCTGTGTCTGCCTGGAAGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATGTACCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGCATTCCACCTGTGCTaGACTCCAAGATGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: HGQHADRLYFAQVGSGDMAFHLC*TPRWHQ Trigger: CTGGTGCCATCTTGGAGTGCAGCACAGGTGGAATGC...CATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR GCA 90 bp | GATGGCTTCCAGGCAGACACAGAAGAGGATGAAGAGGATGACACAGACTGTATGATGATGTGGCTGCTGTaGAGGCCCTGGGCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: DGFQADTEEDEEDDTDCMMMWLL*RPWANV Trigger: CACATTTGCCCAGGGCCTGCACAGCAGCCACATCAT...CATACAGTCTGTGTCATCCTCTTCATCCTCTTCTGTGTCTGCCTGGAAGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR GCA 90 bp | AACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGCTATTACAGCTCCATGCTaGCAGCTGTCTCCATCCACA | + |
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Preference number: 2 (lower is better) Translates to: NMLTGCILHRLGLGTWMAITAPC*QLSPST Trigger: TGTGGATGGAGACAGCTGGCAGCATGGAGCTGTAAT...AGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR GCA 90 bp | GTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCCTCAGCCTTGTATCATATTACACTGGTaGATGTCCTTCCACTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VGSRHVLGSGGCASPQPCIILHW*MSFHLS Trigger: GGACAAGTGGAAGGACATGCACCAGTGTAATATGAT...ACAAGGCTGAGGGGAAGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | AATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCAATTGTAGTAGGCATGTTCTaGGCAGTGGAGGCTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NLKSRSHSGCCGVLPLAIVVGMF*AVEAVL Trigger: AAGCACAGCCTCCACTGCCCAGAACATGCCTACTAC...AATTGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR GCA 90 bp | GATGGCTTCCAGGCAGACACAGAAGAGGATGAAGAGGATGACACAGACTGTATGAGGACAGATTCATACTaGCAGCCCTTCAACGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DGFQADTEEDEEDDTDCMRTDSY*QPFNGH Trigger: ATGGCCGTTGAAGGGCTGGCAGTATGAATCTGTCCT...CATACAGTCTGTGTCATCCTCTTCATCCTCTTCTGTGTCTGCCTGGAAGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | GTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGGAAAGGAATGGGTTTaGGAACAGCATGAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: VNMLTGCILHRLGLGTWMGKEWV*EQHETG Trigger: TCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCC...CATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | AATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCAATTTGTCCTTCCTATTGCTaGGGACTCAGGGAAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: NLKSRSHSGCCGVLPLAICPSYC*GLRERN Trigger: ATTCCTTTCCCTGAGTCCCCAGCAATAGGAAGGACA...AATTGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGTCACAGCACTTGCTGTaGGCAAACATCTGCTATGAA | + |
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Preference number: 2 (lower is better) Translates to: MVNMLTGCILHRLGLGTWSQHLL*ANICYE Trigger: TTCATAGCAGATGTTTGCCCACAGCAAGTGCTGTGA...CCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | GATGGCTTCCAGGCAGACACAGAAGAGGATGAAGAGGATGACACAGACTGTATGGGCCCTGGGCAAATGTaGACATGTATAAACATACTC | + |
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Preference number: 2 (lower is better) Translates to: DGFQADTEEDEEDDTDCMGPGQM*TCINIL Trigger: GAGTATGTTTATACATGTCCACATTTGCCCAGGGCC...CATACAGTCTGTGTCATCCTCTTCATCCTCTTCTGTGTCTGCCTGGAAGCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGACAGACCAAGAAAGTGCATGTTCAGTTGGTTATCTGAATCTAAAGTCGCCCTTCAACGGCCATaGTGCTATGGCTCTGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KKDRPRKCMFSWLSESKVALQRP*CYGSDE Trigger: TTCATCAGAGCCATAGCACCATGGCCGTTGAAGGGC...GACTTTAGATTCAGATAACCAACTGAACATGCACTTTCTTGGTCTGTCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 72 bp | CTCCATGCTGCCAGCTGTCTCCATCCACAGCCTGTGTaGATTCCACCTGTGCTGCACTCCAAGATGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: LHAASCLHPQPV*IPPVLHSKMAP Trigger: TGGTGCCATCTTGGAGTGCAGCACAGGTGGAATGCACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR TCA 72 bp | AATGGAGACCAGCAACAGCCTGCTCCCTGCAGCATCTaGCTAGCAACCACCAGAGTGAGCCTCCTGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: NGDQQQPAPCSI*LATTRVSLLLT Trigger: AGTCAGCAGGAGGCTCACTCTGGTGGTTGCTAGTCAGATGCTGCAGGGAGCAGGCTGTTGCTGGTCTCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CAA 90 bp | GTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGGACAAGCCTGTCCCTaGCAGCCCACAGAGGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VNMLTGCILHRLGLGTWMGQACP*QPTEEV Trigger: TACCTCCTCTGTGGGCTGCAAGGGACAGGCTTGTCC...CATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR TCA 72 bp | GGGGACTCAGGGAAAGGAATGGGTTTGGGAACAGCATaGGACTGGAGCCACAGTGGGCCAAGCCTGCATTTA | + |
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Preference number: 3 (lower is better) Translates to: GDSGKGMGLGTA*DWSHSGPSLHL Trigger: TAAATGCAGGCTTGGCCCACTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CAA 90 bp | GTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGTTGACAGATGCCTGCTaGGGCCTTAATCACAGCACT | + |
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Preference number: 3 (lower is better) Translates to: VNMLTGCILHRLGLGTWMLTDAC*GLNHST Trigger: AGTGCTGTGATTAAGGCCCAAGCAGGCATCTGTCAA...CATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 72 bp | ACAGTTGGTTGGTTGACTTATAGGACAGATTCATACTaGCAGCCCTTCAACGGCCATGGTGCTATGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TVGWLTYRTDSY*QPFNGHGAMAL Trigger: CAGAGCCATAGCACCATGGCCGTTGAAGGGCTGGCAGTATGAATCTGTCCTATAAGTCAACCAACCAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 72 bp | CAGTTTCACCAGGAATTACTGTCCAGTACAGTATGTTaGGGGTGGTGGTACATGGTCAACATGCTGACAGGC | + |
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Preference number: 3 (lower is better) Translates to: QFHQELLSSTVC*GWWYMVNMLTG Trigger: GCCTGTCAGCATGTTGACCATGTACCACCACCCCCAACATACTGTACTGGACAGTAATTCCTGGTGAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR TCA 72 bp | TTAATCACAGCACTTGCTGTGGGCAAACATCTGCTATaGATTGTGCTAGGGATGATGTGGCTGCTGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LITALAVGKHLL*IVLGMMWLLCR Trigger: CCTGCACAGCAGCCACATCATCCCTAGCACAATTCATAGCAGATGTTTGCCCACAGCAAGTGCTGTGATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 72 bp | TTTGGGGTTTATAACTTAGGAATTACAGCTCCATGCTaGCAGCTGTCTCCATCCACAGCCTGTGTGCATTCC | + |
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Preference number: 3 (lower is better) Translates to: FGVYNLGITAPC*QLSPSTACVHS Trigger: GGAATGCACACAGGCTGTGGATGGAGACAGCTGGCAGCATGGAGCTGTAATTCCTAAGTTATAAACCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 72 bp | AAGAGCACTTTGTCCTACATTCCTAGGTCTGGAGTCTaGGGGAGGCCTGGACAGCTACTTCCAAATTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: KSTLSYIPRSGV*GRPGQLLPNCK Trigger: TTTACAATTTGGAAGTAGCTGTCCAGGCCTCCCCCAGACTCCAGACCTAGGAATGTAGGACAAAGTGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR GCA 72 bp | GGTTATCTGAATCTAAAGTCCAGAAGCCATTCAGGTTaGTGTGGGGTACTGCCGCTGGCAATTTTGAGATTG | + |
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Preference number: 3 (lower is better) Translates to: GYLNLKSRSHSG*CGVLPLAILRL Trigger: CAATCTCAAAATTGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATTCAGATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 72 bp | ATTGTGCTAGGGATGATGTGGCTGCTGTGCAGGCCCTaGGCAAATGTGGACATGTATAAACATACTCTACTT | + |
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Preference number: 3 (lower is better) Translates to: IVLGMMWLLCRP*ANVDMYKHTLL Trigger: AAGTAGAGTATGTTTATACATGTCCACATTTGCCCAGGGCCTGCACAGCAGCCACATCATCCCTAGCACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR-3UTR CAA 90 bp | AATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCAATTATGATAAAGAGCACTTaGTCCTACATTCCTAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: NLKSRSHSGCCGVLPLAIMIKST*SYIPRS Trigger: AGACCTAGGAATGTAGGACAAAGTGCTCTTTATCAT...AATTGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 72 bp | CAGGGACCTCAGAATGATACTAAAGCTACAGTTGGTTaGTTGACTTATAGGACAGATTCATACTGCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: QGPQNDTKATVG*LTYRTDSYCQP Trigger: GGGCTGGCAGTATGAATCTGTCCTATAAGTCAACCAACCAACTGTAGCTTTAGTATCATTCTGAGGTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR TCA 72 bp | GACCTCAGAATGATACTAAAGCTACAGTTGGTTGGTTaGCTTATAGGACAGATTCATACTGCCAGCCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DLRMILKLQLVG*LIGQIHTASPS Trigger: TGAAGGGCTGGCAGTATGAATCTGTCCTATAAGTCAACCAACCAACTGTAGCTTTAGTATCATTCTGAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CCA 72 bp | AAAAAGAAAGACAGACCAAGAAAGTGCATGTTCAGTTaGTTATCTGAATCTAAAGTCCAGAAGCCATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: KKKDRPRKCMFS*LSESKVQKPFR Trigger: CCTGAATGGCTTCTGGACTTTAGATTCAGATAACCAACTGAACATGCACTTTCTTGGTCTGTCTTTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | GTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCCTCAGCCTTGTTCCTCCTGGCCCTCCTaGTCCGGCACAGGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VGSRHVLGSGGCASPQPCSSWPS*SGTGRV Trigger: CACCCTACCTGTGCCGGATCAGGAGGGCCAGGAGGA...ACAAGGCTGAGGGGAAGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | GTTGGTAGTAGGCATGTTCTGGGCAGTGGAGGCTGTGCTTCCCCTCAGCCTTGTGAATCCGTAAGCTTCTaGCCGGGCCCCGCGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VGSRHVLGSGGCASPQPCESVSF*PGPALL Trigger: CAAGAGCGCGGGGCCCGGCCAGAAGCTTACGGATTC...ACAAGGCTGAGGGGAAGCACAGCCTCCACTGCCCAGAACATGCCTACTACCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCATCCACAGCCTGTGTGCATTCCACCTGTGCTGCACTCCAAGATGGCGAGCTCCTGGATTGTTaGTGGAGGTGGCTTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSPSTACVHSTCAALQDGELLDC*WRWLRP Trigger: AGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTC...GCCATCTTGGAGTGCAGCACAGGTGGAATGCACACAGGCTGTGGATGGAGACAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | GTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACTTGTCCTGGGCACAGTCTGTGCCTCATCAGTaGGGCCCTGACGGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSTIILHWCMSFHLSWAQSVPHQ*GPDGAA Trigger: GGCAGCCCCGTCAGGGCCCCACTGATGAGGCACAGA...CTGTGCCCAGGACAAGTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | ATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGGGTCCCAGGAGCTCCTaGATTGTTGCTGGAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: MVNMLTGCILHRLGLGTWGPRSS*IVAGGG Trigger: GCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACC...CCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | TGGGGACTCAGGGAAAGGAATGGGTTTGGGAACAGCATGAGACTGGAGCCACAGGATTGTTGCTGGAGGTaGCTTCGGCCTGAAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: WGLRERNGFGNSMRLEPQDCCWR*LRPEVP Trigger: AGGAACTTCAGGCCGAAGCCACCTCCAGCAACAATC...CTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACCCACCGCCTCTGTCCTaGGCCTTTGCTCCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSVSTIILHWCMSFHPPPLS*AFAPAS Trigger: TGAAGCGGGAGCAAAGGCTCAGGACAGAGGCGGTGG...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACGGCTTTGGTCCTGAGTaGGCTCAGTCGCTCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSVSTIILHWCMSFHGFGPE*AQSLHR Trigger: GCGGTGGAGCGACTGAGCTCACTCAGGACCAAAGCC...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | GTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACTTGTCCTGGGCACAGGCATCCAACAGCTGCTaGTTGTGCCGCGCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTIILHWCMSFHLSWAQASNSC*LCRARF Trigger: GAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGC...CTGTGCCCAGGACAAGTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | AGATTCATACTGCCAGCCCTTCAACGGCCATGGTGCTATGGCTCTGATGAAACATTGCGAAGCTCCCGCTaGTCCTCTTTCTCCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RFILPALQRPWCYGSDETLRSSR*SSFSRM Trigger: CATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAA...TGTTTCATCAGAGCCATAGCACCATGGCCGTTGAAGGGCTGGCAGTATGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | TGGGGACTCAGGGAAAGGAATGGGTTTGGGAACAGCATGAGACTGGAGCCACAGTGCTGGCTCAGCTCCTaGTGCCCTTATATCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLRERNGFGNSMRLEPQCWLSS*CPYIFQ Trigger: TTGGAAGATATAAGGGCAGCAGGAGCTGAGCCAGCA...CTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | AGCACTGGGTTTGCAGCAATAGGTCCCAGTGTAGACAGTTTCACCAGGAATTACATGGCCTGCTTGATGTaGGCATCCCGCTGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGFAAIGPSVDSFTRNYMACLM*ASRWSL Trigger: GAGGGACCAGCGGGATGCCCACATCAAGCAGGCCAT...GTAATTCCTGGTGAAACTGTCTACACTGGGACCTATTGCTGCAAACCCAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 72 bp | GTGAGCCTCCTGCTGACTCTCATGATAAAGAGCACTTaGTCCTACATTCCTAGGTCTGGAGTCTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLLTLMIKST*SYIPRSGVWGR Trigger: CCTCCCCCAGACTCCAGACCTAGGAATGTAGGACAAAGTGCTCTTTATCATGAGAGTCAGCAGGAGGCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 72 bp | TGGTGGTACATGGTCAACATGCTGACAGGCTGTATTTaGCACAGGTTGGGTCTGGGGACATGGATGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WWYMVNMLTGCI*HRLGLGTWMAS Trigger: GGAAGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATGTACCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | AGATTCATACTGCCAGCCCTTCAACGGCCATGGTGCTATGGCTCTGATGAAACAGAGGGCCAGCTGTGGTaGCTTTCCTTTGGTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFILPALQRPWCYGSDETEGQLW*LSFGGL Trigger: AAGACCACCAAAGGAAAGTCACCACAGCTGGCCCTC...TGTTTCATCAGAGCCATAGCACCATGGCCGTTGAAGGGCTGGCAGTATGAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | CTTGCAGCCCACAGAGGAGGTAGGACCTTGTCTCCAACTCTACTGCTACTACTGCAGTTGATGCGCTCCTaGAACACCTTGTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAHRGGRTLSPTLLLLLQLMRS*NTLFCS Trigger: ACTGCAGAACAAGGTGTTCCAGGAGCGCATCAACTG...CAGTAGTAGCAGTAGAGTTGGAGACAAGGTCCTACCTCCTCTGTGGGCTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACCAGCCACGGGGTCTGTaGAAAAGTGCGACAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSVSTIILHWCMSFHQPRGL*KSATGW Trigger: CCATCCTGTCGCACTTTTCCACAGACCCCGTGGCTG...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | CATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGCTTCAAAGAACTCGTaGCTTCCCTCGAGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGQHADRLYFAQVGSGDMASKNS*LPSRQL Trigger: CAACTGTCTCGAGGGAAGCCACGAGTTCTTTGAAGC...CATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 72 bp | ACCTGCTCCCACACTTTGCAAGTGACAGGTGTCAAGTaGAAAGACCTGGGGGAAATTGACCTAGGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCSHTLQVTGVK*KDLGEIDLGDR Trigger: CCTGTCACCTAGGTCAATTTCCCCCAGGTCTTTCAACTTGACACCTGTCACTTGCAAAGTGTGGGAGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | GCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCTCTGTCTTCTGTCTCGAGGTGGCTTCGGCCTaGAGTTCCTTCCTCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANVDMYKHTLLEPSVFCLEVASA*SSFLTW Trigger: CCAGGTGAGGAAGGAACTTCAGGCCGAAGCCACCTC...GAGACAGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACGGGCATAGGTATACTTaGGAAGCTCCCGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSVSTIILHWCMSFHGHRYT*EAPAAP Trigger: AGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCC...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR TCA 90 bp | CATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGTATATCTTCCAACACTaGAGCATCCCAGGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGQHADRLYFAQVGSGDMYIFQH*SIPGEG Trigger: ACCTTCTCCTGGGATGCTTCAGTGTTGGAAGATATA...CATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACGTGACTTTCCTTTGGTaGTCTTCTCCCCTGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSVSTIILHWCMSFHVTFLW*SSPLRN Trigger: ATTCCGCAGGGGAGAAGACCACCAAAGGAAAGTCAC...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | ACCTGCTCCCACACTTTGCAAGTGACAGGTGTCAAGTTGAAAGACCTGGGGGAATCCTCTGGGTGTAAATaGATGTTGTCCAGGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSHTLQVTGVKLKDLGESSGCK*MLSRYL Trigger: CAAATACCTGGACAACATCCATTTACACCCAGAGGA...TTCCCCCAGGTCTTTCAACTTGACACCTGTCACTTGCAAAGTGTGGGAGCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | GCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCTCTGTCTTCTGTCTCGAGAGATTTCCTCCTTaGGCTCAGGTACCGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANVDMYKHTLLEPSVFCLERFPP*AQVPSW Trigger: CCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTC...GAGACAGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CCA 90 bp | GGTAGAAAAGAAACACCCAGGGACCTCAGAATGATACTAAAGCTACAGTTGGTTCCAGGCACTGCCAAATaGGGAGAGATTTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKETPRDLRMILKLQLVPGTAK*GEISSL Trigger: CAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGG...AACCAACTGTAGCTTTAGTATCATTCTGAGGTCCCTGGGTGTTTCTTTTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | GCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCTCTGTCTTCTGTCTCTGGCTCAGCTCCTGCTaGCCTTATATCTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ANVDMYKHTLLEPSVFCLWLSSC*PYIFQH Trigger: GTGTTGGAAGATATAAGGGCAGCAGGAGCTGAGCCA...GAGACAGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 72 bp | GGACCTCAGAATGATACTAAAGCTACAGTTGGTTGGTaGACTTATAGGACAGATTCATACTGCCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPQNDTKATVGW*TYRTDSYCQPF Trigger: GAAGGGCTGGCAGTATGAATCTGTCCTATAAGTCAACCAACCAACTGTAGCTTTAGTATCATTCTGAGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| 3UTR CAA 72 bp | CCTGGGCAAATGTGGACATGTATAAACATACTCTACTaGAGCCCTCTGTCTTCTGTCTCAACTATCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: PGQMWTCINILY*SPLSSVSTIIL Trigger: TAATATGATAGTTGAGACAGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTTGCCCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR GCA 90 bp | AAGAAAGACAGACCAAGAAAGTGCATGTTCAGTTGGTTATCTGAATCTAAAGTCTGGAACACCTTGTTCTaGAGTTTGATTTTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KKDRPRKCMFSWLSESKVWNTLF*SLIFWY Trigger: ATACCAGAAAATCAAACTGCAGAACAAGGTGTTCCA...GACTTTAGATTCAGATAACCAACTGAACATGCACTTTCTTGGTCTGTCTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 90 bp | AGCTGCCGATCCAGAGTGGCCCGCACAGGCTCGGCATCCAACAGCTaGTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRSRVARTGSASNS*CLCRARFCGCARAS Trigger: GGATGCACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | AGGCCAGAGCCGAGGGGCGGAAGACTCGGAGCTGCCGATCCAGAGTaGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPEPRGGRLGAADPE*PAQARHPTAAACAA Trigger: CGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCTCCGAGTCTTCCGCCCCTCGGCTCTGGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 90 bp | CAACAGCTGCTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTaGATCCTCACCCAGAACGTAGAACTCCTCCTGGCCCTCCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QQLLLVPRQVLRLRP*ILTQNVELLLALLI Trigger: GATCAGGAGGGCCAGGAGGAGTTCTACGTTCTGGGTGAGGATGCACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | GCCACGGGGTCTGTGGAAAAGTGCGACAGGATGGCCTGCTTGATGTaGGCATCCCGCTGGTCCCTCCTCAGGGTGACACCTGTGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATGSVEKCDRMACLM*ASRWSLLRVTPVSG Trigger: TCCGCTCACAGGTGTCACCCTGAGGAGGGACCAGCGGGATGCCCACATCAAGCAGGCCATCCTGTCGCACTTTTCCACAGACCCCGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS TCA 90 bp | AAGCTCCCGCTGCTCCTCTTTCTCCCGCATGGCTTTGGTCCTGAGTaGGCTCAGTCGCTCCACCGCCTCTGTCCTGAGCCTTTGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KLPLLLFLPHGFGPE*AQSLHRLCPEPLLP Trigger: CGGGAGCAAAGGCTCAGGACAGAGGCGGTGGAGCGACTGAGCTCACTCAGGACCAAAGCCATGCGGGAGAAAGAGGAGCAGCGGGAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 90 bp | ATGGAGGCAGCCACGGGGTCTGTGGAAAAGTGCGACAGGATGGCCTaGTTGATGTGGGCATCCCGCTGGTCCCTCCTCAGGGTGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: MEAATGSVEKCDRMA*LMWASRWSLLRVTP Trigger: AGGTGTCACCCTGAGGAGGGACCAGCGGGATGCCCACATCAAGCAGGCCATCCTGTCGCACTTTTCCACAGACCCCGTGGCTGCCTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS GCA 90 bp | GACAGCCATCTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTaGGAAGCTCCCGCTGCTCCTCTTTCTCCCGCATGGCTTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSHLAGARAQGHRYT*EAPAAPLSPAWLWS Trigger: GGACCAAAGCCATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAGATGGCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | TGGGCTCAGGTACCGAGTTGGTCCCAGGAGCTCCTGGATTGTTGCTaGAGGTGGCTTCGGCCTGAAGTTCCTTCCTCACCTGGTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WAQVPSWSQELLDCC*RWLRPEVPSSPGSG Trigger: TCCGGAACCAGGTGAGGAAGGAACTTCAGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 90 bp | CTGCCAAATGGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTTaGTCCCAGGAGCTCCTGGATTGTTGCTGGAGGTGGCTTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPNGERFPPWAQVPS*SQELLDCCWRWLRP Trigger: AGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS GCA 90 bp | GTCCTGAGTGAGCTCAGTCGCTCCACCGCCTCTGTCCTGAGCCTTTaGTCCCGCTTCACCTCCTCAGCTGTAAGGCTGAAGAAATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSELSRSTASVLSL*SRFTSSAVRLKKSE Trigger: CTCAGATTTCTTCAGCCTTACAGCTGAGGAGGTGAAGCGGGAGCAAAGGCTCAGGACAGAGGCGGTGGAGCGACTGAGCTCACTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | GATTTCCTCCTTGGGCTCAGGTACCGAGTTGGTCCCAGGAGCTCCTaGATTGTTGCTGGAGGTGGCTTCGGCCTGAAGTTCCTTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DFLLGLRYRVGPRSS*IVAGGGFGLKFLPH Trigger: GTGAGGAAGGAACTTCAGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS-3UTR CAA 90 bp | CTGAATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCATCCAACAGCTGCTGCTaGTGCCGCGCCAGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKSRSHSGCCGVLPLASNSCC*CRARFC Trigger: GCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGA...TGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | GACTTTCCTTTGGTGGTCTTCTCCCCTGCGGAATCCGTAAGCTTCTaGCCGGGCCCCGCGCTCTTGAACTTGATGTCAGCCTTGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFPLVVFSPAESVSF*PGPALLNLMSALIS Trigger: GGAAATCAAGGCTGACATCAAGTTCAAGAGCGCGGGGCCCGGCCAGAAGCTTACGGATTCCGCAGGGGAGAAGACCACCAAAGGAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | AACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGCTGGAGCTCCTGGATTGTaGCTGGAGGTGGCTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NMLTGCILHRLGLGTWMAGAPGL*LEVASA Trigger: GGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCC...AGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 90 bp | CAGGGTGACACCTGTGAGCGGACAGATGAAGAACACACCAGGCACTaGCAAATGGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QGDTCERTDEEHTRH*QMGRDFLLGLRYRV Trigger: AACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGTGTTCTTCATCTGTCCGCTCACAGGTGTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 90 bp | ACACCTGTGAGCGGACAGATGAAGAACACACCAGGCACTGCCAAATaGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPVSGQMKNTPGTAK*GEISSLGSGTELVP Trigger: TGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGTGTTCTTCATCTGTCCGCTCACAGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS-3UTR CAA 90 bp | TGGGGACTCAGGGAAAGGAATGGGTTTGGGAACAGCATGAGACTGGAGCCACAGGCCTCAAGACAGATTTaGCTGGCTCAGCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGLRERNGFGNSMRLEPQASRQI*LAQLLL Trigger: CAGCAGGAGCTGAGCCAGCAAAATCTGTCTTGAGGC...CTGTGGCTCCAGTCTCATGCTGTTCCCAAACCCATTCCTTTCCCTGAGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | GTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACTTGTCCTGGGCACAGGGCTCAGGTACCGAGTaGGTCCCAGGAGCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSTIILHWCMSFHLSWAQGSGTE*VPGAPG Trigger: TCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCC...CTGTGCCCAGGACAAGTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | AATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCAATTCTCTGTCCTGAGCCTTaGCTCCCGCTTCACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLKSRSHSGCCGVLPLAILCPEP*LPLHLL Trigger: GAGGAGGTGAAGCGGGAGCAAAGGCTCAGGACAGAG...AATTGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | CTGAATCTAAAGTCCAGAAGCCATTCAGGTTGCTGTGGGGTACTGCCGCTGGCACCCGCGCTCTTGAACTaGATGTCAGCCTTGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNLKSRSHSGCCGVLPLAPALLN*MSALIS Trigger: GGAAATCAAGGCTGACATCAAGTTCAAGAGCGCGGG...TGCCAGCGGCAGTACCCCACAGCAACCTGAATGGCTTCTGGACTTTAGATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | AACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGCTTGTGGTGACTTTCCTTaGGTGGTCTTCTCCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NMLTGCILHRLGLGTWMACGDFP*VVFSPA Trigger: CGCAGGGGAGAAGACCACCAAAGGAAAGTCACCACA...AGCCATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | CATGGTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGGAGAGATTTCCTCCTaGGGCTCAGGTACCGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: HGQHADRLYFAQVGSGDMGEISS*GSGTEL Trigger: CAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCC...CATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | GCTGTGCTTCCCCTCAGCCTTGTAGAGCTGCTGAGGGAGATGGGAATGGAGACCAACTTGATGTCAGCCTaGATTTCCTGGAAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: AVLPLSLVELLREMGMETNLMSA*ISWKNF Trigger: GAAGTTCTTCCAGGAAATCAAGGCTGACATCAAGTT...GGTCTCCATTCCCATCTCCCTCAGCAGCTCTACAAGGCTGAGGGGAAGCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | GCAAATGTGGACATGTATAAACATACTCTACTTGAGCCCTCTGTCTTCTGTCTCCCGGGCCCCGCGCTCTaGAACTTGATGTCAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ANVDMYKHTLLEPSVFCLPGPAL*NLMSAL Trigger: CAAGGCTGACATCAAGTTCAAGAGCGCGGGGCCCGG...GAGACAGAAGACAGAGGGCTCAAGTAGAGTATGTTTATACATGTCCACATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | GTCAACATGCTGACAGGCTGTATTTTGCACAGGTTGGGTCTGGGGACATGGATGGGGTGTAAATGGATGTaGTCCAGGTATTTGGCGATA | + |
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Preference number: 5 (lower is better) Translates to: VNMLTGCILHRLGLGTWMGCKWM*SRYLAI Trigger: TATCGCCAAATACCTGGACAACATCCATTTACACCC...CATCCATGTCCCCAGACCCAACCTGTGCAAAATACAGCCTGTCAGCATGTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | AGCACTGGGTTTGCAGCAATAGGTCCCAGTGTAGACAGTTTCACCAGGAATTACCGCTCCTGGAACACCTaGTTCTGCAGTTTGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: STGFAAIGPSVDSFTRNYRSWNT*FCSLIF Trigger: GAAAATCAAACTGCAGAACAAGGTGTTCCAGGAGCG...GTAATTCCTGGTGAAACTGTCTACACTGGGACCTATTGCTGCAAACCCAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS-3UTR CAA 90 bp | AGCCCTCTGTCTTCTGTCTCAACTATCATATTACACTGGTGCATGTCCTTCCACGGTAGGGTGACCTTCTaGAAGCCAATGGCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPLSSVSTIILHWCMSFHGRVTF*KPMASK Trigger: CTTTGAAGCCATTGGCTTCAAGAAGGTCACCCTACC...GTGGAAGGACATGCACCAGTGTAATATGATAGTTGAGACAGAAGACAGAGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 90 bp | GCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGTTGATGCGCTCCTaGAACACCTTGTTCTGCAGTTTGATTTTCTGGTATTTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ASKNSWLPSRQLMRS*NTLFCSLIFWYFSS Trigger: GGAAGAAAAATACCAGAAAATCAAACTGCAGAACAAGGTGTTCCAGGAGCGCATCAACTGTCTCGAGGGAAGCCACGAGTTCTTTGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 72 bp | CCAGGGCAGCAGCGGCAGCCATCTGTGCCTCATCAGTaGGGCCCTGACGGGGCTGCCGGAGGGCCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PGQQRQPSVPHQ*GPDGAAGGPAV Trigger: CACAGCTGGCCCTCCGGCAGCCCCGTCAGGGCCCCACTGATGAGGCACAGATGGCTGCCGCTGCTGCCCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 72 bp | GCCCGCACAGGCTCGGCATCCAACAGCTGCTGCTTGTaGCGCGCCAGGTTCTGCGGCTGCGCCCGTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: ARTGSASNSCCL*RARFCGCARAS Trigger: GGATGCACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 72 bp | CCGAGGGGCGGAAGACTCGGAGCTGCCGATCCAGAGTaGCCCGCACAGGCTCGGCATCCAACAGCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PRGGRLGAADPE*PAQARHPTAAA Trigger: AGCAGCAGCTGTTGGATGCCGAGCCTGTGCGGGCCACTCTGGATCGGCAGCTCCGAGTCTTCCGCCCCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 72 bp | CTGCTTGTGCCGCGCCAGGTTCTGCGGCTGCGCCCGTaGATCCTCACCCAGAACGTAGAACTCCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LLVPRQVLRLRP*ILTQNVELLLA Trigger: GGCCAGGAGGAGTTCTACGTTCTGGGTGAGGATGCACGGGCGCAGCCGCAGAACCTGGCGCGGCACAAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 72 bp | GCCACGGGGTCTGTGGAAAAGTGCGACAGGATGGCCTaGTTGATGTGGGCATCCCGCTGGTCCCTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATGSVEKCDRMA*LMWASRWSLLR Trigger: CCTGAGGAGGGACCAGCGGGATGCCCACATCAAGCAGGCCATCCTGTCGCACTTTTCCACAGACCCCGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 90 bp | GAGGCAGCCACGGGGTCTGTGGAAAAGTGCGACAGGATGGCCTGCTaGATGTGGGCATCCCGCTGGTCCCTCCTCAGGGTGACACCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EAATGSVEKCDRMAC*MWASRWSLLRVTPV Trigger: CACAGGTGTCACCCTGAGGAGGGACCAGCGGGATGCCCACATCAAGCAGGCCATCCTGTCGCACTTTTCCACAGACCCCGTGGCTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS GCA 72 bp | CTGGCAGGCGCACGCGCACAAGGGCATAGGTATACTTaGGAAGCTCCCGCTGCTCCTCTTTCTCCCGCATGG | + |
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Preference number: 6 (lower is better) Translates to: LAGARAQGHRYT*EAPAAPLSPAW Trigger: CCATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATACCTATGCCCTTGTGCGCGTGCGCCTGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS TCA 72 bp | CTGCTCCTCTTTCTCCCGCATGGCTTTGGTCCTGAGTaGGCTCAGTCGCTCCACCGCCTCTGTCCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLFLPHGFGPE*AQSLHRLCPEP Trigger: AGGCTCAGGACAGAGGCGGTGGAGCGACTGAGCTCACTCAGGACCAAAGCCATGCGGGAGAAAGAGGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 72 bp | GAGCTCAGTCGCTCCACCGCCTCTGTCCTGAGCCTTTaGTCCCGCTTCACCTCCTCAGCTGTAAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ELSRSTASVLSL*SRFTSSAVRLK Trigger: CTTCAGCCTTACAGCTGAGGAGGTGAAGCGGGAGCAAAGGCTCAGGACAGAGGCGGTGGAGCGACTGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 72 bp | TTGGTGGTCTTCTCCCCTGCGGAATCCGTAAGCTTCTaGCCGGGCCCCGCGCTCTTGAACTTGATGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LVVFSPAESVSF*PGPALLNLMSA Trigger: GGCTGACATCAAGTTCAAGAGCGCGGGGCCCGGCCAGAAGCTTACGGATTCCGCAGGGGAGAAGACCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CAA 90 bp | GTATACTTGCGAAGCTCCCGCTGCTCCTCTTTCTCCCGCATGGCTTaGGTCCTGAGTGAGCTCAGTCGCTCCACCGCCTCTGTCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VYLRSSRCSSFSRMA*VLSELSRSTASVLS Trigger: GCTCAGGACAGAGGCGGTGGAGCGACTGAGCTCACTCAGGACCAAAGCCATGCGGGAGAAAGAGGAGCAGCGGGAGCTTCGCAAGTATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 72 bp | GGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTTaGTCCCAGGAGCTCCTGGATTGTTGCTGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GERFPPWAQVPS*SQELLDCCWRW Trigger: CCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 72 bp | CACCAGGCACTGCCAAATGGGGAGAGATTTCCTCCTTaGGCTCAGGTACCGAGTTGGTCCCAGGAGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HQALPNGERFPP*AQVPSWSQELL Trigger: CAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 72 bp | TCTGTGGAAAAGTGCGACAGGATGGCCTGCTTGATGTaGGCATCCCGCTGGTCCCTCCTCAGGGTGACACCT | + |
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Preference number: 6 (lower is better) Translates to: SVEKCDRMACLM*ASRWSLLRVTP Trigger: AGGTGTCACCCTGAGGAGGGACCAGCGGGATGCCCACATCAAGCAGGCCATCCTGTCGCACTTTTCCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 90 bp | ACTGCCAAATGGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTaGGTCCCAGGAGCTCCTGGATTGTTGCTGGAGGTGGCTTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TAKWGEISSLGSGTE*VPGAPGLLLEVASA Trigger: GGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS GCA 72 bp | CAGGTACCGAGTTGGTCCCAGGAGCTCCTGGATTGTTaGTGGAGGTGGCTTCGGCCTGAAGTTCCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QVPSWSQELLDC*WRWLRPEVPSS Trigger: TGAGGAAGGAACTTCAGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 72 bp | GTACCGAGTTGGTCCCAGGAGCTCCTGGATTGTTGCTaGAGGTGGCTTCGGCCTGAAGTTCCTTCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: VPSWSQELLDCC*RWLRPEVPSSP Trigger: AGGTGAGGAAGGAACTTCAGGCCGAAGCCACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 72 bp | TGGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAGTaGGTCCCAGGAGCTCCTGGATTGTTGCTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: WGEISSLGSGTE*VPGAPGLLLEV Trigger: CACCTCCAGCAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 72 bp | ACACCAGGCACTGCCAAATGGGGAGAGATTTCCTCCTaGGGCTCAGGTACCGAGTTGGTCCCAGGAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TPGTAKWGEISS*GSGTELVPGAP Trigger: AGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 72 bp | GCGGAATCCGTAAGCTTCTGGCCGGGCCCCGCGCTCTaGAACTTGATGTCAGCCTTGATTTCCTGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: AESVSFWPGPAL*NLMSALISWKN Trigger: GTTCTTCCAGGAAATCAAGGCTGACATCAAGTTCAAGAGCGCGGGGCCCGGCCAGAAGCTTACGGATTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS GCA 72 bp | ACCTGTGAGCGGACAGATGAAGAACACACCAGGCACTaGCAAATGGGGAGAGATTTCCTCCTTGGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TCERTDEEHTRH*QMGRDFLLGLR Trigger: CCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGTGTTCTTCATCTGTCCGCTCACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CCA 72 bp | AGCGGACAGATGAAGAACACACCAGGCACTGCCAAATaGGGAGAGATTTCCTCCTTGGGCTCAGGTACCGAG | + |
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Preference number: 6 (lower is better) Translates to: SGQMKNTPGTAK*GEISSLGSGTE Trigger: CTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGTGTTCTTCATCTGTCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 90 bp | ATGAAGAACACACCAGGCACTGCCAAATGGGGAGAGATTTCCTCCTaGGGCTCAGGTACCGAGTTGGTCCCAGGAGCTCCTGGATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: MKNTPGTAKWGEISS*GSGTELVPGAPGLL Trigger: CAACAATCCAGGAGCTCCTGGGACCAACTCGGTACCTGAGCCCAAGGAGGAAATCTCTCCCCATTTGGCAGTGCCTGGTGTGTTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 72 bp | TCCGTAAGCTTCTGGCCGGGCCCCGCGCTCTTGAACTaGATGTCAGCCTTGATTTCCTGGAAGAACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVSFWPGPALLN*MSALISWKNFF Trigger: GAAGAAGTTCTTCCAGGAAATCAAGGCTGACATCAAGTTCAAGAGCGCGGGGCCCGGCCAGAAGCTTACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CAA 72 bp | CGATGGCTGCAAGCAGCTCAGGCCTCAAGACAGATTTaGCTGGCTCAGCTCCTGCTGCCCTTATATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RWLQAAQASRQI*LAQLLLPLYLP Trigger: TGGAAGATATAAGGGCAGCAGGAGCTGAGCCAGCAAAATCTGTCTTGAGGCCTGAGCTGCTTGCAGCCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CAA 72 bp | ATGGCTTCAAAGAACTCGTGGCTTCCCTCGAGACAGTaGATGCGCTCCTGGAACACCTTGTTCTGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: MASKNSWLPSRQ*MRSWNTLFCSL Trigger: CAAACTGCAGAACAAGGTGTTCCAGGAGCGCATCAACTGTCTCGAGGGAAGCCACGAGTTCTTTGAAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CCA 72 bp | AACTCGTGGCTTCCCTCGAGACAGTTGATGCGCTCCTaGAACACCTTGTTCTGCAGTTTGATTTTCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: NSWLPSRQLMRS*NTLFCSLIFWY Trigger: ATACCAGAAAATCAAACTGCAGAACAAGGTGTTCCAGGAGCGCATCAACTGTCTCGAGGGAAGCCACGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CAA 90 bp | CCCTCGAGACAGTTGATGCGCTCCTGGAACACCTTGTTCTGCAGTTaGATTTTCTGGTATTTTTCTTCCTCTGGGTGTAAATGGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSRQLMRSWNTLFCS*IFWYFSSSGCKWML Trigger: CAACATCCATTTACACCCAGAGGAAGAAAAATACCAGAAAATCAAACTGCAGAACAAGGTGTTCCAGGAGCGCATCAACTGTCTCGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019722.12 |
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| CDS CAA 72 bp | TTCTGGTATTTTTCTTCCTCTGGGTGTAAATGGATGTaGTCCAGGTATTTGGCGATAGTATCCACACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FWYFSSSGCKWM*SRYLAIVSTPS Trigger: GCTGGGTGTGGATACTATCGCCAAATACCTGGACAACATCCATTTACACCCAGAGGAAGAAAAATACCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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| CDS CAA 90 bp | AGTTTGATTTTCTGGTATTTTTCTTCCTCTGGGTGTAAATGGATGTaGTCCAGGTATTTGGCGATAGTATCCACACCCAGCTTCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: SLIFWYFSSSGCKWM*SRYLAIVSTPSFTR Trigger: CCGAGTGAAGCTGGGTGTGGATACTATCGCCAAATACCTGGACAACATCCATTTACACCCAGAGGAAGAAAAATACCAGAAAATCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019722.12 ENSMUST00000139371.2 |
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