Pregenerated sensors for UBXN2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020634Ensembl transcript IDs: ENSMUST00000020962.12, ENSMUST00000141360.2, ENSMUST00000142867.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCAAACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTaGATGTCTACTTGCAACCATCATTTTTCTCAGTCTCTCAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: PSNRKFSHIDFCLPL*MSTCNHHFSQSLKN Trigger: ATTTTTGAGAGACTGAGAAAAATGATGGTTGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTTTGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATAGGACAGGCTGTCCTTaGACTCAGAGATCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LCRLASQIHLPLPPECWDRTGCP*TQRSSC Trigger: GCAGGAGGATCTCTGAGTTCAAGGACAGCCTGTCCT...ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAACCTCTCAGCTTGGTGTaGGCTAGAGCTAGGGCATAC | + |
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Preference number: 2 (lower is better) Translates to: VDWPHKSTCLCLPSAGIKPLSLV*ARARAY Trigger: GTATGCCCTAGCTCTAGCTCACACCAAGCTGAGAGG...TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR TCA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCATCTGTGGCCCTGTCCTaGGAAGGGCTGGAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: TASLVTLTSVSHSACLLASVALS*EGLEHR Trigger: CCTGTGTTCCAGCCCTTCTCAGGACAGGGCCACAGA...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTTCTGTCTCCCACTCTaGATGTCTACTTGCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: LCRLASQIHLPLPPECWDFCLPL*MSTCNH Trigger: ATGGTTGCAAGTAGACATGCAGAGTGGGAGACAGAA...ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAAACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTTGTCCTGAGAAGGGCTaGAACACAGGCTTTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: PSNRKFSHIDFCLPLCMSCPEKG*NTGFVD Trigger: GTCTACAAAGCCTGTGTTCCAGCCCTTCTCAGGACA...AGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTTTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCATTCTGTCTCCCACTCTaGATGTCTACTTGCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: TASLVTLTSVSHSACLLAFCLPL*MSTCNH Trigger: ATGGTTGCAAGTAGACATGCAGAGTGGGAGACAGAA...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCCAAAGTGCTAGGATTAAACTAAAGGCCTGCTTTGCCACTACCACCACCTGCCAAATGAGTATTTaGGTATCTTTTGCCATCACA | + |
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Preference number: 2 (lower is better) Translates to: CLQSARIKLKACFATTTTCQMSI*VSFAIT Trigger: TGTGATGGCAAAAGATACTCAAATACTCATTTGGCA...GGTGGTGGTAGTGGCAAAGCAGGCCTTTAGTTTAATCCTAGCACTTTGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCGGGTGGGAAGGTTGTTACTATCAAGAGACAGGGTTTTGCTATGTCTCTGAAGAGTCTACATCTTaGATACTGTTGCCAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: VSGWEGCYYQETGFCYVSEESTS*ILLPNE Trigger: CTCATTTGGCAACAGTATCCAAGATGTAGACTCTTC...AGAGACATAGCAAAACCCTGTCTCTTGATAGTAACAACCTTCCCACCCGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCAAGCATTCTTCAAATCTaGTTCTTCCAATGTGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: TASLVTLTSVSHSACLLASILQI*FFQCER Trigger: ACGCTCACATTGGAAGAAGCAGATTTGAAGAATGCT...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCTCCGAGGATGAAGCACGGGCAATAACTACATTGATGCTTTTAATATGGTTCTGTCTCCCACTCTaGATGTCTACTTGCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: KSSEDEARAITTLMLLIWFCLPL*MSTCNH Trigger: ATGGTTGCAAGTAGACATGCAGAGTGGGAGACAGAA...CCATATTAAAAGCATCAATGTAGTTATTGCCCGTGCTTCATCCTCGGAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR TCA 72 bp | CCACCACCGCCTGGCGCAGCCAGTGTTCTTAACAGCTaGGCCATCTATGTCTCCGGGTGGGAAGGTTGTTAC | + |
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Preference number: 3 (lower is better) Translates to: PPPPGAASVLNS*AIYVSGWEGCY Trigger: GTAACAACCTTCCCACCCGGAGACATAGATGGCTCAGCTGTTAAGAACACTGGCTGCGCCAGGCGGTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR TCA 72 bp | ACCAAACTCCTGGGCTCCTCTCCTCTCAGCTTGGTGTaGGCTAGAGCTAGGGCATACACCTGTGGGCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: TKLLGSSPLSLV*ARARAYTCGQF Trigger: AAACTGCCCACAGGTGTATGCCCTAGCTCTAGCTCACACCAAGCTGAGAGGAGAGGAGCCCAGGAGTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGCAAGTTTAGTCACATaGACTTCTGTCTCCCACTCT | + |
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Preference number: 3 (lower is better) Translates to: VDWPHKSTCLCLPSAGIKASLVT*TSVSHS Trigger: AGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGC...TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR TCA 72 bp | CATATGGCTGTGCACTGCCATGTGTATGCTGGAAATTaGACCTGGATCTACAGCCAGGGCAGCCAGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HMAVHCHVYAGN*TWIYSQGSQCF Trigger: AAAACACTGGCTGCCCTGGCTGTAGATCCAGGTTCAATTTCCAGCATACACATGGCAGTGCACAGCCATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020962.12 |
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| 3UTR GCA 72 bp | GCAGAAGTTTCATATGGCTGTGCACTGCCATGTGTATaGTGGAAATTGAACCTGGATCTACAGCCAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: AEVSYGCALPCV*WKLNLDLQPGQ Trigger: CTGCCCTGGCTGTAGATCCAGGTTCAATTTCCAGCATACACATGGCAGTGCACAGCCATATGAAACTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020962.12 |
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| 3UTR CCA 72 bp | GAAGTTTCATATGGCTGTGCACTGCCATGTGTATGCTaGAAATTGAACCTGGATCTACAGCCAGGGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: EVSYGCALPCVC*KLNLDLQPGQP Trigger: TGGCTGCCCTGGCTGTAGATCCAGGTTCAATTTCCAGCATACACATGGCAGTGCACAGCCATATGAAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020962.12 |
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| 3UTR-3UTR CAA 90 bp | ACATTAAATCTTTGGACAGTTCTTTCCCCATTGGCTAACCAGATCTGGATCCTGCCCCCTCATAAGGGATaGAGAAGCCCTCAAACCGCA | + |
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Preference number: 3 (lower is better) Translates to: TLNLWTVLSPLANQIWILPPHKG*RSPQTA Trigger: TGCGGTTTGAGGGCTTCTCAATCCCTTATGAGGGGG...CAGGATCCAGATCTGGTTAGCCAATGGGGAAAGAACTGTCCAAAGATTTAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGCTCCGAGGATGAAGCACGGGCAATAACTACATTGATGCTTTTAATATGGCCCCCTCATAAGGGATaGAGAAGCCCTCAAACCGCA | + |
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Preference number: 3 (lower is better) Translates to: KSSEDEARAITTLMLLIWPPHKG*RSPQTA Trigger: TGCGGTTTGAGGGCTTCTCAATCCCTTATGAGGGGG...CCATATTAAAAGCATCAATGTAGTTATTGCCCGTGCTTCATCCTCGGAGCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAGGACAGGCTGTCCTTGAACTCAGAGATCCTCCTGCCTCTGCCTCCAAACGGGCAATAACTACATaGATGCTTTTAATATGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SVGQAVLELRDPPASASKRAITT*MLLIWH Trigger: ATGCCATATTAAAAGCATCAATGTAGTTATTGCCCG...TTTGGAGGCAGAGGCAGGAGGATCTCTGAGTTCAAGGACAGCCTGTCCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR-3UTR CAA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCGCAAGTTTAGTCACATaGACTTCTGTCTCCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCASLVT*TSVSHS Trigger: AGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGC...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| 3UTR-3UTR CAA 90 bp | TACTATCAAGAGACAGGGTTTTGCTATGTCTCTTATGCTGACCAAACTCCTGGGGCAAGTTTAGTCACATaGACTTCTGTCTCCCACTCT | + |
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Preference number: 3 (lower is better) Translates to: YYQETGFCYVSYADQTPGASLVT*TSVSHS Trigger: AGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGC...CCCAGGAGTTTGGTCAGCATAAGAGACATAGCAAAACCCTGTCTCTTGATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR GCA 72 bp | CGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTaGATGTCTACTTGCAACCATCATTTTTCTCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: RKFSHIDFCLPL*MSTCNHHFSQS Trigger: AGACTGAGAAAAATGATGGTTGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| 3UTR CCA 72 bp | AGAGGGAGTTGGATATCTTGTAGCAGAAGTTTCATATaGCTGTGCACTGCCATGTGTATGCTGGAAATTGAA | + |
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Preference number: 3 (lower is better) Translates to: RGSWISCSRSFI*LCTAMCMLEIE Trigger: TTCAATTTCCAGCATACACATGGCAGTGCACAGCCATATGAAACTTCTGCTACAAGATATCCAACTCCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020962.12 |
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| 3UTR-3UTR CAA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCACGGGCAATAACTACATaGATGCTTTTAATATGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TASLVTLTSVSHSACLLARAITT*MLLIWH Trigger: ATGCCATATTAAAAGCATCAATGTAGTTATTGCCCG...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR TCA 72 bp | TTGCCATCACAAGTAGAAACTGAAAAGCTCCGAGGATaGAGCACGGGCAATAACTACATTGATGCTTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LPSQVETEKLRG*STGNNYIDAFN Trigger: ATTAAAAGCATCAATGTAGTTATTGCCCGTGCTTCATCCTCGGAGCTTTTCAGTTTCTACTTGTGATGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | GACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGGCACCAGCCTTCCCTaGTTCCTCAAAAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: DWPHKSTCLCLPSAGIKGGTSLP*FLKKAV Trigger: GACAGCCTTTTTGAGGAAGCAGGGAAGGCTGGTGCC...GCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | TTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTGAAAGGAAGAGCTGTTaGCAGGGCAAAGGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FVDWPHKSTCLCLPSAGIERKSC*QGKGRA Trigger: AGCCCTCCCTTTGCCCTGGCAACAGCTCTTCCTTTC...AATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTGTCCTGAGAAGGGCTaGAACACAGGCTTTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: LCRLASQIHLPLPPECWDCPEKG*NTGFVD Trigger: GTCTACAAAGCCTGTGTTCCAGCCCTTCTCAGGACA...ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | GTCTCCGGGTGGGAAGGTTGTTACTATCAAGAGACAGGGTTTTGCTATGTCTCTTCTGTGGCCCTGTCCTaGGAAGGGCTGGAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: VSGWEGCYYQETGFCYVSSVALS*EGLEHR Trigger: CCTGTGTTCCAGCCCTTCTCAGGACAGGGCCACAGA...AGAGACATAGCAAAACCCTGTCTCTTGATAGTAACAACCTTCCCACCCGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | GACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTAATTCCCCCTTTTTaGTGGAGTTCAGAAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: DWPHKSTCLCLPSAGIKGVIPPF*WSSETA Trigger: AGCAGTTTCTGAACTCCATCAAAAAGGGGGAATTAC...GCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | GTCTCCGGGTGGGAAGGTTGTTACTATCAAGAGACAGGGTTTTGCTATGTCTCTGGCACCAGCCTTCCCTaGTTCCTCAAAAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VSGWEGCYYQETGFCYVSGTSLP*FLKKAV Trigger: GACAGCCTTTTTGAGGAAGCAGGGAAGGCTGGTGCC...AGAGACATAGCAAAACCCTGTCTCTTGATAGTAACAACCTTCCCACCCGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | TGTCTCCGGGTGGGAAGGTTGTTACTATCAAGAGACAGGGTTTTGCTATGTCTCTGGGGGACAAGCATTTaGCACCAGCCTTCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CLRVGRLLLSRDRVLLCLWGTSI*HQPSLL Trigger: AAGCAGGGAAGGCTGGTGCCAAATGCTTGTCCCCCA...GAGACATAGCAAAACCCTGTCTCTTGATAGTAACAACCTTCCCACCCGGAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCATGGGGGACAAGCATTTaGCACCAGCCTTCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TASLVTLTSVSHSACLLAWGTSI*HQPSLL Trigger: AAGCAGGGAAGGCTGGTGCCAAATGCTTGTCCCCCA...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | TGCCTCCAAAGTGCTAGGATTAAACTAAAGGCCTGCTTTGCCACTACCACCACCTGTCCTGAGAAGGGCTaGAACACAGGCTTTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: CLQSARIKLKACFATTTTCPEKG*NTGFVD Trigger: GTCTACAAAGCCTGTGTTCCAGCCCTTCTCAGGACA...GGTGGTGGTAGTGGCAAAGCAGGCCTTTAGTTTAATCCTAGCACTTTGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | TGCCTCCAAAGTGCTAGGATTAAACTAAAGGCCTGCTTTGCCACTACCACCACCTTATCATTGAGGGGTTaGCTGTCAGGAGGTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: CLQSARIKLKACFATTTTLSLRG*LSGGPV Trigger: AACAGGACCTCCTGACAGTCAACCCCTCAATGATAA...GGTGGTGGTAGTGGCAAAGCAGGCCTTTAGTTTAATCCTAGCACTTTGGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | CAAACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGGCACCAGCCTTCCCTaGTTCCTCAAAAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QTASLVTLTSVSHSACLLGTSLP*FLKKAV Trigger: GACAGCCTTTTTGAGGAAGCAGGGAAGGCTGGTGCC...AAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | TTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAGCATTCTTCAAATCTaGTTCTTCCAATGTGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: FVDWPHKSTCLCLPSAGISILQI*FFQCER Trigger: ACGCTCACATTGGAAGAAGCAGATTTGAAGAATGCT...AATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | ACATTAAATCTTTGGACAGTTCTTTCCCCATTGGCTAACCAGATCTGGATCCTGTGGGGGACAAGCATTTaGCACCAGCCTTCCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLNLWTVLSPLANQIWILWGTSI*HQPSLL Trigger: AAGCAGGGAAGGCTGGTGCCAAATGCTTGTCCCCCA...CAGGATCCAGATCTGGTTAGCCAATGGGGAAAGAACTGTCCAAAGATTTAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| CDS-3UTR CCA 90 bp | CTTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATGAAACATTAAATCTTTaGACAGTTCTTTCCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: LCRLASQIHLPLPPECWDETLNL*TVLSPL Trigger: CAATGGGGAAAGAACTGTCCAAAGATTTAATGTTTC...ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCTTATCATTGAGGGGTTaGCTGTCAGGAGGTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCLSLRG*LSGGPV Trigger: AACAGGACCTCCTGACAGTCAACCCCTCAATGATAA...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | TGCCTCCAAAGTGCTAGGATTAAACTAAAGGCCTGCTTTGCCACTACCACCACCGTAATTCCCCCTTTTTaGTGGAGTTCAGAAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLQSARIKLKACFATTTTVIPPF*WSSETA Trigger: AGCAGTTTCTGAACTCCATCAAAAAGGGGGAATTAC...GGTGGTGGTAGTGGCAAAGCAGGCCTTTAGTTTAATCCTAGCACTTTGGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR GCA 90 bp | AAAAGCTCCGAGGATGAAGCACGGGCAATAACTACATTGATGCTTTTAATATGGGAAAGGAAGAGCTGTTaGCAGGGCAAAGGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSSEDEARAITTLMLLIWERKSC*QGKGRA Trigger: AGCCCTCCCTTTGCCCTGGCAACAGCTCTTCCTTTC...CCATATTAAAAGCATCAATGTAGTTATTGCCCGTGCTTCATCCTCGGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CCA 90 bp | TTTGTAGACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTGAAACATTAAATCTTTaGACAGTTCTTTCCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: FVDWPHKSTCLCLPSAGIETLNL*TVLSPL Trigger: CAATGGGGAAAGAACTGTCCAAAGATTTAATGTTTC...AATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTCTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | TACTATCAAGAGACAGGGTTTTGCTATGTCTCTTATGCTGACCAAACTCCTGGGTTATCATTGAGGGGTTaGCTGTCAGGAGGTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: YYQETGFCYVSYADQTPGLSLRG*LSGGPV Trigger: AACAGGACCTCCTGACAGTCAACCCCTCAATGATAA...CCCAGGAGTTTGGTCAGCATAAGAGACATAGCAAAACCCTGTCTCTTGATAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| 3UTR CAA 72 bp | CATGATATTTTGTCTGCGTGTATGTCTACGTATAACTaGAGTGCAGTGACCACAGAGGCCAGAAGAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HDILSACMSTYN*SAVTTEARRGS Trigger: ACTCCCTCTTCTGGCCTCTGTGGTCACTGCACTCAAGTTATACGTAGACATACACGCAGACAAAATATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020962.12 |
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| CDS-3UTR GCA 90 bp | CCCTCAAACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTAGCATTCTTCAAATCTaGTTCTTCCAATGTGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: PSNRKFSHIDFCLPLCMSSILQI*FFQCER Trigger: ACGCTCACATTGGAAGAAGCAGATTTGAAGAATGCT...AGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTTTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCATGTGGCTCACCCTATaGGAAACATTAAATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCMWLTL*ETLNLW Trigger: CCAAAGATTTAATGTTTCTCATAGGGTGAGCCACAT...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR TCA 90 bp | TACTATCAAGAGACAGGGTTTTGCTATGTCTCTTATGCTGACCAAACTCCTGGGATGTGGCTCACCCTATaGGAAACATTAAATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: YYQETGFCYVSYADQTPGMWLTL*ETLNLW Trigger: CCAAAGATTTAATGTTTCTCATAGGGTGAGCCACAT...CCCAGGAGTTTGGTCAGCATAAGAGACATAGCAAAACCCTGTCTCTTGATAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | TCTGTAGGACAGGCTGTCCTTGAACTCAGAGATCCTCCTGCCTCTGCCTCCAAAGGAAAGGAAGAGCTGTaGCCAGGGCAAAGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SVGQAVLELRDPPASASKGKEEL*PGQREG Trigger: GCCCTCCCTTTGCCCTGGCAACAGCTCTTCCTTTCC...TTTGGAGGCAGAGGCAGGAGGATCTCTGAGTTCAAGGACAGCCTGTCCTACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCGGAAAGGAAGAGCTGTaGCCAGGGCAAAGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCGKEEL*PGQREG Trigger: GCCCTCCCTTTGCCCTGGCAACAGCTCTTCCTTTCC...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | GACTGGCCTCACAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATATTCACAGTCCTTTaGTTGATTATCATTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: DWPHKSTCLCLPSAGIKGIFTVL*LIIIEG Trigger: CCCCTCAATGATAATCAACAAAAGGACTGTGAATAT...GCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTGTGAGGCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCAGTAATGGGCTCCAAGTaGTTCAGTGAAACAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: TASLVTLTSVSHSACLLAVMGSK*FSETAD Trigger: GTCTGCTGTTTCACTGAACAACTTGGAGCCCATTAC...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCAACCGTAATGGGCTCCAAGTaGTTCAGTGAAACAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ASLVTLTSVSHSACLLATVMGSK*FSETAD Trigger: GTCTGCTGTTTCACTGAACAACTTGGAGCCCATTAC...GGTTGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCAGGCTCGGCAGTTTTTaGGAGTCTCTGAATGATTAC | + |
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Preference number: 5 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCRLGSF*ESLNDY Trigger: GTAATCATTCAGAGACTCCAAAAAACTGCCGAGCCT...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCGGGTGGGAAGGTTGTTACTATCAAGAGACAGGGTTTTGCTATGTCTCTTTCACAGTCCTTTTGTaGATTATCATTGAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VSGWEGCYYQETGFCYVSFTVLL*IIIEGL Trigger: CAACCCCTCAATGATAATCAACAAAAGGACTGTGAA...AGAGACATAGCAAAACCCTGTCTCTTGATAGTAACAACCTTCCCACCCGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | TCTTCCAATGTGAGCGTTTCATCCAGAAACCTGAGGAAAGGAAGAGCTGTTGCCTTCACAGTCCTTTTGTaGATTATCATTGAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSNVSVSSRNLRKGRAVAFTVLL*IIIEGL Trigger: CAACCCCTCAATGATAATCAACAAAAGGACTGTGAA...GGCAACAGCTCTTCCTTTCCTCAGGTTTCTGGATGAAACGCTCACATTGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141360.2 |
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| CDS-3UTR CAA 90 bp | CAAACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTAGGCTCGGCAGTTTTTaGGAGTCTCTGAATGATTAC | + |
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Preference number: 5 (lower is better) Translates to: QTASLVTLTSVSHSACLLRLGSF*ESLNDY Trigger: GTAATCATTCAGAGACTCCAAAAAACTGCCGAGCCT...AAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020962.12 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | AACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCTTCACAGTCCTTTTGTaGATTATCATTGAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NRKFSHIDFCLPLCMSTCFTVLL*IIIEGL Trigger: CAACCCCTCAATGATAATCAACAAAAGGACTGTGAA...GCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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| CDS-3UTR CAA 90 bp | ACCGCAAGTTTAGTCACATTGACTTCTGTCTCCCACTCTGCATGTCTACTTGCAATATTCACAGTCCTTTaGTTGATTATCATTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TASLVTLTSVSHSACLLAIFTVL*LIIIEG Trigger: CCCCTCAATGATAATCAACAAAAGGACTGTGAATAT...TGCAAGTAGACATGCAGAGTGGGAGACAGAAGTCAATGTGACTAAACTTGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020962.12 ENSMUST00000141360.2 ENSMUST00000142867.8 |
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