Pregenerated sensors for UBXN11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012126Ensembl transcript IDs: ENSMUST00000070246.9, ENSMUST00000074690.11, ENSMUST00000151113.2, ENSMUST00000156750.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTGCCTGCCTaGCTGAGGGTGGCTGCCCCCGGGCTGCCTCCCGTGTTGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SHPVSHVGSAVCLPA*LRVAAPGLPPVLEL Trigger: CAGCTCCAACACGGGAGGCAGCCCGGGGGCAGCCACCCTCAGGCAGGCAGGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 90 bp | TGTCCGGGTCCCTGCCTGGCAGAGGCAGATAGTTCTGGTGGTGTTTaGACTGTCCCAGGGCTGCCGCTGCGTGTGCGTGTGCATGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CPGPCLAEADSSGGV*TVPGLPLRVRVHVC Trigger: ACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCTCTGCCAGGCAGGGACCCGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 90 bp | CTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTGCGTGTaGATGTGTGTATGTGTGTGGAACACATGGCTGGCTGGCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: LVVFGLSQGCRCVCV*MCVCVWNTWLAGST Trigger: TGTGCTGCCAGCCAGCCATGTGTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 90 bp | GCCCTGACGATGGCTGTCCCCAGCCACACCTTGGGGCATCCTCTCTaGCTGGCCCTGTCTGATGAGCATTTCTGTTGCTTCCATCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: ALTMAVPSHTLGHPL*LALSDEHFCCFHQP Trigger: TGGCTGATGGAAGCAACAGAAATGCTCATCAGACAGGGCCAGGCAGAGAGGATGCCCCAAGGTGTGGCTGGGGACAGCCATCGTCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 90 bp | GGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTaGGGCTCCAGTTATAGGCCTGAGCATCTCTACCACCCCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GEQEPRGQRVSGYAG*GSSYRPEHLYHPLP Trigger: AGGGAGGGGGTGGTAGAGATGCTCAGGCCTATAACTGGAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 90 bp | ATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTaGGTGTGCATGTGTGTATGTGTGTGGAACACATGGCTGGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: IVLVVFGLSQGCRCV*VCMCVCVWNTWLAG Trigger: GCCAGCCAGCCATGTGTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 90 bp | AGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTaGGTGTGCGTGTGCATGTGTGTATGTGTGTGGAACACATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RQIVLVVFGLSQGCR*VCVCMCVCVWNTWL Trigger: CAGCCATGTGTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 90 bp | ATTGGGTCCATGGGGGTAGTTGTGGCACTGGTTTTGTGCACACTCTaGAGAAAGTATCCATGTGAGCTTGTGGATCTACATGCATCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: IGSMGVVVALVLCTL*RKYPCELVDLHASG Trigger: ACCAGATGCATGTAGATCCACAAGCTCACATGGATACTTTCTCCAGAGTGTGCACAAAACCAGTGCCACAACTACCCCCATGGACCCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTCATGACCATGATGGCTaGGTCACCCTGTTTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: AEADSSGGVWTVPGLPLRHDHDG*VTLFPM Trigger: CATGGGAAACAGGGTGACTCAGCCATCATGGTCATG...ACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR-3UTR GCA 90 bp | GCGTGTGCATGTGTGTATGTGTGTGGAACACATGGCTGGCTGGCAGCACATGACGTAGGTTCTGCTGTCTaGCTGCCTGCCTGCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ACACVYVCGTHGWLAAHDVGSAV*LPACLR Trigger: CCTCAGGCAGGCAGGCAGGCAGACAGCAGAACCTAC...GTCATGTGCTGCCAGCCAGCCATGTGTTCCACACACATACACACATGCACACGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR-3UTR GCA 90 bp | ATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTGCCTGCGTGGCACTGGTTTTGTaGACACTCTGGAGAAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: MMAESPCFPCRFCCLPACVALVL*TLWRKY Trigger: ATACTTTCTCCAGAGTGTGCACAAAACCAGTGCCAC...GCAGGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | CTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTaGCTGCCTGCCTGCCTGAGGGTGGCTGCCCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: LSHPVSHVGSAV*LPACLRVAAPG Trigger: CCCGGGGGCAGCCACCCTCAGGCAGGCAGGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | TCCTCTGGTGCTGACTGCTTGTGGTGTCCGGGTCCCTaGCTGGCAGAGGCAGATAGTTCTGGTGGTGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSGADCLWCPGP*LAEADSSGGVW Trigger: CCAAACACCACCAGAACTATCTGCCTCTGCCAGGCAGGGACCCGGACACCACAAGCAGTCAGCACCAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR TCA 72 bp | CATGCATCTGGTTGTCTTCAGAGGCCTCGCCCCCATTaGGGCTCCCCTGACCCAGCTGAGACAGAGAATGTC | + |
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Preference number: 3 (lower is better) Translates to: HASGCLQRPRPH*GSPDPAETENV Trigger: GACATTCTCTGTCTCAGCTGGGTCAGGGGAGCCTCAATGGGGGCGAGGCCTCTGAAGACAACCAGATGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | TTTGGACTGTCCCAGGGCTGCCGCTGCGTGTGCGTGTaGATGTGTGTATGTGTGTGGAACACATGGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: FGLSQGCRCVCV*MCVCVWNTWLA Trigger: AGCCAGCCATGTGTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | GTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTaGGTGTGCATGTGTGTATGTGTGTGGAACACATGG | + |
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Preference number: 3 (lower is better) Translates to: VVFGLSQGCRCV*VCMCVCVWNTW Trigger: CCATGTGTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | GTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTaGGTGTGCGTGTGCATGTGTGTATGTGTGTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: VLVVFGLSQGCR*VCVCMCVCVWN Trigger: GTTCCACACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 72 bp | CTGTCCCCAGCCACACCTTGGGGCATCCTCTCTGCCTaGCCCTGTCTGATGAGCATTTCTGTTGCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSPATPWGILSA*PCLMSISVASI Trigger: GATGGAAGCAACAGAAATGCTCATCAGACAGGGCCAGGCAGAGAGGATGCCCCAAGGTGTGGCTGGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCTGGCAGCACATGACCATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTCTACATGCATCTGGTaGTCTTCAGAGGCCTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: AGWQHMTMMAESPCFPCRSTCIW*SSEASP Trigger: GGGCGAGGCCTCTGAAGACAACCAGATGCATGTAGA...CCTACATGGGAAACAGGGTGACTCAGCCATCATGGTCATGTGCTGCCAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | CAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTaGCGCTGCGTGTGCGTGTGCATGTGTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QIVLVVFGLSQG*RCVCVCMCVCV Trigger: CACACATACACACATGCACACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR TCA 72 bp | GCCCTAGAGACAATTAAATGTCCATTCCTCTGGTGCTaGCTGCTTGTGGTGTCCGGGTCCCTGCCTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ALETIKCPFLWC*LLVVSGSLPGR Trigger: TCTGCCAGGCAGGGACCCGGACACCACAAGCAGTCAGCACCAGAGGAATGGACATTTAATTGTCTCTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 72 bp | AATGTCAGCCCAGCTAGGGCTGGCCACTCCCTCCACTaGATTCACTTAGTACAACTTGGAGAACAGGAACCC | + |
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Preference number: 3 (lower is better) Translates to: NVSPARAGHSLH*IHLVQLGEQEP Trigger: GGGTTCCTGTTCTCCAAGTTGTACTAAGTGAATCCAGTGGAGGGAGTGGCCAGCCCTAGCTGGGCTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 72 bp | CAATTAAATGTCCATTCCTCTGGTGCTGACTGCTTGTaGTGTCCGGGTCCCTGCCTGGCAGAGGCAGATAGT | + |
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Preference number: 3 (lower is better) Translates to: QLNVHSSGADCL*CPGPCLAEADS Trigger: ACTATCTGCCTCTGCCAGGCAGGGACCCGGACACCACAAGCAGTCAGCACCAGAGGAATGGACATTTAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR GCA 72 bp | ATTGGGTCCATGGGGGTAGTTGTGGCACTGGTTTTGTaGACACTCTGGAGAAAGTATCCATGTGAGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: IGSMGVVVALVL*TLWRKYPCELV Trigger: CACAAGCTCACATGGATACTTTCTCCAGAGTGTGCACAAAACCAGTGCCACAACTACCCCCATGGACCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CCA 72 bp | TGTGCACACTCTGGAGAAAGTATCCATGTGAGCTTGTaGATCTACATGCATCTGGTTGTCTTCAGAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CAHSGESIHVSL*IYMHLVVFRGL Trigger: GAGGCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCACATGGATACTTTCTCCAGAGTGTGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR TCA 72 bp | ACTGGTTTTGTGCACACTCTGGAGAAAGTATCCATGTaGGCTTGTGGATCTACATGCATCTGGTTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TGFVHTLEKVSM*ACGSTCIWLSS Trigger: TGAAGACAACCAGATGCATGTAGATCCACAAGCTCACATGGATACTTTCTCCAGAGTGTGCACAAAACCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR GCA 90 bp | TGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGGCTCGACTCCTGGCTCCTCTaGCGCTCAGAAGCCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: WRTGTQGTKSQWLCRLGLDSWLL*RSEAKA Trigger: TGCCTTGGCTTCTGAGCGGCAGAGGAGCCAGGAGTC...GAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | GCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTGCGTCGTCCTGGTAGACCGTaGGCGGGAAGGTGCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: ADSSGGVWTVPGLPLRVRRPGRP*AGRCSR Trigger: TCTTGAGCACCTTCCCGCCCACGGTCTACCAGGACG...ACGCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | TGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGGCTCAGTCATCCTGGAGCCTaGAGTCTCCTCCACCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: WRTGTQGTKSQWLCRLGLSHPGA*SLLHPV Trigger: GACAGGGTGGAGGAGACTTCAGGCTCCAGGATGACT...GAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | TGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGGCTCCAGGTGTCTCCACTATaGTCTCCTGGATCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WRTGTQGTKSQWLCRLGLQVSPL*SPGSGQ Trigger: CTGCCCGGATCCAGGAGATCATAGTGGAGACACCTG...GAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR GCA 90 bp | AGAGGCCTCGCCCCCATTGAGGCTCCCCTGACCCAGCTGAGACAGAGAATGTCACCGTGGGCGGGAAGGTaGTCAAGATCTCAAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGLAPIEAPLTQLRQRMSPWAGR*SRSQRQ Trigger: CTGCCTTTGAGATCTTGAGCACCTTCCCGCCCACGG...TGACATTCTCTGTCTCAGCTGGGTCAGGGGAGCCTCAATGGGGGCGAGGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | ACCATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTGCCGGAGGCAGCGCTGCGTaGAGGGATCGTAGAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TMMAESPCFPCRFCCLPAGGSAA*RDRRRA Trigger: GGCCCTTCTACGATCCCTCCACGCAGCGCTGCCTCC...GGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGGCAGCACATGACCATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTCTGCAAGGTGTCCCTaGTGGGGCCCCGGATGTCAA | + |
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Preference number: 4 (lower is better) Translates to: AGWQHMTMMAESPCFPCRSARCP*WGPGCQ Trigger: TTGACATCCGGGGCCCCATCAGGGACACCTTGCAGA...CCTACATGGGAAACAGGGTGACTCAGCCATCATGGTCATGTGCTGCCAGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AACTTGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGCCCTCACCTGGGAATTaGCCCAGACCATCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NLENRNPGDKESVAMPAGPSPGN*PRPSSG Trigger: CCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGG...CCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGGCTCCAGATGTCAGGTGACTCCTaGCTCCTCTGCCGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RTGTQGTKSQWLCRLGLQMSGDS*LLCRSE Trigger: TTCTGAGCGGCAGAGGAGCCAGGAGTCACCTGACAT...CTGGAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTGCTCCGCACGTCGCCAATaGTATCCTCAGGCCACATCA | + |
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Preference number: 4 (lower is better) Translates to: RQIVLVVFGLSQGCRCVCSARRQ*YPQATS Trigger: TGATGTGGCCTGAGGATACCATTGGCGACGTGCGGA...GCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AACTTGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGAGACCTTCAGCGGGATaGGCTCTAGGGTACGGAACC | + |
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Preference number: 4 (lower is better) Translates to: NLENRNPGDKESVAMPAGRPSAG*ALGYGT Trigger: GGTTCCGTACCCTAGAGCCCATCCCGCTGAAGGTCT...CCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | AACTTGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGCTCCGTTCTCGGACTTaGTGCGAAGCATGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NLENRNPGDKESVAMPAGLRSRT*CEAWRA Trigger: TGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAG...CCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR GCA 90 bp | AACTTGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGATTGGGCAGCAGTTCTaGAAGGTGTCCCTGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: NLENRNPGDKESVAMPAGIGQQF*KVSLMG Trigger: CCCCATCAGGGACACCTTGCAGAACTGCTGCCCAAT...CCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | GTGAGCTTGTGGATCTACATGCATCTGGTTGTCTTCAGAGGCCTCGCCCCCATTCCTCCACCCTGTCTGTaGCCTTGCGCATTTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSLWIYMHLVVFRGLAPIPPPCL*PCAFSA Trigger: GGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGG...AATGGGGGCGAGGCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | ATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTGCCTGCGATCTCAAAGGCAGCTaGATCCATGTCCCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MMAESPCFPCRFCCLPACDLKGS*IHVPGL Trigger: CAGGCCAGGGACATGGATTCAGCTGCCTTTGAGATC...GCAGGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | GTGAGCTTGTGGATCTACATGCATCTGGTTGTCTTCAGAGGCCTCGCCCCCATTCACACGACCCTCACCTaGGAATTGGCCCAGACCATC | + |
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Preference number: 4 (lower is better) Translates to: VSLWIYMHLVVFRGLAPIHTTLT*ELAQTI Trigger: GATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTG...AATGGGGGCGAGGCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | GTGAGCTTGTGGATCTACATGCATCTGGTTGTCTTCAGAGGCCTCGCCCCCATTGATCCGGGCAGGCATTaGGCAGCAGTTCTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VSLWIYMHLVVFRGLAPIDPGRH*AAVLQG Trigger: ACCTTGCAGAACTGCTGCCCAATGCCTGCCCGGATC...AATGGGGGCGAGGCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | ATGACCATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTACAGCAGCGTTGCATTaGGAACCAGGCCTGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MTMMAESPCFPCRFCCLPTAALH*EPGLRP Trigger: AGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGT...AGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCATGGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CAA 72 bp | AGACAATTAAATGTCCATTCCTCTGGTGCTGACTGCTaGTGGTGTCCGGGTCCCTGCCTGGCAGAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: RQLNVHSSGADC*WCPGPCLAEAD Trigger: ATCTGCCTCTGCCAGGCAGGGACCCGGACACCACAAGCAGTCAGCACCAGAGGAATGGACATTTAATTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTGCGTCGGATTATACACTTaGGAAGCCTGTTCAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: RQIVLVVFGLSQGCRCVCVGLYT*EACSGI Trigger: AATTCCTGAACAGGCTTCCCAAGTGTATAATCCGAC...GCACACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CCA 90 bp | AAGTATCCATGTGAGCTTGTGGATCTACATGCATCTGGTTGTCTTCAGAGGCCTTCCACTATGATCTCCTaGATCCGGGCAGGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: KYPCELVDLHASGCLQRPSTMIS*IRAGIG Trigger: CCCAATGCCTGCCCGGATCCAGGAGATCATAGTGGA...AGGCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCACATGGATACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR TCA 90 bp | GCAGCAGTATTAGATTGGGTCCATGGGGGTAGTTGTGGCACTGGTTTTGTGCACAGAGATCTTCTCTTCTaGGTCTTGGCCATCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVLDWVHGGSCGTGFVHRDLLF*VLAIIP Trigger: TGGAATGATGGCCAAGACTCAGAAGAGAAGATCTCT...GTGCACAAAACCAGTGCCACAACTACCCCCATGGACCCAATCTAATACTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| 3UTR CAA 72 bp | TTTTGTGCACACTCTGGAGAAAGTATCCATGTGAGCTaGTGGATCTACATGCATCTGGTTGTCTTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCAHSGESIHVS*WIYMHLVVFRG Trigger: GCCTCTGAAGACAACCAGATGCATGTAGATCCACAAGCTCACATGGATACTTTCTCCAGAGTGTGCACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS CCA 90 bp | GGCTCTAGGGTACGGAACCGAGCCCCACCAGGCACCGGAGTCACCTaGGCCTCTCCCTCCACCAGCTCACTCAGATCCTGTAGACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRVRNRAPPGTGVT*ASPSTSSLRSCRLA Trigger: GGCCAGTCTACAGGATCTGAGTGAGCTGGTGGAGGGAGAGGCCCAGGTGACTCCGGTGCCTGGTGGGGCTCGGTTCCGTACCCTAGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS GCA 90 bp | CGCAGGTCACTTACCTTCAAGATGCCAGCAGAGGGCACTGTCAGCTaGTCAGCTTGGGGGAGCCTCGTGGCCTCCTCACTGCGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLTFKMPAEGTVS*SAWGSLVASSLRSQ Trigger: CTGGGACCGCAGTGAGGAGGCCACGAGGCTCCCCCAAGCTGAGCAGCTGACAGTGCCCTCTGCTGGCATCTTGAAGGTAAGTGACCTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
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| CDS CCA 90 bp | GGTTCGACAGCAGGGCTCTGCGGGTCCGCAACAGCAGCGTTGCATTaGGAACCAGGCCTGCGGCCTGCAGAGTCACTGTATCGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSTAGLCGSATAALH*EPGLRPAESLYRPG Trigger: ACCAGGACGATACAGTGACTCTGCAGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGCTGTCGAACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS-3UTR CAA 90 bp | TGGAGAACAGGAACCCAGGGGACAAAGAGTCAGTGGCTATGCCGGCTGGGGCTCGGATCCGGGCAGGCATaGGGCAGCAGTTCTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WRTGTQGTKSQWLCRLGLGSGQA*GSSSAR Trigger: CCTTGCAGAACTGCTGCCCAATGCCTGCCCGGATCC...GAGCCCCAGCCGGCATAGCCACTGACTCTTTGTCCCCTGGGTTCCTGTTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS TCA 90 bp | CCTGGCTCCTCTGCCGCTCAGAAGCCAAGGCAGGTGTCTCCACTATaGTCTCCTGGATCCGGGCAGGCATTGGGCAGCAGTTCTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSSAAQKPRQVSPL*SPGSGQALGSSSAR Trigger: CCTTGCAGAACTGCTGCCCAATGCCTGCCCGGATCCAGGAGATCATAGTGGAGACACCTGCCTTGGCTTCTGAGCGGCAGAGGAGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 90 bp | GAGCCTGAAGTCTCCTCCACCCTGTCTGTGACCTTGCGCATTTTCTaGCGGCCCACCACACGACCCTCACCTGGGAATTGGCCCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: EPEVSSTLSVTLRIF*RPTTRPSPGNWPRP Trigger: TGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTCGCCCCCATTGAGGCTCCCCTGACCCAGCTGAGACAGAGAATGTCAGGCACCTTCCGCGTCTaGCTAAGAGAGGCCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLAPIEAPLTQLRQRMSGTFRV*LREARG Trigger: ACCTCTGGCCTCTCTTAGCAAGACGCGGAAGGTGCC...TGACATTCTCTGTCTCAGCTGGGTCAGGGGAGCCTCAATGGGGGCGAGGCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGTCCGCAACAGCAGCGTaGCATTGGGAACCAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRQIVLVVFGLSQGCRCVSATAA*HWEPGL Trigger: CAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCGGA...CACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS TCA 90 bp | GTTCAGCAGTCATCCTGGAGCCTGAAGTCTCCTCCACCCTGTCTGTaGCCTTGCGCATTTTCTGCCGGCCCACCACACGACCCTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQQSSWSLKSPPPCL*PCAFSAGPPHDPHL Trigger: CAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAGGATGACTGCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 90 bp | GACAGCATCTCGTCGTTCTGGGCCTGCAACTGCTGCTCCAGCTCCTaGAGCTTCCTGGTCATGGAGGCCATCAGCTCTGAGTCATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSISSFWACNCCSSS*SFLVMEAISSESWG Trigger: ACCCCATGACTCAGAGCTGATGGCCTCCATGACCAGGAAGCTGCAGGAGCTGGAGCAGCAGTTGCAGGCCCAGAACGACGAGATGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CCA 90 bp | TCCAGCTCCTCCTGCCTCTGCAGGGCTGCATTGTTCTGGTGCTGCTaGAGGGTCTGTACCAAATCCTCCAGGTCCAGGATCTTCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSCLCRAALFWCC*RVCTKSSRSRIFRS Trigger: GGAGCGGAAGATCCTGGACCTGGAGGATTTGGTACAGACCCTCCAGCAGCACCAGAACAATGCAGCCCTGCAGAGGCAGGAGGAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CCA 90 bp | CCAGGCCTGCGGCCTGCAGAGTCACTGTATCGTCCTGGTAGACCGTaGGCGGGAAGGTGCTCAAGATCTCAAAGGCAGCTGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PGLRPAESLYRPGRP*AGRCSRSQRQLNPC Trigger: ACATGGATTCAGCTGCCTTTGAGATCTTGAGCACCTTCCCGCCCACGGTCTACCAGGACGATACAGTGACTCTGCAGGCCGCAGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 90 bp | GGAGGGTCTGTACCAAATCCTCCAGGTCCAGGATCTTCCGCTCCTTaGACAGCATCTCGTCGTTCTGGGCCTGCAACTGCTGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSVPNPPGPGSSAP*TASRRSGPATAAPA Trigger: AGCTGGAGCAGCAGTTGCAGGCCCAGAACGACGAGATGCTGTCCAAGGAGCGGAAGATCCTGGACCTGGAGGATTTGGTACAGACCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGATAGTTCTGGTGGTGTTTGGACTGTCCCAGGGCTGCCGCTGCGTGAGACTGGCCATCAGTTaGTCAAAGTCCACCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRQIVLVVFGLSQGCRCVRLAIS*SKSTSG Trigger: CCCCGAGGTGGACTTTGACAAACTGATGGCCAGTCT...CACGCAGCGGCAGCCCTGGGACAGTCCAAACACCACCAGAACTATCTGCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS GCA 90 bp | ACGTCGCCAATGGTATCCTCAGGCCACATCATCAGCAGGAAGGCCTaGTCTCCGTTCTCGGACTTGATGCGAAGCATGGAGAGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPMVSSGHIISRKA*SPFSDLMRSMESRG Trigger: GCCTCTGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGATGTGGCCTGAGGATACCATTGGCGACGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 90 bp | CCTGCAGAGTCACTGTATCGTCCTGGTAGACCGTGGGCGGGAAGGTaGTCAAGATCTCAAAGGCAGCTGAATCCATGTCCCTGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAESLYRPGRPWAGR*SRSQRQLNPCPWPV Trigger: CACAGGCCAGGGACATGGATTCAGCTGCCTTTGAGATCTTGAGCACCTTCCCGCCCACGGTCTACCAGGACGATACAGTGACTCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 90 bp | TGTGACCTTGCGCATTTTCTGCCGGCCCACCACACGACCCTCACCTaGGAATTGGCCCAGACCATCCTCTGGGTAGATCTGATTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CDLAHFLPAHHTTLT*ELAQTILWVDLISQ Trigger: CTGCGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CCA 90 bp | ATGCGAAGCATGGAGAGCAGAGGCATTGGCATGTCAGGTGACTCCTaGCTCCTCTGCCGCTCAGAAGCCAAGGCAGGTGTCTCCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: MRSMESRGIGMSGDS*LLCRSEAKAGVSTM Trigger: CATAGTGGAGACACCTGCCTTGGCTTCTGAGCGGCAGAGGAGCCAGGAGTCACCTGACATGCCAATGCCTCTGCTCTCCATGCTTCGCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS TCA 90 bp | CAGGCCACATCATCAGCAGGAAGGCCTGCTCTCCGTTCTCGGACTTaGTGCGAAGCATGGAGAGCAGAGGCATTGGCATGTCAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: QATSSAGRPALRSRT*CEAWRAEALACQVT Trigger: AGTCACCTGACATGCCAATGCCTCTGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGATGTGGCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 90 bp | CATCCTCTGGGTAGATCTGATTTCGCAGGTCACTTACCTTCAAGATaGCAGCAGAGGGCACTGTCAGCTGCTCAGCTTGGGGGAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HPLGRSDFAGHLPSR*QQRALSAAQLGGAS Trigger: CGAGGCTCCCCCAAGCTGAGCAGCTGACAGTGCCCTCTGCTGGCATCTTGAAGGTAAGTGACCTGCGAAATCAGATCTACCCAGAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
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| CDS CCA 90 bp | GCCCACCACACGACCCTCACCTGGGAATTGGCCCAGACCATCCTCTaGGTAGATCTGATTTCGCAGGTCACTTACCTTAAAGGGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AHHTTLTWELAQTIL*VDLISQVTYLKGDS Trigger: GGAGTCCCCTTTAAGGTAAGTGACCTGCGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 90 bp | GCCCACCACACGACCCTCACCTGGGAATTGGCCCAGACCATCCTCTaGGTAGATCTGATTTCGCAGGTCACTTACCTTCAAGATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHHTTLTWELAQTIL*VDLISQVTYLQDAS Trigger: GCTGGCATCTTGAAGGTAAGTGACCTGCGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
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| CDS TCA 90 bp | ACTTACCTTAAAGGGGACTCCATCAGGATACAGCCTCTGCAGCTCTaGGGGAAAGAAGCCATCCAGTATGTCCCGGAGGCAGCGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TYLKGDSIRIQPLQL*GKEAIQYVPEAALR Trigger: ACGCAGCGCTGCCTCCGGGACATACTGGATGGCTTCTTTCCCTCAGAGCTGCAGAGGCTGTATCCTGATGGAGTCCCCTTTAAGGTAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS GCA 90 bp | CGCAGGTCACTTACCTTAAAGGGGACTCCATCAGGATACAGCCTCTaGAGCTCTGAGGGAAAGAAGCCATCCAGTATGTCCCGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLTLKGTPSGYSL*SSEGKKPSSMSRRQ Trigger: CTGCCTCCGGGACATACTGGATGGCTTCTTTCCCTCAGAGCTGCAGAGGCTGTATCCTGATGGAGTCCCCTTTAAGGTAAGTGACCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 90 bp | GCGGGAAGGTGCTCAAGATCTCAAAGGCAGCTGAATCCATGTCCCTaGCCTGTGCTAAGAGTTTCCGCACGTCGCCAATGGTATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRCSRSQRQLNPCP*PVLRVSARRQWYPQ Trigger: CTGAGGATACCATTGGCGACGTGCGGAAACTCTTAGCACAGGCCAGGGACATGGATTCAGCTGCCTTTGAGATCTTGAGCACCTTCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS-3UTR CAA 90 bp | ATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTGCCTGCTCTCCGTTCTCGGACTaGATGCGAAGCATGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MMAESPCFPCRFCCLPACSPFSD*MRSMES Trigger: GCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGA...GCAGGCAGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS TCA 90 bp | CTTGGGAAGCCTGTTCAGGAATTGTTCAGCAGTCATCCTGGAGCCTaGAGTCTCCTCCACCCTGTCTGTGACCTTGCGCATTTTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGKPVQELFSSHPGA*SLLHPVCDLAHFLP Trigger: CGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAGGATGACTGCTGAACAATTCCTGAACAGGCTTCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 90 bp | TCAGCTCTGAGTCATGGGGTCCTTGCCTACTCACAGGGGCACCGATaGCTCCATAGCAGGAAGGCAGAGAGATCTTCTCTTCTGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SALSHGVLAYSQGHR*LHSRKAERSSLLSL Trigger: AAGACTCAGAAGAGAAGATCTCTCTGCCTTCCTGCTATGGAGGCATCGGTGCCCCTGTGAGTAGGCAAGGACCCCATGACTCAGAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CCA 90 bp | TGGGGCCCCGGATGTCAATCACCTCGCCTTGTCGGATTATACACTTaGGAAGCCTGTTCAGGAATTGTTCAGCAGTCATCCTGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGPGCQSPRLVGLYT*EACSGIVQQSSWSL Trigger: CAGGCTCCAGGATGACTGCTGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCGGGGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTAAGCCCTGACGATGGCTGTCCCCAGCCACACCTTGGGGCATCCTCTAAGCCTGTTCAGGAATaGTTCAGCAGTCATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IVLSPDDGCPQPHLGASSKPVQE*FSSHPG Trigger: TCCAGGATGACTGCTGAACAATTCCTGAACAGGCTT...AGAGGATGCCCCAAGGTGTGGCTGGGGACAGCCATCGTCAGGGCTTAAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CAA 90 bp | ATGACCATGATGGCTGAGTCACCCTGTTTCCCATGTAGGTTCTGCTGTCTGCCTTGGAGAGCAGAGGCATaGGCATGTCAGGTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MTMMAESPCFPCRFCCLPWRAEA*ACQVTP Trigger: AGGAGTCACCTGACATGCCAATGCCTCTGCTCTCCA...AGGCAGACAGCAGAACCTACATGGGAAACAGGGTGACTCAGCCATCATGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS-3UTR CAA 90 bp | GCAGCAGTATTAGATTGGGTCCATGGGGGTAGTTGTGGCACTGGTTTTGTGCACGTCAATCACCTCGCCTaGTCGGATTATACACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVLDWVHGGSCGTGFVHVNHLA*SDYTLG Trigger: CCCAAGTGTATAATCCGACAAGGCGAGGTGATTGAC...GTGCACAAAACCAGTGCCACAACTACCCCCATGGACCCAATCTAATACTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070246.9 |
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| CDS CCA 72 bp | AGGGCACTGTCAGCTGCTCAGCTTGGGGGAGCCTCGTaGCCTCCTCACTGCGGTCCCAGCTCCCCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RALSAAQLGGAS*PPHCGPSSPSC Trigger: GCAGGAGGGGGAGCTGGGACCGCAGTGAGGAGGCCACGAGGCTCCCCCAAGCTGAGCAGCTGACAGTGCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
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| CDS GCA 72 bp | AGCCTGGGCGGGAGATGGGGTTCGACAGCAGGGCTCTaGGGGTCCGCAACAGCAGCGTTGCATTGGGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SLGGRWGSTAGL*GSATAALHWEP Trigger: TGGTTCCCAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGCTGTCGAACCCCATCTCCCGCCCAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 72 bp | GTACGGAACCGAGCCCCACCAGGCACCGGAGTCACCTaGGCCTCTCCCTCCACCAGCTCACTCAGATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VRNRAPPGTGVT*ASPSTSSLRSC Trigger: ACAGGATCTGAGTGAGCTGGTGGAGGGAGAGGCCCAGGTGACTCCGGTGCCTGGTGGGGCTCGGTTCCGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 72 bp | TCGACAGCAGGGCTCTGCGGGTCCGCAACAGCAGCGTaGCATTGGGAACCAGGCCTGCGGCCTGCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: STAGLCGSATAA*HWEPGLRPAES Trigger: TGACTCTGCAGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGCTGTCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 90 bp | GGGTTCGACAGCAGGGCTCTGCGGGTCCGCAACAGCAGCGTTGCATaGGGAACCAGGCCTGCGGCCTGCAGAGTCACTGTATCGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFDSRALRVRNSSVA*GTRPAACRVTVSSW Trigger: CCAGGACGATACAGTGACTCTGCAGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGCTGTCGAACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
||
| CDS CCA 72 bp | GCAGGGCTCTGCGGGTCCGCAACAGCAGCGTTGCATTaGGAACCAGGCCTGCGGCCTGCAGAGTCACTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: AGLCGSATAALH*EPGLRPAESLY Trigger: ATACAGTGACTCTGCAGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 90 bp | ACTTACCTTCAAGATGCCAGCAGAGGGCACTGTCAGCTGCTCAGCTaGGGGGAGCCTCGTGGCCTCCTCACTGCGGTCCCAGCTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TYLQDASRGHCQLLS*GEPRGLLTAVPAPP Trigger: AGGGGGAGCTGGGACCGCAGTGAGGAGGCCACGAGGCTCCCCCAAGCTGAGCAGCTGACAGTGCCCTCTGCTGGCATCTTGAAGGTAAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
||
| CDS TCA 72 bp | CCATGGGCTCGCCCACCCACTGCAGGCCATAGTCGCTaGGAAACCGCTCCATCTCACCAATCTGCCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWARPPTAGHSR*ETAPSHQSAAA Trigger: TGCAGCGGCAGATTGGTGAGATGGAGCGGTTTCTCAGCGACTATGGCCTGCAGTGGGTGGGCGAGCCCATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
||
| CDS GCA 72 bp | TCGTCGTTCTGGGCCTGCAACTGCTGCTCCAGCTCCTaGAGCTTCCTGGTCATGGAGGCCATCAGCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSFWACNCCSSS*SFLVMEAISSE Trigger: CTCAGAGCTGATGGCCTCCATGACCAGGAAGCTGCAGGAGCTGGAGCAGCAGTTGCAGGCCCAGAACGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
||
| CDS GCA 72 bp | CTTACCTTCAAGATGCCAGCAGAGGGCACTGTCAGCTaGTCAGCTTGGGGGAGCCTCGTGGCCTCCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LTFKMPAEGTVS*SAWGSLVASSL Trigger: CAGTGAGGAGGCCACGAGGCTCCCCCAAGCTGAGCAGCTGACAGTGCCCTCTGCTGGCATCTTGAAGGTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
||
| CDS CCA 72 bp | GCGCATTTTCTGCCGGCCCACCACACGACCCTCACCTaGGAATTGGCCCAGACCATCCTCTGGGTAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHFLPAHHTTLT*ELAQTILWVDL Trigger: CAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
||
| CDS CAA 72 bp | CTGGAGCCTGAAGTCTCCTCCACCCTGTCTGTGACCTaGCGCATTTTCTGCCGGCCCACCACACGACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LEPEVSSTLSVT*RIFCRPTTRPS Trigger: TGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CAA 90 bp | GCAGTCATCCTGGAGCCTGAAGTCTCCTCCACCCTGTCTGTGACCTaGCGCATTTTCTGCCGGCCCACCACACGACCCTCACCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: AVILEPEVSSTLSVT*RIFCRPTTRPSPGN Trigger: ATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAGGATGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS TCA 72 bp | TCATCCTGGAGCCTGAAGTCTCCTCCACCCTGTCTGTaGCCTTGCGCATTTTCTGCCGGCCCACCACACGAC | + |
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Preference number: 6 (lower is better) Translates to: SSWSLKSPPPCL*PCAFSAGPPHD Trigger: GTCGTGTGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 72 bp | AGCTCCTCCTGCCTCTGCAGGGCTGCATTGTTCTGGTaGTGCTGGAGGGTCTGTACCAAATCCTCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSCLCRAALFW*CWRVCTKSSRS Trigger: GGACCTGGAGGATTTGGTACAGACCCTCCAGCAGCACCAGAACAATGCAGCCCTGCAGAGGCAGGAGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CCA 72 bp | ATGGAGAGCAGAGGCATTGGCATGTCAGGTGACTCCTaGCTCCTCTGCCGCTCAGAAGCCAAGGCAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: MESRGIGMSGDS*LLCRSEAKAGV Trigger: GACACCTGCCTTGGCTTCTGAGCGGCAGAGGAGCCAGGAGTCACCTGACATGCCAATGCCTCTGCTCTCCAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CCA 72 bp | CGGCCTGCAGAGTCACTGTATCGTCCTGGTAGACCGTaGGCGGGAAGGTGCTCAAGATCTCAAAGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPAESLYRPGRP*AGRCSRSQRQL Trigger: CAGCTGCCTTTGAGATCTTGAGCACCTTCCCGCCCACGGTCTACCAGGACGATACAGTGACTCTGCAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 90 bp | TGGAGGGTCTGTACCAAATCCTCCAGGTCCAGGATCTTCCGCTCCTaGGACAGCATCTCGTCGTTCTGGGCCTGCAACTGCTGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WRVCTKSSRSRIFRS*DSISSFWACNCCSS Trigger: GCTGGAGCAGCAGTTGCAGGCCCAGAACGACGAGATGCTGTCCAAGGAGCGGAAGATCCTGGACCTGGAGGATTTGGTACAGACCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CAA 90 bp | CTTGCGCATTTTCTGCCGGCCCACCACACGACCCTCACCTGGGAATaGGCCCAGACCATCCTCTGGGTAGATCTGATTTCGCAGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LAHFLPAHHTTLTWE*AQTILWVDLISQVT Trigger: AGTGACCTGCGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAAATGCGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CCA 72 bp | CCCTGGCCTGTGCTAAGAGTTTCCGCACGTCGCCAATaGTATCCTCAGGCCACATCATCAGCAGGAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PWPVLRVSARRQ*YPQATSSAGRP Trigger: AGGCCTTCCTGCTGATGATGTGGCCTGAGGATACCATTGGCGACGTGCGGAAACTCTTAGCACAGGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CCA 72 bp | TCCTGCCTCTGCAGGGCTGCATTGTTCTGGTGCTGCTaGAGGGTCTGTACCAAATCCTCCAGGTCCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SCLCRAALFWCC*RVCTKSSRSRI Trigger: GATCCTGGACCTGGAGGATTTGGTACAGACCCTCCAGCAGCACCAGAACAATGCAGCCCTGCAGAGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074690.11 ENSMUST00000156750.2 |
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| CDS CAA 72 bp | TTTCTGCCGGCCCACCACACGACCCTCACCTGGGAATaGGCCCAGACCATCCTCTGGGTAGATCTGATTTCG | + |
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Preference number: 6 (lower is better) Translates to: FLPAHHTTLTWE*AQTILWVDLIS Trigger: CGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTGTGGTGGGCCGGCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CAA 90 bp | TCAGGCCACATCATCAGCAGGAAGGCCTGCTCTCCGTTCTCGGACTaGATGCGAAGCATGGAGAGCAGAGGCATTGGCATGTCAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SGHIISRKACSPFSD*MRSMESRGIGMSGD Trigger: GTCACCTGACATGCCAATGCCTCTGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGATGTGGCCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS TCA 72 bp | AAAGGGGACTCCATCAGGATACAGCCTCTGCAGCTCTaGGGGAAAGAAGCCATCCAGTATGTCCCGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: KGDSIRIQPLQL*GKEAIQYVPEA Trigger: TGCCTCCGGGACATACTGGATGGCTTCTTTCCCTCAGAGCTGCAGAGGCTGTATCCTGATGGAGTCCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS TCA 72 bp | TCATCAGCAGGAAGGCCTGCTCTCCGTTCTCGGACTTaGTGCGAAGCATGGAGAGCAGAGGCATTGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: SSAGRPALRSRT*CEAWRAEALAC Trigger: ACATGCCAATGCCTCTGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 72 bp | ATGGTATCCTCAGGCCACATCATCAGCAGGAAGGCCTaGTCTCCGTTCTCGGACTTGATGCGAAGCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: MVSSGHIISRKA*SPFSDLMRSME Trigger: CTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGATGTGGCCTGAGGATACCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 72 bp | TCACTGTATCGTCCTGGTAGACCGTGGGCGGGAAGGTaGTCAAGATCTCAAAGGCAGCTGAATCCATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLYRPGRPWAGR*SRSQRQLNPCP Trigger: GGGACATGGATTCAGCTGCCTTTGAGATCTTGAGCACCTTCCCGCCCACGGTCTACCAGGACGATACAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 72 bp | GTCCCTGATGGGGCCCCGGATGTCAATCACCTCGCCTaGTCGGATTATACACTTGGGAAGCCTGTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VPDGAPDVNHLA*SDYTLGKPVQE Trigger: TTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCGGGGCCCCATCAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CAA 72 bp | ATCATCAGCAGGAAGGCCTGCTCTCCGTTCTCGGACTaGATGCGAAGCATGGAGAGCAGAGGCATTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: IISRKACSPFSD*MRSMESRGIGM Trigger: CATGCCAATGCCTCTGCTCTCCATGCTTCGCATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CAA 90 bp | CTGCAAGGTGTCCCTGATGGGGCCCCGGATGTCAATCACCTCGCCTaGTCGGATTATACACTTGGGAAGCCTGTTCAGGAATTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LQGVPDGAPDVNHLA*SDYTLGKPVQELFS Trigger: GCTGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCGGGGCCCCATCAGGGACACCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS GCA 72 bp | GGTAGATCTGATTTCGCAGGTCACTTACCTTCAAGATaGCAGCAGAGGGCACTGTCAGCTGCTCAGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GRSDFAGHLPSR*QQRALSAAQLG Trigger: CCCAAGCTGAGCAGCTGACAGTGCCCTCTGCTGGCATCTTGAAGGTAAGTGACCTGCGAAATCAGATCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151113.2 |
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| CDS CCA 72 bp | TGCTCAAGATCTCAAAGGCAGCTGAATCCATGTCCCTaGCCTGTGCTAAGAGTTTCCGCACGTCGCCAATGG | + |
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Preference number: 6 (lower is better) Translates to: CSRSQRQLNPCP*PVLRVSARRQW Trigger: CCATTGGCGACGTGCGGAAACTCTTAGCACAGGCCAGGGACATGGATTCAGCTGCCTTTGAGATCTTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 |
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| CDS CAA 90 bp | ATGGGGCCCCGGATGTCAATCACCTCGCCTTGTCGGATTATACACTaGGGAAGCCTGTTCAGGAATTGTTCAGCAGTCATCCTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: MGPRMSITSPCRIIH*GSLFRNCSAVILEP Trigger: AGGCTCCAGGATGACTGCTGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCGGGGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CCA 72 bp | GGATGTCAATCACCTCGCCTTGTCGGATTATACACTTaGGAAGCCTGTTCAGGAATTGTTCAGCAGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: GCQSPRLVGLYT*EACSGIVQQSS Trigger: GGATGACTGCTGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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| CDS CAA 72 bp | CGGATGTCAATCACCTCGCCTTGTCGGATTATACACTaGGGAAGCCTGTTCAGGAATTGTTCAGCAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: RMSITSPCRIIH*GSLFRNCSAVI Trigger: GATGACTGCTGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070246.9 ENSMUST00000074690.11 ENSMUST00000151113.2 |
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