Pregenerated sensors for UBXN10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043621Ensembl transcript IDs: ENSMUST00000105809.2, ENSMUST00000105810.8, ENSMUST00000105811.9, ENSMUST00000146415.2
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAAGAAGCCCCAACGAGCTGCCTTCCTTCTCCTACGGAGGCCCTaGCACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: GKKPQRAAFLLLRRP*HQSPLWGHWPSTFD Trigger: GTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGGGCCTCCGTAGGAGAAGGAAGGCAGCTCGTTGGGGCTTCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR GCA 90 bp | TCCCTTTGCTGCCACCTCATACCAACAGGGACCCTCGTGGGTCTCTaGTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: SLCCHLIPTGTLVGL*WCSLGGRLRPNTAL Trigger: CAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCAGCAAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR TCA 90 bp | AACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGAGGCTTCAGGTTGCCCAACGTTCGT | + |
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Preference number: 1 (lower is better) Translates to: NKALGVLADLGSRGT*NQGCVGGFRLPNVR Trigger: ACGAACGTTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR TCA 90 bp | ACCGCCACAGACTTGCTATACGAACAAGGCCCTAGGGGTCTTGGCTaGCCTGGGCTCTCGTGGCACCTGAAACCAAGGTTGCGTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TATDLLYEQGPRGLG*PGLSWHLKPRLRWR Trigger: CCTCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCAAGTCTGTGGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | TGCTGCCACCTCATACCAACAGGGACCCTCGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: CCHLIPTGTLVGLCW*SLGGRLRPNTALQE Trigger: TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CCA 90 bp | ATAGCTCTTCCCTTTGCTGCCACCTCATACCAACAGGGACCCTCGTaGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACA | + |
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Preference number: 1 (lower is better) Translates to: IALPFAATSYQQGPS*VSAGAAWEGGCVQT Trigger: TGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | TACCAGTCCCTTCTGTCGTGGTCACTGGTGGAGGAGGTGGCCAGTTaGATGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTGACCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: YQSLLSWSLVEEVAS*MGLPPQSQVPADLC Trigger: GCAAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCATGCAACTGGCCACCTCCTCCACCAGTGACCACGACAGAAGGGACTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CCA 90 bp | GTTCAAGCTACCAGTCCCTTCTGTCGTGGTCACTGGTGGAGGAGGTaGCCAGTTGCATGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: VQATSPFCRGHWWRR*PVAWACHLKVKFQL Trigger: CAGCTGGAACTTGACTTTGAGGTGGCAGGCCCATGCAACTGGCCACCTCCTCCACCAGTGACCACGACAGAAGGGACTGGTAGCTTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR GCA 90 bp | AGAGGTCTCTTCCTGTGTGTGGATTCATCCCCACCGCCACAGACTTaGTATACGAACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RGLFLCVDSSPPPQT*YTNKALGVLADLGS Trigger: AGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCAAGTCTGTGGCGGTGGGGATGAATCCACACACAGGAAGAGACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | TGTGCTGAGGGATTTGCGACAGCAGAAGATAGCTCTTCCCTTTGCTaGCACCTCATACCAACAGGGACCCTCGTGGGTCTCTGCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: CAEGFATAEDSSSLC*HLIPTGTLVGLCWC Trigger: GCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCTATCTTCTGCTGTCGCAAATCCCTCAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | TCAGTACCCAGGACATGTGGTACTCAGGCTCCAAGGGGGACAAAGTaGCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGC | + |
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Preference number: 1 (lower is better) Translates to: SVPRTCGTQAPRGTK*PEGLSVPDSKWGFG Trigger: GCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATGTCCTGGGTACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CCA 90 bp | TCCAACCGTCAGTCCACTCAAAAGCAGCCCTGGCTGGTCCATGGCTaGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGTGTTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SNRQSTQKQPWLVHG*RGHFYGPLALRCFR Trigger: TCTGAAACACCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGTGGACTGACGGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CCA 90 bp | AAGCTCCAACCGTCAGTCCACTCAAAAGCAGCCCTGGCTGGTCCATaGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KLQPSVHSKAALAGP*LERPFLWASSSKVF Trigger: AAACACCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGTGGACTGACGGTTGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | TTACAGCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTaGCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGGTGTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: LQLYRVLAKSPSCFH*LGLHSGSKPLWCDL Trigger: CAGGTCACACCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | CACTCATGCTTACAGCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTaGTTCCATTGCCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGG | + |
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Preference number: 1 (lower is better) Translates to: HSCLQLYRVLAKSPS*FHCLGLHSGSKPLW Trigger: CCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGCTGTAAGCATGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR CCA 90 bp | TCAAAAGCAGCCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATaGGCCTCTAGCTCTAAGGTGTTTCAGAGATGTGTGCTGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SKAALAGPWLERPFL*ASSSKVFQRCVLRD Trigger: ATCCCTCAGCACACATCTCTGAAACACCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR TCA 90 bp | GTGTCCCGTGCACAAAATGCCCCTGTTACTGAGGTAGTGACACTTTaGGATGCTCCAACAACTCCTAAACCCTGCCTTGTCTGGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: VSRAQNAPVTEVVTL*DAPTTPKPCLVWVL Trigger: CAGTACCCAGACAAGGCAGGGTTTAGGAGTTGTTGGAGCATCTCAAAGTGTCACTACCTCAGTAACAGGGGCATTTTGTGCACGGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CCA 90 bp | GACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATCCTaGCCGCAGCCACAGTCTAGGGATGGATGTAGAACTTCCTCATGG | + |
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Preference number: 1 (lower is better) Translates to: DRRFWKEPAVESRLS*PQPQSRDGCRTSSW Trigger: CCATGAGGAAGTTCTACATCCATCCCTAGACTGTGGCTGCGGCCAGGATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR TCA 90 bp | TGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACAGGTaGTACCAAAGAAGCTCCAACCGTCAGTCCACTCAAAAGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CVVYFHFGRILHIDR*YQRSSNRQSTQKQP Trigger: GGGCTGCTTTTGAGTGGACTGACGGTTGGAGCTTCTTTGGTATCACCTGTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 90 bp | AAATTGTGCAGAAGCGTAGCTGTGTGCATCTTAAAAACAGGGTGCTaGGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: KLCRSVAVCILKTGC*VVYFHFGRILHIDR Trigger: CCTGTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAAGATGCACACAGCTACGCTTCTGCACAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR TCA 90 bp | TGTAGGCTTAACTGTCGCTACACTATTGCGATGTGTGGTCGTGGATaGAGAAAACAGATAGCTGTGTTTGATCAAAACACTTCCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: CRLNCRYTIAMCGRG*RKQIAVFDQNTSKL Trigger: CAGCTTGGAAGTGTTTTGATCAAACACAGCTATCTGTTTTCTTCATCCACGACCACACATCGCAATAGTGTAGCGACAGTTAAGCCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR CCA 90 bp | TGTGTGCATCTTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTaGAAGGATCCTGCACATAGACAGGTGATACCAAAGAAGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: CVHLKNRVLRSLLPF*KDPAHRQVIPKKLQ Trigger: TTGGAGCTTCTTTGGTATCACCTGTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAAGATGCACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGGGACCCTCGTGGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCCCAGCGCCAGTGCCGTaGTCCCTAAGCCCCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: NRDPRGSLLVQLGREAASPAPVP*SLSPHL Trigger: CAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGG...GGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PWLVHGWRGHFYGPLALRVGLCW*SLGGRL Trigger: CAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCAC...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGACCCTCGTGGGTCTCTaGTGGTGCAGCTTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PWLVHGWRGHFYGPLALRTLVGL*WCSLGG Trigger: CCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGT...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCTTCCATTGCCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGGTGTGACGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SCFHCLGLHSGSKPLWCDVGLCW*SLGGRL Trigger: CAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCAC...GTCACACCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGACGCTGTGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: QPCCRALPQWWKVRAGRCGSRGT*NQGCVG Trigger: TCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCC...ACAGCGTCCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCACCTAGGGGTCTTGGCTaGCCTGGGCTCTCGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GVWGRMTLLRVITAVTKAPRGLG*PGLSWH Trigger: GTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGG...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAAGGGTCTTGGCTGACCTaGGCTCTCGTGGCACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LCWCSLGGRLRPNTALQEGSWLT*ALVAPE Trigger: TTCAGGTGCCACGAGAGCCCAGGTCAGCCAAGACCC...TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CAA 90 bp | CACCTCATACCAACAGGGACCCTCGTGGGTCTCTGCTGGTGCAGCTaGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: HLIPTGTLVGLCWCS*GGRLRPNTALQEMP Trigger: TGGCATTTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGCTCCTACGGAGGCCCTaGCACCAGAGCCCACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLLLRRP*HQSPLW Trigger: CCAAAGTGGGCTCTGGTGTCAGGGCCTCCGTAGGAG...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCGCCGGCTGCACAGCATaGCAGGGACACAGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFAGCTA*QGHREE Trigger: TTCTTCCCTGTGTCCCTGTCATGCTGTGCAGCCGGC...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR GCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLAVGLCW*SLGGRL Trigger: CAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCAC...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAGCGCCAGTGCCGTGGTCCCTAAGCCCCCACTTGTTTACTAGACGGGAAGTCTCTTCCTGTGTGTaGATTCATCCCCACCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: MPAPVPWSLSPHLFTRREVSSCV*IHPHRH Trigger: GTGGCGGTGGGGATGAATCCACACACAGGAAGAGAC...TTCCCGTCTAGTAAACAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCTCGTGGGTCTCTGCTaGTGCAGCTTGGGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLALVGLC*CSLGGR Trigger: CCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | TCTAGATCTAGGCAGGCTAGGAAGCCAGCGGCAGCCATGTTGCAGGGCTCTGCCGCCAAGTATTGGCTTTaGGAGACCCAGAGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: SRSRQARKPAAAMLQGSAAKYWL*ETQSSL Trigger: CAGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGC...GGCAGAGCCCTGCAACATGGCTGCCGCTGGCTTCCTAGCCTGCCTAGATCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVVGLCW*SLGGRL Trigger: CAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCAC...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCACAACAGGGACCCTCGTaGGTCTCTGCTGGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GVWGRMTLLRVITAVTKAQQGPS*VSAGAA Trigger: AGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTG...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCAACAGGGACCCTCGTaGGTCTCTGCTGGTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLAQQGPS*VSAGAA Trigger: AGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCAAAAAGCAGCCCTGGCTaGTCCATGGCTGGAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GVWGRMTLLRVITAVTKAKSSPG*SMAGEA Trigger: GGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTT...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CAA 90 bp | CGCTGTGGAGAGAAGGCCACTCATGCTTACAGCTTTACAGAGTGCTaGCCAAAAGTCCGTCCTGCTTCCATTGCCTGGGCCTCCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: RCGEKATHAYSFTEC*PKVRPASIAWASTV Trigger: CACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGCTGTAAGCATGAGTGGCCTTCTCTCCACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRDGCRTSSWLPERMWGYGSRGT*NQGCVG Trigger: TCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCC...GTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLAGSRGT*NQGCVG Trigger: TCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCC...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGCTCCTACGGAGGCCCTaGCACCAGAGCCCACTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KVKFQLTFAIKGATNLGRLLRRP*HQSPLW Trigger: CCAAAGTGGGCTCTGGTGTCAGGGCCTCCGTAGGAG...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCGGCAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGAGAAGCGTAGCTGTGTaGATCTTAAAAACAGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PAAAMLQGSATMVEGQSWRSVAV*ILKTGC Trigger: GCACCCTGTTTTTAAGATGCACACAGCTACGCTTCT...CCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGGTCTCTTCCTGTGTGTaGATTCATCCCCACCGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLVSSCV*IHPHRH Trigger: GTGGCGGTGGGGATGAATCCACACACAGGAAGAGAC...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAAATGTCCTAGTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTTCTGCTGGTGCAGCTTaGGAGGGAGGCTGCGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGNVLVQSDLCDVGGVWGSAGAA*EGGCVQ Trigger: TTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGA...ACCCCAGACACCTCCCACATCACACAGATCACTCTGGACTAGGACATTTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCACTCAAAAGCAGCCCTaGCTGGTCCATGGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFTQKQP*LVHGWR Trigger: TCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGT...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGACTGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VKFQLTFAIKGATNLGRTGSRGT*NQGCVG Trigger: TCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCC...AGTCCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAAGCCAAGTATTGGCTTTaGGAGACCCAGAGTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LCWCSLGGRLRPNTALQEAKYWL*ETQSSL Trigger: CAGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGC...TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGACGCTGTGCTTTACAGAGTGCTTaGCAAAAGTCCGTCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QPCCRALPQWWKVRAGRCALQSA*QKSVLL Trigger: AAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGC...ACAGCGTCCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAAAAACCAAGGTTGCGTTaGAGGCTTCAGGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCWCSLGGRLRPNTALQEKPRLR*RLQVAQ Trigger: TTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTT...TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCTTCCATTGCCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGGTGTGACAAACCAAGGTTGCGTTaGAGGCTTCAGGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SCFHCLGLHSGSKPLWCDKPRLR*RLQVAQ Trigger: TTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTT...GTCACACCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAGCGCCAGTGCCGTGGTCCCTAAGCCCCCACTTGTTTACTAGACGGGAAACTGACAGAAGATTCTaGAAGGAGCCAGCAGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: MPAPVPWSLSPHLFTRRETDRRF*KEPAVE Trigger: TTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGT...TTCCCGTCTAGTAAACAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGTGGCTGGTCCATGGCTaGAGAGGCCATTTCTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLWLVHG*RGHFYG Trigger: CCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCA...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCACTCTACAGTGCTTGTaGCAGCTCTGGCTAAGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVTLQCL*QLWLRR Trigger: CCGCCTTAGCCAGAGCTGTCACAAGCACTGTAGAGT...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGGTCCAAACACAGCATTaGAAGAAATGCCAGCGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLVQTQH*KKCQRQ Trigger: CTGGCGCTGGCATTTCTTGCAATGCTGTGTTTGGAC...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCAAGCTCTTCCCTTTGCTaGCACCTCATACCAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GVWGRMTLLRVITAVTKASSSLC*HLIPTG Trigger: CCCTGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCT...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGCTTCCATTGCCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGGTGTGACGATAGCTCTTCCCTTTaGTGCCACCTCATACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SCFHCLGLHSGSKPLWCDDSSSL*CHLIPT Trigger: TGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCTATC...GTCACACCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGAAACCAAGGTTGCGTTaGAGGCTTCAGGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GMDVELPHGCRRECGATTKPRLR*RLQVAQ Trigger: TTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTT...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACCCAGCGCCAGTGCCGTaGTCCCTAAGCCCCCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: KTGCCVVYFHFGRILHIDPAPVP*SLSPHL Trigger: CAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGG...GTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCGAGAGGCCATTTCTATaGGCCTCTAGCTCTAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFERPFL*ASSSKV Trigger: CACCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTC...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTCACCAAGGCATAGTGTGCTAGAAGGAACACCCATAACTGCTGGTGGTACTCAAAAGCAGCCCTaGCTGGTCCATGGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLSPRHSVLEGTPITAGGTQKQP*LVHGWR Trigger: TCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGT...ACCACCAGCAGTTATGGGTGTTCCTTCTAGCACACTATGCCTTGGTGACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCACTCAAAAGCAGCCCTaGCTGGTCCATGGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVTQKQP*LVHGWR Trigger: TCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGT...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAGATCTAGGCAGGCTAGGAAGCCAGCGGCAGCCATGTTGCAGGGCTCTGCCCACTATTGCGATGTGTaGTCGTGGATGAAGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SRSRQARKPAAAMLQGSAHYCDV*SWMKKT Trigger: TGTTTTCTTCATCCACGACCACACATCGCAATAGTG...GGCAGAGCCCTGCAACATGGCTGCCGCTGGCTTCCTAGCCTGCCTAGATCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR CAA 90 bp | GGCCCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTaGACAAGGTTGAGAGAGACGCTGAGGCTGGGAGATAAAATAATT | + |
|
Preference number: 2 (lower is better) Translates to: GPDTRAHFGVTGLPH*TRLRETLRLGDKII Trigger: AATTATTTTATCTCCCAGCCTCAGCGTCTCTCTCAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGGCCAAGTATTGGCTTTaGGAGACCCAGAGTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLAKYWL*ETQSSL Trigger: CAGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGC...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGCACATAGACAGGTaGTACCAAAGAAGCTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFLHIDR*YQRSSN Trigger: GTTGGAGCTTCTTTGGTATCACCTGTCTATGTGCAG...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGCCAGTTGCATGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTGACCTTTGAGGTAGTGACACTTTaGGATGCTCCAACAACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RWPVAWACHLKVKFQLTFEVVTL*DAPTTP Trigger: AGGAGTTGTTGGAGCATCTCAAAGTGTCACTACCTC...AAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCATGCAACTGGCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR GCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGTTGGAGGCTTCAGGTTaGCCAACGTTCGTTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GMDVELPHGCRRECGATTLEASG*PTFVLF Trigger: AAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAA...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGAGACCCAGAGTTCACTaGACTGACAGAAGATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLRPRVH*TDRRFW Trigger: CCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCT...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCAAACCAAGGTTGCGTTaGAGGCTTCAGGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLAKPRLR*RLQVAQ Trigger: TTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTT...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGACTGTGATCTGTGTGATGTaGGAGGTGTCTGGGGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VKFQLTFAIKGATNLGRTVICVM*EVSGVG Trigger: TCCTACCCCAGACACCTCCCACATCACACAGATCAC...AGTCCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTGCCTGGGCCTCCAAAAACACTTCCAAGCTaGTGTCAAGCCAAAAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALQSACQKSVLLPLPGPPKTLPS*CQAKSP Trigger: TGGGCTTTTGGCTTGACATCAGCTTGGAAGTGTTTT...TGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCGATAGCTCTTCCCTTTaGTGCCACCTCATACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: GQSAQKVSVFLTPNGDLADSSSL*CHLIPT Trigger: TGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCTATC...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGACTGACAGAAGATTCTaGAAGGAGCCAGCAGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLTDRRF*KEPAVE Trigger: TTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGT...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCAGACCCAGAGTTCACTaGACTGACAGAAGATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVRPRVH*TDRRFW Trigger: CCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCT...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACAAAAGCAGCCCTGGCTaGTCCATGGCTGGAGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LWQMICIPRKTRLYSACDKSSPG*SMAGEA Trigger: GGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTT...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGAAAATAATTTACCTGTaGTCAAGTAGGCCAAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLKIIYL*SSRPRG Trigger: ACCCCTTGGCCTACTTGAGCACAGGTAAATTATTTT...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATATCTGCTGGTGCAGCTTaGGAGGGAGGCTGCGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LKTGCCVVYFHFGRILHISAGAA*EGGCVQ Trigger: TTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGA...TATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATACAACAGGGACCCTCGTaGGTCTCTGCTGGTGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LKTGCCVVYFHFGRILHIQQGPS*VSAGAA Trigger: AGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTG...TATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGCACCAGAGCCCACTTTaGGGTCACTGGCCTTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RALANDLYPQKNKTLQCLHQSPL*GHWPST Trigger: TGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTG...CAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGGCTACAACGTAGTTTTCTAGAGAGGTCTCTTCCTGTGTGTGGATTCATCTTGGAGGCTTCAGGTTaGCCAACGTTCGTTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VGLQRSFLERSLPVCGFILEASG*PTFVLF Trigger: AAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAA...GATGAATCCACACACAGGAAGAGACCTCTCTAGAAAACTACGTTGTAGCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGAGCTCTTCCCTTTGCTaGCACCTCATACCAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RALANDLYPQKNKTLQCLSSSLC*HLIPTG Trigger: CCCTGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCT...CAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTGTCACCAAGGCATAGTGTGCTAGAAGGAACACCCATAACTGCTGGTGGTAAAATAATTTACCTGTaGTCAAGTAGGCCAAGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSPRHSVLEGTPITAGGKIIYL*SSRPRG Trigger: ACCCCTTGGCCTACTTGAGCACAGGTAAATTATTTT...ACCACCAGCAGTTATGGGTGTTCCTTCTAGCACACTATGCCTTGGTGACAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACGAGAGGCCATTTCTATaGGCCTCTAGCTCTAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KTGCCVVYFHFGRILHIDERPFL*ASSSKV Trigger: CACCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTC...GTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATTTGGAGGCTTCAGGTTaGCCAACGTTCGTTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FTALTEDSGRSQQWKVDYLEASG*PTFVLF Trigger: AAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAA...ATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACCTGCACATAGACAGGTaGTACCAAAGAAGCTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LWQMICIPRKTRLYSACDLHIDR*YQRSSN Trigger: GTTGGAGCTTCTTTGGTATCACCTGTCTATGTGCAG...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGTCCAAACACAGCATTaGAAGAAATGCCAGCGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKTGCCVVYFHFGRILHIVQTQH*KKCQRQ Trigger: CTGGCGCTGGCATTTCTTGCAATGCTGTGTTTGGAC...TATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACGATAGCTCTTCCCTTTaGTGCCACCTCATACCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LWQMICIPRKTRLYSACDDSSSL*CHLIPT Trigger: TGTTGGTATGAGGTGGCAGCAAAGGGAAGAGCTATC...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGAGTTTACTTCCATTTTaGAAGGATCCTGCACATAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVKFQLTFAIKGATNLGRSLLPF*KDPAHR Trigger: TCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACT...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGAGTTTACTTCCATTTTaGAAGGATCCTGCACATAGA | + |
|
Preference number: 2 (lower is better) Translates to: RALANDLYPQKNKTLQCLSLLPF*KDPAHR Trigger: TCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACT...CAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAGCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | GGCGGGAAGGGGCATTCCACGCCAGTGAGCCGGCTGCACAGCATGACAGGGACACTCTGCTGGTGCAGCTaGGGAGGGAGGCTGCGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGKGHSTPVSRLHSMTGTLCWCS*GGRLRP Trigger: TGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG...TGTCCCTGTCATGCTGTGCAGCCGGCTCACTGGCGTGGAATGCCCCTTCCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR CCA 72 bp | CCCTTTGCTGCCACCTCATACCAACAGGGACCCTCGTaGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PFAATSYQQGPS*VSAGAAWEGGC Trigger: GCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCAGCAAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR GCA 72 bp | TGCCACCTCATACCAACAGGGACCCTCGTGGGTCTCTaGTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CHLIPTGTLVGL*WCSLGGRLRPN Trigger: GTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR TCA 72 bp | CTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCTaGAACCAAGGTTGCGTTGGAGGCTTCAGGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGVLADLGSRGT*NQGCVGGFRLP Trigger: GGGCAACCTGAAGCCTCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | GTTGGAGGCTTCAGGTTGCCCAACGTTCGTTCTCTTTaGTCAAAGACCTGGGGCCCCTCGGCCTGGTGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGGFRLPNVRSL*SKTWGPSAWCG Trigger: TCCGCACCAGGCCGAGGGGCCCCAGGTCTTTGAGCAAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | CTCATACCAACAGGGACCCTCGTGGGTCTCTGCTGGTaGAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LIPTGTLVGLCW*SLGGRLRPNTA Trigger: TGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CCA 72 bp | CACCTCATACCAACAGGGACCCTCGTGGGTCTCTGCTaGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: HLIPTGTLVGLC*CSLGGRLRPNT Trigger: TGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTTGGTATGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | GGTCACTGGTGGAGGAGGTGGCCAGTTGCATGGGCCTaGCACCTCAAAGTCAAGTTCCAGCTGACCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHWWRRWPVAWA*HLKVKFQLTFA Trigger: GGCAAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCATGCAACTGGCCACCTCCTCCACCAGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR GCA 72 bp | GATCTAGGCAGGCTAGGAAGCCAGCGGCAGCCATGTTaGAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DLGRLGSQRQPC*RALPQWWKVRA Trigger: AGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCGCTGGCTTCCTAGCCTGCCTAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR CCA 72 bp | GAGGGTCCAAGTTCAAGCTACCAGTCCCTTCTGTCGTaGTCACTGGTGGAGGAGGTGGCCAGTTGCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EGPSSSYQSLLS*SLVEEVASCMG Trigger: GCCCATGCAACTGGCCACCTCCTCCACCAGTGACCACGACAGAAGGGACTGGTAGCTTGAACTTGGACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCAAGGCCCTAGGGGTCTaGGCTGACCTGGGCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFKALGV*ADLGSR Trigger: ACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTT...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCAAAGGCCCTAGGGGTCTaGGCTGACCTGGGCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: GVWGRMTLLRVITAVTKAKALGV*ADLGSR Trigger: ACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTT...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAAATGTCCTAGTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTCTCTGCTGGTGCAGCTaGGGAGGGAGGCTGCGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGNVLVQSDLCDVGGVWGLCWCS*GGRLRP Trigger: TGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG...ACCCCAGACACCTCCCACATCACACAGATCACTCTGGACTAGGACATTTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCAACACCAGAGCCCACTTaGGGGTCACTGGCCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GVWGRMTLLRVITAVTKATPEPT*GSLAFH Trigger: GTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGT...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR TCA 72 bp | GACTTGCTATACGAACAAGGCCCTAGGGGTCTTGGCTaGCCTGGGCTCTCGTGGCACCTGAAACCAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DLLYEQGPRGLG*PGLSWHLKPRL Trigger: CAACCTTGGTTTCAGGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CCA 72 bp | AGAAGCTCCAACCGTCAGTCCACTCAAAAGCAGCCCTaGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSSNRQSTQKQP*LVHGWRGHFYG Trigger: CCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGGCTGCTTTTGAGTGGACTGACGGTTGGAGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR CCA 72 bp | GAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTGCCTaGGCCTCCACAGTGGGTCTAAGCCTCTATGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ECLPKVRPASIA*ASTVGLSLYGV Trigger: CACACCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCAGCGCCAGTGCCGTGGTCCCTAAGCCCCCACTTGTTTACTAGACGGGAAGGCCAAGTATTGGCTTaGAGAGACCCAGAGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: MPAPVPWSLSPHLFTRREGQVLA*RDPEFT Trigger: AGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGCC...TTCCCGTCTAGTAAACAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGGGCCAAGTATTGGCTTaGAGAGACCCAGAGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PWLVHGWRGHFYGPLALRGQVLA*RDPEFT Trigger: AGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGCC...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | TACAGAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTaGCTGGGCCTCCACAGTGGGTCTAAGCCTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: YRVLAKSPSCFH*LGLHSGSKPLW Trigger: CCATAGAGGCTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | AGTCTGCCATCTCCTCCAAGCAGAGAAAATGTCATTTaGCTTGCACAGGGGACCTCTACGCCCACCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPSPPSRENVI*LAQGTSTPTQH Trigger: GTGCTGGGTGGGCGTAGAGGTCCCCTGTGCAAGGCAAATGACATTTTCTCTGCTTGGAGGAGATGGCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGCGTCCAAACACAGCATaGCAAGAAATGCCAGCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLRPNTA*QEMPAP Trigger: TGGCGCTGGCATTTCTTGCAATGCTGTGTTTGGACG...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR GCA 72 bp | GCACCTGAAACCAAGGTTGCGTTGGAGGCTTCAGGTTaGCCAACGTTCGTTCTCTTTGCTCAAAGACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: APETKVALEASG*PTFVLFAQRPG Trigger: CCCAGGTCTTTGAGCAAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTTCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| 3UTR GCA 72 bp | AGGACATGTGGTACTCAGGCTCCAAGGGGGACAAAGTaGCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RTCGTQAPRGTK*PEGLSVPDSKW Trigger: CCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CCA 72 bp | ACTCCTAAACCCTGCCTTGTCTGGGTACTGAGGGTATaGGAGGCATGTACCAGTCAGTACCCAGGACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TPKPCLVWVLRV*EACTSQYPGHV Trigger: CACATGTCCTGGGTACTGACTGGTACATGCCTCCCATACCCTCAGTACCCAGACAAGGCAGGGTTTAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR-3UTR CAA 90 bp | TGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCTGTGTGCTGAGGGATTaGCGACAGCAGAAGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WACHLKVKFQLTFAIKGACVLRD*RQQKIA Trigger: AGCTATCTTCTGCTGTCGCAAATCCCTCAGCACACA...GGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTGCCTGGGCCTCCATGTGTGCTGAGGGATTaGCGACAGCAGAAGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALQSACQKSVLLPLPGPPCVLRD*RQQKIA Trigger: AGCTATCTTCTGCTGTCGCAAATCCCTCAGCACACA...TGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR TCA 72 bp | GCTGGTGGTGTCCCGTGCACAAAATGCCCCTGTTACTaGGGTAGTGACACTTTGAGATGCTCCAACAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: AGGVPCTKCPCY*GSDTLRCSNNS Trigger: GGAGTTGTTGGAGCATCTCAAAGTGTCACTACCTCAGTAACAGGGGCATTTTGTGCACGGGACACCACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR GCA 72 bp | TTACAGCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTaGTTCCATTGCCTGGGCCTCCACAGTGGGTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQLYRVLAKSPS*FHCLGLHSGSK Trigger: CTTAGACCCACTGTGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | CAGCCACAGTCTAGGGATGGATGTAGAACTTCCTCATaGCTGCCGGAGAGAATGTGGGGCTACAACGTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QPQSRDGCRTSS*LPERMWGYNVV Trigger: AACTACGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCCTAGACTGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | TCTGCCACAATGGTGGAAGGTCAGAGCTGGACGCTGTaGAGAGAAGGCCACTCATGCTTACAGCTTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SATMVEGQSWTL*REGHSCLQLYR Trigger: TCTGTAAAGCTGTAAGCATGAGTGGCCTTCTCTCCACAGCGTCCAGCTCTGACCTTCCACCATTGTGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATAAGGCCCTAGGGGTCTaGGCTGACCTGGGCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: FTALTEDSGRSQQWKVDYKALGV*ADLGSR Trigger: ACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTT...ATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR TCA 72 bp | ACTCCAAATGGGGATTTGGCCGTCAAGGGACACAGATaGCTTGTGGGTGTCTGGCTGAACCTGCAATATGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPNGDLAVKGHR*LVGVWLNLQYE Trigger: CTCATATTGCAGGTTCAGCCAGACACCCACAAGTCATCTGTGTCCCTTGACGGCCAAATCCCCATTTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR GCA 72 bp | AGGCCAAGTATTGGCTTTGAGAGACCCAGAGTTCACTaGACTGACAGAAGATTCTGGAAGGAGCCAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RPSIGFERPRVH*TDRRFWKEPAV Trigger: CACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCCAATACTTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | TTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATCCTaGCCGCAGCCACAGTCTAGGGATGGATGTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: FWKEPAVESRLS*PQPQSRDGCRT Trigger: AGTTCTACATCCATCCCTAGACTGTGGCTGCGGCCAGGATAATCTACTTTCCACTGCTGGCTCCTTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | ACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTaGAAAGTAGATTATCCTGGCCGCAGCCACAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TALTEDSGRSQQ*KVDYPGRSHSL Trigger: TAGACTGTGGCTGCGGCCAGGATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCCAATATGAGAGAGCTTaGGCAAATGATCTGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: WACHLKVKFQLTFAIKGAQYERA*ANDLYP Trigger: GGGATACAGATCATTTGCCAAAGCTCTCTCATATTG...GGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR CCA 72 bp | GAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTaGAAGGAGCCAGCAGTGGAAAGTAGATTATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ERPRVHCTDRRF*KEPAVESRLSW Trigger: CCAGGATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR TCA 72 bp | GCACAAAATGCCCCTGTTACTGAGGTAGTGACACTTTaGGATGCTCCAACAACTCCTAAACCCTGCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQNAPVTEVVTL*DAPTTPKPCLV Trigger: GACAAGGCAGGGTTTAGGAGTTGTTGGAGCATCTCAAAGTGTCACTACCTCAGTAACAGGGGCATTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGACTCAATATGAGAGAGCTTaGGCAAATGATCTGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: VKFQLTFAIKGATNLGRTQYERA*ANDLYP Trigger: GGGATACAGATCATTTGCCAAAGCTCTCTCATATTG...AGTCCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR TCA 72 bp | TACTTCCATTTTGGAAGGATCCTGCACATAGACAGGTaGTACCAAAGAAGCTCCAACCGTCAGTCCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YFHFGRILHIDR*YQRSSNRQSTQ Trigger: TTGAGTGGACTGACGGTTGGAGCTTCTTTGGTATCACCTGTCTATGTGCAGGATCCTTCCAAAATGGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR GCA 72 bp | AGAAGCGTAGCTGTGTGCATCTTAAAAACAGGGTGCTaGGTAGTTTACTTCCATTTTGGAAGGATCCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RSVAVCILKTGC*VVYFHFGRILH Trigger: GTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAAGATGCACACAGCTACGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR GCA 72 bp | TGCAGAAGCGTAGCTGTGTGCATCTTAAAAACAGGGTaGTGCGTAGTTTACTTCCATTTTGGAAGGATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRSVAVCILKTG*CVVYFHFGRIL Trigger: CAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAAGATGCACACAGCTACGCTTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | CTTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTaGAAGGATCCTGCACATAGACAGGTGATACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKNRVLRSLLPF*KDPAHRQVIPK Trigger: CTTTGGTATCACCTGTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CCA 72 bp | TATTCTAAAGCTTCGAATCACCAAGTTGTGCGTGTGTaGGTGGAGTTTTATTCCTACCATAGAGTAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YSKASNHQVVRV*VEFYSYHRVGV Trigger: CACACCTACTCTATGGTAGGAATAAAACTCCACCCACACACGCACAACTTGGTGATTCGAAGCTTTAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR TCA 72 bp | AACTGTCGCTACACTATTGCGATGTGTGGTCGTGGATaGAGAAAACAGATAGCTGTGTTTGATCAAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: NCRYTIAMCGRG*RKQIAVFDQNT Trigger: AGTGTTTTGATCAAACACAGCTATCTGTTTTCTTCATCCACGACCACACATCGCAATAGTGTAGCGACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| 3UTR GCA 72 bp | ACTAAGCATATTCTAAAGCTTCGAATCACCAAGTTGTaGGTGTGTGGGTGGAGTTTTATTCCTACCATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TKHILKLRITKL*VCGWSFIPTIE Trigger: CTCTATGGTAGGAATAAAACTCCACCCACACACGCACAACTTGGTGATTCGAAGCTTTAGAATATGCTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR CCA 72 bp | TTACGATGGCTCAAATCTAGCTTTAATCATGTCTCCTaGAAGATCCTAAAACAGTCCTATGCTTTGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRWLKSSFNHVS*KILKQSYALCL Trigger: GAGGCACAAAGCATAGGACTGTTTTAGGATCTTCCAGGAGACATGATTAAAGCTAGATTTGAGCCATCGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCGTGGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGACCTCGAGGACGGTCTaGAGGTCGTCACTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSWVSAGAAWEGGCVQTQTSRTV*RSSLGL Trigger: CAGGCCCAGTGACGACCTCCAGACCGTCCTCGAGGT...CTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCGTGGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGAACGTGCATCCTGAGTaGGCTGGGCTGCCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSWVSAGAAWEGGCVQTQNVHPE*AGLPGG Trigger: TCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTT...CTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | GGCGGGAAGGGGCATTCCACGCCAGTGAGCCGGCTGCACAGCATGACAGGGACAGGGAGCCGTCCCCCATaGCTTGTGGTCTGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGKGHSTPVSRLHSMTGTGSRPP*LVVCAN Trigger: ATTTGCACAGACCACAAGGCATGGGGGACGGCTCCC...TGTCCCTGTCATGCTGTGCAGCCGGCTCACTGGCGTGGAATGCCCCTTCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGAGCTGGGCTGCCAGGTaGAGCTGTCGCCTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWLVHGWRGHFYGPLALRSWAAR*SCRLRC Trigger: GCACCGCAGGCGACAGCTCCACCTGGCAGCCCAGCT...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGAAGGGGCATTCCACGCCAGTGAGCCGGCTGCACAGCATGACAGGGACAGTCCCCCATGCCTTGTaGTCTGTGCAAATTCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGKGHSTPVSRLHSMTGTVPHAL*SVQIRP Trigger: CGGCCGAATTTGCACAGACCACAAGGCATGGGGGAC...TGTCCCTGTCATGCTGTGCAGCCGGCTCACTGGCGTGGAATGCCCCTTCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAGGCTGGCTGTGAGCCTTGCCAGCAGCCCGGTCCCCCGTGTAAAGAGTAGCCAGCAGCAGCCTTaGCTCTTCGTCCGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLAVSLASSPVPRVKSSQQQP*LFVRRL Trigger: GAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCT...ACTCTTTACACGGGGGACCGGGCTGCTGGCAAGGCTCACAGCCAGCCTAAGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGACGCCTGGTTTCTGGTTGCTaGGAGACCCGGAGGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQPCCRALPQWWKVRAGRLVSGC*ETRRTV Trigger: CACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAG...GCGTCCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAACCTCGAGGACGGTCTaGAGGTCGTCACTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVQLGREAASKHSIATSRTV*RSSLGL Trigger: CAGGCCCAGTGACGACCTCCAGACCGTCCTCGAGGT...TGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TGCTATACGAACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCACCTCGAGGACGGTCTaGAGGTCGTCACTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CYTNKALGVLADLGSRGTTSRTV*RSSLGL Trigger: CAGGCCCAGTGACGACCTCCAGACCGTCCTCGAGGT...GGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CAA 72 bp | CGTTGGAGGCTTCAGGTTGCCCAACGTTCGTTCTCTTaGCTCAAAGACCTGGGGCCCCTCGGCCTGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWRLQVAQRSFS*LKDLGPLGLVR Trigger: CCGCACCAGGCCGAGGGGCCCCAGGTCTTTGAGCAAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGGACCCTCGTGGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCTCTAAGGCACAGACCTaGGTTCTGGAGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRDPRGSLLVQLGREAASSKAQT*VLESSW Trigger: CCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAGA...GGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCCACGAGGGTCCCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TGCTATACGAACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCCTGGTTTCTGGTTGCTaGGAGACCCGGAGGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYTNKALGVLADLGSRGTLVSGC*ETRRTV Trigger: CACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAG...GGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CAA 72 bp | TGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATaGCAAGAAATGCCAGCGCCAGTGCCGTGGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CSLGGRLRPNTA*QEMPAPVPWSL Trigger: TAGGGACCACGGCACTGGCGCTGGCATTTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CAA 72 bp | AGATCTAGGCAGGCTAGGAAGCCAGCGGCAGCCATGTaGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRQARKPAAAM*QGSATMVEGQS Trigger: GCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCGCTGGCTTCCTAGCCTGCCTAGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGCGCCAGTGCCGTGGTCCCTAAGCCCCCACTTGTTTACTAGACGGGAAGGGAGCCGTCCCCCATaGCTTGTGGTCTGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPAPVPWSLSPHLFTRREGSRPP*LVVCAN Trigger: ATTTGCACAGACCACAAGGCATGGGGGACGGCTCCC...TTCCCGTCTAGTAAACAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGGCCAGTTGCATGGGCCTGCCACCTCAAAGTCAAGTTCCAGCTGACCTTTGCCTCCCCCTCCTCCTaGGAGATGCCCAACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RWPVAWACHLKVKFQLTFASPSS*EMPNTD Trigger: ATCCGTGTTGGGCATCTCGCAGGAGGAGGGGGAGGC...AAAGGTCAGCTGGAACTTGACTTTGAGGTGGCAGGCCCATGCAACTGGCCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGGCCTCCCCCTCCTCCTaGGAGATGCCCAACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMDVELPHGCRRECGATTASPSS*EMPNTD Trigger: ATCCGTGTTGGGCATCTCGCAGGAGGAGGGGGAGGC...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGAAATGTCCTAGTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGCTGGGCTGCCAGGTaGAGCTGTCGCCTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNVLVQSDLCDVGGVWGSWAAR*SCRLRC Trigger: GCACCGCAGGCGACAGCTCCACCTGGCAGCCCAGCT...ACCCCAGACACCTCCCACATCACACAGATCACTCTGGACTAGGACATTTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAACTGGTTTCTGGTTGCTaGGAGACCCGGAGGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCWCSLGGRLRPNTALQELVSGC*ETRRTV Trigger: CACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAG...TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCATCAGCTGCAGGGAACTaGTCTTGCTGGCCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVQLGREAASKHSIASAAGN*SCWPQC Trigger: ACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGA...TGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TGCTATACGAACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCTCAGCTGCAGGGAACTaGTCTTGCTGGCCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYTNKALGVLADLGSRGTSAAGN*SCWPQC Trigger: ACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGA...GGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAGGAGTCTTCCTGGCTTaGATCCTCTTGGTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVQLGREAASKHSIAGVFLA*ILLVKG Trigger: GCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCC...TGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | TGCTATACGAACAAGGCCCTAGGGGTCTTGGCTGACCTGGGCTCTCGTGGCACCGGAGTCTTCCTGGCTTaGATCCTCTTGGTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYTNKALGVLADLGSRGTGVFLA*ILLVKG Trigger: GCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCC...GGTGCCACGAGAGCCCAGGTCAGCCAAGACCCCTAGGGCCTTGTTCGTATAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGCTGAGTGAGCTGGGCTaGCAGGTGGAGCTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLLSELG*QVELSP Trigger: AGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAG...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCTGAGTGAGCTGGGCTaGCAGGTGGAGCTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSAQKVSVFLTPNGDLALSELG*QVELSP Trigger: AGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGTCAGCTGCAGGGAACTaGTCTTGCTGGCCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLVHGWRGHFYGPLALRSAAGN*SCWPQC Trigger: ACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGA...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGCCAGCAGCAGCCTTaGCTCTTCGTCCGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLSQQQP*LFVRRL Trigger: GAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCT...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR TCA 90 bp | GTTCCTGACTCCAAATGGGGATTTGGCCGTCAAGGGACACAGATGACTTGTGGGAACGTGCATCCTGAGTaGGCTGGGCTGCCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPDSKWGFGRQGTQMTCGNVHPE*AGLPGG Trigger: TCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTT...CCCACAAGTCATCTGTGTCCCTTGACGGCCAAATCCCCATTTGGAGTCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGGGAGTCTTCCTGGCTTaGATCCTCTTGGTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PWLVHGWRGHFYGPLALRGVFLA*ILLVKG Trigger: GCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCC...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCTCCTGGTTTCTGGTTaGTGGGAGACCCGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GQSAQKVSVFLTPNGDLALLVSG*WETRRT Trigger: GGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCCTCCCCCTCCTCCTaGGAGATGCCCAACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFERPRVHCTDRRFWKEPASPSS*EMPNTD Trigger: ATCCGTGTTGGGCATCTCGCAGGAGGAGGGGGAGGC...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGGTCCCCCATGCCTTGTaGTCTGTGCAAATTCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GMDVELPHGCRRECGATTVPHAL*SVQIRP Trigger: CGGCCGAATTTGCACAGACCACAAGGCATGGGGGAC...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACACGGCTCCTCGATGTTaGAGGCCCTGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRDGCRTSSWLPERMWGYTAPRC*RPWRSS Trigger: AGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGT...GTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGACGGCTCCTCGATGTTaGAGGCCCTGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLTAPRC*RPWRSS Trigger: AGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGT...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAAGCCAGCAGCAGCCTTaGCTCTTCGTCCGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFERPRVHCTDRRFWKEPSQQQP*LFVRRL Trigger: GAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCT...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCAGGATGCCGCATTCCTaGAGGGACTTGGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFRMPHS*RDLVRS Trigger: CGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCT...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGAGGATGCCGCATTCCTaGAGGGACTTGGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GMDVELPHGCRRECGATTRMPHS*RDLVRS Trigger: CGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCT...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CAA 72 bp | ATGCCAGCGCCAGTGCCGTGGTCCCTAAGCCCCCACTaGTTTACTAGACGGGAATCCTCTCTGGGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MPAPVPWSLSPH*FTRRESSLGRV Trigger: AACTCTTCCCAGAGAGGATTCCCGTCTAGTAAACAAGTGGGGGCTTAGGGACCACGGCACTGGCGCTGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTCACCAAGGCATAGTGTGCTAGAAGGAACACCCATAACTGCTGGTGGTAACGTGCATCCTGAGTaGGCTGGGCTGCCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRHSVLEGTPITAGGNVHPE*AGLPGG Trigger: TCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTT...ACCACCAGCAGTTATGGGTGTTCCTTCTAGCACACTATGCCTTGGTGACAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCACCAAGGCATAGTGTGCTAGAAGGAACACCCATAACTGCTGGTGGTCTCCTGGTTTCTGGTTaGTGGGAGACCCGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRHSVLEGTPITAGGLLVSG*WETRRT Trigger: GGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAG...ACCACCAGCAGTTATGGGTGTTCCTTCTAGCACACTATGCCTTGGTGACAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCACTCCTGGTTTCTGGTTaGTGGGAGACCCGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GFERPRVHCTDRRFWKEPLLVSG*WETRRT Trigger: GGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAG...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCACTGGTTTCTGGTTGCTaGGAGACCCGGAGGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFERPRVHCTDRRFWKEPLVSGC*ETRRTV Trigger: CACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAG...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTACAGAGTGCTTGCCAAAAGTCCGTCCTGCTTCCATTGCCTGGGCCTCCACGATGTTGGAGGCCCTaGAGGAGCTCTGTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALQSACQKSVLLPLPGPPRCWRP*RSSVFW Trigger: CCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCG...TGGAGGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAACGGCTCCTCGATGTTaGAGGCCCTGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFERPRVHCTDRRFWKEPTAPRC*RPWRSS Trigger: AGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGT...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGACCTCGAGGACGGTCTaGAGGTCGTCACTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVKFQLTFAIKGATNLGRTSRTV*RSSLGL Trigger: CAGGCCCAGTGACGACCTCCAGACCGTCCTCGAGGT...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR CAA 72 bp | ACCTGGGCTCTCGTGGCACCTGAAACCAAGGTTGCGTaGGAGGCTTCAGGTTGCCCAACGTTCGTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TWALVAPETKVA*EASGCPTFVLF Trigger: AAAGAGAACGAACGTTGGGCAACCTGAAGCCTCCAACGCAACCTTGGTTTCAGGTGCCACGAGAGCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGGGAGTCTTCCTGGCTTaGATCCTCTTGGTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMDVELPHGCRRECGATTGVFLA*ILLVKG Trigger: GCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCC...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACTTGGGCCTGATAACGTaGATCCTGAGTGAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRDGCRTSSWLPERMWGYLGLIT*ILSELG Trigger: GCCCAGCTCACTCAGGATGCACGTTATCAGGCCCAA...GTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGTCACCAAGGCATAGTGTGCTAGAAGGAACACCCATAACTGCTGGTGGTGGGAGCCGTCCCCCATaGCTTGTGGTCTGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRHSVLEGTPITAGGGSRPP*LVVCAN Trigger: ATTTGCACAGACCACAAGGCATGGGGGACGGCTCCC...ACCACCAGCAGTTATGGGTGTTCCTTCTAGCACACTATGCCTTGGTGACAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| CDS-3UTR GCA 90 bp | CATGTGGTACTCAGGCTCCAAGGGGGACAAAGTGCCCAGAAGGTCTCAGTGTTCTCTAAGGCACAGACCTaGGTTCTGGAGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVVLRLQGGQSAQKVSVFSKAQT*VLESSW Trigger: CCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAGA...GAACACTGAGACCTTCTGGGCACTTTGTCCCCCTTGGAGCCTGAGTACCACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| CDS-3UTR GCA 90 bp | GTGGGGCTACAACGTAGTTTTCTAGAGAGGTCTCTTCCTGTGTGTGGATTCATCGCCTCCCCCTCCTCCTaGGAGATGCCCAACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGLQRSFLERSLPVCGFIASPSS*EMPNTD Trigger: ATCCGTGTTGGGCATCTCGCAGGAGGAGGGGGAGGC...GATGAATCCACACACAGGAAGAGACCTCTCTAGAAAACTACGTTGTAGCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS-3UTR CCA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCGATGTTGGAGGCCCTaGAGGAGCTCTGTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSAQKVSVFLTPNGDLARCWRP*RSSVFW Trigger: CCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| CDS-3UTR CCA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCAGGATGCCGCATTCCTaGAGGGACTTGGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVRMPHS*RDLVRS Trigger: CGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCT...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
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| 3UTR CAA 72 bp | GAGAAGGCCACTCATGCTTACAGCTTTACAGAGTGCTaGCCAAAAGTCCGTCCTGCTTCCATTGCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKATHAYSFTEC*PKVRPASIAWA Trigger: GGCCCAGGCAATGGAAGCAGGACGGACTTTTGGCAAGCACTCTGTAAAGCTGTAAGCATGAGTGGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGCTAAGCTCCTCCTGTTaGTGGATGGGAGGACCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVKFQLTFAIKGATNLGRLSSSC*WMGGPG Trigger: ACCCGGTCCTCCCATCCATCAACAGGAGGAGCTTAG...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGTCAACTAAGCATTTCCTAAGTCTGCCATCTCCTCCAAGCAGAGAAAATAGCTGGGCTGCCAGGTaGAGCTGTCGCCTGCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSTKHFLSLPSPPSRENSWAAR*SCRLRC Trigger: GCACCGCAGGCGACAGCTCCACCTGGCAGCCCAGCT...ATTTTCTCTGCTTGGAGGAGATGGCAGACTTAGGAAATGCTTAGTTGACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAATGTCCTAGTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTTCTAAGGCACAGACCTaGGTTCTGGAGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNVLVQSDLCDVGGVWGSKAQT*VLESSW Trigger: CCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAGA...ACCCCAGACACCTCCCACATCACACAGATCACTCTGGACTAGGACATTTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGTCAGCTGCAGGGAACTaGTCTTGCTGGCCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVKFQLTFAIKGATNLGRSAAGN*SCWPQC Trigger: ACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGA...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACAACGTGCATCCTGAGTaGGCTGGGCTGCCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTGCCVVYFHFGRILHIDNVHPE*AGLPGG Trigger: TCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTT...GTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGCTGAGTGAGCTGGGCTaGCAGGTGGAGCTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALANDLYPQKNKTLQCLLSELG*QVELSP Trigger: AGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAG...CAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | TTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATCTCCTGGTTTCTGGTTaGTGGGAGACCCGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FTALTEDSGRSQQWKVDYLLVSG*WETRRT Trigger: GGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAG...ATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCTACAACGTAGTTTTCTAGAGAGGTCTCTTCCTGTGTGTGGATTCATCCGATGTTGGAGGCCCTaGAGGAGCTCTGTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLQRSFLERSLPVCGFIRCWRP*RSSVFW Trigger: CCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCG...GATGAATCCACACACAGGAAGAGACCTCTCTAGAAAACTACGTTGTAGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATACGGCTCCTCGATGTTaGAGGCCCTGGAGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTALTEDSGRSQQWKVDYTAPRC*RPWRSS Trigger: AGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGT...ATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGAGCCAGCAGCAGCCTTaGCTCTTCGTCCGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RALANDLYPQKNKTLQCLSQQQP*LFVRRL Trigger: GAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCT...CAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATACTGAGTGAGCTGGGCTaGCAGGTGGAGCTGTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTGCCVVYFHFGRILHILSELG*QVELSP Trigger: AGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAG...TATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACGGGAGCCGTCCCCCATaGCTTGTGGTCTGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGCCVVYFHFGRILHIDGSRPP*LVVCAN Trigger: ATTTGCACAGACCACAAGGCATGGGGGACGGCTCCC...GTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCTACAACGTAGTTTTCTAGAGAGGTCTCTTCCTGTGTGTGGATTCATCTCTAAGGCACAGACCTaGGTTCTGGAGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLQRSFLERSLPVCGFISKAQT*VLESSW Trigger: CCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAGA...GATGAATCCACACACAGGAAGAGACCTCTCTAGAAAACTACGTTGTAGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| 3UTR CAA 72 bp | AGCTCTAAGGTGTTTCAGAGATGTGTGCTGAGGGATTaGCGACAGCAGAAGATAGCTCTTCCCTTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKVFQRCVLRD*RQQKIALPFAA Trigger: GGCAGCAAAGGGAAGAGCTATCTTCTGCTGTCGCAAATCCCTCAGCACACATCTCTGAAACACCTTAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACAGGATGCCGCATTCCTaGAGGGACTTGGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LWQMICIPRKTRLYSACDRMPHS*RDLVRS Trigger: CGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCT...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| 3UTR CAA 72 bp | CACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTaGAGAGAGACGCTGAGGCTGGGAGATAAAATAATT | + |
|
Preference number: 4 (lower is better) Translates to: HFGVTGLPHLTR*RETLRLGDKII Trigger: AATTATTTTATCTCCCAGCCTCAGCGTCTCTCTCAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS TCA 90 bp | CTTCCGGCCCTTGGCAGACTTGGGCCTGATAACGTGCATCCTGAGTaGGCTGGGCTGCCAGGTGGAGCTGTCGCCTGCGGTGCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPALGRLGPDNVHPE*AGLPGGAVACGADH Trigger: GTGGTCAGCACCGCAGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTTATCAGGCCCAAGTCTGCCAAGGGCCGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCGGCAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGGGCCGCTTCCGGCCCTaGGCAGACTTGGGCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PAAAMLQGSATMVEGQSWGRFRP*ADLGLI Trigger: TATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCC...CCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS GCA 90 bp | AAATTCGGCCGCTTCCGGCCCTTGGCAGACTTGGGCCTGATAACGTaGATCCTGAGTGAGCTGGGCTGCCAGGTGGAGCTGTCGCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KFGRFRPLADLGLIT*ILSELGCQVELSPA Trigger: CGCAGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTTATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCCGAATTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS GCA 90 bp | GTGGTGGAGGTGAAGAGGATAGTGCACTGGGGGAGCCGTCCCCCATaGCTTGTGGTCTGTGCAAATTCGGCCGCTTCCGGCCCTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVEVKRIVHWGSRPP*LVVCANSAASGPWQ Trigger: CTGCCAAGGGCCGGAAGCGGCCGAATTTGCACAGACCACAAGGCATGGGGGACGGCTCCCCCAGTGCACTATCCTCTTCACCTCCACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS TCA 90 bp | GCTCCTCCTGTTGATGGATGGGAGGACCGGGTACCTGTTGAGAGATaGGGCGGTCCGTGTCGGTGCCTGCTGCAGCAGCAACTCCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: APPVDGWEDRVPVER*GGPCRCLLQQQLRH Trigger: ATGCCGGAGTTGCTGCTGCAGCAGGCACCGACACGGACCGCCTCATCTCTCAACAGGTACCCGGTCCTCCCATCCATCAACAGGAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS GCA 90 bp | TTGGCAGACTTGGGCCTGATAACGTGCATCCTGAGTGAGCTGGGCTaGCAGGTGGAGCTGTCGCCTGCGGTGCTGACCACAGTGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LADLGLITCILSELG*QVELSPAVLTTVLR Trigger: ACGCAGCACTGTGGTCAGCACCGCAGGCGACAGCTCCACCTGGCAGCCCAGCTCACTCAGGATGCACGTTATCAGGCCCAAGTCTGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGCTGGTCCATGGCTGGAGAGGCCATTTCTATGGGCCTCTAGCTCTAAGGGGCCGCTTCCGGCCCTaGGCAGACTTGGGCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PWLVHGWRGHFYGPLALRGRFRP*ADLGLI Trigger: TATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCC...CCTTAGAGCTAGAGGCCCATAGAAATGGCCTCTCCAGCCATGGACCAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS TCA 90 bp | GGCCACGCCTCCCCCTCCTCCTGCGAGATGCCCAACACGGATTTATaGAGGATGCCGCATTCCTGGAGGGACTTGGTGAGGTCGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHASPSSCEMPNTDL*RMPHSWRDLVRSEN Trigger: GTTCTCCGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCTTCATAAATCCGTGTTGGGCATCTCGCAGGAGGAGGGGGAGGCGTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS CCA 90 bp | AATCCTCTTGGTAAAGGGCCTGGACGCTGCTCAGCTGCAGGGAACTaGTCTTGCTGGCCACAGTGTCCACGGCTCCCACCTCTAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPLGKGPGRCSAAGN*SCWPQCPRLPPLSS Trigger: GGAGCTTAGAGGTGGGAGCCGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGAGCAGCGTCCAGGCCCTTTACCAAGAGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGACGCTGTTGCAGGGAACTGGTCTaGCTGGCCACAGTGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: QPCCRALPQWWKVRAGRCCRELV*LATVST Trigger: CGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCA...ACAGCGTCCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGCAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLQPAAA*ALRPTA Trigger: AGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTG...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS GCA 90 bp | TGGAGTCTTCCTGGCTTGAATCCTCTTGGTAAAGGGCCTGGACGCTaGTCAGCTGCAGGGAACTGGTCTTGCTGGCCACAGTGTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: WSLPGLNPLGKGPGR*SAAGNWSCWPQCPR Trigger: CCGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGAGCAGCGTCCAGGCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACGACGGCTCCTCGATGTaGGAGGCCCTGGAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRDGCRTSSWLPERMWGYDGSSM*EALEEL Trigger: GAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTC...GTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGACTGGCCGCTTCCGGCCCTaGGCAGACTTGGGCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VKFQLTFAIKGATNLGRTGRFRP*ADLGLI Trigger: TATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCC...AGTCCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | CCTGACACCAGAGCCCACTTTGGGGTCACTGGCCTTCCACATTTGACAAGGTTGTGCAGGGAACTGGTCTaGCTGGCCACAGTGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PDTRAHFGVTGLPHLTRLCRELV*LATVST Trigger: CGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCA...CAACCTTGTCAAATGTGGAAGGCCAGTGACCCCAAAGTGGGCTCTGGTGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS CCA 90 bp | GTCTCCTGGGCACTTCCATCGTCTCAATGCTGCAGTGTTGGTAGGTaGCTTTGTTTTTCTGCTCGGCCACCTCGAGGACGGTCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSWALPSSQCCSVGR*LCFSARPPRGRSGG Trigger: ACCTCCAGACCGTCCTCGAGGTGGCCGAGCAGAAAAACAAAGCCACCTACCAACACTGCAGCATTGAGACGATGGAAGTGCCCAGGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCGCCGTCCCCCATGCCTaGTGGTCTGTGCAAATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQSAQKVSVFLTPNGDLAAVPHA*WSVQIR Trigger: CCGAATTTGCACAGACCACAAGGCATGGGGGACGGC...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGGGTAGGATGACACTGTTGAGAGTCATCACTGCTGTCACCAAGGCAGCCGTCCCCCATGCCTaGTGGTCTGTGCAAATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVWGRMTLLRVITAVTKAAVPHA*WSVQIR Trigger: CCGAATTTGCACAGACCACAAGGCATGGGGGACGGC...TGCCTTGGTGACAGCAGTGATGACTCTCAACAGTGTCATCCTACCCCAGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTCAAGTTCCAGCTGACCTTTGCCATCAAAGGAGCCACTAACCTAGGCAGGGACGGCTCCTCGATGTaGGAGGCCCTGGAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVKFQLTFAIKGATNLGRDGSSM*EALEEL Trigger: GAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTC...CCTGCCTAGGTTAGTGGCTCCTTTGATGGCAAAGGTCAGCTGGAACTTGACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS TCA 90 bp | CCAACACGGATTTATGAAGGATGCCGCATTCCTGGAGGGACTTGGTaGGGTCGGAGAACCGTCTCCTGGGCACTTCCATCGTCTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PTRIYEGCRIPGGTW*GRRTVSWALPSSQC Trigger: GCATTGAGACGATGGAAGTGCCCAGGAGACGGTTCTCCGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCTTCATAAATCCGTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | AGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGAGAGTCTGCAGGGAACTGGTCTaGCTGGCCACAGTGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SDLCDVGGVWGRMTLLRVCRELV*LATVST Trigger: CGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCA...GACTCTCAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGAGAGACCCAGAGTTCACTGCACTGACAGAAGATTCTGGAAGGAGCCATGCAGGGAACTGGTCTaGCTGGCCACAGTGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GFERPRVHCTDRRFWKEPCRELV*LATVST Trigger: CGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCA...TGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAACTCTGGGTCTCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCTACAACGTAGTTTTCTAGAGAGGTCTCTTCCTGTGTGTGGATTCATCGACGGCTCCTCGATGTaGGAGGCCCTGGAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLQRSFLERSLPVCGFIDGSSM*EALEEL Trigger: GAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTC...GATGAATCCACACACAGGAAGAGACCTCTCTAGAAAACTACGTTGTAGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCGGCAGCCATGTTGCAGGGCTCTGCCACAATGGTGGAAGGTCAGAGCTGGCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PAAAMLQGSATMVEGQSWLNAAV*VGGFVF Trigger: AAAAACAAAGCCACCTACCAACACTGCAGCATTGAG...CCAGCTCTGACCTTCCACCATTGTGGCAGAGCCCTGCAACATGGCTGCCGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTGGTGCAGCTTGGGAGGGAGGCTGCGTCCAAACACAGCATTGCAAGAATGGAGTCTTCCTGGCTaGAATCCTCTTGGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCWCSLGGRLRPNTALQEWSLPG*NPLGKG Trigger: CCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCA...TTCTTGCAATGCTGTGTTTGGACGCAGCCTCCCTCCCAAGCTGCACCAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | GGGATGGATGTAGAACTTCCTCATGGCTGCCGGAGAGAATGTGGGGCTACAACGTGGAGTCTTCCTGGCTaGAATCCTCTTGGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GMDVELPHGCRRECGATTWSLPG*NPLGKG Trigger: CCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCA...CGTTGTAGCCCCACATTCTCTCCGGCAGCCATGAGGAAGTTCTACATCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATAGACCAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTGCCVVYFHFGRILHIDQPAAA*ALRPTA Trigger: AGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTG...GTCTATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACGACGGCTCCTCGATGTaGGAGGCCCTGGAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWQMICIPRKTRLYSACDDGSSM*EALEEL Trigger: GAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTC...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCAAATGATCTGTATCCCCAGAAAAACAAGACTCTACAGTGCTTGTGACCAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWQMICIPRKTRLYSACDQPAAA*ALRPTA Trigger: AGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTG...GTCACAAGCACTGTAGAGTCTTGTTTTTCTGGGGATACAGATCATTTGCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCAACTAAGCATTTCCTAAGTCTGCCATCTCCTCCAAGCAGAGAAAATCAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NQSTKHFLSLPSPPSRENQPAAA*ALRPTA Trigger: AGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTG...ATTTTCTCTGCTTGGAGGAGATGGCAGACTTAGGAAATGCTTAGTTGACTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAGAGTGATCTGTGTGATGTGGGAGGTGTCTGGGGTAGGATGACACTGTTGCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VQSDLCDVGGVWGRMTLLLNAAV*VGGFVF Trigger: AAAAACAAAGCCACCTACCAACACTGCAGCATTGAG...CAACAGTGTCATCCTACCCCAGACACCTCCCACATCACACAGATCACTCTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCTGACTCCAAATGGGGATTTGGCCGTCAAGGGACACAGATGACTTGTGGGCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPDSKWGFGRQGTQMTCGLNAAV*VGGFVF Trigger: AAAAACAAAGCCACCTACCAACACTGCAGCATTGAG...CCCACAAGTCATCTGTGTCCCTTGACGGCCAAATCCCCATTTGGAGTCAGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | GGACAAAGTGCCCAGAAGGTCTCAGTGTTCCTGACTCCAAATGGGGATTTGGCCCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQSAQKVSVFLTPNGDLALNAAV*VGGFVF Trigger: AAAAACAAAGCCACCTACCAACACTGCAGCATTGAG...GGCCAAATCCCCATTTGGAGTCAGGAACACTGAGACCTTCTGGGCACTTTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 |
||
| CDS-3UTR CAA 90 bp | TTCACTGCACTGACAGAAGATTCTGGAAGGAGCCAGCAGTGGAAAGTAGATTATTGGAGTCTTCCTGGCTaGAATCCTCTTGGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTALTEDSGRSQQWKVDYWSLPG*NPLGKG Trigger: CCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCA...ATAATCTACTTTCCACTGCTGGCTCCTTCCAGAATCTTCTGTCAGTGCAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAACAGGGTGCTGCGTAGTTTACTTCCATTTTGGAAGGATCCTGCACATATGGAGTCTTCCTGGCTaGAATCCTCTTGGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKTGCCVVYFHFGRILHIWSLPG*NPLGKG Trigger: CCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCA...TATGTGCAGGATCCTTCCAAAATGGAAGTAAACTACGCAGCACCCTGTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS CAA 90 bp | GCACGAACCTTTGGCCTGAGGGTGACCGGACAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCTCCTCGATGTTGGAGGCCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARTFGLRVTGQPAAA*ALRPTAPRCWRPWR Trigger: CCTCCAGGGCCTCCAACATCGAGGAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTGTCCGGTCACCCTCAGGCCAAAGGTTCGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS GCA 72 bp | GGGCCTGGACGCTGCTCAGCTGCAGGGAACTGGTCTTaGTGGCCACAGTGTCCACGGCTCCCACCTCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPGRCSAAGNWS*WPQCPRLPPLS Trigger: GCTTAGAGGTGGGAGCCGTGGACACTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGAGCAGCGTCCAGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS CCA 72 bp | CGGAGGACCGTGGTGGAGGTGAAGAGGATAGTGCACTaGGGGAGCCGTCCCCCATGCCTTGTGGTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRTVVEVKRIVH*GSRPPCLVVCA Trigger: TGCACAGACCACAAGGCATGGGGGACGGCTCCCCCAGTGCACTATCCTCTTCACCTCCACCACGGTCCTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS CAA 72 bp | TTTGGCCTGAGGGTGACCGGACAGCCAGCAGCAGCCTaGGCTCTTCGTCCGACGGCTCCTCGATGTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FGLRVTGQPAAA*ALRPTAPRCWR Trigger: CCTCCAACATCGAGGAGCCGTCGGACGAAGAGCCAAGGCTGCTGCTGGCTGTCCGGTCACCCTCAGGCCAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS TCA 72 bp | CCACCTCGAGGACGGTCTGGAGGTCGTCACTGGGCCTaGAATAGCGCACGAACCTTTGGCCTGAGGGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: PPRGRSGGRHWA*NSARTFGLRVT Trigger: GGTCACCCTCAGGCCAAAGGTTCGTGCGCTATTTCAGGCCCAGTGACGACCTCCAGACCGTCCTCGAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
||
| CDS CAA 72 bp | CTCCTCCTGTTGATGGATGGGAGGACCGGGTACCTGTaGAGAGATGAGGCGGTCCGTGTCGGTGCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLLLMDGRTGYL*RDEAVRVGACC Trigger: GCAGCAGGCACCGACACGGACCGCCTCATCTCTCAACAGGTACCCGGTCCTCCCATCCATCAACAGGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 90 bp | TCCCCCATGCCTTGTGGTCTGTGCAAATTCGGCCGCTTCCGGCCCTaGGCAGACTTGGGCCTGATAACGTGCATCCTGAGTGAGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPMPCGLCKFGRFRP*ADLGLITCILSELG Trigger: GCCCAGCTCACTCAGGATGCACGTTATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCCGAATTTGCACAGACCACAAGGCATGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | AGCAGCCTTGGCTCTTCGTCCGACGGCTCCTCGATGTaGGAGGCCCTGGAGGAGCTCTGTCTTTTGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSLGSSSDGSSM*EALEELCLLVR Trigger: CCGAACCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTCGGACGAAGAGCCAAGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 90 bp | ACCTCTAAGCTCCTCCTGTTGATGGATGGGAGGACCGGGTACCTGTaGAGAGATGAGGCGGTCCGTGTCGGTGCCTGCTGCAGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TSKLLLLMDGRTGYL*RDEAVRVGACCSSN Trigger: GTTGCTGCTGCAGCAGGCACCGACACGGACCGCCTCATCTCTCAACAGGTACCCGGTCCTCCCATCCATCAACAGGAGGAGCTTAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS GCA 72 bp | CCTGGCTTGAATCCTCTTGGTAAAGGGCCTGGACGCTaGTCAGCTGCAGGGAACTGGTCTTGCTGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: PGLNPLGKGPGR*SAAGNWSCWPQ Trigger: CTGTGGCCAGCAAGACCAGTTCCCTGCAGCTGAGCAGCGTCCAGGCCCTTTACCAAGAGGATTCAAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CCA 72 bp | TTGAGACCGTTGCACAGACTCCTGGTTTCTGGTTGCTaGGAGACCCGGAGGACCGTGGTGGAGGTGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRPLHRLLVSGC*ETRRTVVEVKR Trigger: CCTCTTCACCTCCACCACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAGTCTGTGCAACGGTCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 90 bp | GCTGCAGCAGCAACTCCGGCATCTCGTCAGGAGCTCCCTGAGATGTaGAGACCGTTGCACAGACTCCTGGTTTCTGGTTGCTGGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: AAAATPASRQELPEM*RPLHRLLVSGCWET Trigger: GGTCTCCCAGCAACCAGAAACCAGGAGTCTGTGCAACGGTCTCAACATCTCAGGGAGCTCCTGACGAGATGCCGGAGTTGCTGCTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS GCA 72 bp | ATGTTGAGACCGTTGCACAGACTCCTGGTTTCTGGTTaGTGGGAGACCCGGAGGACCGTGGTGGAGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: MLRPLHRLLVSG*WETRRTVVEVK Trigger: CTTCACCTCCACCACGGTCCTCCGGGTCTCCCAGCAACCAGAAACCAGGAGTCTGTGCAACGGTCTCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | CCTTGTGGTCTGTGCAAATTCGGCCGCTTCCGGCCCTaGGCAGACTTGGGCCTGATAACGTGCATCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PCGLCKFGRFRP*ADLGLITCILS Trigger: ACTCAGGATGCACGTTATCAGGCCCAAGTCTGCCAAGGGCCGGAAGCGGCCGAATTTGCACAGACCACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 90 bp | GGAGAACCGTCTCCTGGGCACTTCCATCGTCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTTCTGCTCGGCCACCTCGAGGACGGT | + |
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Preference number: 6 (lower is better) Translates to: GEPSPGHFHRLNAAV*VGGFVFLLGHLEDG Trigger: ACCGTCCTCGAGGTGGCCGAGCAGAAAAACAAAGCCACCTACCAACACTGCAGCATTGAGACGATGGAAGTGCCCAGGAGACGGTTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | GCAACTCCGGCATCTCGTCAGGAGCTCCCTGAGATGTaGAGACCGTTGCACAGACTCCTGGTTTCTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ATPASRQELPEM*RPLHRLLVSGC Trigger: GCAACCAGAAACCAGGAGTCTGTGCAACGGTCTCAACATCTCAGGGAGCTCCTGACGAGATGCCGGAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS TCA 72 bp | ATTTATGAAGGATGCCGCATTCCTGGAGGGACTTGGTaGGGTCGGAGAACCGTCTCCTGGGCACTTCCATCG | + |
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Preference number: 6 (lower is better) Translates to: IYEGCRIPGGTW*GRRTVSWALPS Trigger: CGATGGAAGTGCCCAGGAGACGGTTCTCCGACCTCACCAAGTCCCTCCAGGAATGCGGCATCCTTCATAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | CTAAGGCACAGACCTGCGTTCTGGAGTCTTCCTGGCTaGAATCCTCTTGGTAAAGGGCCTGGACGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRHRPAFWSLPG*NPLGKGPGRCS Trigger: TGAGCAGCGTCCAGGCCCTTTACCAAGAGGATTCAAGCCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 90 bp | TCCGACGGCTCCTCGATGTTGGAGGCCCTGGAGGAGCTCTGTCTTTaGGTTCGGATGATGAACTTCTTCTCTAAGGCACAGACCTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: SDGSSMLEALEELCL*VRMMNFFSKAQTCV Trigger: AACGCAGGTCTGTGCCTTAGAGAAGAAGTTCATCATCCGAACCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCGAGGAGCCGTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | TCTCCTGGGCACTTCCATCGTCTCAATGCTGCAGTGTaGGTAGGTGGCTTTGTTTTTCTGCTCGGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SPGHFHRLNAAV*VGGFVFLLGHL Trigger: GAGGTGGCCGAGCAGAAAAACAAAGCCACCTACCAACACTGCAGCATTGAGACGATGGAAGTGCCCAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS GCA 72 bp | AGAACCGTCTCCTGGGCACTTCCATCGTCTCAATGCTaGAGTGTTGGTAGGTGGCTTTGTTTTTCTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RTVSWALPSSQC*SVGRWLCFSAR Trigger: CCGAGCAGAAAAACAAAGCCACCTACCAACACTGCAGCATTGAGACGATGGAAGTGCCCAGGAGACGGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS GCA 72 bp | CGGAGAACCGTCTCCTGGGCACTTCCATCGTCTCAATaGTGCAGTGTTGGTAGGTGGCTTTGTTTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RRTVSWALPSSQ*CSVGRWLCFSA Trigger: AGCAGAAAAACAAAGCCACCTACCAACACTGCAGCATTGAGACGATGGAAGTGCCCAGGAGACGGTTCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS CAA 72 bp | TCCTCGATGTTGGAGGCCCTGGAGGAGCTCTGTCTTTaGGTTCGGATGATGAACTTCTTCTCTAAGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SSMLEALEELCL*VRMMNFFSKAQ Trigger: CTGTGCCTTAGAGAAGAAGTTCATCATCCGAACCAAAAGACAGAGCTCCTCCAGGGCCTCCAACATCGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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| CDS GCA 72 bp | GTTCGGATGATGAACTTCTTCTCTAAGGCACAGACCTaGGTTCTGGAGTCTTCCTGGCTTGAATCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRMMNFFSKAQT*VLESSWLESSW Trigger: CCAAGAGGATTCAAGCCAGGAAGACTCCAGAACGCAGGTCTGTGCCTTAGAGAAGAAGTTCATCATCCGAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105809.2 ENSMUST00000105810.8 ENSMUST00000105811.9 ENSMUST00000146415.2 |
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