Pregenerated sensors for UBTFL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074502Ensembl transcript IDs: ENSMUST00000098973.3, ENSMUST00000164441.2, ENSMUST00000169398.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCACAAATTCCCTCTCCCATCCCTCCCTCCACCCAGCTTCTATaGTGGTGGTCCCCCACTCAGCCACTCCTGCCTCACTGCCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: SPQIPSPIPPSTQLL*WWSPTQPLLPHCPS Trigger: GCTAGGGCAGTGAGGCAGGAGTGGCTGAGTGGGGGACCACCATCATAGAAGCTGGGTGGAGGGAGGGATGGGAGAGGGAATTTGTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 90 bp | GTCAACATGATCAATTTTCATGTGAACTCAGAGACTGAGGCAGCATaGATGCACAGGACCTGCAATGGTCTGCACAGGCCCTCTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: VNMINFHVNSETEAA*MHRTCNGLHRPSAG Trigger: GCCTGCAGAGGGCCTGTGCAGACCATTGCAGGTCCTGTGCATGCATGCTGCCTCAGTCTCTGAGTTCACATGAAAATTGATCATGTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 90 bp | GTCCCTCAAGGTCAACATGATCAATTTTCATGTGAACTCAGAGACTaGGGCAGCATGCATGCACAGGACCTGCAATGGTCTGCACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: VPQGQHDQFSCELRD*GSMHAQDLQWSAQA Trigger: GGCCTGTGCAGACCATTGCAGGTCCTGTGCATGCATGCTGCCTCAGTCTCTGAGTTCACATGAAAATTGATCATGTTGACCTTGAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 90 bp | GAACATATAGCCTTCACAGGACCAAGGACAGGCATCCCCTTCCATTaGTGCCAGACAAGGCAATCCTATGCTTCATATGCAACTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: EHIAFTGPRTGIPFH*CQTRQSYASYATGA Trigger: GGCTCCAGTTGCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGGAAGGGGATGCCTGTCCTTGGTCCTGTGAAGGCTATATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 90 bp | GAGGTCCTGAGTTCAAATCCCAGCAACCGCATCCGTAATGAGATCTaGTGTGCTCTTCTGGTGCATCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: EVLSSNPSNRIRNEI*CALLVHLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGCACATCAGATCTCATTACGGATGCGGTTGCTGGGATTTGAACTCAGGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 90 bp | TCCTCTGTTTCTGTTAAGCACTGGATACACAAGCTATTGTTAATGTaGCTCAAGGATGGCATGGTCCAACTGAGGCTGGCAGCTGCTAGA | + |
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Preference number: 1 (lower is better) Translates to: SSVSVKHWIHKLLLM*LKDGMVQLRLAAAR Trigger: TCTAGCAGCTGCCAGCCTCAGTTGGACCATGCCATCCTTGAGTCACATTAACAATAGCTTGTGTATCCAGTGCTTAACAGAAACAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 90 bp | CTGCAGGCATGTTGTGACTTCCACTTTAGTGCTTTTAGGGAACTTTaGAGTGTGGTCATAGGTGGGTCTCTGATTCTTGTGCCATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LQACCDFHFSAFREL*SVVIGGSLILVPSL Trigger: AAGAGATGGCACAAGAATCAGAGACCCACCTATGACCACACTGCAAAGTTCCCTAAAAGCACTAAAGTGGAAGTCACAACATGCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 90 bp | TCATATGCAACTGGAGCCATTTGTCTCTCAGTGTGTATTCTTTGGTaGGGATCATCAGGAAATGTAATGCCACAACTGAGGTATGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: SYATGAICLSVCILW*GSSGNVMPQLRYVL Trigger: TAGCACATACCTCAGTTGTGGCATTACATTTCCTGATGATCCCCACCAAAGAATACACACTGAGAGACAAATGGCTCCAGTTGCATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 90 bp | CTATTGTCCTTTAGAAGCCTGTTTTCTAATGAGAAAAAGAGTGAGTaGATCTTGATGGAAGTGGATCTAGGTAGGAACTGGAAGAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: LLSFRSLFSNEKKSE*ILMEVDLGRNWKSR Trigger: TCTACTCTTCCAGTTCCTACCTAGATCCACTTCCATCAAGATCCACTCACTCTTTTTCTCATTAGAAAACAGGCTTCTAAAGGACAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACCAGTTCCCTATCTGTTaGGAATGTCCTGGGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QEPDAGSAMANSLLPKLYQFPIC*ECPGFC Trigger: GCAAAACCCAGGACATTCTCAACAGATAGGGAACTG...GTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTAGTCCTGGGTTTTGCTTaGATGGTTCTAAACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: CCSVGSLPKPRNRMQAVLVLGFA*MVLNSD Trigger: GTCACTGTTTAGAACCATCCAAGCAAAACCCAGGAC...TAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGTCCTGGGTTTTGCTTaGATGGTTCTAAACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: AVQLGLFLSPGTGCRQCYVLGFA*MVLNSD Trigger: GTCACTGTTTAGAACCATCCAAGCAAAACCCAGGAC...ATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATGTCCTGGGTTTTGCTTaGATGGTTCTAAACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PRNRMQAVLWQTPFSPNYVLGFA*MVLNSD Trigger: GTCACTGTTTAGAACCATCCAAGCAAAACCCAGGAC...ATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR CAA 90 bp | GGAACATATAGCCTTCACAGGACCAAGGACAGGCATCCCCTTCCATaGATGCCAGACAAGGCAATCCTATGCTTCATATGCAACTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GTYSLHRTKDRHPLP*MPDKAILCFICNWS Trigger: GCTCCAGTTGCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGGAAGGGGATGCCTGTCCTTGGTCCTGTGAAGGCTATATGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTGTTGAGAATGTCCTaGGTTTTGCTTGGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: PGTGCRQCYGKLPSPQTILLRMS*VLLGWF Trigger: GAACCATCCAAGCAAAACCCAGGACATTCTCAACAG...TATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGATGCACTCAAGGCAAGACCTCATGTAGCTAAGGTTCCAAATTCTGGAATGCAGGCAGTGCTATaGCAAACTCCCTTCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GKDALKARPHVAKVPNSGMQAVL*QTPFSP Trigger: TGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCAT...TCCAGAATTTGGAACCTTAGCTACATGAGGTCTTGCCTTGAGTGCATCCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CAA 90 bp | CAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTaGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: QAVLWQTPFSPNYTP*YLVAKDVREKSERV Trigger: TACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTATATCACAGTCTCATTCCCAGGCCTTCAGAGGCAAACTACACTGAATGAACAGTTCCCTATCTGTTaGGAATGTCCTGGGTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IYITVSFPGLQRQTTLNEQFPIC*ECPGFC Trigger: GCAAAACCCAGGACATTCTCAACAGATAGGGAACTG...TTCATTCAGTGTAGTTTGCCTCTGAAGGCCTGGGAATGAGACTGTGATATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CAA 90 bp | CTCAAGGCAAGACCTCATGTAGCTAAGGTTCCAAATTCTGGAAAGTaGCCTAAAATTCCTCTGTTTCTGTTAAGCACTGGATACACAAGC | + |
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Preference number: 2 (lower is better) Translates to: LKARPHVAKVPNSGK*PKIPLFLLSTGYTS Trigger: GCTTGTGTATCCAGTGCTTAACAGAAACAGAGGAATTTTAGGCAACTTTCCAGAATTTGGAACCTTAGCTACATGAGGTCTTGCCTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CAA 90 bp | TCCTTTAGAAGCCTGTTTTCTAATGAGAAAAAGAGTGAGTGGATCTaGATGGAAGTGGATCTAGGTAGGAACTGGAAGAGTAGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SFRSLFSNEKKSEWI*MEVDLGRNWKSRLG Trigger: CCCCAATCTACTCTTCCAGTTCCTACCTAGATCCACTTCCATCAAGATCCACTCACTCTTTTTCTCATTAGAAAACAGGCTTCTAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGATGCACTCAAGGCAAGACCTCATGTAGCTAAGGTTCCAAATTCTGGATTCATGAGAACAGCTTaGCGTATTTACAAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: GKDALKARPHVAKVPNSGFMRTA*RIYKQN Trigger: ATTTTGCTTGTAAATACGCCAAGCTGTTCTCATGAA...TCCAGAATTTGGAACCTTAGCTACATGAGGTCTTGCCTTGAGTGCATCCTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACAATACCTGTTGAGAATGTCCTaGGTTTTGCTTGGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LYLVAKDVREKSERVQQYLLRMS*VLLGWF Trigger: GAACCATCCAAGCAAAACCCAGGACATTCTCAACAG...GTATTGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | CTGAGGCAGCATGCATGCACAGGACCTGCAATGGTCTaGACAGGCCCTCTGCAGGCATGTTGTGACTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LRQHACTGPAMV*TGPLQACCDFH Trigger: GTGGAAGTCACAACATGCCTGCAGAGGGCCTGTGCAGACCATTGCAGGTCCTGTGCATGCATGCTGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | AGCTTCTATGATGGTGGTCCCCCACTCAGCCACTCCTaGCTCACTGCCCTAGCATTCCACTCTGCTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: SFYDGGPPLSHS*LTALAFHSAGT Trigger: TGTTCCAGCAGAGTGGAATGCTAGGGCAGTGAGGCAGGAGTGGCTGAGTGGGGGACCACCATCATAGAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | GTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATaGAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: VQLGLFLSPGTG*RQCYGKLPSPQ Trigger: TTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | AAATCCCTCCCCTTAGAGCTCAGGGAACCGAATGGATaGGGAGGCAGGAGTATGGGAACAATAGTGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: KSLPLELREPNG*GGRSMGTIVGG Trigger: GCCACCCACTATTGTTCCCATACTCCTGCCTCCTCATCCATTCGGTTCCCTGAGCTCTAAGGGGAGGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | GGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTaGTATGGCAAACTCCCTTCTCCCCAAACTATACTC | + |
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Preference number: 3 (lower is better) Translates to: GLFLSPGTGCRQ*YGKLPSPQTIL Trigger: GAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | CTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATaGCAAACTCCCTTCTCCCCAAACTATACTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LPKPRNRMQAVL*QTPFSPNYTPL Trigger: CAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | GCCTTCACAGGACCAAGGACAGGCATCCCCTTCCATTaGTGCCAGACAAGGCAATCCTATGCTTCATATGCA | + |
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Preference number: 3 (lower is better) Translates to: AFTGPRTGIPFH*CQTRQSYASYA Trigger: TGCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGGAAGGGGATGCCTGTCCTTGGTCCTGTGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | CATGCACAGGACCTGCAATGGTCTGCACAGGCCCTCTaGAGGCATGTTGTGACTTCCACTTTAGTGCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: HAQDLQWSAQAL*RHVVTSTLVLL Trigger: TAAAAGCACTAAAGTGGAAGTCACAACATGCCTGCAGAGGGCCTGTGCAGACCATTGCAGGTCCTGTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | ATCAATTTTCATGTGAACTCAGAGACTGAGGCAGCATaGATGCACAGGACCTGCAATGGTCTGCACAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: INFHVNSETEAA*MHRTCNGLHRP Trigger: GGGCCTGTGCAGACCATTGCAGGTCCTGTGCATGCATGCTGCCTCAGTCTCTGAGTTCACATGAAAATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | GAAAAGGTTGTTTCAGGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EKVVSGAGEMAQ*LRALTVLPEVL Trigger: CAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTGAAACAACCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | TGGATGAGGAGGCAGGAGTATGGGAACAATAGTGGGTaGCTGGAGAAAAACAAGAAAACAAGTCCCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: WMRRQEYGNNSG*LEKNKKTSPSR Trigger: CCTTGAGGGACTTGTTTTCTTGTTTTTCTCCAGCCACCCACTATTGTTCCCATACTCCTGCCTCCTCATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | GGTCAACATGATCAATTTTCATGTGAACTCAGAGACTaGGGCAGCATGCATGCACAGGACCTGCAATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GQHDQFSCELRD*GSMHAQDLQWS Trigger: AGACCATTGCAGGTCCTGTGCATGCATGCTGCCTCAGTCTCTGAGTTCACATGAAAATTGATCATGTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | AGTTCAAATCCCAGCAACCGCATCCGTAATGAGATCTaGTGTGCTCTTCTGGTGCATCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: SSNPSNRIRNEI*CALLVHLKTAT Trigger: TGTAGCTGTCTTCAGATGCACCAGAAGAGCACATCAGATCTCATTACGGATGCGGTTGCTGGGATTTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | CATCCCCTTCCATTGATGCCAGACAAGGCAATCCTATaGTTCATATGCAACTGGAGCCATTTGTCTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: HPLPLMPDKAIL*FICNWSHLSLS Trigger: ACTGAGAGACAAATGGCTCCAGTTGCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGGAAGGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | TCTGTTAAGCACTGGATACACAAGCTATTGTTAATGTaGCTCAAGGATGGCATGGTCCAACTGAGGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SVKHWIHKLLLM*LKDGMVQLRLA Trigger: TGCCAGCCTCAGTTGGACCATGCCATCCTTGAGTCACATTAACAATAGCTTGTGTATCCAGTGCTTAACAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | ACTGGAGCCATTTGTCTCTCAGTGTGTATTCTTTGGTaGGGATCATCAGGAAATGTAATGCCACAACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: TGAICLSVCILW*GSSGNVMPQLR Trigger: CCTCAGTTGTGGCATTACATTTCCTGATGATCCCCACCAAAGAATACACACTGAGAGACAAATGGCTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | GCAACTGGAGCCATTTGTCTCTCAGTGTGTATTCTTTaGTGGGGATCATCAGGAAATGTAATGCCACAACTG | + |
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Preference number: 3 (lower is better) Translates to: ATGAICLSVCIL*WGSSGNVMPQL Trigger: CAGTTGTGGCATTACATTTCCTGATGATCCCCACCAAAGAATACACACTGAGAGACAAATGGCTCCAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR GCA 72 bp | CCATTGATGCCAGACAAGGCAATCCTATGCTTCATATaGAACTGGAGCCATTTGTCTCTCAGTGTGTATTCT | + |
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Preference number: 3 (lower is better) Translates to: PLMPDKAILCFI*NWSHLSLSVYS Trigger: AGAATACACACTGAGAGACAAATGGCTCCAGTTGCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| 3UTR TCA 72 bp | AACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTaGGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: NNTKRTEQFPIC*ECPGFCLDGSK Trigger: TTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR CCA 72 bp | AGTTCCCTATCTGTTGAGAATGTCCTGGGTTTTGCTTaGATGGTTCTAAACAGTGACTTGGAATATGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: SSLSVENVLGFA*MVLNSDLEYES Trigger: ACTTTCATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAACAGATAGGGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| 3UTR-3UTR CAA 90 bp | GGAAGAGTAGATTGGGGGATGTATGAAAACATATTCAGAATAGATGATGTGATACCAAATTCTGGAAAGTaGCCTAAAATTCCTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GRVDWGMYENIFRIDDVIPNSGK*PKIPLF Trigger: AAACAGAGGAATTTTAGGCAACTTTCCAGAATTTGG...TATCACATCATCTATTCTGAATATGTTTTCATACATCCCCCAATCTACTCTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | CCCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATGGGACTTTGGTTGGGTaGCTCTGGGGCACCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: PRNRMQAVLWQTPFSPNYGTLVG*LWGTTD Trigger: ATCTGTGGTGCCCCAGAGTCACCCAACCAAAGTCCC...ATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | TGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATTGAAGGCCTTTCTCTaGGGAGGACTGCTCTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: CCSVGSLPKPRNRMQAVLLKAFL*GGLLCS Trigger: CGAACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAA...TAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CCA 90 bp | GCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATCTCTTTCTCGTTCTCTaGGACTTGATGCCAACGCCT | + |
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Preference number: 4 (lower is better) Translates to: AVQLGLFLSPGTGCRQCYLFLVL*DLMPTP Trigger: AGGCGTTGGCATCAAGTCCCAGAGAACGAGAAAGAG...ATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | AGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTACCCTGAATAGTCCCTaGGGAATCTGTCCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RNRMQAVLWQTPFSPNYTTLNSP*GICPRI Trigger: GATCCTGGGACAGATTCCTCAGGGACTATTCAGGGT...AGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACCACAGGTGGCCTTTaGCTCTTTGTATGCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PRNRMQAVLWQTPFSPNYTTGGL*LFVCSI Trigger: TATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGT...ATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATTTCGCTTACCACAGGTaGCCTTTGCCTCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PRNRMQAVLWQTPFSPNYFAYHR*PLPLCM Trigger: CATACAAAGAGGCAAAGGCCACCTGTGGTAAGCGAA...ATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTGTACTACTAGAATCTaGGGAGGTGCTAGAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEPDAGSAMANSLLPKLYCTTRI*GGARVV Trigger: GACGACTCTAGCACCTCCTCAGATTCTAGTAGTACA...GTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATATTCGCTTACCACAGGTaGCCTTTGCCTCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PGTGCRQCYGKLPSPQTIFAYHR*PLPLCM Trigger: CATACAAAGAGGCAAAGGCCACCTGTGGTAAGCGAA...TATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTTCGCTTACCACAGGTaGCCTTTGCCTCTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QEPDAGSAMANSLLPKLYFAYHR*PLPLCM Trigger: CATACAAAGAGGCAAAGGCCACCTGTGGTAAGCGAA...GTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | AGCCTTCACAGGACCAAGGACAGGCATCCCCTTCCATaGATGCCAGACAAGGCAATCCTATGCTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRTKDRHPLP*MPDKAILCFIC Trigger: GCATATGAAGCATAGGATTGCCTTGTCTGGCATCAATGGAAGGGGATGCCTGTCCTTGGTCCTGTGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGTTTCTGTAGCCTCTTaGCCTGATTGCTATAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVQLGLFLSPGTGCRQCYVSVAS*PDCYNA Trigger: AGCATTATAGCAATCAGGTCAAGAGGCTACAGAAAC...ATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGGCAGTTTAGATCGGCCTaGCTCTTTTTGAATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVGSLPKPRNRMQAVLWQFRSA*LFLNSL Trigger: CAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTG...CCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGGTTTCTTAGGATGCCCTaGAACAGGATGTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVGSLPKPRNRMQAVLWFLRMP*NRMSFL Trigger: AAGAAAAGACATCCTGTTTCAGGGCATCCTAAGAAA...CCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAAGGGACTTTGGTTGGGTaGCTCTGGGGCACCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVENVLGFAWMVLNSDLEGTLVG*LWGTTD Trigger: ATCTGTGGTGCCCCAGAGTCACCCAACCAAAGTCCC...TTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGGTTCCTGGGTTCTCCCTaGAATTTCATATCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVGSLPKPRNRMQAVLWFLGSP*NFISEE Trigger: TTCTTCAGATATGAAATTTCAGGGAGAACCCAGGAA...CCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATATTTCTTAGGATGCCCTaGAACAGGATGTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGTGCRQCYGKLPSPQTIFLRMP*NRMSFL Trigger: AAGAAAAGACATCCTGTTTCAGGGCATCCTAAGAAA...TATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACCATCCATTTCTGTTTaGACATTTCTCCTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGTGCRQCYGKLPSPQTIPSISV*TFLLKT Trigger: TGTTTTCAGGAGAAATGTGCAAACAGAAATGGATGG...TATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGATGCACTCAAGGCAAGACCTCATGTAGCTAAGGTTCCAAATTCTGGAGGTCAGGATGCTCCGTaGGTATTTTATTTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKDALKARPHVAKVPNSGGQDAP*VFYFCE Trigger: CTCACAAAAATAAAATACTCACGGAGCATCCTGACC...TCCAGAATTTGGAACCTTAGCTACATGAGGTCTTGCCTTGAGTGCATCCTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACAATACGGGACTTTGGTTGGGTaGCTCTGGGGCACCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLVAKDVREKSERVQQYGTLVG*LWGTTD Trigger: ATCTGTGGTGCCCCAGAGTCACCCAACCAAAGTCCC...GTATTGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGTTGAAGGCCTTTCTCTaGGGAGGACTGCTCTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVLKAFL*GGLLCS Trigger: CGAACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAA...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | AGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTACATCTGACAGTATTTaGCTCTCTGTTCCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNRMQAVLWQTPFSPNYTTSDSI*LSVPCK Trigger: TTTACAAGGAACAGAGAGCCAAATACTGTCAGATGT...AGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | AGAGTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCCAGGAGACAATCTCTTaGGCCAGAGATCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYKEDRTVPYLLRMSQETIS*ARDPAS Trigger: TGAAGCTGGATCTCTGGCTCAAGAGATTGTCTCCTG...GGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTCAGGAGACAATCTCTTaGGCCAGAGATCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANSLLPKLYSFVFSSKGCQETIS*ARDPAS Trigger: TGAAGCTGGATCTCTGGCTCAAGAGATTGTCTCCTG...ACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTTGAAGGCCTTTCTCTaGGGAGGACTGCTCTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLYSFVFSSKGCEREKLKAFL*GGLLCS Trigger: CGAACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGTCTCCAGGCTTTATTTaGAGGCCTTTCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWSPGFI*RPFSEE Trigger: CTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGA...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGACCCTGAATAGTCCCTaGGGAATCTGTCCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPKLYSFVFSSKGCEREKTLNSP*GICPRI Trigger: GATCCTGGGACAGATTCCTCAGGGACTATTCAGGGT...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CCA 90 bp | GTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCACTGCTTTATCTCTGCTaGCAGCTGACGGTATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLWQTPFSPNYTPLYLVALLYLC*QLTVFL Trigger: GAGAAATACCGTCAGCTGCCAGCAGAGATAAAGCAG...TGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CCA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGCTCTTTCTCGTTCTCTaGGACTTGATGCCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVLFLVL*DLMPTP Trigger: AGGCGTTGGCATCAAGTCCCAGAGAACGAGAAAGAG...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | TGCAACTGGAGCCATTTGTCTCTCAGTGTGTATTCTTaGGTGGGGATCATCAGGAAATGTAATGCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: CNWSHLSLSVYS*VGIIRKCNATT Trigger: AGTTGTGGCATTACATTTCCTGATGATCCCCACCAAAGAATACACACTGAGAGACAAATGGCTCCAGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | AAGGCAATCCTATGCTTCATATGCAACTGGAGCCATTaGTCTCTCAGTGTGTATTCTTTGGTGGGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KAILCFICNWSH*SLSVYSLVGII Trigger: GATGATCCCCACCAAAGAATACACACTGAGAGACAAATGGCTCCAGTTGCATATGAAGCATAGGATTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGCCTGGCTCTTTTTaGATTCTCTGGAGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNRPGSF*ILWSHL Trigger: CAGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCG...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACACAGGAGACAATCTCTTaGGCCAGAGATCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFVFSSKGCEREKRESTTQETIS*ARDPAS Trigger: TGAAGCTGGATCTCTGGCTCAAGAGATTGTCTCCTG...TGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACAATACACCCTGAATAGTCCCTaGGGAATCTGTCCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LYLVAKDVREKSERVQQYTLNSP*GICPRI Trigger: GATCCTGGGACAGATTCCTCAGGGACTATTCAGGGT...GTATTGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATATTGTACTACTAGAATCTaGGGAGGTGCTAGAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VENVLGFAWMVLNSDLEYCTTRI*GGARVV Trigger: GACGACTCTAGCACCTCCTCAGATTCTAGTAGTACA...ATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAACATGATCAATTTTCATGTGAACTCAGAGACTGAGGCAGCATGCATGTCTCTGCTTTATCTCTaGTGGCAGCTGACGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: KVNMINFHVNSETEAACMSLLYL*WQLTVF Trigger: AAATACCGTCAGCTGCCAGCAGAGATAAAGCAGAGA...CATGCATGCTGCCTCAGTCTCTGAGTTCACATGAAAATTGATCATGTTGACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGCGAGAGAGTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTACCACAGGTGGCCTTTaGCTCTTTGTATGCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RKAREYNNTKRTEQFPICTTGGL*LFVCSI Trigger: TATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGT...ACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTACTCTCTCGCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | ATTTATATCACAGTCTCATTCCCAGGCCTTCAGAGGCAAACTACACTGAATGAAACCACAGGTGGCCTTTaGCTCTTTGTATGCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: IYITVSFPGLQRQTTLNETTGGL*LFVCSI Trigger: TATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGT...TTCATTCAGTGTAGTTTGCCTCTGAAGGCCTGGGAATGAGACTGTGATATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGCGAGAGAGTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTCTGCTTTATCTCTGCTaGCAGCTGACGGTATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKAREYNNTKRTEQFPICLLYLC*QLTVFL Trigger: GAGAAATACCGTCAGCTGCCAGCAGAGATAAAGCAG...ACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTACTCTCTCGCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAACGGCCTGGCTCTTTTTaGATTCTCTGGAGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNYTPLYLVAKDVREKRPGSF*ILWSHL Trigger: CAGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCG...TTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGGGTCAGGATGCTCCGTaGGTATTTTATTTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWGQDAP*VFYFCE Trigger: CTCACAAAAATAAAATACTCACGGAGCATCCTGACC...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAAGTTTCTGTAGCCTCTTaGCCTGATTGCTATAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVENVLGFAWMVLNSDLEVSVAS*PDCYNA Trigger: AGCATTATAGCAATCAGGTCAAGAGGCTACAGAAAC...TTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACTGTACTACTAGAATCTaGGGAGGTGCTAGAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNCTTRI*GGARVV Trigger: GACGACTCTAGCACCTCCTCAGATTCTAGTAGTACA...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | GTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATATTCTCTGCTTTATCTCTaGTGGCAGCTGACGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VENVLGFAWMVLNSDLEYSLLYL*WQLTVF Trigger: AAATACCGTCAGCTGCCAGCAGAGATAAAGCAGAGA...ATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGCGAGAGAGTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTTCTGCCTCCAGACATaGTCATGTTCTTTCGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKAREYNNTKRTEQFPICFCLQT*SCSFAY Trigger: GTAAGCGAAAGAACATGAGCATGTCTGGAGGCAGAA...ACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTACTCTCTCGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAACTCTTTCTCGTTCTCTaGGACTTGATGCCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNYTPLYLVAKDVREKLFLVL*DLMPTP Trigger: AGGCGTTGGCATCAAGTCCCAGAGAACGAGAAAGAG...TTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | CTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTaGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWQTPFSPNYTP*YLVAKDVREKS Trigger: GCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | AGCCTGTTTTCTAATGAGAAAAAGAGTGAGTGGATCTaGATGGAAGTGGATCTAGGTAGGAACTGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFSNEKKSEWI*MEVDLGRNWKS Trigger: ACTCTTCCAGTTCCTACCTAGATCCACTTCCATCAAGATCCACTCACTCTTTTTCTCATTAGAAAACAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATTTTATATCTCCTTGTaGCTTCGTAGGGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVENVLGFAWMVLNSDLEFYISL*LRRDFG Trigger: ACCAAAGTCCCTACGAAGTCACAAGGAGATATAAAA...TTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGGTTTCTGTAGCCTCTTaGCCTGATTGCTATAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVVSVAS*PDCYNA Trigger: AGCATTATAGCAATCAGGTCAAGAGGCTACAGAAAC...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | ATTTACCGTTTGCCACAGCAAAGATTAAGAGACCTTCCTAAAATGTATATGCAGTCTCCAGGCTTTATTTaGAGGCCTTTCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYRLPQQRLRDLPKMYMQSPGFI*RPFSEE Trigger: CTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGA...CTGCATATACATTTTAGGAAGGTCTCTTAATCTTTGCTGTGGCAAACGGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACGATTTTGGTCAGCTGTaGGTTGCTGTACTTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNDFGQL*VAVLRV Trigger: TACCCTAAGTACAGCAACGCACAGCTGACCAAAATC...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACTCTCTGCTTTATCTCTaGTGGCAGCTGACGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNSLLYL*WQLTVF Trigger: AAATACCGTCAGCTGCCAGCAGAGATAAAGCAGAGA...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGACAGATTTCTTAGGATaGCCTGAAACAGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWTDFLG*PETGCL Trigger: AAGACATCCTGTTTCAGGGCATCCTAAGAAATCTGT...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | GTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAACAGATTTCTTAGGATaGCCTGAAACAGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLWQTPFSPNYTPLYLVATDFLG*PETGCL Trigger: AAGACATCCTGTTTCAGGGCATCCTAAGAAATCTGT...TGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACATTCTGCCTCCAGACATaGTCATGTTCTTTCGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SFVFSSKGCEREKRESTTFCLQT*SCSFAY Trigger: GTAAGCGAAAGAACATGAGCATGTCTGGAGGCAGAA...TGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAACTGCTTTATCTCTGCTaGCAGCTGACGGTATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNYTPLYLVAKDVREKLLYLC*QLTVFL Trigger: GAGAAATACCGTCAGCTGCCAGCAGAGATAAAGCAG...TTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACATTCTCTGGAGTCATCTaGTGGGATATTATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFVFSSKGCEREKRESTTFSGVI*WDIMLH Trigger: ATGGAGCATAATATCCCATCAGATGACTCCAGAGAA...TGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACTTCTCTGGAGTCATCTaGTGGGATATTATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNFSGVI*WDIMLH Trigger: ATGGAGCATAATATCCCATCAGATGACTCCAGAGAA...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGTTTGCACATTTCTCCTaGAAACAGTCCAAAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVFAHFS*KQSKSY Trigger: GTAGCTTTTGGACTGTTTTCAGGAGAAATGTGCAAA...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATATTTTGCACATTTCTCCTaGAAACAGTCCAAAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VENVLGFAWMVLNSDLEYFAHFS*KQSKSY Trigger: GTAGCTTTTGGACTGTTTTCAGGAGAAATGTGCAAA...ATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGTTTGCACATTTCTCCTaGAAACAGTCCAAAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWQTPFSPNYTPLYLVAKFAHFS*KQSKSY Trigger: GTAGCTTTTGGACTGTTTTCAGGAGAAATGTGCAAA...CTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATATTTTTATATCTCCTTGTaGCTTCGTAGGGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VENVLGFAWMVLNSDLEYFYISL*LRRDFG Trigger: ACCAAAGTCCCTACGAAGTCACAAGGAGATATAAAA...ATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCACTGAAATTTCATATCTaGAGAAACTGTTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLWQTPFSPNYTPLYLVALKFHI*RNCSGR Trigger: TCTCCCAGAACAGTTTCTTCAGATATGAAATTTCAG...TGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | GCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTTTCCTGGGTTCTCCCTaGAATTTCATATCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ANSLLPKLYSFVFSSKGCFLGSP*NFISEE Trigger: TTCTTCAGATATGAAATTTCAGGGAGAACCCAGGAA...ACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CAAATAAAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCTCTCCAGGCTTTATTTaGAGGCCTTTCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIKCKYFMCCSVGSLPKPSPGFI*RPFSEE Trigger: CTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGA...GGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTTTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGCCATCCATTTCTGTTTaGACATTTCTCCTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWPSISV*TFLLKT Trigger: TGTTTTCAGGAGAAATGTGCAAACAGAAATGGATGG...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | GTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCACCATCCATTTCTGTTTaGACATTTCTCCTGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLWQTPFSPNYTPLYLVAPSISV*TFLLKT Trigger: TGTTTTCAGGAGAAATGTGCAAACAGAAATGGATGG...TGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | TTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACAATACTTCTGCCTCCAGACATaGTCATGTTCTTTCGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LYLVAKDVREKSERVQQYFCLQT*SCSFAY Trigger: GTAAGCGAAAGAACATGAGCATGTCTGGAGGCAGAA...GTATTGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCAGTTTAGATCGGCCTaGCTCTTTTTGAATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNQFRSA*LFLNSL Trigger: CAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTG...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGACATCTGACAGTATTTaGCTCTCTGTTCCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWTSDSI*LSVPCK Trigger: TTTACAAGGAACAGAGAGCCAAATACTGTCAGATGT...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | ATTTACCGTTTGCCACAGCAAAGATTAAGAGACCTTCCTAAAATGTATATGCAGTTCTCTGGAGTCATCTaGTGGGATATTATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IYRLPQQRLRDLPKMYMQFSGVI*WDIMLH Trigger: ATGGAGCATAATATCCCATCAGATGACTCCAGAGAA...CTGCATATACATTTTAGGAAGGTCTCTTAATCTTTGCTGTGGCAAACGGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | ATTTACCGTTTGCCACAGCAAAGATTAAGAGACCTTCCTAAAATGTATATGCAGGGTCAGGATGCTCCGTaGGTATTTTATTTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYRLPQQRLRDLPKMYMQGQDAP*VFYFCE Trigger: CTCACAAAAATAAAATACTCACGGAGCATCCTGACC...CTGCATATACATTTTAGGAAGGTCTCTTAATCTTTGCTGTGGCAAACGGTAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTTTCTTAGGATGCCCTaGAACAGGATGTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKLYSFVFSSKGCEREKFLRMP*NRMSFL Trigger: AAGAAAAGACATCCTGTTTCAGGGCATCCTAAGAAA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTTTTATATCTCCTTGTaGCTTCGTAGGGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPKLYSFVFSSKGCEREKFYISL*LRRDFG Trigger: ACCAAAGTCCCTACGAAGTCACAAGGAGATATAAAA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | CTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGCTGAAATTTCATATCTaGAGAAACTGTTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWQTPFSPNYTPLYLVAKLKFHI*RNCSGR Trigger: TCTCCCAGAACAGTTTCTTCAGATATGAAATTTCAG...CTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACATTCCTGGGTTCTCCCTaGAATTTCATATCTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFVFSSKGCEREKRESTTFLGSP*NFISEE Trigger: TTCTTCAGATATGAAATTTCAGGGAGAACCCAGGAA...TGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR GCA 90 bp | CAAATAAAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCGATTTTGGTCAGCTGTaGGTTGCTGTACTTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QIKCKYFMCCSVGSLPKPDFGQL*VAVLRV Trigger: TACCCTAAGTACAGCAACGCACAGCTGACCAAAATC...GGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTTTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAACAGTTTAGATCGGCCTaGCTCTTTTTGAATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNYTPLYLVAKDVREKQFRSA*LFLNSL Trigger: CAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTG...TTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCTGAAATTTCATATCTaGAGAAACTGTTCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNLKFHI*RNCSGR Trigger: TCTCCCAGAACAGTTTCTTCAGATATGAAATTTCAG...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| 3UTR CAA 72 bp | TTACTTACTCTGAATATCAGAGGTGATATTTACCGTTaGCCACAGCAAAGATTAAGAGACCTTCCTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLTLNIRGDIYR*PQQRLRDLPKM Trigger: CATTTTAGGAAGGTCTCTTAATCTTTGCTGTGGCAAACGGTAAATATCACCTCTGATATTCAGAGTAAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGGTACCACAGGTGGCCTTaGCCTCTTTGTATGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSVGSLPKPRNRMQAVLWYHRWP*PLCMQH Trigger: ATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGTA...CCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATATACCACAGGTGGCCTTaGCCTCTTTGTATGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGTGCRQCYGKLPSPQTIYHRWP*PLCMQH Trigger: ATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGTA...TATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | CAGGAACCGGATGCAGGCAGTGCTATGGCAAACTCCCTTCTCCCCAAACTATACGTGGCCTTTGCCTCTTaGTATGCAGCATATTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QEPDAGSAMANSLLPKLYVAFAS*YAAYSS Trigger: TGAGGAATATGCTGCATACAAAGAGGCAAAGGCCAC...GTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS TCA 90 bp | TCTGTCCCAGGATCTAATAGCTCCTCTACCTCTCCAGGCTTTATTTaGAGGCCTTTCTCTGAGGAGGACTGCTCTGTTCGTCCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPGSNSSSTSPGFI*RPFSEEDCSVRPNL Trigger: CAAGTTTGGACGAACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGAGGTAGAGGAGCTATTAGATCCTGGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGATGCACTCAAGGCAAGACCTCATGTAGCTAAGGTTCCAAATTCTGGATTGGTCAGCTGTGCGTaGCTGTACTTAGGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: GKDALKARPHVAKVPNSGLVSCA*LYLGYI Trigger: GATGTACCCTAAGTACAGCAACGCACAGCTGACCAA...TCCAGAATTTGGAACCTTAGCTACATGAGGTCTTGCCTTGAGTGCATCCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTATGGTCTTCTTTCTCCTTCTaGAAGTCCATGATATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSVGSLPKPRNRMQAVLWSSFSF*KSMIYL Trigger: GAGATATATCATGGACTTCAAGAAGGAGAAAGAAGA...CCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACCGGATGCAGGCAGTGCTAACAGGATGTCTTTTCTaGAATTGCCTCATCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCSVGSLPKPRNRMQAVLTGCLF*NCLIFF Trigger: GAAAAAGATGAGGCAATTCAAGAAAAGACATCCTGT...TAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
||
| CDS-3UTR CAA 90 bp | GTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTGAGAATGTCCTGGTTGGTCAGCTGTGCGTaGCTGTACTTAGGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: VQQYKEDRTVPYLLRMSWLVSCA*LYLGYI Trigger: GATGTACCCTAAGTACAGCAACGCACAGCTGACCAA...CCAGGACATTCTCAACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | GTGCTATGGCAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAGTGGCCTTTGCCTCTTaGTATGCAGCATATTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: VLWQTPFSPNYTPLYLVAVAFAS*YAAYSS Trigger: TGAGGAATATGCTGCATACAAAGAGGCAAAGGCCAC...TGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTGCCATAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | AGAAAAGCGAGAGAGTACAACAATACAAAGAGGACAGAACAGTTCCCTATCTGTTACCACAGGTGGCCTTaGCCTCTTTGTATGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: RKAREYNNTKRTEQFPICYHRWP*PLCMQH Trigger: ATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGTA...ACAGATAGGGAACTGTTCTGTCCTCTTTGTATTGTTGTACTCTCTCGCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGTCGGCCTGGCTCTTTTaGAATTCTCTGGAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVSAWLF*NSLESS Trigger: AGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGA...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGGTGGCCTTTGCCTCTTaGTATGCAGCATATTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVVAFAS*YAAYSS Trigger: TGAGGAATATGCTGCATACAAAGAGGCAAAGGCCAC...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTCGGCCTGGCTCTTTTaGAATTCTCTGGAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LPKLYSFVFSSKGCEREKSAWLF*NSLESS Trigger: AGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | TTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGCGAGAGAGTACAACAATACTTGGTCAGCTGTGCGTaGCTGTACTTAGGGTACATC | + |
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Preference number: 5 (lower is better) Translates to: LYLVAKDVREKSERVQQYLVSCA*LYLGYI Trigger: GATGTACCCTAAGTACAGCAACGCACAGCTGACCAA...GTATTGTTGTACTCTCTCGCTTTTCTCTCTCACATCCTTTGCTACTAAATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CAAATAAAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCTCGGCCTGGCTCTTTTaGAATTCTCTGGAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: QIKCKYFMCCSVGSLPKPSAWLF*NSLESS Trigger: AGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGA...GGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTTTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | AAATGTAAATATTTTATGTGCTGTTCAGTTGGGTCTCTTCCTAAGCCCAGGAACTCCATCCATTTCTGTTaGCACATTTCTCCTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: KCKYFMCCSVGSLPKPRNSIHFC*HISPEN Trigger: GTTTTCAGGAGAAATGTGCAAACAGAAATGGATGGA...GTTCCTGGGCTTAGGAAGAGACCCAACTGAACAGCACATAAAATATTTACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTCCATCCATTTCTGTTaGCACATTTCTCCTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: LPKLYSFVFSSKGCEREKSIHFC*HISPEN Trigger: GTTTTCAGGAGAAATGTGCAAACAGAAATGGATGGA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CAAACTCCCTTCTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGTCTTCTTTCTCCTTCTaGAAGTCCATGATATATCTC | + |
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Preference number: 5 (lower is better) Translates to: QTPFSPNYTPLYLVAKDVSSFSF*KSMIYL Trigger: GAGATATATCATGGACTTCAAGAAGGAGAAAGAAGA...CACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAGAAGGGAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | GTTGAGAATGTCCTGGGTTTTGCTTGGATGGTTCTAAACAGTGACTTGGAATATACAGGATGTCTTTTCTaGAATTGCCTCATCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VENVLGFAWMVLNSDLEYTGCLF*NCLIFF Trigger: GAAAAAGATGAGGCAATTCAAGAAAAGACATCCTGT...ATATTCCAAGTCACTGTTTAGAACCATCCAAGCAAAACCCAGGACATTCTCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAACTATACTCCTTTGTATTTAGTAGCAAAGGATGTGAGAGAGAAAAGTCTTCTTTCTCCTTCTaGAAGTCCATGATATATCTC | + |
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Preference number: 5 (lower is better) Translates to: LPKLYSFVFSSKGCEREKSSFSF*KSMIYL Trigger: GAGATATATCATGGACTTCAAGAAGGAGAAAGAAGA...CTTTTCTCTCTCACATCCTTTGCTACTAAATACAAAGGAGTATAGTTTGGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS GCA 72 bp | CTGTTCGTCCAAACTTGGAGCTTCTGCCTCCAGACATaGTCATGTTCTTTCGCTTACCACAGGTGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFVQTWSFCLQT*SCSFAYHRWPL Trigger: CAAAGGCCACCTGTGGTAAGCGAAAGAACATGAGCATGTCTGGAGGCAGAAGCTCCAAGTTTGGACGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS TCA 72 bp | ATATCTCCTTGTGACTTCGTAGGGACTTTGGTTGGGTaGCTCTGGGGCACCACAGATTTCTTAGGATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ISPCDFVGTLVG*LWGTTDFLGCP Trigger: AGGGCATCCTAAGAAATCTGTGGTGCCCCAGAGTCACCCAACCAAAGTCCCTACGAAGTCACAAGGAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS TCA 72 bp | GGATCTAATAGCTCCTCTACCTCTCCAGGCTTTATTTaGAGGCCTTTCTCTGAGGAGGACTGCTCTGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: GSNSSSTSPGFI*RPFSEEDCSVR Trigger: ACGAACAGAGCAGTCCTCCTCAGAGAAAGGCCTTCAAATAAAGCCTGGAGAGGTAGAGGAGCTATTAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS GCA 72 bp | CTTTCGCTTACCACAGGTGGCCTTTGCCTCTTTGTATaGAGCATATTCCTCAGGAGACAATCTCTTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLTTGGLCLFV*SIFLRRQSLEP Trigger: TGGCTCAAGAGATTGTCTCCTGAGGAATATGCTGCATACAAAGAGGCAAAGGCCACCTGTGGTAAGCGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS TCA 72 bp | GTGACTCTGGGGCACCACAGATTTCTTAGGATGCCCTaGAACAGGATGTCTTTTCTTGAATTGCCTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: VTLGHHRFLRMP*NRMSFLELPHL Trigger: AAGATGAGGCAATTCAAGAAAAGACATCCTGTTTCAGGGCATCCTAAGAAATCTGTGGTGCCCCAGAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS CCA 72 bp | AGTCCAAAAGCTACTTTGCTCCAGTTTAGATCGGCCTaGCTCTTTTTGAATTCTCTGGAGTCATCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: SPKATLLQFRSA*LFLNSLESSDG Trigger: CCCATCAGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTGGAGCAAAGTAGCTTTTGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS CCA 72 bp | CTTGACCTGATTGCTATAATGCTCTTTCTCGTTCTCTaGGACTTGATGCCAACGCCTGCTAATTTCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: LDLIAIMLFLVL*DLMPTPANFNP Trigger: TGGGTTGAAATTAGCAGGCGTTGGCATCAAGTCCCAGAGAACGAGAAAGAGCATTATAGCAATCAGGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS TCA 72 bp | GATCCAGCTTCACCCTGTATTGTTTCTGTAGCCTCTTaGCCTGATTGCTATAATGCTCTTTCTCGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DPASPCIVSVAS*PDCYNALSRSL Trigger: CAGAGAACGAGAAAGAGCATTATAGCAATCAGGTCAAGAGGCTACAGAAACAATACAGGGTGAAGCTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS TCA 72 bp | CTACTTTGCTCCAGTTTAGATCGGCCTGGCTCTTTTTaGATTCTCTGGAGTCATCTGATGGGATATTATGCT | + |
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Preference number: 6 (lower is better) Translates to: LLCSSLDRPGSF*ILWSHLMGYYA Trigger: AGCATAATATCCCATCAGATGACTCCAGAGAATTCAAAAAGAGCCAGGCCGATCTAAACTGGAGCAAAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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| CDS GCA 72 bp | AAGAAAACTTGGCTTCTTGCACTAATTCTGTCAGTGTaGGGAACTTCCTTAAATTATAAGAAATCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: KKTWLLALILSV*GTSLNYKKSPS Trigger: GGATGGAGATTTCTTATAATTTAAGGAAGTTCCGCACACTGACAGAATTAGTGCAAGAAGCCAAGTTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098973.3 ENSMUST00000164441.2 ENSMUST00000169398.3 |
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