Pregenerated sensors for UBTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025171Ensembl transcript IDs: ENSMUST00000026170.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGGCAAGGCCTGTGTGTGGCAGGCAGCACTGCTCCCTGGGTGCTaGGCACTGGTGGATCCAGTGCCCCAGAGGGCAAGTCCCTTCGCA | + |
|
Preference number: 1 (lower is better) Translates to: VGKACVWQAALLPGC*ALVDPVPQRASPFA Trigger: TGCGAAGGGACTTGCCCTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACACACAGGCCTTGCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 90 bp | AGGCCTGTGTGTGGCAGGCAGCACTGCTCCCTGGGTGCTGAGCACTaGTGGATCCAGTGCCCCAGAGGGCAAGTCCCTTCGCAGCTCACT | + |
|
Preference number: 1 (lower is better) Translates to: RPVCGRQHCSLGAEH*WIQCPRGQVPSQLT Trigger: AGTGAGCTGCGAAGGGACTTGCCCTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACACACAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 90 bp | CTCCAAGGTTGGCAAGGCCTGTGTGTGGCAGGCAGCACTGCTCCCTaGGTGCTGAGCACTGGTGGATCCAGTGCCCCAGAGGGCAAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: LQGWQGLCVAGSTAP*VLSTGGSSAPEGKS Trigger: GGACTTGCCCTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACACACAGGCCTTGCCAACCTTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR GCA 90 bp | CCAGGACGGCCCCCATGGCTCCAACCTGTGGTGGAGAGTGCCATGTaGCTTTTCTCCAAGGTTGGCAAGGCCTGTGTGTGGCAGGCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: PGRPPWLQPVVESAM*LFSKVGKACVWQAA Trigger: TGCTGCCTGCCACACACAGGCCTTGCCAACCTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR GCA 90 bp | CAGGTCGCCAGGACGGCCCCCATGGCTCCAACCTGTGGTGGAGAGTaGCATGTGCCTTTTCTCCAAGGTTGGCAAGGCCTGTGTGTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: QVARTAPMAPTCGGE*HVPFLQGWQGLCVA Trigger: TGCCACACACAGGCCTTGCCAACCTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGGCGACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATaGCTCCAACCTGTGGTGGAGAGTGCCATGTGCCTTTTCTCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: EHSVAPDDRSPGRPP*LQPVVESAMCLFSK Trigger: CTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR TCA 90 bp | CTGCCTGGGTTACAGTTGGGGACAGCCCTGTGCAAACCCCTGCCATaGAGCCTGGCTATCCAGCCACCCGCCTCATCTCTGCAGATTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LPGLQLGTALCKPLP*SLAIQPPASSLQIV Trigger: CACAATCTGCAGAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCAACTGTAACCCAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTaGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAAC | + |
|
Preference number: 1 (lower is better) Translates to: AIASNPEQKTGVSTA*HQMTGRQDGPHGSN Trigger: GTTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 90 bp | GGTTACAGTTGGGGACAGCCCTGTGCAAACCCCTGCCATGAAGCCTaGCTATCCAGCCACCCGCCTCATCTCTGCAGATTGTGCTGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: GYSWGQPCANPCHEA*LSSHPPHLCRLCWV Trigger: CACCCAGCACAATCTGCAGAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCAACTGTAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCTCCCCATCAGAAGACAGCAGCACTaGAAGGCGGCAGGACTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: EAHLKLLKPWGPPGSLPIRRQQH*KAAGLG Trigger: GCCCAGTCCTGCCGCCTTCCAGTGCTGCTGTCTTCT...GATGGGGAGGGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGCAGAGAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCAGGGGACTGGCACTGTaGCCAGGGCAGAGTCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: RGREAHLKLLKPWGPPGSRGLAL*PGQSHG Trigger: ACCATGACTCTGCCCTGGGCACAGTGCCAGTCCCCT...GGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTCTCTGCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAAGGCAAGGCCTGTGTGTaGCAGGCAGCACTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQGKACV*QAALLP Trigger: AGGGAGCAGTGCTGCCTGCCACACACAGGCCTTGCC...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGCAGAGAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCAGGGCAGAGTCATGGTaGGGGATAAAGGGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: RGREAHLKLLKPWGPPGSRAESW*GIKGRQ Trigger: CTGTCTCCCCTTTATCCCTCACCATGACTCTGCCCT...GGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTCTCTGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCTCCCCATCCCTTTTCTCCAAGGTTaGCAAGGCCTGTGTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EAHLKLLKPWGPPGSLPIPFLQG*QGLCVA Trigger: TGCCACACACAGGCCTTGCCAACCTTGGAGAAAAGG...GATGGGGAGGGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGCTGCTCCCTGGGTGCTaGGCACTGGTGGATCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AIASNPEQKTGVSTAWHQLLPGC*ALVDPV Trigger: CACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAG...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGTGTGGCAGGCAGCACTaGTCCCTGGGTGCTGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: AIASNPEQKTGVSTAWHQCGRQH*SLGAEH Trigger: GTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACA...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGCACTGGTGGATCCAGTaGCCCAGAGGGCAAGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: AIASNPEQKTGVSTAWHQHWWIQ*PRGQVP Trigger: AGGGACTTGCCCTCTGGGGCACTGGATCCACCAGTG...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCGGAAGGCGGCAGGACTaGGCCCCACAGCCTGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTGRRQD*APQPAG Trigger: CCCTGCAGGCTGTGGGGCCCAGTCCTGCCGCCTTCC...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCCATACAGCAGGGCGGTaGGAGGCGCCCCTGAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTHTAGR*EAPLKK Trigger: CTTCTTCAGGGGCGCCTCCCACCGCCCTGCTGTATG...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCGGCAGCACTGCTCCCTaGGTGCTGAGCACTGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTGSTAP*VLSTGG Trigger: TCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCC...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCTGCAAACCCCTGCCATaGAGCCTGGCTATCCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTCKPLP*SLAIQP Trigger: TGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCA...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCCATGGCTCCAACCTGTaGTGGAGAGTGCCATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTHGSNL*WRVPCA Trigger: GGCACATGGCACTCTCCACCACAGGTTGGAGCCATG...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCAGCAGAAAACTGGAGTaGGCACAGCGTGGCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTSRKLE*AQRGTR Trigger: TCTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCT...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCAATTGCTTCCAACCCTaGGCAGAAAACTGGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTNCFQP*AENWSE Trigger: CTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATT...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | GGCAGGCAGCACTGCTCCCTGGGTGCTGAGCACTGGTaGATCCAGTGCCCCAGAGGGCAAGTCCCTTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRQHCSLGAEHW*IQCPRGQVPSQ Trigger: CTGCGAAGGGACTTGCCCTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR TCA 72 bp | GCCTGTGTGTGGCAGGCAGCACTGCTCCCTGGGTGCTaGGCACTGGTGGATCCAGTGCCCCAGAGGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ACVWQAALLPGC*ALVDPVPQRAS Trigger: ACTTGCCCTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACACACAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | TGGCAAGGCCTGTGTGTGGCAGGCAGCACTGCTCCCTaGGTGCTGAGCACTGGTGGATCCAGTGCCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WQGLCVAGSTAP*VLSTGGSSAPE Trigger: CTCTGGGGCACTGGATCCACCAGTGCTCAGCACCCAGGGAGCAGTGCTGCCTGCCACACACAGGCCTTGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR TCA 72 bp | CTAAGAGCCATACAGCAGGGCGGTGGGAGGCGCCCCTaGAGAAGACAGCAGCACTGGAAGGCGGCAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LRAIQQGGGRRP*RRQQHWKAAGL Trigger: CAGTCCTGCCGCCTTCCAGTGCTGCTGTCTTCTTCAGGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | GTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATaGCTCCAACCTGTGGTGGAGAGTGCCATGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VAPDDRSPGRPP*LQPVVESAMCL Trigger: AAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAAGCCTTTTCTCCAAGGTaGGCAAGGCCTGTGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQAFSPR*ARPVCG Trigger: GCCACACACAGGCCTTGCCAACCTTGGAGAAAAGGC...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | GGTCGCCAGGACGGCCCCCATGGCTCCAACCTGTGGTaGAGAGTGCCATGTGCCTTTTCTCCAAGGTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRQDGPHGSNLW*RVPCAFSPRLA Trigger: TGCCAACCTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGGCGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR GCA 72 bp | AGGACGGCCCCCATGGCTCCAACCTGTGGTGGAGAGTaGCATGTGCCTTTTCTCCAAGGTTGGCAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTAPMAPTCGGE*HVPFLQGWQGL Trigger: CAGGCCTTGCCAACCTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR GCA 72 bp | CTGGGTTACAGTTGGGGACAGCCCTGTGCAAACCCCTaGCATGAAGCCTGGCTATCCAGCCACCCGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGYSWGQPCANP*HEAWLSSHPPH Trigger: ATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCAACTGTAACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | CCTTCGCAGCTCACTAAGAGCCATACAGCAGGGCGGTaGGAGGCGCCCCTGAAGAAGACAGCAGCACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSQLTKSHTAGR*EAPLKKTAALE Trigger: TTCCAGTGCTGCTGTCTTCTTCAGGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAGTGAGCTGCGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | ACAGGTCGCCAGGACGGCCCCCATGGCTCCAACCTGTaGTGGAGAGTGCCATGTGCCTTTTCTCCAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGRQDGPHGSNL*WRVPCAFSPRL Trigger: CAACCTTGGAGAAAAGGCACATGGCACTCTCCACCACAGGTTGGAGCCATGGGGGCCGTCCTGGCGACCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR CCA 72 bp | TGGGGACAGCCCTGTGCAAACCCCTGCCATGAAGCCTaGCTATCCAGCCACCCGCCTCATCTCTGCAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: WGQPCANPCHEA*LSSHPPHLCRL Trigger: CAATCTGCAGAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR TCA 72 bp | TTACAGTTGGGGACAGCCCTGTGCAAACCCCTGCCATaGAGCCTGGCTATCCAGCCACCCGCCTCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLGTALCKPLP*SLAIQPPASSL Trigger: CAGAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGGCTGTCCCCAACTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCCTGCCTGGGTTACAGTaGGGGACAGCCCTGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTLPGLQ*GTALCK Trigger: TTTGCACAGGGCTGTCCCCAACTGTAACCCAGGCAG...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAAAGCTGCCTCTTGAGTTaGCCCACCGTGTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQSCLLS*PTVSGR Trigger: CCTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCT...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAACATCCCAGATCTCCTTaGGGCCCTCAAAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQHPRSP*GPQRQV Trigger: CACCTGCCTTTGAGGGCCGCAAGGAGATCTGGGATG...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCTTCGCAGCTCACTAAGAGCCATACAGCAGGGCGGTGGGAGGCGCCCCGCCAGGATGGCTCAATaGCCTCCTGGCTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLRSSLRAIQQGGGRRPARMAQ*PPGCAA Trigger: AGCTGCACAGCCAGGAGGGCATTGAGCCATCCTGGC...GGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAGTGAGCTGCGAAGGGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | AGAGGCAGAGAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCGAGGCGCACTTTCAGTaGGAATTCACGGCGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: RGREAHLKLLKPWGPPGSEAHFQ*EFTAHT Trigger: AGTGTGCGCCGTGAATTCCCACTGAAAGTGCGCCTC...GGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTCTCTGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCTGTGCAGCTGCCTCTTaGGTTGCCCCACCGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCANPCHEAWLSSHPPHLCAAAS*VAPPCQ Trigger: CTGACACGGTGGGGCAACTCAAGAGGCAGCTGCACA...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCTCCCCATCGCTGCCCATCAGTCATaGGATAGTCACTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EAHLKLLKPWGPPGSLPIAAHQS*DSHSST Trigger: AGTGGAAGAGTGACTATCCCATGACTGATGGGCAGC...GATGGGGAGGGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | AAGTCCCTTCGCAGCTCACTAAGAGCCATACAGCAGGGCGGTGGGAGGCGCCCCTCACGTCCTTGCCTGTaGAGAGGCGCACTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLRSSLRAIQQGGGRRPSRPCL*RGALSV Trigger: CACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGA...GGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAGTGAGCTGCGAAGGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCTGGGGTGGTGGGGGCTaGTTGATGATGACCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PCANPCHEAWLSSHPPHLWGGGG*LMMTWM Trigger: CATCCAGGTCATCATCAACCAGCCCCCACCACCCCA...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCTTCGCAGCTCACTAAGAGCCATACAGCAGGGCGGTGGGAGGCGCCCCAGAACTCATCTCGTTTaGTCCGCAGCTGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLRSSLRAIQQGGGRRPRTHLV*SAAAHQ Trigger: CTGATGGGCAGCTGCGGAGCAAACGAGATGAGTTCT...GGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAGTGAGCTGCGAAGGGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCCTCTCCTCCTCCGTGTaGTCCAGCAGCAAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PCANPCHEAWLSSHPPHLLSSSV*SSSKFT Trigger: TGTGAACTTGCTGCTGGAGCACACGGAGGAGGAGAG...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCTCACAAAGAGTTCCATaGGGCAGGGTGATGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCANPCHEAWLSSHPPHLSQRVP*GRVMLA Trigger: AGCCAGCATCACCCTGCCTCATGGAACTCTTTGTGA...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCCAGCAAGTTCACAGGTaGGGACAGGCAATAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCANPCHEAWLSSHPPHLQQVHR*GQAIDG Trigger: CCCATCTATTGCCTGTCCCCACCTGTGAACTTGCTG...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR TCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGTTCCATGAGGCAGGGTaGTGCTGGCTCCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIASNPEQKTGVSTAWHQFHEAG*CWLHPG Trigger: TCCTGGATGGAGCCAGCATCACCCTGCCTCATGGAA...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGTCTTCAAGGGCTCATTaGGACCTGCTCGCTTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIASNPEQKTGVSTAWHQSSRAH*DLLACG Trigger: CCCGCAAGCGAGCAGGTCGCAATGAGCCCTTGAAGA...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGATGCCCTCCTGGCTGTaGAGCTGCCTCTTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIASNPEQKTGVSTAWHQMPSWL*SCLLSC Trigger: GCAACTCAAGAGGCAGCTGCACAGCCAGGAGGGCAT...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCGGGCTCATTGCGACCTaGTCGCTTGCGGGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTGLIAT*SLAGVS Trigger: GGACACCCCCGCAAGCGAGCAGGTCGCAATGAGCCC...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGGCCCTCAAAGGCAGGTaGTGTGTCCCAGAACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AIASNPEQKTGVSTAWHQALKGR*CVPELI Trigger: GATGAGTTCTGGGACACAGCACCTGCCTTTGAGGGC...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR TCA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGAGTCACTCTTCCACTTaGGCCGCTCCTTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIASNPEQKTGVSTAWHQSHSST*AAPSSR Trigger: CCTTGAAGAAGGAGCGGCTCAAGTGGAAGAGTGACT...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCGGGACAGGCAATAGATaGGCAGTTGATAGCGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTGTGNR*AVDSGY Trigger: GTAACCGCTATCAACTGCCCATCTATTGCCTGTCCC...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR TCA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCATGACGAAGTCTTTTTaGATCTTTGTTTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTMTKSF*IFVSWS Trigger: GCTCCAGGAAACAAAGATTCAAAAAGACTTCGTCAT...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCTCCCCATCTTGCGACCTGCTCGCTaGCGGGGGTGTCCCGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAHLKLLKPWGPPGSLPILRPAR*RGCPGA Trigger: TGCTCCGGGACACCCCCGCAAGCGAGCAGGTCGCAA...GATGGGGAGGGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAGAGAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCAGCTGCCTCTTGAGTaGCCCCACCGTGTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGREAHLKLLKPWGPPGSQLPLE*PHRVRQ Trigger: CTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCTG...GGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTCTCTGCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAGAGAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCGCATCCCAGATCTCCTaGCGGCCCTCAAAGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGREAHLKLLKPWGPPGSASQIS*RPSKAG Trigger: ACCTGCCTTTGAGGGCCGCAAGGAGATCTGGGATGC...GGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTCTCTGCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAAGGTGGTGGGGGCTGGTaGATGATGACCTGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQGGGGW*MMTWMT Trigger: CGTCATCCAGGTCATCATCAACCAGCCCCCACCACC...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CCA 90 bp | GGCATTGAGCCTCACGTCCTTGCCTGTGGAGAGGCGCACTTTCAGTaGGAATTCACGGCGCACACTAGGGGTGGGCTCGGGAGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GIEPHVLACGEAHFQ*EFTAHTRGGLGRLQ Trigger: CTGGAGCCTCCCGAGCCCACCCCTAGTGTGCGCCGTGAATTCCCACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGAGGCTCAATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCCCTTCGCAGCTCACTAAGAGCCATACAGCAGGGCGGTGGGAGGCGCCCCTCAGGCAGGCTGGCATaGAGCCTCACGTCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSLRSSLRAIQQGGGRRPSGRLA*SLTSLP Trigger: AGGCAAGGACGTGAGGCTCAATGCCAGCCTGCCTGA...GGGGCGCCTCCCACCGCCCTGCTGTATGGCTCTTAGTGAGCTGCGAAGGGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GAGCACAGCGTGGCACCAGATGACAGGTCGCCAGGACGGCCCCCATGGCTCCAACAGAACTCATCTCGTTaGCTCCGCAGCTGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EHSVAPDDRSPGRPPWLQQNSSR*LRSCPS Trigger: TGATGGGCAGCTGCGGAGCAAACGAGATGAGTTCTG...TTGGAGCCATGGGGGCCGTCCTGGCGACCTGTCATCTGGTGCCACGCTGTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS GCA 90 bp | AACCATCTCTGCCAGGATGGCTCAATGCCCTCCTGGCTGTGCAGCTaGCTCTTGAGTTGCCCCACCGTGTCAGGCAGGCTGGCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NHLCQDGSMPSWLCS*LLSCPTVSGRLALS Trigger: GCTCAATGCCAGCCTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCTGCACAGCCAGGAGGGCATTGAGCCATCCTGGCAGAGATGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS GCA 90 bp | GAGAAGAACCATCTCTGCCAGGATGGCTCAATGCCCTCCTGGCTGTaGAGCTGCCTCTTGAGTTGCCCCACCGTGTCAGGCAGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKNHLCQDGSMPSWL*SCLLSCPTVSGRLA Trigger: TGCCAGCCTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCTGCACAGCCAGGAGGGCATTGAGCCATCCTGGCAGAGATGGTTCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS GCA 90 bp | AGCCTTGAGGGCATCCCAGATCTCCTTGCGGCCCTCAAAGGCAGGTaGTGTGTCCCAGAACTCATCTCGTTTGCTCCGCAGCTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLEGIPDLLAALKGR*CVPELISFAPQLPI Trigger: GATGGGCAGCTGCGGAGCAAACGAGATGAGTTCTGGGACACAGCACCTGCCTTTGAGGGCCGCAAGGAGATCTGGGATGCCCTCAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGCAAACCCCTGCCATGAAGCCTGGCTATCCAGCCACCCGCCTCATCTCGCAATAGATGGGCAGTaGATAGCGGTTACCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCANPCHEAWLSSHPPHLAIDGQ*IAVTQL Trigger: GAGCTGGGTAACCGCTATCAACTGCCCATCTATTGC...GAGATGAGGCGGGTGGCTGGATAGCCAGGCTTCATGGCAGGGGTTTGCACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCACCTGAAGCTCCTTAAGCCCTGGGGCCCACCGGGCTCCCTCCCCATCAGTCTTTTTGAATCTTaGTTTCCTGGAGCCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAHLKLLKPWGPPGSLPISLFES*FPGALC Trigger: GCACAAGGCTCCAGGAAACAAAGATTCAAAAAGACT...GATGGGGAGGGAGCCCGGTGGGCCCCAGGGCTTAAGGAGCTTCAGGTGGGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGCTGTGCAGCTGCCTCTaGAGTTGCCCCACCGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIASNPEQKTGVSTAWHQLCSCL*SCPTVS Trigger: TGACACGGTGGGGCAACTCAAGAGGCAGCTGCACAG...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CCA 90 bp | CCGTGTGCTCCAGCAGCAAGTTCACAGGTGGGGACAGGCAATAGATaGGCAGTTGATAGCGGTTACCCAGCTCGTCATAGCATTCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PCAPAASSQVGTGNR*AVDSGYPARHSIHK Trigger: TTTGTGAATGCTATGACGAGCTGGGTAACCGCTATCAACTGCCCATCTATTGCCTGTCCCCACCTGTGAACTTGCTGCTGGAGCACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTGATAAAATGCAGATGTGTCTGTACACAGGGCCCCGCTGGGCTATGACCTTGAGCCTCACGTCCTaGCCTGTGGAGAGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: FIDKMQMCLYTGPRWAMTLSLTS*PVERRT Trigger: AGTGCGCCTCTCCACAGGCAAGGACGTGAGGCTCAA...GGTCATAGCCCAGCGGGGCCCTGTGTACAGACACATCTGCATTTTATCAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTGCTTCCAACCCTGAGCAGAAAACTGGAGTGAGCACAGCGTGGCACCAGGATGACGAAGTCTTTTaGAATCTTTGTTTCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AIASNPEQKTGVSTAWHQDDEVF*NLCFLE Trigger: CTCCAGGAAACAAAGATTCAAAAAGACTTCGTCATC...CTGGTGCCACGCTGTGCTCACTCCAGTTTTCTGCTCAGGGTTGGAAGCAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CCA 72 bp | CCTCACGTCCTTGCCTGTGGAGAGGCGCACTTTCAGTaGGAATTCACGGCGCACACTAGGGGTGGGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHVLACGEAHFQ*EFTAHTRGGLG Trigger: CCCGAGCCCACCCCTAGTGTGCGCCGTGAATTCCCACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 90 bp | CTCTGCCAGGATGGCTCAATGCCCTCCTGGCTGTGCAGCTGCCTCTaGAGTTGCCCCACCGTGTCAGGCAGGCTGGCATTGAGCCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: LCQDGSMPSWLCSCL*SCPTVSGRLALSLT Trigger: CGTGAGGCTCAATGCCAGCCTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCTGCACAGCCAGGAGGGCATTGAGCCATCCTGGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 90 bp | TGCAGCTGCCTCTTGAGTTGCCCCACCGTGTCAGGCAGGCTGGCATaGAGCCTCACGTCCTTGCCTGTGGAGAGGCGCACTTTCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSCLLSCPTVSGRLA*SLTSLPVERRTFSG Trigger: CCCACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGAGGCTCAATGCCAGCCTGCCTGACACGGTGGGGCAACTCAAGAGGCAGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 90 bp | AGTTGCCCCACCGTGTCAGGCAGGCTGGCATTGAGCCTCACGTCCTaGCCTGTGGAGAGGCGCACTTTCAGTGGGAATTCACGGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SCPTVSGRLALSLTS*PVERRTFSGNSRRT Trigger: TGTGCGCCGTGAATTCCCACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGAGGCTCAATGCCAGCCTGCCTGACACGGTGGGGCAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS GCA 72 bp | GGCATCCCAGATCTCCTTGCGGCCCTCAAAGGCAGGTaGTGTGTCCCAGAACTCATCTCGTTTGCTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GIPDLLAALKGR*CVPELISFAPQ Trigger: CTGCGGAGCAAACGAGATGAGTTCTGGGACACAGCACCTGCCTTTGAGGGCCGCAAGGAGATCTGGGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 72 bp | ACCGTGTCAGGCAGGCTGGCATTGAGCCTCACGTCCTaGCCTGTGGAGAGGCGCACTTTCAGTGGGAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSGRLALSLTS*PVERRTFSGNS Trigger: TGAATTCCCACTGAAAGTGCGCCTCTCCACAGGCAAGGACGTGAGGCTCAATGCCAGCCTGCCTGACACGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CCA 72 bp | CCAGCAGCAAGTTCACAGGTGGGGACAGGCAATAGATaGGCAGTTGATAGCGGTTACCCAGCTCGTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PAASSQVGTGNR*AVDSGYPARHS Trigger: GCTATGACGAGCTGGGTAACCGCTATCAACTGCCCATCTATTGCCTGTCCCCACCTGTGAACTTGCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 90 bp | CTCCAGCAGCAAGTTCACAGGTGGGGACAGGCAATAGATGGGCAGTaGATAGCGGTTACCCAGCTCGTCATAGCATTCACAAAGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQQQVHRWGQAIDGQ*IAVTQLVIAFTKSS Trigger: GGAACTCTTTGTGAATGCTATGACGAGCTGGGTAACCGCTATCAACTGCCCATCTATTGCCTGTCCCCACCTGTGAACTTGCTGCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 90 bp | GGGTGGTGGGGGCTGGTTGATGATGACCTGGATGACGAAGTCTTTTaGAATCTTTGTTTCCTGGAGCCTTGTGCGGTCTGTAAGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GWWGLVDDDLDDEVF*NLCFLEPCAVCKQL Trigger: AAGCTGCTTACAGACCGCACAAGGCTCCAGGAAACAAAGATTCAAAAAGACTTCGTCATCCAGGTCATCATCAACCAGCCCCCACCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||
| CDS CAA 72 bp | GGGCTGGTTGATGATGACCTGGATGACGAAGTCTTTTaGAATCTTTGTTTCCTGGAGCCTTGTGCGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLVDDDLDDEVF*NLCFLEPCAVC Trigger: ACAGACCGCACAAGGCTCCAGGAAACAAAGATTCAAAAAGACTTCGTCATCCAGGTCATCATCAACCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026170.3 |
||