Pregenerated sensors for UBR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041712Ensembl transcript IDs: ENSMUST00000046404.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCAGCTCAGGAGACCCCGAGGCTGTGGGCACCGGGGGTCTGCCTaGGCCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: PQLRRPRGCGHRGSA*ALSRPAQCTQASPA Trigger: TGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 90 bp | AAATCCTCAGCTCAGGAGACCCCGAGGCTGTGGGCACCGGGGGTCTaGCTGAGCCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCC | + |
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Preference number: 1 (lower is better) Translates to: KSSAQETPRLWAPGV*LSPIQASSVHTGFA Trigger: GGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 90 bp | GCAACTCTCAAATTCAAATCCTCAGCTCAGGAGACCCCGAGGCTGTaGGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCCAGCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: ATLKFKSSAQETPRL*APGVCLSPIQASSV Trigger: CACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTTGAATTTGAGAGTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 90 bp | GCTGAGAGACCAGTAGAAACCCTGCAGCTACTTAAGGAGAAGGCCTaGGGCCACGGGAGGATGGAAAGGGGACCAAGTGTGACACAGGTC | + |
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Preference number: 1 (lower is better) Translates to: AERPVETLQLLKEKA*GHGRMERGPSVTQV Trigger: GACCTGTGTCACACTTGGTCCCCTTTCCATCCTCCCGTGGCCTCAGGCCTTCTCCTTAAGTAGCTGCAGGGTTTCTACTGGTCTCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 90 bp | GAAAAGTCCCATCTCTTCAAGCCACGATCGAATCTCAGAAAGCGCTaGGCAGACTGGCAGAGCGGGCTTGAGGAAGCTTTGACCCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: EKSHLFKPRSNLRKR*ADWQSGLEEALTQG Trigger: GCCTTGGGTCAAAGCTTCCTCAAGCCCGCTCTGCCAGTCTGCTCAGCGCTTTCTGAGATTCGATCGTGGCTTGAAGAGATGGGACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 90 bp | CCTTTCTTATGCAAGCCCTTCAACATAGGCTGGCTGTATTTTTGCTaGTCACTGACACTGCTGCTAAGCCTTGGTTCTGACCTATCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PFLCKPFNIGWLYFC*SLTLLLSLGSDLSG Trigger: CCCTGATAGGTCAGAACCAAGGCTTAGCAGCAGTGTCAGTGAGCAGCAAAAATACAGCCAGCCTATGTTGAAGGGCTTGCATAAGAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 90 bp | AAGAGACCCTGCAAGACCCAGAAGACCCAGAGGGCAATAGCTCTGTaGGCGTACATATGGAAGTCATGGAACAAACTGCTAGAAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KRPCKTQKTQRAIAL*AYIWKSWNKLLEKK Trigger: CTTCTTTTCTAGCAGTTTGTTCCATGACTTCCATATGTACGCTCACAGAGCTATTGCCCTCTGGGTCTTCTGGGTCTTGCAGGGTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 90 bp | GCACTTTTACAAAGACTCAATATGTATATAGCTGAGGGCTTTGGCTaGAATCCTCCATCTTCTAGGGCTGTCACTGCCCCACTTACTACC | + |
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Preference number: 1 (lower is better) Translates to: ALLQRLNMYIAEGFG*NPPSSRAVTAPLTT Trigger: GGTAGTAAGTGGGGCAGTGACAGCCCTAGAAGATGGAGGATTCCAGCCAAAGCCCTCAGCTATATACATATTGAGTCTTTGTAAAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 90 bp | GACCTATCAGGGGCAGACAGGAACTTGGTGGTTAAATCTGACATCTaGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: DLSGADRNLVVKSDI*EERSFEDVLVHRKC Trigger: GCACTTTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCTGTCTGCCCCTGATAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 90 bp | TGGTGGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTaGTGGTACATAGAAAGTGCAACTCTCAAATTCAAATCCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: WWLNLTSGKREVLRM*WYIESATLKFKSSA Trigger: AGCTGAGGATTTGAATTTGAGAGTTGCACTTTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 90 bp | TGGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTaGTACATAGAAAGTGCAACTCTCAAATTCAAATCCTCAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: WLNLTSGKREVLRMC*YIESATLKFKSSAQ Trigger: CTGAGCTGAGGATTTGAATTTGAGAGTTGCACTTTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCGGGCTTGAGGAAGCTTTGACCCAAGGCACCGTGATCATGGGGCAGAGGCTGACGTCTGTGGAATaGGCTGTCACAGAGGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: QSGLEEALTQGTVIMGQRLTSVE*AVTEAA Trigger: AGCGGCCTCTGTGACAGCTCATTCCACAGACGTCAG...CCTCTGCCCCATGATCACGGTGCCTTGGGTCAAAGCTTCCTCAAGCCCGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCCAGCTCAGTGCACACAGGCTTATACAACAATCCATaGAGACCCTCCGAGCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: WAPGVCLSPIQASSVHTGLYNNP*RPSEPS Trigger: TGACGGCTCGGAGGGTCTTCATGGATTGTTGTATAA...GCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCTGCTCACTGACACTGCTGCTAAGCCTTGGTTCTGACCTATCAGGGGCAGAGACCCCGAGGCTGTaGGCACCGGGGGTCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: FCCSLTLLLSLGSDLSGAETPRL*APGVCL Trigger: CAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTC...TGCCCCTGATAGGTCAGAACCAAGGCTTAGCAGCAGTGTCAGTGAGCAGCAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTGCAGCGGGAAGAACCTGCTGAGGGCTTTGGCTaGAATCCTCCATCTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PYPGQLSAHRLRLQREEPAEGFG*NPPSSR Trigger: CCTAGAAGATGGAGGATTCCAGCCAAAGCCCTCAGC...AGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCCGAGCCGTCAGGAGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATAACAGGAAGAGACCCTaGAAGACCCAGAAGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TLRAVRREWLCALLQRLNNRKRP*KTQKTQ Trigger: CTGGGTCTTCTGGGTCTTGCAGGGTCTCTTCCTGTT...ATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCTCCTGACGGCTCGGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCACTGACACTGCTGCTAAGCCTTGGTTCTGACCTATCAGGGGCAGACAGGATTCCCTGGAAGCCCTaGGAGCAGTACAGTACTAAC | + |
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Preference number: 2 (lower is better) Translates to: CSLTLLLSLGSDLSGADRIPWKP*EQYSTN Trigger: GTTAGTACTGTACTGCTCCCAGGGCTTCCAGGGAAT...CCTGTCTGCCCCTGATAGGTCAGAACCAAGGCTTAGCAGCAGTGTCAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCGGGCTTGAGGAAGCTTTGACCCAAGGCACCGTGATCATGGGGCAGAGGAAACTTCTCAAACCATaGACAGAAAGAAGTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QSGLEEALTQGTVIMGQRKLLKP*TERSLG Trigger: CCCAAGACTTCTTTCTGTTCATGGTTTGAGAAGTTT...CCTCTGCCCCATGATCACGGTGCCTTGGGTCAAAGCTTCCTCAAGCCCGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTGCAGCGGGAAGAACCTTACATATGGAAGTCATaGAACAAACTGCTAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PYPGQLSAHRLRLQREEPYIWKS*NKLLEK Trigger: CTTTTCTAGCAGTTTGTTCCATGACTTCCATATGTA...AGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAACCTGGGCAGGAGAGCTaGCGTCTGTGGAATGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LNLTSGKREVLRMCWYIEPGQES*RLWNEL Trigger: CAGCTCATTCCACAGACGTCAGCTCTCCTGCCCAGG...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATATGTATATAGCTGAGGGCTTGCTTCCTCAATCCTaGCTTAAGCCAACCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: REWLCALLQRLNMYIAEGLLPQS*LKPTSH Trigger: GTGGGAGGTTGGCTTAAGGCAGGATTGAGGAAGCAA...GCCCTCAGCTATATACATATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCATGGAACAAACTGCTAGAAAAGAAGCTAATTTGCTTTCACAAGATCAACTTAAGGAGAAGGCCTaGGGCCACGGGAGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: EVMEQTARKEANLLSQDQLKEKA*GHGRME Trigger: TTCCATCCTCCCGTGGCCTCAGGCCTTCTCCTTAAG...TTGATCTTGTGAAAGCAAATTAGCTTCTTTTCTAGCAGTTTGTTCCATGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATATGTATATAGCTGAGGGCTTCAGAACAAAGGCTTaGTTCCTCAATCCTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: REWLCALLQRLNMYIAEGFRTKA*FLNPAL Trigger: TAAGGCAGGATTGAGGAAGCAAGCCTTTGTTCTGAA...GCCCTCAGCTATATACATATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAAAGGAGGGAGTGGCTGTaGGCACTTTTACAAAGACTC | + |
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Preference number: 2 (lower is better) Translates to: LNLTSGKREVLRMCWYIERREWL*ALLQRL Trigger: GAGTCTTTGTAAAAGTGCGCACAGCCACTCCCTCCT...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CAA 90 bp | ATGAAATTTCACTTCAAACTAATCAGCGAAATTCAGAACAAAGGCTaGCTTCCTCAATCCTGCCTTAAGCCAACCTCCCACAGACGACAT | + |
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Preference number: 2 (lower is better) Translates to: MKFHFKLISEIQNKG*LPQSCLKPTSHRRH Trigger: ATGTCGTCTGTGGGAGGTTGGCTTAAGGCAGGATTGAGGAAGCAAGCCTTTGTTCTGAATTTCGCTGATTAGTTTGAAGTGAAATTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAAAGACTTCACACCATCTaGAAGACTTCTCTCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: LNLTSGKREVLRMCWYIERLHTI*KTSLKH Trigger: GTGTTTGAGAGAAGTCTTTCAGATGGTGTGAAGTCT...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAACCACTTAGGTCTTTGTaGATCAAAAGATGTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LNLTSGKREVLRMCWYIEPLRSL*IKRCFP Trigger: TGGAAAACATCTTTTGATCCACAAAGACCTAAGTGG...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 72 bp | AGGAGACCCCGAGGCTGTGGGCACCGGGGGTCTGCCTaGGCCCTATCCAGGCCAGCTCAGTGCACACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: RRPRGCGHRGSA*ALSRPAQCTQA Trigger: AGCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | GCTCAGGAGACCCCGAGGCTGTGGGCACCGGGGGTCTaGCTGAGCCCTATCCAGGCCAGCTCAGTGCACACA | + |
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Preference number: 3 (lower is better) Translates to: AQETPRLWAPGV*LSPIQASSVHT Trigger: TGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCTGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | AAATTCAAATCCTCAGCTCAGGAGACCCCGAGGCTGTaGGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: KFKSSAQETPRL*APGVCLSPIQA Trigger: GGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTTGAATTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | CCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTaGAGCGGGAAGAACCTTGCAGCTCCACATAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PIQASSVHTGFA*SGKNLAAPHSS Trigger: ACTGCTATGTGGAGCTGCAAGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | TGCTCCCCAGAGGTTCGGGCTAACAGGAAGAGACCCTaGAAGACCCAGAAGACCCAGAGGGCAATAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CSPEVRANRKRP*KTQKTQRAIAL Trigger: CAGAGCTATTGCCCTCTGGGTCTTCTGGGTCTTGCAGGGTCTCTTCCTGTTAGCCCGAACCTCTGGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 72 bp | ACAGAAAGAAGTCTTGGGCATCCTGGGCAGGAGAGCTaGCGTCTGTGGAATGAGCTGTCACAGAGGCCGCTT | + |
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Preference number: 3 (lower is better) Translates to: TERSLGHPGQES*RLWNELSQRPL Trigger: AAGCGGCCTCTGTGACAGCTCATTCCACAGACGTCAGCTCTCCTGCCCAGGATGCCCAAGACTTCTTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 72 bp | CATCTCTTCAAGCCACGATCGAATCTCAGAAAGCGCTaGGCAGACTGGCAGAGCGGGCTTGAGGAAGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: HLFKPRSNLRKR*ADWQSGLEEAL Trigger: CAAAGCTTCCTCAAGCCCGCTCTGCCAGTCTGCTCAGCGCTTTCTGAGATTCGATCGTGGCTTGAAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 72 bp | ACTTCTCTCAAACACAGGACTTTATACAACAATCCATaGAGACCCTCCGAGCCGTCAGGAGGGAGTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TSLKHRTLYNNP*RPSEPSGGSGC Trigger: ACAGCCACTCCCTCCTGACGGCTCGGAGGGTCTTCATGGATTGTTGTATAAAGTCCTGTGTTTGAGAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | TGCAAGCCCTTCAACATAGGCTGGCTGTATTTTTGCTaGTCACTGACACTGCTGCTAAGCCTTGGTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: CKPFNIGWLYFC*SLTLLLSLGSD Trigger: GTCAGAACCAAGGCTTAGCAGCAGTGTCAGTGAGCAGCAAAAATACAGCCAGCCTATGTTGAAGGGCTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | CTTCTAGGGCTGTCACTGCCCCACTTACTACCACTATaGTCAGTCAGTATCCTTGCCTTCAGCAGATTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LLGLSLPHLLPL*SVSILAFSRFK Trigger: CTTGAATCTGCTGAAGGCAAGGATACTGACTGACCATAGTGGTAGTAAGTGGGGCAGTGACAGCCCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR TCA 72 bp | TGCAAGACCCAGAAGACCCAGAGGGCAATAGCTCTGTaGGCGTACATATGGAAGTCATGGAACAAACTGCTA | + |
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Preference number: 3 (lower is better) Translates to: CKTQKTQRAIAL*AYIWKSWNKLL Trigger: TAGCAGTTTGTTCCATGACTTCCATATGTACGCTCACAGAGCTATTGCCCTCTGGGTCTTCTGGGTCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | ATGAAGACCCTCCGAGCCGTCAGGAGGGAGTGGCTGTaGGCACTTTTACAAAGACTCAATATGTATATAGCT | + |
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Preference number: 3 (lower is better) Translates to: MKTLRAVRREWL*ALLQRLNMYIA Trigger: AGCTATATACATATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCTCCTGACGGCTCGGAGGGTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | GTGACAAGGAACTCGAGTATTCATGCATACAACTGCTaGCCACACACAAAAATCCCCACCAACATGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VTRNSSIHAYNC*PHTKIPTNMWP Trigger: AGGCCACATGTTGGTGGGGATTTTTGTGTGTGGGCAGCAGTTGTATGCATGAATACTCGAGTTCCTTGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | GCCTTGGTTCTGACCTATCAGGGGCAGACAGGAACTTaGTGGTTAAATCTGACATCTGGGAAGAGAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: ALVLTYQGQTGT*WLNLTSGKREV Trigger: AACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCTGTCTGCCCCTGATAGGTCAGAACCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | AGGCTACTTCATCGTGACAAGGAACTCGAGTATTCATaGATACAACTGCTGCCCACACACAAAAATCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: RLLHRDKELEYS*IQLLPTHKNPH Trigger: GTGGGGATTTTTGTGTGTGGGCAGCAGTTGTATGCATGAATACTCGAGTTCCTTGTCACGATGAAGTAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | ACCTTGTTCCTCTGGAGGGTGCCACTTAGGTCTTTGTaGATCAAAAGATGTTTTCCACATAGACTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TLFLWRVPLRSL*IKRCFPHRLRE Trigger: CTCCCTCAGTCTATGTGGAAAACATCTTTTGATCCACAAAGACCTAAGTGGCACCCTCCAGAGGAACAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | GGGGCAGACAGGAACTTGGTGGTTAAATCTGACATCTaGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: GADRNLVVKSDI*EERSFEDVLVH Trigger: ATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCTGTCTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | TTGGTTCTGACCTATCAGGGGCAGACAGGAACTTGGTaGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: LVLTYQGQTGTW*LNLTSGKREVL Trigger: CAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCTGTCTGCCCCTGATAGGTCAGAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR-3UTR CAA 90 bp | CTCGAGTATTCATGCATACAACTGCTGCCCACACACAAAAATCCCCACCAACATGTGCCACTTAGGTCTTaGTGGATCAAAAGATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LEYSCIQLLPTHKNPHQHVPLRS*WIKRCF Trigger: AAAACATCTTTTGATCCACAAAGACCTAAGTGGCAC...ATGTTGGTGGGGATTTTTGTGTGTGGGCAGCAGTTGTATGCATGAATACTCGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CCA 72 bp | CTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTaGTACATAGAAAGTGCAACTCTCAAATTCAAATCC | + |
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Preference number: 3 (lower is better) Translates to: LTSGKREVLRMC*YIESATLKFKS Trigger: GGATTTGAATTTGAGAGTTGCACTTTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR GCA 72 bp | AATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTaGTGGTACATAGAAAGTGCAACTCTCAAATTCAAA | + |
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Preference number: 3 (lower is better) Translates to: NLTSGKREVLRM*WYIESATLKFK Trigger: TTTGAATTTGAGAGTTGCACTTTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR TCA 90 bp | GGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCCAGCTCAGTGCACACAGGCTTTGCTTGTCTCCCCACTaGGCCCTGCGAGTAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTGGLPEPYPGQLSAHRLCLSPH*ALRVGA Trigger: TGCTCCTACTCGCAGGGCTCAGTGGGGAGACAAGCA...AAGCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR GCA 90 bp | GGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCTTCTCCCTCTGGCGTaGAGGTGCTGCAGGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GTGGLPEPYPGQLSAHRLLLPLA*RCCRRT Trigger: TGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAG...AAGCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR TCA 90 bp | TGGGCACCGGGGGTCTGCCTGAGCCCTATCCAGGCCAGCTCAGTGCACACAGGCCAGCTTTCACCTCGTTaGCAGAATCCCTGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAPGVCLSPIQASSVHTGQLSPR*QNPCHA Trigger: AGCATGGCAGGGATTCTGTCAACGAGGTGAAAGCTG...GCCTGTGTGCACTGAGCTGGCCTGGATAGGGCTCAGGCAGACCCCCGGTGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR TCA 90 bp | CCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTGCAGCGGGAAGAACCTCAGCAGATATCCTGGTaGCTGCCAACTGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PYPGQLSAHRLRLQREEPQQISW*LPTGQH Trigger: ATGCTGCCCAGTTGGCAGTCACCAGGATATCTGCTG...AGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | CAGAGCGGGCTTGAGGAAGCTTTGACCCAAGGCACCGTGATCATGGGGCAGAGGTGGCACACCATCTCCTaGAAATCCCCACTCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGLEEALTQGTVIMGQRWHTIS*KSPLSG Trigger: CCCTGAGAGTGGGGATTTCCAGGAGATGGTGTGCCA...CCTCTGCCCCATGATCACGGTGCCTTGGGTCAAAGCTTCCTCAAGCCCGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CAA 72 bp | CAGTGCACACAGGCTTCGCCTGCAGCGGGAAGAACCTaGCAGCTCCACATAGCAGTCTTCCCAGGATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCTQASPAAGRT*QLHIAVFPGSV Trigger: GACAGATCCTGGGAAGACTGCTATGTGGAGCTGCAAGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | CCCTATCCAGGCCAGCTCAGTGCACACAGGCTTCGCCTGCAGCGGGAAGAACCTATGAGCTCCACTTGCTaGACTCTATTCATGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PYPGQLSAHRLRLQREEPMSSTC*TLFMLL Trigger: TAGCAGCATGAATAGAGTCCAGCAAGTGGAGCTCAT...AGGTTCTTCCCGCTGCAGGCGAAGCCTGTGTGCACTGAGCTGGCCTGGATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | TGCAACTCTCAAATTCAAATCCTCAGCTCAGGAGACCCCGAGGCTGTGGGCACCCGCCTCATACAAGCCTaGCACACCATCTCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CNSQIQILSSGDPEAVGTRLIQA*HTISWK Trigger: TTTCCAGGAGATGGTGTGCCAGGCTTGTATGAGGCG...GGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTTGAATTTGAGAGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACTTGGTGGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGGGGCTCTTCTCCCTCTaGCGTGCAGGTGCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNLVVKSDIWEERSFEDVGLFSL*RAGAAG Trigger: GCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCC...CACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | TGCAACTCTCAAATTCAAATCCTCAGCTCAGGAGACCCCGAGGCTGTGGGCACCCTTCTATCAGTTGCCTaGTCGTTCTTGCCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNSQIQILSSGDPEAVGTLLSVA*SFLPLF Trigger: GAACAAAGGCAAGAACGACCAGGCAACTGATAGAAG...GGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTTGAATTTGAGAGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR GCA 90 bp | TTTTGCTGCTCACTGACACTGCTGCTAAGCCTTGGTTCTGACCTATCAGGGGCACAGATGAGCTCCACTTaGTGGACTCTATTCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCCSLTLLLSLGSDLSGAQMSST*WTLFML Trigger: CAGCATGAATAGAGTCCAGCAAGTGGAGCTCATCTG...TGCCCCTGATAGGTCAGAACCAAGGCTTAGCAGCAGTGTCAGTGAGCAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCGAGCCGTCAGGAGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATTCAAGGGCCAATAGGTaGCAGCATCTTTCTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLRAVRREWLCALLQRLNSRANR*QHLSLQ Trigger: TTGTAAAGAAAGATGCTGCCACCTATTGGCCCTTGA...ATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCTCCTGACGGCTCGGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| 3UTR CAA 72 bp | AGCCTTGGTTCTGACCTATCAGGGGCAGACAGGAACTaGGTGGTTAAATCTGACATCTGGGAAGAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGSDLSGADRN*VVKSDIWEERS Trigger: ACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCTGTCTGCCCCTGATAGGTCAGAACCAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| 3UTR CAA 72 bp | CTTATGCAAGCCCTTCAACATAGGCTGGCTGTATTTTaGCTGCTCACTGACACTGCTGCTAAGCCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMQALQHRLAVF*LLTDTAAKPWF Trigger: GAACCAAGGCTTAGCAGCAGTGTCAGTGAGCAGCAAAAATACAGCCAGCCTATGTTGAAGGGCTTGCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATATGTATATAGCTGAGGGCTTCAGGCCATTATCTTaGGGAGCTCCATTTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: REWLCALLQRLNMYIAEGFRPLS*GAPFSG Trigger: GCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAA...GCCCTCAGCTATATACATATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR GCA 90 bp | CTCGAGTATTCATGCATACAACTGCTGCCCACACACAAAAATCCCCACCAACATTTGCCTGGTCGTTCTTaGCTTTGTTCTCATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEYSCIQLLPTHKNPHQHLPGRS*LCSHKP Trigger: TGGCTTATGAGAACAAAGGCAAGAACGACCAGGCAA...ATGTTGGTGGGGATTTTTGTGTGTGGGCAGCAGTTGTATGCATGAATACTCGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR GCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAATGGCACCAAGATGCCTaGCATGGAACCAGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNLTSGKREVLRMCWYIEWHQDA*HGTSLH Trigger: GTGAAGACTGGTTCCATGGCAGGCATCTTGGTGCCA...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR TCA 90 bp | GCGTACATATGGAAGTCATGGAACAAACTGCTAGAAAAGAAGCTAATTTGCTTTTTGGCTTGGAGTTCCTaGAGTCTGCAGCTGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYIWKSWNKLLEKKLICFLAWSS*SLQLDC Trigger: ACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAA...AAAGCAAATTAGCTTCTTTTCTAGCAGTTTGTTCCATGACTTCCATATGTACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR GCA 90 bp | GAAGTCATGGAACAAACTGCTAGAAAAGAAGCTAATTTGCTTTCACAAGATCAAGGAGTTCCTGAAGTCTaGAGCTGGACTGTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVMEQTARKEANLLSQDQGVPEV*SWTVAQ Trigger: CTGAGCCACAGTCCAGCTGCAGACTTCAGGAACTCC...TTGATCTTGTGAAAGCAAATTAGCTTCTTTTCTAGCAGTTTGTTCCATGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR GCA 90 bp | AGGAACTTGGTGGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCATGACATTCGTAACTaGAAGCTAGACAAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLVVKSDIWEERSFEDVHDIRN*KLDKSL Trigger: CAGGGATTTGTCTAGCTTGCAGTTACGAATGTCATG...CACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | CTTAAAAAGACTTCACACCATCTGAAAGACTTCTCTCAAACACAGGACTTTATACCAAGATGCCTGCCATaGAACCAGTCTTCACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LKKTSHHLKDFSQTQDFIPRCLP*NQSSQT Trigger: GGTCTGTGAAGACTGGTTCCATGGCAGGCATCTTGG...TATAAAGTCCTGTGTTTGAGAGAAGTCTTTCAGATGGTGTGAAGTCTTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAAACTTCTCAAACCATGAACAGAAAGAAGTCTTGGGCATCCTGGGCAGGTCTTCAAAGAACTGCTaGATGTCTTCTCTCTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSNFSNHEQKEVLGILGRSSKNC*MSSLLT Trigger: TGTTAAGAGAGAAGACATTCAGCAGTTCTTTGAAGA...CCTGCCCAGGATGCCCAAGACTTCTTTCTGTTCATGGTTTGAGAAGTTTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAACTGTATCATCTCATCTaGAACCTCATCTTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LNLTSGKREVLRMCWYIELYHLI*NLIFRI Trigger: GATCCTGAAGATGAGGTTCCAGATGAGATGATACAG...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CCA 90 bp | TTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGCTGGTACATAGAATCTGCAGCTGGACTGTaGCTCAGTTTTGATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLTSGKREVLRMCWYIESAAGL*LSFDIF Trigger: GAAAATATCAAAACTGAGCCACAGTCCAGCTGCAGA...TTCTATGTACCAGCACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CAA 72 bp | CTGCATAAAACATGCATTAATATCAACTGCCACATGTaGGCCCAAACCATCTCTACGAGAATAGTAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHKTCININCHM*AQTISTRIVRK Trigger: TTTTCTTACTATTCTCGTAGAGATGGTTTGGGCCAACATGTGGCAGTTGATATTAATGCATGTTTTATGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR TCA 90 bp | CTTAAAAAGACTTCACACCATCTGAAAGACTTCTCTCAAACACAGGACTTTATAATTTTCATACAGTCTTaGCAGGTGCATAGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKKTSHHLKDFSQTQDFIIFIQS*QVHSLL Trigger: CAGCAAACTATGCACCTGTCAAGACTGTATGAAAAT...TATAAAGTCCTGTGTTTGAGAGAAGTCTTTCAGATGGTGTGAAGTCTTTTTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| 3UTR CAA 72 bp | GAAGTCATGGAACAAACTGCTAGAAAAGAAGCTAATTaGCTTTCACAAGATCAAATCAAACTTCTCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: EVMEQTARKEAN*LSQDQIKLLKP Trigger: TGGTTTGAGAAGTTTGATTTGATCTTGTGAAAGCAAATTAGCTTCTTTTCTAGCAGTTTGTTCCATGACTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | GTCTCCCCACTGAGCCCTGCGAGTAGGAGCACTTCTCCGAGTCGCTaGCGCCCAGGACGGCGCACGCCTCATTCTCCAACTCCTCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSPLSPASRSTSPSR*RPGRRTPHSPTPRL Trigger: AAGACGAGGAGTTGGAGAATGAGGCGTGCGCCGTCCTGGGCGGCAGCGACTCGGAGAAGTGCTCCTACTCGCAGGGCTCAGTGGGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | CTAGACAAATCCCTGCGGGCTCTTCTCCCTCTGGCGTGCAGGTGCTaGAGGCGTACAGTGCTTGTCTCCCCACTGAGCCCTGCGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDKSLRALLPLACRC*RRTVLVSPLSPASR Trigger: CCTACTCGCAGGGCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGATTTGTCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | AAGCTAGACAAATCCCTGCGGGCTCTTCTCCCTCTGGCGTGCAGGTaGTGCAGGCGTACAGTGCTTGTCTCCCCACTGAGCCCTGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLDKSLRALLPLACR*CRRTVLVSPLSPAS Trigger: ACTCGCAGGGCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGATTTGTCTAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | AACTGCAAGCTAGACAAATCCCTGCGGGCTCTTCTCCCTCTGGCGTaGAGGTGCTGCAGGCGTACAGTGCTTGTCTCCCCACTGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NCKLDKSLRALLPLA*RCCRRTVLVSPLSP Trigger: AGGGCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGATTTGTCTAGCTTGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | TGGAGGTCAGACTCAGAACTAGAGCTGCTGCAGGGCTCGTTCTTCTaGTCAGCTTTCACCTCGTTGACAGAATCCCTGCCATGCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRSDSELELLQGSFF*SAFTSLTESLPCSG Trigger: TCCCGAGCATGGCAGGGATTCTGTCAACGAGGTGAAAGCTGAGCAGAAGAACGAGCCCTGCAGCAGCTCTAGTTCTGAGTCTGACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 90 bp | CACAAGAAAGAACAGCGCCTCATACAAGCCTGGCACACCATCTCCTaGAAATCCCCACTCTCAGGGGGAATGGCACCAAGATGCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKKEQRLIQAWHTIS*KSPLSGGMAPRCLP Trigger: TGGCAGGCATCTTGGTGCCATTCCCCCTGAGAGTGGGGATTTCCAGGAGATGGTGTGCCAGGCTTGTATGAGGCGCTGTTCTTTCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | TCGTTCTTCTGCTCAGCTTTCACCTCGTTGACAGAATCCCTGCCATaGTCGGGAGCATCCTCTTTCAGGCCATTATCTTGGGGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFFCSAFTSLTESLP*SGASSFRPLSWGAP Trigger: TGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGGCAGGGATTCTGTCAACGAGGTGAAAGCTGAGCAGAAGAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS-3UTR CAA 90 bp | ACCCTCCGAGCCGTCAGGAGGGAGTGGCTGTGCGCACTTTTACAAAGACTCAATACAGATGAGCTCCACTaGCTGGACTCTATTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLRAVRREWLCALLQRLNTDELH*LDSIHA Trigger: AGCATGAATAGAGTCCAGCAAGTGGAGCTCATCTGT...ATTGAGTCTTTGTAAAAGTGCGCACAGCCACTCCCTCCTGACGGCTCGGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 90 bp | GAATCCCTGCCATGCTCGGGAGCATCCTCTTTCAGGCCATTATCTTaGGGAGCTCCATTTTCAGGCTTGCTAACATCTTCATCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ESLPCSGASSFRPLS*GAPFSGLLTSSSPM Trigger: CATGGGAGATGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGGCAGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 90 bp | AGTTCAAGGGCCAATAGGTGGCAGCATCTTTCTTTACAAACTGCTTaGCTTGGAGTTCCTGAAGTCTGCAGCTGGACTGTGGCTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRANRWQHLSLQTA*LGVPEVCSWTVAQF Trigger: AAACTGAGCCACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGCTGCCACCTATTGGCCCTTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 90 bp | CTTGACAGGTGCATAGTTTGCTGCGCCAGTTCAAGGGCCAATAGGTaGCAGCATCTTTCTTTACAAACTGCTTGGCTTGGAGTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LDRCIVCCASSRANR*QHLSLQTAWLGVPE Trigger: TTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGCTGCCACCTATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | TTGTGTATAGTTCAAACAGTTTATGGCTTCCATGACATTCGTAACTaGAAGCTAGACAAATCCCTGCGGGCTCTTCTCCCTCTGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LCIVQTVYGFHDIRN*KLDKSLRALLPLAC Trigger: GCACGCCAGAGGGAGAAGAGCCCGCAGGGATTTGTCTAGCTTGCAGTTACGAATGTCATGGAAGCCATAAACTGTTTGAACTATACACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | ACAGGACGTCTAGTTCTCCATACATTTTCATACAGTCTTGACAGGTaGATAGTTTGCTGCGCCAGTTCAAGGGCCAATAGGTGGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGRLVLHTFSYSLDR*IVCCASSRANRWQH Trigger: ATGCTGCCACCTATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATGGAGAACTAGACGTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR CAA 90 bp | TGCAACTCTCAAATTCAAATCCTCAGCTCAGGAGACCCCGAGGCTGTGGGCACCCTCGCCTTCTCTTTTTaGATTGAAACTCTTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CNSQIQILSSGDPEAVGTLAFSF*IETLQR Trigger: TCTTTGAAGAGTTTCAATCAAAAAAGAGAAGGCGAG...GGTGCCCACAGCCTCGGGGTCTCCTGAGCTGAGGATTTGAATTTGAGAGTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS GCA 90 bp | GGGTGTCCATTAAAGGGTCCCTTCTATCAGTTGCCTGGTCGTTCTTaGCTTTGTTCTCATAAGCCAGAACTGTATCACATTCATCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCPLKGPFYQLPGRS*LCSHKPELYHIHLS Trigger: TGACAGATGAATGTGATACAGTTCTGGCTTATGAGAACAAAGGCAAGAACGACCAGGCAACTGATAGAAGGGACCCTTTAATGGACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 90 bp | CTAGTTCTCCATACATTTTCATACAGTCTTGACAGGTGCATAGTTTaGTGCGCCAGTTCAAGGGCCAATAGGTGGCAGCATCTTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVLHTFSYSLDRCIV*CASSRANRWQHLSL Trigger: TAAAGAAAGATGCTGCCACCTATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATGGAGAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACTTGGTGGTTAAATCTGACATCTGGGAAGAGAGAAGTTTTGAGGATGTGTCAGTCTTCAAGTCATaGTATTCACAGATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNLVVKSDIWEERSFEDVSVFKS*YSQMSS Trigger: GGAGCTCATCTGTGAATACAATGACTTGAAGACTGA...CACATCCTCAAAACTTCTCTCTTCCCAGATGTCAGATTTAACCACCAAGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS GCA 72 bp | CTGAGCCCTGCGAGTAGGAGCACTTCTCCGAGTCGCTaGCGCCCAGGACGGCGCACGCCTCATTCTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LSPASRSTSPSR*RPGRRTPHSPT Trigger: AGTTGGAGAATGAGGCGTGCGCCGTCCTGGGCGGCAGCGACTCGGAGAAGTGCTCCTACTCGCAGGGCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS GCA 72 bp | TCCCTGCGGGCTCTTCTCCCTCTGGCGTGCAGGTGCTaGAGGCGTACAGTGCTTGTCTCCCCACTGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRALLPLACRC*RRTVLVSPLSP Trigger: AGGGCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS GCA 72 bp | AAATCCCTGCGGGCTCTTCTCCCTCTGGCGTGCAGGTaGTGCAGGCGTACAGTGCTTGTCTCCCCACTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSLRALLPLACR*CRRTVLVSPLS Trigger: GCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
||
| CDS GCA 72 bp | CTAGACAAATCCCTGCGGGCTCTTCTCCCTCTGGCGTaGAGGTGCTGCAGGCGTACAGTGCTTGTCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LDKSLRALLPLA*RCCRRTVLVSP Trigger: TGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAGCCCGCAGGGATTTGTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 72 bp | GAACAGCGCCTCATACAAGCCTGGCACACCATCTCCTaGAAATCCCCACTCTCAGGGGGAATGGCACCAAGA | + |
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Preference number: 6 (lower is better) Translates to: EQRLIQAWHTIS*KSPLSGGMAPR Trigger: TCTTGGTGCCATTCCCCCTGAGAGTGGGGATTTCCAGGAGATGGTGTGCCAGGCTTGTATGAGGCGCTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 72 bp | ACACCATCTCCTGGAAATCCCCACTCTCAGGGGGAATaGCACCAAGATGCCTGCCATGGAACCAGTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: TPSPGNPHSQGE*HQDACHGTSLH Trigger: GTGAAGACTGGTTCCATGGCAGGCATCTTGGTGCCATTCCCCCTGAGAGTGGGGATTTCCAGGAGATGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS TCA 72 bp | TTGGCAGCAGCCCATCATCTTCAGCAGATATCCTGGTaGCTGCCAACTGGGCAGCATAAGCCCACAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LAAAHHLQQISW*LPTGQHKPTRK Trigger: CTTTCTTGTGGGCTTATGCTGCCCAGTTGGCAGTCACCAGGATATCTGCTGAAGATGATGGGCTGCTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 72 bp | TGCTCAGCTTTCACCTCGTTGACAGAATCCCTGCCATaGTCGGGAGCATCCTCTTTCAGGCCATTATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSAFTSLTESLP*SGASSFRPLSW Trigger: CCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGGCAGGGATTCTGTCAACGAGGTGAAAGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 72 bp | GCCATGCTCGGGAGCATCCTCTTTCAGGCCATTATCTaGGGGAGCTCCATTTTCAGGCTTGCTAACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: AMLGSILFQAII*GSSIFRLANIF Trigger: GAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 90 bp | GCATCCTCTTTCAGGCCATTATCTTGGGGAGCTCCATTTTCAGGCTaGCTAACATCTTCATCTCCCATGCCAGTAGCATTTGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASSFRPLSWGAPFSG*LTSSSPMPVAFGSS Trigger: GCTGCTGCCAAATGCTACTGGCATGGGAGATGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 90 bp | AGAATCCCTGCCATGCTCGGGAGCATCCTCTTTCAGGCCATTATCTaGGGGAGCTCCATTTTCAGGCTTGCTAACATCTTCATCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RIPAMLGSILFQAII*GSSIFRLANIFISH Trigger: ATGGGAGATGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGGCAGGGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 72 bp | CCATGCTCGGGAGCATCCTCTTTCAGGCCATTATCTTaGGGAGCTCCATTTTCAGGCTTGCTAACATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PCSGASSFRPLS*GAPFSGLLTSS Trigger: TGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAAAGAGGATGCTCCCGAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 72 bp | ATAGGTGGCAGCATCTTTCTTTACAAACTGCTTGGCTaGGAGTTCCTGAAGTCTGCAGCTGGACTGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: IGGSIFLYKLLG*EFLKSAAGLWL Trigger: GAGCCACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGCTGCCACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 90 bp | CAAGGGCCAATAGGTGGCAGCATCTTTCTTTACAAACTGCTTGGCTaGGAGTTCCTGAAGTCTGCAGCTGGACTGTGGCTCAGTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: QGPIGGSIFLYKLLG*EFLKSAAGLWLSFD Trigger: ATCAAAACTGAGCCACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGCTGCCACCTATTGGCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS TCA 72 bp | AGGACGTCTAGTTCTCCATACATTTTCATACAGTCTTaGCAGGTGCATAGTTTGCTGCGCCAGTTCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RTSSSPYIFIQS*QVHSLLRQFKG Trigger: GCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATGGAGAACTAGACGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 72 bp | GTTCAAACAGTTTATGGCTTCCATGACATTCGTAACTaGAAGCTAGACAAATCCCTGCGGGCTCTTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VQTVYGFHDIRN*KLDKSLRALLP Trigger: AGGGAGAAGAGCCCGCAGGGATTTGTCTAGCTTGCAGTTACGAATGTCATGGAAGCCATAAACTGTTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 72 bp | CATACATTTTCATACAGTCTTGACAGGTGCATAGTTTaGTGCGCCAGTTCAAGGGCCAATAGGTGGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HTFSYSLDRCIV*CASSRANRWQH Trigger: ATGCTGCCACCTATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS TCA 72 bp | GCATCTTTCTTTACAAACTGCTTGGCTTGGAGTTCCTaGAGTCTGCAGCTGGACTGTGGCTCAGTTTTGATA | + |
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Preference number: 6 (lower is better) Translates to: ASFFTNCLAWSS*SLQLDCGSVLI Trigger: TATCAAAACTGAGCCACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 72 bp | CTAGTTCTCCATACATTTTCATACAGTCTTGACAGGTaGATAGTTTGCTGCGCCAGTTCAAGGGCCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: LVLHTFSYSLDR*IVCCASSRANR Trigger: CCTATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATGGAGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 72 bp | TTCAGGCCATTATCTTGGGGAGCTCCATTTTCAGGCTaGCTAACATCTTCATCTCCCATGCCAGTAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: FRPLSWGAPFSG*LTSSSPMPVAF Trigger: AAATGCTACTGGCATGGGAGATGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATAATGGCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS GCA 72 bp | GTCTTCAAGTCATTGTATTCACAGATGAGCTCCACTTaGTGGACTCTATTCATGCTGCTAAGGGTGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: VFKSLYSQMSST*WTLFMLLRVSI Trigger: AATGGACACCCTTAGCAGCATGAATAGAGTCCAGCAAGTGGAGCTCATCTGTGAATACAATGACTTGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CAA 72 bp | AGTCTTCAAGTCATTGTATTCACAGATGAGCTCCACTaGCTGGACTCTATTCATGCTGCTAAGGGTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLQVIVFTDELH*LDSIHAAKGVH Trigger: ATGGACACCCTTAGCAGCATGAATAGAGTCCAGCAAGTGGAGCTCATCTGTGAATACAATGACTTGAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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| CDS CCA 72 bp | TTCAAGTCATTGTATTCACAGATGAGCTCCACTTGCTaGACTCTATTCATGCTGCTAAGGGTGTCCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: FKSLYSQMSSTC*TLFMLLRVSIK Trigger: TTTAATGGACACCCTTAGCAGCATGAATAGAGTCCAGCAAGTGGAGCTCATCTGTGAATACAATGACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046404.8 |
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