RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBR4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066036

Ensembl transcript IDs: ENSMUST00000097822.10, ENSMUST00000129779.2, ENSMUST00000129949.8, ENSMUST00000147999.8, ENSMUST00000165860.8

Found 1664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTaGAGCTACAGACAACTTCATAGCCTGCGCAGCACACACACACAC +
Preference number: 2 (lower is better)
Translates to: RDSSQLLGTYRSFNG*SYRQLHSLRSTHTH
Trigger: GTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGGGCCTGCTGGGCCCTaGTGCTGCTCCCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEGPAGP*CCSPRL
Trigger: CAGCCGTGGGGAGCAGCAGCAGGGCCCAGCAGGCCC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCGGGTGAGCCAGGCCTaGAGGCGTACCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERVSQA*RRTGST
Trigger: TGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGCCGAGCGGCTGCTGTaGAGACTGGCCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEAERLL*RLARRL
Trigger: GAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCAGGACAGTGCCACTaGTTGTGGCAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPGQCH*LWQGRL
Trigger: CAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGTACCTCCTTCTGCCTaGGCTCGGGGCTTACTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEVPPSA*ARGLLG
Trigger: CCCCAGTAAGCCCCGAGCTCAGGCAGAAGGAGGTAC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGAGAGGCCTTGGGGGTaGATGTACAGGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEERPWG*MYRGQG
Trigger: CCCTTGGCCCCTGTACATTCACCCCCAAGGCCTCTC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGATGTGTCGCAGGGCTaGATTGGTGGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEDVSQG*IGGQGP
Trigger: AGGGCCCTGGCCACCAATCCAGCCCTGCGACACATC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGAGAGCCACAGAGGTaGAGGAGGCTCGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEREPQR*RRLGLG
Trigger: CCCTAACCCGAGCCTCCTTCACCTCTGTGGCTCTCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGTCAATGGGGAAGGTaGCCTGGCTGGATGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGESQWGR*PGWMCG
Trigger: CCCGCACATCCAGCCAGGTCACCTTCCCCATTGACT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCTGGGTCTCGTCGATaGGCTTGGTCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPGSRR*AWSSAA
Trigger: TGCTGCAGAGGACCAAGCTCATCGACGAGACCCAGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTGGCTCGGCGGCTGCTaGTGTCTTGGGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEWLGGC*CLGIHL
Trigger: CAAGTGGATCCCAAGACAGCAGCAGCCGCCGAGCCA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGGTAGGCCGAGCGGCTaGTGTGCAGACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGGRPSG*CADWPG
Trigger: TCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCCTGGTCCAGCCGGGTaGCCCTCAGCTGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRPGPAG*PSAVAS
Trigger: TGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCGCACAGGAGAGCAGCTaGAGCAGCACGGGGGACACC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPAQESS*SSTGDT
Trigger: GGTGTCCCCCGTGCTGCTGCAGCTGCTCTCCTGTGC...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGCACAGGAGAGCAGCTaGAGCAGCACGGGGGACACC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFAQESS*SSTGDT
Trigger: GGTGTCCCCCGTGCTGCTGCAGCTGCTCTCCTGTGC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGACAGGCTGCCTGCCTTaGTGCCTGTGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGETGCLP*CLCCWG
Trigger: ACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGGAGGTCAAGGACCTaGTGCTTGCGGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERRSRT*CLRLGT
Trigger: TGTCCCCAGCCGCAAGCAGCAGGTCCTTGACCTCCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCTGCTCAGCCACAGCTaGTCCTCCGCTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGELLSHS*SSAVLA
Trigger: AGCAAGGACAGCGGAGGAGCAGCTGTGGCTGAGCAG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCACCTGGGTGGCAGGGTaGTGCATGGCCAGACCCCGA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFTWVAG*CMARPR
Trigger: TCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCATGCGCTTCTTCTCTaGCCGGGTCTCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFHALLL*PGLPAG
Trigger: GCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGCCAGGGGCAGACTCTaGCCACACAGAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFARGRL*PHRVPR
Trigger: CCTGGGGACTCTGTGTGGCCAGAGTCTGCCCCTGGC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGAGCCGTCTCCCTCCTaGTGCCCAGTGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMEPSPS*CPVAVL
Trigger: CAGCACCGCCACTGGGCACCAGGAGGGAGACGGCTC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGTACCTCCTTCTGCCTaGGCTCGGGGCTTACTGGGG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFVPPSA*ARGLLG
Trigger: CCCCAGTAAGCCCCGAGCTCAGGCAGAAGGAGGTAC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCGCGGCGGGAGCTGCTaGTGGCCTGTCCAATCATGT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRGGSC*WPVQSC
Trigger: ACATGATTGGACAGGCCATCAGCAGCTCCCGCCGCG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCAGGGTGCTCCTGCTaGCAGTGGCTGCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPGCSC*QWLQRT
Trigger: GGTCCTTTGCAGCCACTGTCAGCAGGAGCACCCTGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGCTGGGCCCTGCTGCTaGTCCCCACGGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYAGPCC*SPRLKP
Trigger: AGGCTTCAGCCGTGGGGAGCAGCAGCAGGGCCCAGC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGGGCCTGCTGGGCCCTaGTGCTGCTCCCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRGPAGP*CCSPRL
Trigger: CAGCCGTGGGGAGCAGCAGCAGGGCCCAGCAGGCCC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCAGTTCACTGAGGGCCTaGTGGGCCCTGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGSSLRA*WALLLL
Trigger: GAGCAGCAGCAGGGCCCAGCAGGCCCTCAGTGAACT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTGGGCACTGATCAGCTaGCGTATAGTCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEWALIS*RIVWPW
Trigger: CCAGGGCCAGACTATACGGCAGCTGATCAGTGCCCA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTGGCTAACAGCCAAATaGTGGCGGCGCCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFWLTAK*WRRPWG
Trigger: CCCCCATGGGCGCCGCCAGCATTTGGCTGTTAGCCA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTGGCTAACAGCCAAATaGTGGCGGCGCCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGWLTAK*WRRPWG
Trigger: CCCCCATGGGCGCCGCCAGCATTTGGCTGTTAGCCA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGCCCGCTCGATGGCCTaGGTCCCAATCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRARSMA*VPIWIR
Trigger: GCGGATCCAGATTGGGACGCAGGCCATCGAGCGGGC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGCCGAGCGGCTGCTGTaGAGACTGGCCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVAERLL*RLARRL
Trigger: GAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGGATCAGGTGGATGTTaGTCTCACGGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFGSGGC*SHGRPH
Trigger: GTGGGGGCGGCCGTGAGAGCAACATCCACCTGATCC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCTCAGAGGCCTCTGTaGACAGGACGCAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPQRPL*TGRSRT
Trigger: GGTTCTACTGCGTCCTGTCCACAGAGGCCTCTGAGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCCAGGGGCAGACTCTaGCCACACAGAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHARGRL*PHRVPR
Trigger: CCTGGGGACTCTGTGTGGCCAGAGTCTGCCCCTGGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCACACCAAGCCAGGGTaGTTCATCACCTCGGACCAC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEHTKPG*FITSDH
Trigger: GTGGTCCGAGGTGATGAACCACCCTGGCTTGGTGTG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGAAGGGAAGTCTTCTaGGGGCTCATCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERREVF*GLIRPA
Trigger: GGCTGGCCTGATGAGCCCCCAGAAGACTTCCCTTCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCTCTTTGATTGCTGCTaGACACTGGCAGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGELFDCC*TLAGAG
Trigger: GCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGCAGGTTCTCCAACTaGGGCCGATGTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGESRFSN*GRCPMS
Trigger: GCTCATGGGACATCGGCCCCAGTTGGAGAACCTGCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGCAGCTGCCACCGACTaGAGCTGGTTCCGGGGAATG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRAAATD*SWFRGM
Trigger: CATTCCCCGGAACCAGCTTCAGTCGGTGGCAGCTGC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGAGAGGCCTTGGGGGTaGATGTACAGGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHERPWG*MYRGQG
Trigger: CCCTTGGCCCCTGTACATTCACCCCCAAGGCCTCTC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGATGGCTTGGGCCTTaGCCATTACTCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERWLGP*PLLWLR
Trigger: CCTGAGCCAGAGTAATGGTCAAGGCCCAAGCCATCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGGGCCTCCTCTCTGGTaGAGGGGAAGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGGPPLW*RGSQTS
Trigger: GCTGGTTTGACTTCCCCTTCACCAGAGAGGAGGCCC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGGCCAGGAGGCTCTTTaGTTGCTGCTGGACACTGGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFGQEAL*LLLDTG
Trigger: GCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGGCCTGCCAGCGCACTaGGGACGAGTTGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRGLPAH*GRVGLQ
Trigger: TTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCTGCAGCGAGGACATTaGAGGGTCTCTGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGLQRGH*RVSVEA
Trigger: GGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCCTTGGGATCTCTCTTaGGCCACAGCTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPPWDLS*ATAEPG
Trigger: CCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCCTTGGGATCTCTCTTaGGCCACAGCTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFPWDLS*ATAEPG
Trigger: CCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACACTCCCCCGCAACGCTaGGCTCGTCCAGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHTPPQR*ARPGNW
Trigger: CCAGTTACCTGGACGAGCTCAGCGTTGCGGGGGAGT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCGGGTGAGCCAGGCCTaGAGGCGTACCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREERVSQA*RRTGST
Trigger: TGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCATGGGGGTCAGGGTaGCCAGAAGCACAGCACACA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPWGSG*PEAQHT
Trigger: TGTGTGCTGTGCTTCTGGGCACCCTGACCCCCATGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCCAGGGCCAAGCAGCTaGCATCTTCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFPGPSS*HLPWLH
Trigger: GTGGAGCCAAGGAAGATGGCAGCTGCTTGGCCCTGG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTGTCAGCAGGAGAGGTaGTGGCATGGCGCACCAGAC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGCQQER*WHGAPD
Trigger: GTCTGGTGCGCCATGCCAGCACCTCTCCTGCTGACA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCCTGCTGGGCCCTGCTaGTGCTCCCCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEPAGPC*CSPRLK
Trigger: CTTCAGCCGTGGGGAGCAGCAGCAGGGCCCAGCAGG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCCTCTCCAGGACAGTaGCACTGGTTGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMASPGQ*HWLWQG
Trigger: CCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCCAGGGCACTGCTGCTaGTGCCTTGCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHPGHCC*CLAGPA
Trigger: AGCAGGACCAGCAAGGCAGCAGCAGCAGTGCCCTGG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGGGAGTCCAGGGTGTaGAGGTCTCGGAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMWESRV*RSRSCR
Trigger: CCGACAGCTCCGAGACCTGCACACCCTGGACTCCCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGGAGGCCGCCAGGGCTaGGAGCACTTTGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEGGRQG*EHFAAA
Trigger: TGCGGCAGCAAAGTGCTCGCAGCCCTGGCGGCCTCC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCGGGGACAGAGGCACTaGAGCGAGGACATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGRGQRH*SEDIEG
Trigger: CCCTTCAATGTCCTCGCTGCAGTGCCTCTGTCCCCG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCTGCCCGGGTCTCCCTaGGGGCTGCGTCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHLPGSP*GLRQSS
Trigger: AGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCGGAAGGAGCCCATTaGACTTCGTGTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPEGAH*TSCWRS
Trigger: AGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTCTGCACTGAATGACTaGTCCATGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGESALND*SMAKRR
Trigger: CCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCACGTGTTGGAGTCGGTaGAGGCGCTGGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFTCWSR*RRWHHC
Trigger: GCAGTGATGCCAGCGCCTCCACCGACTCCAACACGT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGATGGCCTTCCGGGCCTaGCTGCTCTCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMMAFRA*LLSSCF
Trigger: GAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCAT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCACCGCCTGCCACCTaGCTGTTACTGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPPPAT*LLLSFR
Trigger: CCTGAAGGACAGTAACAGCCAGGTGGCAGGCGGTGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCATGGGGAAGGTGACCTaGCTGGATGTGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGMGKVT*LDVRAV
Trigger: CACAGCCCGCACATCCAGCCAGGTCACCTTCCCCAT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAACGGGGCCCGCTCGATaGCCTGCGTCCCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVTGPAR*PASQSG
Trigger: TCCAGATTGGGACGCAGGCCATCGAGCGGGCCCCGT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCCACACTACCGCCATaGTCAGCTGGCGAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYPTLPP*SAGEVR
Trigger: GCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGGTGCCCCTCAGCTGTaGCGTCACCATATGCACTGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFGAPQL*RHHMHC
Trigger: GCAGTGCATATGGTGACGCCACAGCTGAGGGGCACC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGCAGTGTCAGGCAGTaGGCCTGCCAGCGCACTGAG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCSVRQ*ACQRTE
Trigger: CTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACACAGACGCCTGGGTTaGCGGGGACAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVHRRLG*RGQRHC
Trigger: GCAGTGCCTCTGTCCCCGCCAACCCAGGCGTCTGTG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGTCGCAGGGCTGGATTaGTGGCCAGGGCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHVAGLD*WPGPSV
Trigger: TACTGAGGGCCCTGGCCACCAATCCAGCCCTGCGAC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCAAGAGCTTCCACGATaGTACAGGCTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEQELPR*YRLPAL
Trigger: CAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTACGTGGGCTCCCGCTaGCCGGTACACTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYYVGSR*PVHSWR
Trigger: CCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTGTTCCAGGAAGCCTTaGAGGTTCTTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGECSRKP*RFFSSR
Trigger: CCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCTGACTCACTCTCGATaGCTGAGGCCACCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLTHSR*LRPPAA
Trigger: CGCAGCTGGTGGCCTCAGTCATCGAGAGTGAGTCAG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTGGCAGCCAGTTCTATaGGAGAGCCCGCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHWQPVL*ESPHAR
Trigger: CCGAGCATGCGGGCTCTCTCATAGAACTGGCTGCCA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGGCAGCCAGTTCTATaGGAGAGCCCGCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMWQPVL*ESPHAR
Trigger: CCGAGCATGCGGGCTCTCTCATAGAACTGGCTGCCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCTGTGTGCAGTTCACTaGGGGCCTGCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELCAVH*GPAGPC
Trigger: GCAGGGCCCAGCAGGCCCTCAGTGAACTGCACACAG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCTCCAGCAGCTTCTTaGTCCCACGCACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPPAAS*SHAHGS
Trigger: ACTCCCATGTGCGTGGGATCAAGAAGCTGCTGGAGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGCCAGATGGACCACATaGGATCTAGCAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEARWTT*DLARAP
Trigger: AGGAGCTCTTGCTAGATCTCATGTGGTCCATCTGGC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGGGGCCGATGTCCCATaGGCTGATGGTACACGCGGT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVGADVP*ADGTRG
Trigger: ACCGCGTGTACCATCAGCTCATGGGACATCGGCCCC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCGTCCAGGTAACTGGTaGGGAGGTCAAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPRPGNW*GGQGPA
Trigger: AGCAGGTCCTTGACCTCCTCACCAGTTACCTGGACG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCGTCCAGGTAACTGGTaGGGAGGTCAAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGRPGNW*GGQGPA
Trigger: AGCAGGTCCTTGACCTCCTCACCAGTTACCTGGACG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGTCTTGGTCACCACCTaGCCCTTTTCGTTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEVLVTT*PFSFVV
Trigger: GACGACAAACGAAAAGGGTCAGGTGGTGACCAAGAC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCAAGTGGCGAAAGCTaGTTCAGGGACATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMASGES*FRDMGA
Trigger: GGCCCCCATGTCCCTGAATCAGCTTTCGCCACTTGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGGTCTCCACTGGCATaGACTCCTCCTGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERSPLA*TPPGRF
Trigger: AAACCTTCCAGGAGGAGTTCATGCCAGTGGAGACCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGCCCGCTCGATGGCCTaGGTCCCAATCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEARSMA*VPIWIR
Trigger: GCGGATCCAGATTGGGACGCAGGCCATCGAGCGGGC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTCAGCTGCATGGTCCTaGCGAAGATCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGESAAWS*RRSRCR
Trigger: CCTACATCGAGATCTTCGGCAGGACCATGCAGCTGA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCGGCTCAGGTTCAGCTaGATGGTCCTGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRLRFS*MVLPKI
Trigger: GATCTTCGGCAGGACCATGCAGCTGAACCTGAGCCG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGTAGGCCGAGCGGCTaGTGTGCAGACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGRPSG*CADWPG
Trigger: TCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCTGCCTTGCTGGTCCTaGTGCAGGCTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHLPCWS*CRLRAM
Trigger: CATTGCCCTGAGCCTGCAGCAGGACCAGCAAGGCAG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGGTTCACGAGAGCTGTaGACAGCTGGTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHGSREL*TAGPPG
Trigger: GCCAGGAGGACCAGCTGTGCACAGCTCTCGTGAACC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGGTCAAGGACCTGCTaGTTGCGGCTGGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRSRTC*LRLGTV
Trigger: TACTGTCCCCAGCCGCAAGCAGCAGGTCCTTGACCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTGTTCAACATGCACTaGAGACCCCCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPLFNMH*RPPHWA
Trigger: GGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCAGCCAGGGTCCCAATaGCCTCATCACTGGACACCT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGQPGSQ*PHHWTP
Trigger: AGGTGTCCAGTGATGAGGGCATTGGGACCCTGGCTG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGGAGCTTGCTGGTCCTaGTGCAGGCTCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRGACWS*CRLRAM
Trigger: CATTGCCCTGAGCCTGCAGCAGGACCAGCAAGCTCC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGGATGGCCATACACGTaGCTACACTCACACCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEGWPYT*LHSHLH
Trigger: ATGCAGGTGTGAGTGTAGCCACGTGTATGGCCATCC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAGTCGGTGGAGGCGCTaGCATCACTGCTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSRWRR*HHCSWS
Trigger: GCTCCATGAGCAGTGATGCCAGCGCCTCCACCGACT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCCTCAGAGGCCTCTGTaGACAGGACGCAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFPQRPL*TGRSRT
Trigger: GGTTCTACTGCGTCCTGTCCACAGAGGCCTCTGAGG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGACCCGTCTCAGCACGTaGGCACTGATCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRTRLST*ALISCR
Trigger: ACGGCAGCTGATCAGTGCCCACGTGCTGAGACGGGT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCCTGCGTCCCAATCTaGATCCGCATGCCCGTCATC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMACVPI*IRMPVI
Trigger: GATGACGGGCATGCGGATCCAGATTGGGACGCAGGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGACGGGGCCCGCTCGATaGCCTGCGTCCCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRETGPAR*PASQSG
Trigger: TCCAGATTGGGACGCAGGCCATCGAGCGGGCCCCGT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTCAGGTTCAGCTGCATaGTCCTGCCGAAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGESGSAA*SCRRSR
Trigger: TCGAGATCTTCGGCAGGACCATGCAGCTGAACCTGA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCCAGGACAGTGCCACTaGTTGTGGCAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEPGQCH*LWQGRL
Trigger: CAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCTTCTGTTTCCATCTaGGGCAGCTTTGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPSVSI*GSFDSV
Trigger: CACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCCTGCATGTATGGGATaGCCCGGACACCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPPACMG*PGHLRH
Trigger: ATGTCGGAGGTGTCCGGGCCATCCCATACATGCAGG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTGTGGTTTCAGCAGTTaGCTGGCAGCCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFCGFSS*LAATGS
Trigger: GGAGCCTGTGGCTGCCAGCCAACTGCTGAAACCACA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCACTGGAAGACCCTGTaGAGGCCGCCAGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRHWKTL*RPPGLR
Trigger: TCGCAGCCCTGGCGGCCTCCACAGGGTCTTCCAGTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGGCTTGTCCAGAACTaGCTGCAGGAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMWLVQN*LQEGLR
Trigger: CCTCAGCCCCTCCTGCAGCCAGTTCTGGACAAGCCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGCACTGAGGACGAGTTaGACTCCAACAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEALRTS*TPTGNS
Trigger: GCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCACAGACGCCTGGGTTaGCGGGGACAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRHRRLG*RGQRHC
Trigger: GCAGTGCCTCTGTCCCCGCCAACCCAGGCGTCTGTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCGCAGTAAACGTGGGCTaGACAGACGTCCGGGATGAC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPAVNVG*TDVRDD
Trigger: GTCATCCCGGACGTCTGTCCAGCCCACGTTTACTGC...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGCAGACCCCCACACTaGGCCATCACACCGGCCATT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCRPPH*AITPAI
Trigger: AATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGCAGACCCCCACACTaGGCCATCACACCGGCCATT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCRPPH*AITPAI
Trigger: AATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGCTGATTCAGGGACATaGGGGCCCCAGACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYADSGT*GPQTGR
Trigger: CCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTACGTGGGCTCCCGCTaGCCGGTACACTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEYVGSR*PVHSWR
Trigger: CCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGAGAGCCACAGAGGTaGAGGAGGCTCGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVREPQR*RRLGLG
Trigger: CCCTAACCCGAGCCTCCTTCACCTCTGTGGCTCTCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGGCCATCACAACCATaGGCTCAGGGAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVWPSQP*AQGSRS
Trigger: GGACCGGCTTCCCTGAGCTCATGGTTGTGATGGCCA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCTCTTCCCCATCCACTaGCAGATGGCTTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMLFPIH*QMAWAL
Trigger: CAAGGCCCAAGCCATCTGTCAGTGGATGGGGAAGAG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCCAGGGTGCTCCTGCTaGCAGTGGCTGCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYPGCSC*QWLQRT
Trigger: GGTCCTTTGCAGCCACTGTCAGCAGGAGCACCCTGG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGCCTGGCTTCACCATaGCCACCAGAGGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREECLASP*PPEARQ
Trigger: CTGGCGTGCCTCTGGTGGTCATGGTGAAGCCAGGCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCTTTGCTGGATGTGTTaGGACACTGCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGELCWMC*DTAQLC
Trigger: GCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGGCCTGCCAGCGCACTaGGGACGAGTTGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEGLPAH*GRVGLQ
Trigger: TTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGGGGCCGATGTCCCATaGGCTGATGGTACACGCGGT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEGADVP*ADGTRG
Trigger: ACCGCGTGTACCATCAGCTCATGGGACATCGGCCCC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCGATTCACACTGGCTaGAGTGGAGCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMAIHTG*SGADAS
Trigger: GGAGGCATCAGCTCCACTTCAGCCAGTGTGAATCGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGACAGACGTCCGGGATaGCTTGGTGGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRDRRPG*LGGCFS
Trigger: AGAGAAGCAGCCACCAAGTCATCCCGGACGTCTGTC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCTTCCAGGCTTCGTATaGTGCCTTGGGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGELPGFV*CLGISL
Trigger: AAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCACTCCCCCGCAACGCTaGGCTCGTCCAGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEATPPQR*ARPGNW
Trigger: CCAGTTACCTGGACGAGCTCAGCGTTGCGGGGGAGT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGCAGATGCAGCACGTaGGTCCCGGCTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCRCST*VPAPQS
Trigger: TGATTGAGGAGCCGGGACTCACGTGCTGCATCTGCA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGCTGCCCTCGTCATCTaGGGCTGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREAALVI*GWSLLV
Trigger: GACCAGCAAGCTCCAGCCTCAGATGACGAGGGCAGC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGACTGAGGCCACCAGCTaGGGCAACTCCTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMTEATS*GNSFIS
Trigger: CGAGATGAAGGAGTTGCCGCAGCTGGTGGCCTCAGT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGTAGTGCGTGGACAGTaGGACAAAGGAGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEVVRGQ*DKGGVE
Trigger: TTCTACTCCTCCTTTGTCGCACTGTCCACGCACTAC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCATGGAGCCCTTCCTCTaGCGCTGCAGGACACACGCC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAMEPFL*RCRTHA
Trigger: GGCGTGTGTCCTGCAGCGGCAGAGGAAGGGCTCCAT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAGGCGCTGGCATCACTaGTCATGGAGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRRRWHH*SWSPSS
Trigger: AGAGGAAGGGCTCCATGAGCAGTGATGCCAGCGCCT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCCTTCCGGGCCTGGCTaGTCTCCAGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRPSGPG*SPAASP
Trigger: TGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACCATGGGGGTCAGGGTaGCCAGAAGCACAGCACACA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVPWGSG*PEAQHT
Trigger: TGTGTGCTGTGCTTCTGGGCACCCTGACCCCCATGG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCGCCAGCATATCTGTTaGCATGGGGGTCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYRQHIC*HGGQGA
Trigger: GGCACCCTGACCCCCATGGCAACAGATATGCTGGCG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGCCCAGCCAGTCCACTaGAGCATTGTGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFAQPVH*SIVKLK
Trigger: CTTCAGCTTCACAATGCTGCAGTGGACTGGCTGGGC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCCCTTGTCCACTGTGTaGAGTTCACTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHPLSTV*SSLRAC
Trigger: GCAGGCCCTCAGTGAACTGCACACAGTGGACAAGGG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCTCCCATTGGAGTGTTaGTTCGAGGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLPLEC*FEGRRA
Trigger: TGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTGGGAGTCCAGGGTGTaGAGGTCTCGGAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREWESRV*RSRSCR
Trigger: CCGACAGCTCCGAGACCTGCACACCCTGGACTCCCA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGGCCCGGAGGAAGATaGCCTGCTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRWPGGR*PAPPAA
Trigger: AGCTGCTGGAGGAGCAGGGCATCTTCCTCCGGGCCA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCGGGGACAGAGGCACTaGAGCGAGGACATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYRGQRH*SEDIEG
Trigger: CCCTTCAATGTCCTCGCTGCAGTGCCTCTGTCCCCG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGGCTGCCTGCCTTGCTaGCTGTGTTGCTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHGCLPC*LCCWGK
Trigger: TTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAACAGGCTGCCTGCCTTaGTGCCTGTGTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVTGCLP*CLCCWG
Trigger: ACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCATGAGCTTGGTCCTCTaGAGCACCAGCTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPMSLVL*STSFRK
Trigger: CTTGCGGAAGCTGGTGCTGCAGAGGACCAAGCTCAT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCTGTTCAACATGCACTaGAGACCCCCACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLFNMH*RPPHWA
Trigger: GGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGACCTGGGTGGCAGGGTaGTGCATGGCCAGACCCCGA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTETWVAG*CMARPR
Trigger: TCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCACCTGCTCCAGCTTATaGAGGCTCGTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGTCSSL*RLVMES
Trigger: GGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCATGGCCATGGCCATaGGCTTCTTCTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSWPWP*ASSLPG
Trigger: CCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGTTCCCAGAGCCTTCTaGCTCATGGCCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLVPRAF*LMAMAM
Trigger: CATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAAC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCCGGAAGGAGCCCATTaGACTTCGTGTTGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFPEGAH*TSCWRS
Trigger: AGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGGATCAGGTGGATGTTaGTCTCACGGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAGSGGC*SHGRPH
Trigger: GTGGGGGCGGCCGTGAGAGCAACATCCACCTGATCC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTCCACCAGAGCCTGTaGACTGATGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGFHQSL*TDGRRW
Trigger: CCATCTCCTCCCATCAGTCCACAGGCTCTGGTGGAA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCGTAGTCATCTTCTTTaGAGCTTGTGGACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGERSHLL*SLWTLS
Trigger: GGACAGGGTCCACAAGCTCCAAAGAAGATGACTACG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGCCAGGCCCCAGTTTaGGAGAGCCCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREECQAPV*ESPLPP
Trigger: AGGAGGGAGTGGGCTCTCCCAAACTGGGGCCTGGCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGGCATCACTGCTCATaGAGCCCTTCCTCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMWHHCS*SPSSAA
Trigger: AGCGGCAGAGGAAGGGCTCCATGAGCAGTGATGCCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCAGGGTCTTTGCGGCTaGCCAAGATGTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGQGLCG*PRCCPS
Trigger: AGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGCAACTCCCAGCTGCTaGAGCAGTGTATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGATPSC*SSVFCR
Trigger: CCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCCATGCAGCTTCTCCTaGGAGGGCTTCTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRPCSFS*EGFSVD
Trigger: GTCCACTGAGAAGCCCTCCCAGGAGAAGCTGCATGG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGAGCGAAGGAGAAATTaGCCTGATTCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEERRRN*PDSAAP
Trigger: AGGAGCTGCAGAATCAGGCCAATTTCTCCTTCGCTC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCGTGGGAACCATCAGCTaGTCTGTCATCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPVGTIS*SVISTP
Trigger: GGGTGTGGAGATGACAGACCAGCTGATGGTTCCCAC...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGCTGGCGGCGCCCATaGGGGGAAGAAAGCACACAC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRCWRRP*GEESTH
Trigger: GTGTGTGCTTTCTTCCCCCCATGGGCGCCGCCAGCA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGTGGGATGTCCAGCATaGGAGGAAAGCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGVGCPA*EESLQH
Trigger: GTGCTGAAGGCTTTCCTCCCATGCTGGACATCCCAC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGTCGTCTGCATCAGGTaGGATGTCCAGCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLVVCIR*DVQHGR
Trigger: CCTCCCATGCTGGACATCCCACCTGATGCAGACGAC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGTCGTCTGCATCAGGTaGGATGTCCAGCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRVVCIR*DVQHGR
Trigger: CCTCCCATGCTGGACATCCCACCTGATGCAGACGAC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCCTGCATGTATGGGATaGCCCGGACACCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMPACMG*PGHLRH
Trigger: ATGTCGGAGGTGTCCGGGCCATCCCATACATGCAGG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCAATGACCTGCATGTATaGGATGGCCCGGACACCTCC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPNDLHV*DGPDTS
Trigger: GGAGGTGTCCGGGCCATCCCATACATGCAGGTCATT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCAAGACATCAGCGGCATaGCCCTTCACATACTGGCGG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGKTSAA*PFTYWR
Trigger: CCGCCAGTATGTGAAGGGCCATGCCGCTGATGTCTT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACACTGGAAGACCCTGTaGAGGCCGCCAGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRHWKTL*RPPGLR
Trigger: TCGCAGCCCTGGCGGCCTCCACAGGGTCTTCCAGTG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGCAGTGTCAGGCAGTaGGCCTGCCAGCGCACTGAG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRCSVRQ*ACQRTE
Trigger: CTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAGCAGGTTCTCCAACTaGGGCCGATGTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSRFSN*GRCPMS
Trigger: GCTCATGGGACATCGGCCCCAGTTGGAGAACCTGCT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCAGTAAACGTGGGCTaGACAGACGTCCGGGATGAC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHAVNVG*TDVRDD
Trigger: GTCATCCCGGACGTCTGTCCAGCCCACGTTTACTGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTTGGTGGAGGAGGTGTaGCCACAGCCTAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFLVEEV*PQPKTD
Trigger: GTCTGTCTTAGGCTGTGGCCACACCTCCTCCACCAA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGGAGGCACATGAGCTaGCGGACCTCCTCTCGAATG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHRRHMS*RTSSRM
Trigger: CATTCGAGAGGAGGTCCGCCAGCTCATGTGCCTCCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTTGCTGGGTGGCCTCTaGGTTGTCTCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLLGGL*VVSGEE
Trigger: CTCCTCACCAGAGACAACCCAGAGGCCACCCAGCAA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTGCTGCCTGTGTTGCTaGGGTAAAGAGTACCTGCCG +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGCCLCC*GKEYLP
Trigger: CGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCTCCAGCAGCATGTCCTaGGTCTCGTCGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPSSSMS*VSSMSL
Trigger: CAAGCTCATCGACGAGACCCAGGACATGCTGCTGGA...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCAGACTCTGTACCTGTaGTCATGTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEQTLYL*SCPPAS
Trigger: AGATGCTGGAGGACATGACCACAGGTACAGAGTCTG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTCAATCAGAACCTGGGTaGCAGGGTGCTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLQSEPG*QGAAWP
Trigger: TGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTG...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTCTGCCTCATGGCCATaGCCATGCGCTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSASWP*PCASSL
Trigger: CAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGTCTGTCAACCTGGTaGCTCCTCCTGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCLSTW*LLLEPL
Trigger: CAGTGGCTCCAGGAGGAGCCACCAGGTTGACAGACA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCTCACTCTCGATGACTaGGGCCACCAGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELTLDD*GHQLRQ
Trigger: TTGCCGCAGCTGGTGGCCTCAGTCATCGAGAGTGAG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGAGGCCAGCTCTTTCTaGTCTTCCACGTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFEASSF*SSTSES
Trigger: GCTTTCAGACGTGGAAGATCAGAAAGAGCTGGCCTC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGCAGACGAGAAGGATTaGGGGGTTCCAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVADEKD*GVPAQA
Trigger: TGCCTGTGCTGGAACCCCTCAATCCTTCTCGTCTGC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGGCTGTGGCCATCATaGTCTGCACCAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEWLWPS*SAPAPH
Trigger: GTGGGGAGCTGGTGCAGATCATGATGGCCACAGCCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTGGCCATCACAACCATaGGCTCAGGGAAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAWPSQP*AQGSRS
Trigger: GGACCGGCTTCCCTGAGCTCATGGTTGTGATGGCCA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTTCGCTCTGAAATGCTaGCTCCTTCATGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEFALKC*LLHGRA
Trigger: AGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGCCTGGCTTCACCATaGCCACCAGAGGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTECLASP*PPEARQ
Trigger: CTGGCGTGCCTCTGGTGGTCATGGTGAAGCCAGGCA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGCCAGGAGGCTCTTTaGTTGCTGCTGGACACTGGC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGQEAL*LLLDTG
Trigger: GCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAACTTCCCCCGCTCTCTaGGCCCACACTACCGCCATG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRTSPAL*AHTTAM
Trigger: CATGGCGGTAGTGTGGGCTCAGAGAGCGGGGGAAGT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGATAGTCCACAGCCCCTaGGCTAAGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEIVHSP*AKQGCC
Trigger: GCAGCAGCCCTGCTTAGCTCAGGGGCTGTGGACTAT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCTGCAGCGAGGACATTaGAGGGTCTCTGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYLQRGH*RVSVEA
Trigger: GGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCCTGGGTCTCGTCGATaGGCTTGGTCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAPGSRR*AWSSAA
Trigger: TGCTGCAGAGGACCAAGCTCATCGACGAGACCCAGG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCAGGACAGGTATGGGATaGTACGCAGCAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGRTGMG*YAASPV
Trigger: TACAGGGCTTGCTGCGTATCATCCCATACCTGTCCT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGCAAGTGGCGAAAGCTaGTTCAGGGACATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAASGES*FRDMGA
Trigger: GGCCCCCATGTCCCTGAATCAGCTTTCGCCACTTGC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCATCTGTACCTCCTTCTaGCTGAGCTCGGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPICTSF*LSSGLT
Trigger: AGTAAGCCCCGAGCTCAGGCAGAAGGAGGTACAGAT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGGCATCAGCTACTGTTaGTGGCATGATGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEGISYC*WHDEEG
Trigger: TCCTTCTTCATCATGCCAGCAACAGTAGCTGATGCC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGGCGCTGGCATCACTaGTCATGGAGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRRWHH*SWSPSS
Trigger: AGAGGAAGGGCTCCATGAGCAGTGATGCCAGCGCCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGGTCAAGATGGCTCTaGGGCCCTTCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRWSRWL*GPSQRS
Trigger: GCTTCTCTGAGAAGGGCCGCAGAGCCATCTTGACCA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTGGTCAAGATGGCTCTaGGGCCCTTCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHWSRWL*GPSQRS
Trigger: GCTTCTCTGAGAAGGGCCGCAGAGCCATCTTGACCA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGTCTTGGGATCCACTTaGCCACCCAAAAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHVLGST*PPKRGT
Trigger: AGTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGAC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCTTCCGGGCCTGGCTaGTCTCCAGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPSGPG*SPAASP
Trigger: TGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTGTCAGCAGGAGAGGTaGTGGCATGGCGCACCAGAC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRECQQER*WHGAPD
Trigger: GTCTGGTGCGCCATGCCAGCACCTCTCCTGCTGACA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGCTGGGCCCTGCTGCTaGTCCCCACGGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIAGPCC*SPRLKP
Trigger: AGGCTTCAGCCGTGGGGAGCAGCAGCAGGGCCCAGC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCTGCTGGGCCCTGCTaGTGCTCCCCACGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPAGPC*CSPRLK
Trigger: CTTCAGCCGTGGGGAGCAGCAGCAGGGCCCAGCAGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGTTCACTGAGGGCCTaGTGGGCCCTGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTESSLRA*WALLLL
Trigger: GAGCAGCAGCAGGGCCCAGCAGGCCCTCAGTGAACT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGGGCACTGATCAGCTaGCGTATAGTCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVWALIS*RIVWPW
Trigger: CCAGGGCCAGACTATACGGCAGCTGATCAGTGCCCA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAGGCTCTTTGATTGCTaGTGGACACTGGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMRLFDC*WTLAGA
Trigger: AGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCAGCCGTCTCCTTCCTaGTTCTGCGGCTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEQPSPS*FCGSFP
Trigger: GGGGAAAGAGCCGCAGAAGCAGGAAGGAGACGGCTG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCATGGTCTCGTCGTCTaGATCAGGTGGGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMHGLVV*IRWDVQ
Trigger: CTGGACATCCCACCTGATGCAGACGACGAGACCATG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGCACTGCTGCTGCTaGCTTGCTGGTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEGHCCC*LAGPAA
Trigger: TGCAGCAGGACCAGCAAGGCAGCAGCAGCAGTGCCC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCTGGTCCAGCCGGGTaGCCCTCAGCTGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPGPAG*PSAVAS
Trigger: TGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGGCCCGGAGGAAGATaGCCTGCTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEWPGGR*PAPPAA
Trigger: AGCTGCTGGAGGAGCAGGGCATCTTCCTCCGGGCCA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGGAGGCCGCCAGGGCTaGGAGCACTTTGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMGGRQG*EHFAAA
Trigger: TGCGGCAGCAAAGTGCTCGCAGCCCTGGCGGCCTCC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGGTTCACGAGAGCTGTaGACAGCTGGTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYGSREL*TAGPPG
Trigger: GCCAGGAGGACCAGCTGTGCACAGCTCTCGTGAACC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTCATTCTCTCCACAGTTaGCACAGACGCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLHSLHS*HRRLGW
Trigger: CCAACCCAGGCGTCTGTGGCAACTGTGGAGAGAATG...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGGTGGAGCTCTGACTTaGTGGGGGATTTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRGGALT*WGISHC
Trigger: GCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACACGATGGTACAGGCTaGCTGCCTTGCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVHDGTG*LPCCLC
Trigger: ACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGAGAGCCAGGTACTCTaGAGCACACTCCCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAESQVL*STLPRN
Trigger: GTTGCGGGGGAGTGTGCTGCAGAGTACCTGGCTCTC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCTGCTGCAGGTCTGTaGTCAGCGTGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPAAGL*SAWPPP
Trigger: TGGAGGAGGCCACGCTGAGCACAGACCTGCAGCAGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGGTCTCCCTGCGGGCTaGGTCAATCTTCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMGLPAG*VNLLVH
Trigger: GTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCATGCGCTTCTTCTCTaGCCGGGTCTCCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPHALLL*PGLPAG
Trigger: GCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCATCTGCTTCAGGAGTaGAGTCTTGGTCACCACCTG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFHLLQE*SLGHHL
Trigger: CAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTTCGTGTTGGCGTTCTaGAGGGCAGCACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYFVLAF*RAALSH
Trigger: GTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGTCTCCCAGCCCTTGTaGAGTGCCTCCACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAVSQPL*SASTCK
Trigger: CTTGCAGGTGGAGGCACTCCACAAGGGCTGGGAGAC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGTCGGTGGAGGCGCTaGCATCACTGCTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSRWRR*HHCSWS
Trigger: GCTCCATGAGCAGTGATGCCAGCGCCTCCACCGACT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGACGTGTTGGAGTCGGTaGAGGCGCTGGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREETCWSR*RRWHHC
Trigger: GCAGTGATGCCAGCGCCTCCACCGACTCCAACACGT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCATGCAGCTTCTCCTaGGAGGGCTTCTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYPCSFS*EGFSVD
Trigger: GTCCACTGAGAAGCCCTCCCAGGAGAAGCTGCATGG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCATCCAGCCCACTGTTaGGATCTGCATGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHHPAHC*DLHGWP
Trigger: TGGCCAACCATGCAGATCCCAACAGTGGGCTGGATG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGAAGAACTCCTCCATaGCCTTCCGGGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYRRTPP*PSGPGC
Trigger: GCAGCCAGGCCCGGAAGGCCATGGAGGAGTTCTTCT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCATATCTGTTGCCATaGGGGTCAGGGTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHAYLLP*GSGCPE
Trigger: TTCTGGGCACCCTGACCCCCATGGCAACAGATATGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGATCACCTCGGACCACTaGCAAAGGGCAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRITSDH*QRAGEV
Trigger: GACTTCTCCTGCCCTTTGCCAGTGGTCCGAGGTGAT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGATGGGGAAGGTGACCTaGCTGGATGTGCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREMGKVT*LDVRAV
Trigger: CACAGCCCGCACATCCAGCCAGGTCACCTTCCCCAT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGGGAGAGCAACAAAGTaGCTAGCTCCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMGRATK*LAPERH
Trigger: ATGCCGCTCAGGAGCTAGCCACTTTGTTGCTCTCCC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGACACTGGCAGGCGCTaGCAGGGAGAGCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYDTGRR*QGEQQS
Trigger: ACTTTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGGCTGCTGTGCAGACTaGCCAGGAGGCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLGCCAD*PGGSLI
Trigger: AATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGTGGGATGTCCAGCATaGGAGGAAAGCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLVGCPA*EESLQH
Trigger: GTGCTGAAGGCTTTCCTCCCATGCTGGACATCCCAC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGAAGAGCTGGGTGCCTaGCCGGAGAGTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPEELGA*PESPRL
Trigger: GAGCCTGGGACTCTCCGGCCAGGCACCCAGCTCTTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGAGCCGTCTCCCTCCTaGTGCCCAGTGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIEPSPS*CPVAVL
Trigger: CAGCACCGCCACTGGGCACCAGGAGGGAGACGGCTC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAAGACATCAGCGGCATaGCCCTTCACATACTGGCGG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHKTSAA*PFTYWR
Trigger: CCGCCAGTATGTGAAGGGCCATGCCGCTGATGTCTT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCAACCTGCTGGGTGGTaGTGTACCGTGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMQPAGW*CTVCPL
Trigger: AAGTGGACACACGGTACACCACCACCCAGCAGGTTG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGCTTTACAACCTGCTaGGTGGTGGTGTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSFTTC*VVVYRV
Trigger: CACACGGTACACCACCACCCAGCAGGTTGTAAAGCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATTGAAGGGTCTCTGTaGAGGCCTGGTAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEIEGSL*RPGSSH
Trigger: ATGAGAACTACCAGGCCTCCACAGAGACCCTTCAAT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGCCATAGCACTTGGTaGAGGAGGTGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSHSTW*RRCGHS
Trigger: GCTGTGGCCACACCTCCTCCACCAAGTGCTATGGCT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACACAGCCATAGCACTTaGTGGAGGAGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVHSHST*WRRCGH
Trigger: GTGGCCACACCTCCTCCACCAAGTGCTATGGCTGTG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCGCAGCCAGTTGTTGTaGCCCAGCTTGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRRSQLL*PSLRSS
Trigger: ACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGCTGCCTGTGTTGCTaGGGTAAAGAGTACCTGCCG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCCLCC*GKEYLP
Trigger: CGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCAAGAGCTTCCACGATaGTACAGGCTGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHQELPR*YRLPAL
Trigger: CAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGAGCCTTCTGCCTCATaGCCATGGCCATGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYEPSAS*PWPCAS
Trigger: AGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCATTGCACTTCGTGTTaGCGTTCTGCAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMHCTSC*RSAGQH
Trigger: GTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGCTGATTCAGGGACATaGGGGCCCCAGACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRADSGT*GPQTGR
Trigger: CCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCGGCAGCTTCGTAGATaGGCATGTCATTGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHRQLRR*ACHCGG
Trigger: TCCGCCACAATGACATGCCCATCTACGAAGCTGCCG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCGCGGCGGGAGCTGCTaGTGGCCTGTCCAATCATGT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRGGSC*WPVQSC
Trigger: ACATGATTGGACAGGCCATCAGCAGCTCCCGCCGCG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGAGACGCCAGCAGCTTaGTGGCATGGTTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYETPAA*WHGLPV
Trigger: TACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGTTGGAAGCCAGGCCTaGGAACAACTCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRVGSQA*EQLRVF
Trigger: AAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAAC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTCACCAGCGAGTGGTTaGAGTGATAGAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSPASG*SDREQQ
Trigger: CTGCTGCTCTCTATCACTTCAACCACTCGCTGGTGA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGATCCCCAGTCAACCTaGCCAGGGAGAGGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYDPQST*PGRGGY
Trigger: ATACCCTCCTCTCCCTGGTCAGGTTGACTGGGGATC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTGTTGTAACATCCCGTaGTCAGCTTCTCATACACAC +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGECCNIP*SASHTH
Trigger: GTGTGTATGAGAAGCTGATCACGGGATGTTACAACA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCTGTGTGCAGTTCACTaGGGGCCTGCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMLCAVH*GPAGPC
Trigger: GCAGGGCCCAGCAGGCCCTCAGTGAACTGCACACAG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGCCTCCTCTCTGGTaGAGGGGAAGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEGPPLW*RGSQTS
Trigger: GCTGGTTTGACTTCCCCTTCACCAGAGAGGAGGCCC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCAGATGTTGCTGACTaGGGCAGAAGGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMADVAD*GRREVF
Trigger: GAAGACTTCCCTTCTGCCTCAGTCAGCAACATCTGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCAGATGTTGCTGACTaGGGCAGAAGGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHADVAD*GRREVF
Trigger: GAAGACTTCCCTTCTGCCTCAGTCAGCAACATCTGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGCCAGATGGACCACATaGGATCTAGCAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRARWTT*DLARAP
Trigger: AGGAGCTCTTGCTAGATCTCATGTGGTCCATCTGGC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCAGTTGGGGTGATTGGTaGGGATATGGTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPSWGDW*GYGSES
Trigger: GGACTCAGAACCATATCCTCACCAATCACCCCAACT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGTCCGGGAGTCAGCTaGACTTTCTTGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCPGVS*TFLALC
Trigger: GCACAAAGCCAAGAAAGTTCAGCTGACTCCCGGACA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGCCTCCCGCTGTTCCTaGGTCTTCCTGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREASRCS*VFLWLF
Trigger: GAAAAGCCACAGGAAGACTCAGGAACAGCGGGAGGC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGCGATTCACACTGGCTaGAGTGGAGCTGATGCCTCC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRAIHTG*SGADAS
Trigger: GGAGGCATCAGCTCCACTTCAGCCAGTGTGAATCGC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTCACGAAGAACTCCGTaGCTTCATTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSRRTP*LHSPQG
Trigger: ACCCTGAGGAGAATGAAGTCACGGAGTTCTTCGTGA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCACCGGTGTCTGCACTaGATGACTGCTCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYHRCLH*MTAPWR
Trigger: TCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCCAGCCCTTGTGGAGTaGCTCCACCTGCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAPALVE*LHLQVL
Trigger: CAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGCCCTTCTCACCAGATaGCTGCTTATTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFALLTR*LLIGAF
Trigger: AAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCACCACCCCCTGCAGTaGATTCTGCTTCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHHHPLQ*ILLHGS
Trigger: ACTACCATGAAGCAGAATGCACTGCAGGGGGTGGTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGGCTCGGCGGCTGCTaGTGTCTTGGGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEWLGGC*CLGIHL
Trigger: CAAGTGGATCCCAAGACAGCAGCAGCCGCCGAGCCA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTGGTCCCAGTGTGTTTaGCTTGCACCTACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYWSQCV*LAPTGA
Trigger: GGCTCCAGTAGGTGCAAGGCAAACACACTGGGACCA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGCCCAGCCAGTCCACTaGAGCATTGTGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVAQPVH*SIVKLK
Trigger: CTTCAGCTTCACAATGCTGCAGTGGACTGGCTGGGC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACCAGGGCCAAGCAGCTaGCATCTTCCTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRPGPSS*HLPWLH
Trigger: GTGGAGCCAAGGAAGATGGCAGCTGCTTGGCCCTGG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCCCTTGTCCACTGTGTaGAGTTCACTGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAPLSTV*SSLRAC
Trigger: GCAGGCCCTCAGTGAACTGCACACAGTGGACAAGGG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCTCCTTCCTGCTTCTaGGGCTCTTTCCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSPSCF*GSFPSS
Trigger: AGATGAGGGGAAAGAGCCGCAGAAGCAGGAAGGAGA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCAGCCGTCTCCTTCCTaGTTCTGCGGCTCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEQPSPS*FCGSFP
Trigger: GGGGAAAGAGCCGCAGAAGCAGGAAGGAGACGGCTG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGGCCCAGGGCACTGCTaGTGCTGCCTTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMGPGHC*CCLAGP
Trigger: AGGACCAGCAAGGCAGCAGCAGCAGTGCCCTGGGCC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAGCATGAGAATGACCTaGATGTATGGGATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSMRMT*MYGMAR
Trigger: CCGGGCCATCCCATACATGCAGGTCATTCTCATGCT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGGCTCCTCATCACTCTaGTGGCTCTTCCAGTATTCC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMGSSSL*WLFQYS
Trigger: GGAATACTGGAAGAGCCAGCAGAGTGATGAGGAGCC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCATCCTTGTTCTTCTTaGTGGTTGGGGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGHPCSS*WLGQVV
Trigger: AACCACCTGCCCCAACCAGCAAGAAGAACAAGGATG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCCAGTCTGTTCAACATaGACTGCAGACCCCCACACT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHPVCST*TADPHT
Trigger: AGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCTGCCCGGGTCTCCCTaGGGGCTGCGTCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPLPGSP*GLRQSS
Trigger: AGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGTTCCCAGAGCCTTCTaGCTCATGGCCATGGCCATG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAVPRAF*LMAMAM
Trigger: CATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAAC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAACTCTCCAGGACAGTaGCACTGGTTGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRNSPGQ*HWLWQG
Trigger: CCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGTT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGGATGGCCATACACGTaGCTACACTCACACCTGCAT +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLGWPYT*LHSHLH
Trigger: ATGCAGGTGTGAGTGTAGCCACGTGTATGGCCATCC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGTCTCCCAGCCCTTGTaGAGTGCCTCCACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRVSQPL*SASTCK
Trigger: CTTGCAGGTGGAGGCACTCCACAAGGGCTGGGAGAC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCATCCAGGGTGTAGATaGACTGCAGACTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMHPGCR*TADWGS
Trigger: AGATCCCCAGTCTGCAGTCCATCTACACCCTGGATG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAACACTCCTCCAGGATaGACTCATCCAGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMNTPPG*THPAHC
Trigger: ACAGTGGGCTGGATGAGTCCATCCTGGAGGAGTGTT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCTCCTTGCCCGGCACTaGCTAGAGTGGCCATCACAA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRLLARH*LEWPSQ
Trigger: TTGTGATGGCCACTCTAGCCAGTGCCGGGCAAGGAG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCACTGTGAAGGGAACTaGGGCAGAAGCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRHCEGN*GRSQAG
Trigger: ACCCGCTTGGCTTCTGCCCCAGTTCCCTTCACAGTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCCACGTACATGCCAGTaGAGTTCAGCCTGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPPRTCQ*SSACAL
Trigger: TAAAGCACAGGCTGAACTCCACTGGCATGTACGTGG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGAAGGGAAGTCTTCTaGGGGCTCATCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYRREVF*GLIRPA
Trigger: GGCTGGCCTGATGAGCCCCCAGAAGACTTCCCTTCT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGTCCTTGTCTCCCATTaGAGTGTTGCTTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHVLVSH*SVASRG
Trigger: TCCCCTCGAAGCAACACTCCAATGGGAGACAAGGAC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAGAGCTGTGCACAGCTaGTCCTCCTGGCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERAVHS*SSWLPE
Trigger: CTCTGGTAGCCAGGAGGACCAGCTGTGCACAGCTCT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGCACTGAGGACGAGTTaGACTCCAACAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMALRTS*TPTGNS
Trigger: GCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCAACCTGCTGGGTGGTaGTGTACCGTGTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYQPAGW*CTVCPL
Trigger: AAGTGGACACACGGTACACCACCACCCAGCAGGTTG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGCTTTACAACCTGCTaGGTGGTGGTGTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSFTTC*VVVYRV
Trigger: CACACGGTACACCACCACCCAGCAGGTTGTAAAGCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGCCATAGCACTTGGTaGAGGAGGTGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSHSTW*RRCGHS
Trigger: GCTGTGGCCACACCTCCTCCACCAAGTGCTATGGCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCACAGCCATAGCACTTaGTGGAGGAGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEHSHST*WRRCGH
Trigger: GTGGCCACACCTCCTCCACCAAGTGCTATGGCTGTG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGATGTGTCGCAGGGCTaGATTGGTGGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPDVSQG*IGGQGP
Trigger: AGGGCCCTGGCCACCAATCCAGCCCTGCGACACATC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAGGTCGTTCATTTGCTaGGTGGCCTCTGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMRSFIC*VASGLS
Trigger: AGACAACCCAGAGGCCACCCAGCAAATGAACGACCT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCAATCAGAACCTGGGTaGCAGGGTGCTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEQSEPG*QGAAWP
Trigger: TGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCATGGATGTTGAGCTaGTACGTGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSWMLS*YVGSRW
Trigger: CCAGCGGGAGCCCACGTACCAGCTCAACATCCATGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTCATGGATGTTGAGCTaGTACGTGGGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREESWMLS*YVGSRW
Trigger: CCAGCGGGAGCCCACGTACCAGCTCAACATCCATGA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGTCTGTCAACCTGGTaGCTCCTCCTGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREECLSTW*LLLEPL
Trigger: CAGTGGCTCCAGGAGGAGCCACCAGGTTGACAGACA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGATGGGCATGTCATTGTaGCGGATGTACTCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMMGMSL*RMYSAR
Trigger: TCTGGCCGAGTACATCCGCCACAATGACATGCCCAT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGGGCACTACCCACATaGAGGATGGCCATACACGTG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEWALPT*RMAIHV
Trigger: CACGTGTATGGCCATCCTTCATGTGGGTAGTGCCCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAAAGGATGTCTCTaGCGCGAAGGGCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREEKGCL*REGQPM
Trigger: CATTGGCTGCCCTTCGCGTCAGAGACATCCTTTCTC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGAGAAAGGATGTCTCTaGCGCGAAGGGCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEEKGCL*REGQPM
Trigger: CATTGGCTGCCCTTCGCGTCAGAGACATCCTTTCTC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCCTCCTCTGTGCTACTaGAGTCATCCTCATAGTACG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRPPLCY*SHPHST
Trigger: CGTACTATGAGGATGACTTCAGTAGCACAGAGGAGG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCATCTGATGACCCCTTaGGTCCATCTTTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRHLMTP*VHLCPP
Trigger: AGGTGGACAAAGATGGACTCAAGGGGTCATCAGATG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAGAAGCTGTGGAAGATaGGCAGCAGCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERSCGR*AAAAAG
Trigger: ACCTGCAGCTGCTGCTGCTCATCTTCCACAGCTTCT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAACCACGTTCTTCTGTaGCAGGTATTTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGENHVLL*QVFLAS
Trigger: AGATGCAAGAAATACCTGTCACAGAAGAACGTGGTT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGGCTCAGGGCATTTGTaGCATCGGCCAGGTAAGACA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYGSGHL*HRPGKT
Trigger: TGTCTTACCTGGCCGATGTCACAAATGCCCTGAGCC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGATGGCTTGGGCCTTaGCCATTACTCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRRWLGP*PLLWLR
Trigger: CCTGAGCCAGAGTAATGGTCAAGGCCCAAGCCATCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTCTTCCCCATCCACTaGCAGATGGCTTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLFPIH*QMAWAL
Trigger: CAAGGCCCAAGCCATCTGTCAGTGGATGGGGAAGAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCAGCATCTATCATGGTaGCACCAGCTGGATCCACGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYQHLSW*HQLDPR
Trigger: CCGTGGATCCAGCTGGTGTCACCATGATAGATGCTG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTTGGATGCTGTGTTaGTACAGTCCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSWMLC*YSPARR
Trigger: CCTGCGAGCTGGACTGTATCAACACAGCATCCAAGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTGTCTGCGATCTTCTTaGTTTGGTAGGGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFCLRSS*FGREAS
Trigger: TGAGGCTTCCCTACCAAATCAAGAAGATCGCAGACA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGAACTTCTGCCAGTTaGTGGTTCGCTGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRRTSAS*WFAGRQ
Trigger: TTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGTGGAAGATTTGGACTaGGTTGTGGCTTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFVEDLD*VVACPE
Trigger: TTCTGGACAAGCCACAACTCAGTCCAAATCTTCCAC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGTTGTAGTACAGGTTaGTCGTCCGCACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCCSTG*SSAPSW
Trigger: CCAAGATGGTGCGGACGATCAACCTGTACTACAACA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGAGACGGTGGAGCTCTaGCTTGCTGGGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPETVEL*LAGGFP
Trigger: GGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTTCACGAAGAACTCCGTaGCTTCATTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLSRRTP*LHSPQG
Trigger: ACCCTGAGGAGAATGAAGTCACGGAGTTCTTCGTGA...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGGAACGAAGGTGCTGTTaGTCTGGTCCAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMERRCC*SGPRAS
Trigger: TGATGCTCTTGGACCAGATCAACAGCACCTTCGTTC...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCAGGCTACCCGCTTGGTaGAAGTGTAAATGCCTAAGA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGRLPAW*KCKCLR
Trigger: TCTTAGGCATTTACACTTTCACCAAGCGGGTAGCCT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCGTAGTGCACAATGTTaGAATGGGACACAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGRSAQC*NGTQCC
Trigger: ACAGCACTGTGTCCCATTTCAACATTGTGCACTACG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCAGGGCTAGGATGGTaGAGTAGTGGGGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEAGLGW*SSGAHL
Trigger: TAGATGGGCCCCACTACTTCACCATCCTAGCCCTGC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGCAGGGCTAGGATGGTaGAGTAGTGGGGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRAGLGW*SSGAHL
Trigger: TAGATGGGCCCCACTACTTCACCATCCTAGCCCTGC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAACTTTACAGGCAGCTaGCACCGACTGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMNFTGS*HRLKLV
Trigger: AACCAGCTTCAGTCGGTGGCAGCTGCCTGTAAAGTT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCTTGATGGCATGGTTTaGCAGTATCACCGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGLDGMV*QYHREY
Trigger: GTACTCTCGGTGATACTGGCAAACCATGCCATCAAG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGGCTGGCCAAGATGTTaGCCTTCTCACCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAGWPRC*PSHQMP
Trigger: AGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGAGTGGCCATGTGGTaGTCTGAGAGAGAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERVAMW*SEREAL
Trigger: GAGCGCCTCTCTCTCAGAGCACCACATGGCCACTCT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGAGTGGCCATGTGGTaGTCTGAGAGAGAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRVAMW*SEREAL
Trigger: GAGCGCCTCTCTCTCAGAGCACCACATGGCCACTCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCTGGAGGACGGCAGTaGAGTCAATGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEAGGRQ*SQWSRR
Trigger: CCTTCTGCTCCATTGACTGCACTGCCGTCCTCCAGC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCGCAGGTCCCAAGATaGGCTCCAGAGAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPQVPR*APESYC
Trigger: GCAGTAACTCTCTGGAGCGCATCTTGGGACCTGCGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTGGCTGCTCTCCAGCTaGTTCTCCAGATACTGTAAA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFWLLSS*FSRYCK
Trigger: TTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTACGTGGTCAGTAACTaGAGCAGCTGCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYYVVSN*SSCRFS
Trigger: GGAGAACCGGCAGCTGCTGCAGTTACTGACCACGTA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTTGATGGGGAAGAGCTaGAACACCTCCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRLMGKS*NTSRVL
Trigger: GAGCACCCTGGAGGTGTTGCAGCTCTTCCCCATCAA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCATCATGGTTGTACGTTaGTGCTCATTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFIMVVR*CSLQAV
Trigger: CACTGCCTGCAATGAGCAGCAACGTACAACCATGAT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTCAGCTGCATGGTCCTaGCGAAGATCTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSAAWS*RRSRCR
Trigger: CCTACATCGAGATCTTCGGCAGGACCATGCAGCTGA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAGGCTCTTTGATTGCTaGTGGACACTGGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERLFDC*WTLAGA
Trigger: AGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTTGACTCGGTGAAGTaGACAAGGTTGTTAGGGCGT +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGFDSVK*TRLLGR
Trigger: ACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTCCTTCCTGCTTCTaGGGCTCTTTCCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSPSCF*GSFPSS
Trigger: AGATGAGGGGAAAGAGCCGCAGAAGCAGGAAGGAGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGACCACCATCGGGGATaGCCGATGACTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYDHHRG*PMTAFS
Trigger: AGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGAGGAAGAGCTGGGTaGCTGGCCGGAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRGRAG*LAGESQ
Trigger: CTGGGACTCTCCGGCCAGGCACCCAGCTCTTCCTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGCCTGTTGCTAGTGTaGACATCTCCTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSLLLV*TSPSAS
Trigger: GGAAGCTGAAGGAGATGTGCACACTAGCAACAGGCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGGCTCCTCATCACTCTaGTGGCTCTTCCAGTATTCC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYGSSSL*WLFQYS
Trigger: GGAATACTGGAAGAGCCAGCAGAGTGATGAGGAGCC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCACCAGGAAACTCACTTaGAGGAGGAAGTACAGGACA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGTRKLT*RRKYRT
Trigger: TGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTGCGAGCACTTTGCTaGCGCACAGAGCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLRALC*RTEHRR
Trigger: TCTCCTGTGCTCTGTGCGGCAGCAAAGTGCTCGCAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGATGAGCTTTACAACCTaGTGGGTGGTGGTGTACCGT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRMSFTT*WVVVYR
Trigger: ACGGTACACCACCACCCAGCAGGTTGTAAAGCTCAT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCAGTGGCCCTTCAGTaGAGTGGAGACTTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYPVALQ*SGDFAN
Trigger: ATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGTGGAGCTCTGACTTaGTGGGGGATTTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRGGALT*WGISHC
Trigger: GCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGGCTGCCTGCCTTGCTaGCTGTGTTGCTGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRGCLPC*LCCWGK
Trigger: TTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGGTCAAGGACCTGCTaGTTGCGGCTGGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRSRTC*LRLGTV
Trigger: TACTGTCCCCAGCCGCAAGCAGCAGGTCCTTGACCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGATGAGCTTGGTCCTCTaGAGCACCAGCTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEMSLVL*STSFRK
Trigger: CTTGCGGAAGCTGGTGCTGCAGAGGACCAAGCTCAT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGCTTGACCAGCTGCTaGCGGTTGACTTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSLTSC*RLTLTF
Trigger: GAAGGTCAAAGTCAACCGGCAGCAGCTGGTCAAGCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTGGGTGATTCCCTTCTaGAGGATGAGATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHWVIPF*RMRSFS
Trigger: GCTGAAGGATCTCATCCTGCAGAAGGGAATCACCCA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGACCTGCTCCAGCTTATaGAGGCTCGTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRTCSSL*RLVMES
Trigger: GGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCAGGCCACCAGCAGCCTaGGTAGGATCTCTACTCGAA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEARPPAA*VGSLLE
Trigger: TTCGAGTAGAGATCCTACGCAGGCTGCTGGTGGCCT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCTCGTACTGCTTCTCGTaGTGCAGGATTTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: HCKAVSSLESTGQAAARPSYCFS*CRISDS
Trigger: TGAGTCAGAAATCCTGCACCACGAGAAGCAGTACGA...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGAGCAGGTTTGTCAGTaGGACAGAGTCAATCAGCCG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYEQVCQ*DRVNQP
Trigger: CGGCTGATTGACTCTGTCCCACTGACAAACCTGCTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGCAACTCCCAGCTGCTaGAGCAGTGTATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYATPSC*SSVFCR
Trigger: CCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGAGCTGCAGCGTAGCTaGAAGGAGGTTCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYELQRS*KEVLGD
Trigger: ATCACCAAGAACCTCCTTCCAGCTACGCTGCAGCTC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTATGGCCTTCCGGGCCTaGCTGCTCTCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIMAFRA*LLSSCF
Trigger: GAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCAT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACACACCTTCTCCAACTTaGCTGTTCTCCCGAACGATG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHTPSPT*LFSRTM
Trigger: CATCGTTCGGGAGAACAGCCAAGTTGGAGAAGGTGT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGGAGAGGTGCTGGCATaGCGCACCAGACTTTCGGAA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRGEVLA*RTRLSE
Trigger: TTCCGAAAGTCTGGTGCGCCATGCCAGCACCTCTCC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAGGTGCTGGCATaGCGCACCAGACTTTCGGAA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEGEVLA*RTRLSE
Trigger: TTCCGAAAGTCTGGTGCGCCATGCCAGCACCTCTCC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGAGCGAAGGAGAAATTaGCCTGATTCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLERRRN*PDSAAP
Trigger: AGGAGCTGCAGAATCAGGCCAATTTCTCCTTCGCTC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTGCTGGCGGCGCCCATaGGGGGAAGAAAGCACACAC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSCWRRP*GEESTH
Trigger: GTGTGTGCTTTCTTCCCCCCATGGGCGCCGCCAGCA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCATGGCAACCATGTCTTaGATCTTTGCTTTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGMATMS*IFALAG
Trigger: TCCCGCCAAAGCAAAGATCCAAGACATGGTTGCCAT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGGTGTTCTCTACATTaGCCATGTAAATCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRCSLH*PCKSAG
Trigger: GCCTGCGGATTTACATGGCCAATGTAGAGAACACCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTCAGGTTCAGCTGCATaGTCCTGCCGAAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSGSAA*SCRRSR
Trigger: TCGAGATCTTCGGCAGGACCATGCAGCTGAACCTGA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGGAGAGCAACAAAGTaGCTAGCTCCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGRATK*LAPERH
Trigger: ATGCCGCTCAGGAGCTAGCCACTTTGTTGCTCTCCC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTATTGCTGCTGGACACTaGCAGGCGCTGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPIAAGH*QALAGR
Trigger: TCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAAT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAATATGAGTAAGGCCTaGCAGGCAGGCAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREENMSKA*QAGRCQ
Trigger: CTGGCACCTGCCTGCCTGCCAGGCCTTACTCATATT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAATATGAGTAAGGCCTaGCAGGCAGGCAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRENMSKA*QAGRCQ
Trigger: CTGGCACCTGCCTGCCTGCCAGGCCTTACTCATATT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCTGGAGCTGATGCTGTaGTGTCAGAGAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYLELML*CQRGFL
Trigger: CAGGAACCCTCTCTGACACCACAGCATCAGCTCCAG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACTGGCGGAGAAAGAATaGGCTCATATCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVLAEKE*AHIWRR
Trigger: TCTCCGCCAGATATGAGCCCATTCTTTCTCCGCCAG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGAGCTGTGCACAGCTaGTCCTCCTGGCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRAVHS*SSWLPE
Trigger: CTCTGGTAGCCAGGAGGACCAGCTGTGCACAGCTCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTTACAACCTGCTGGGTaGTGGTGTACCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYLQPAG*WCTVCP
Trigger: TGGACACACGGTACACCACCACCCAGCAGGTTGTAA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTCAGCTGAACTTTCTTaGCTTTGTGCCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSAELS*LCASEL
Trigger: CAGCTCGCTGGCACAAAGCCAAGAAAGTTCAGCTGA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCTTCTTCGTTCTCGATaGGATCCACTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLLRSR*DPLHSK
Trigger: CTTGCTGTGCAGTGGATCCCATCGAGAACGAAGAAG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGCAGGGCTGGATTGGTaGCCAGGGCCCTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIAGLDW*PGPSVV
Trigger: CACTACTGAGGGCCCTGGCCACCAATCCAGCCCTGC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGCAGGGCTGGATTGGTaGCCAGGGCCCTCAGTAGTG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMAGLDW*PGPSVV
Trigger: CACTACTGAGGGCCCTGGCCACCAATCCAGCCCTGC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATTGCTGGGTGGCCTCTaGGTTGTCTCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLLGGL*VVSGEE
Trigger: CTCCTCACCAGAGACAACCCAGAGGCCACCCAGCAA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCGTTCATTTGCTGGGTaGCCTCTGGGTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERSFAG*PLGCLW
Trigger: CCAGAGACAACCCAGAGGCCACCCAGCAAATGAACG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCAGGATTAGCCCAGTaGCCCTTCAGTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSGLAQ*PFSAVE
Trigger: CTCCACTGCACTGAAGGGCCACTGGGCTAATCCTGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTCAGGATTAGCCCAGTaGCCCTTCAGTGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREESGLAQ*PFSAVE
Trigger: CTCCACTGCACTGAAGGGCCACTGGGCTAATCCTGA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGCAGCTGTCCTCCTTaGAGATGGAATCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSSCPP*RWNLSA
Trigger: TGCTGACAGATTCCATCTCCAAGGAGGACAGCTGCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCTTCTTGTTCACATCTaGGTGTTCTCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRLLVHI*VFSQGL
Trigger: GAGGCCCTGAGAGAACACCCAGATGTGAACAAGAAG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGCCTTCTGCCTCATaGCCATGGCCATGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEEPSAS*PWPCAS
Trigger: AGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCCTTGCTAAGCAAGTaGCGAAAGCTGATTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHALLSK*RKLIQG
Trigger: TCCCTGAATCAGCTTTCGCCACTTGCTTAGCAAGGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTGTTCCAGGAAGCCTTaGAGGTTCTTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYCSRKP*RFFSSR
Trigger: CCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCGGCAGCTTCGTAGATaGGCATGTCATTGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERQLRR*ACHCGG
Trigger: TCCGCCACAATGACATGCCCATCTACGAAGCTGCCG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACGAGAAGGTCTCCACTaGCATGAACTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVREGLH*HELLLE
Trigger: TTCCAGGAGGAGTTCATGCCAGTGGAGACCTTCTCG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGAGGCTGGAGCTTGCTaGTCCTGCTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSEAGAC*SCCRLR
Trigger: CCTGAGCCTGCAGCAGGACCAGCAAGCTCCAGCCTC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCTCACTCTCGATGACTaGGGCCACCAGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSLTLDD*GHQLRQ
Trigger: TTGCCGCAGCTGGTGGCCTCAGTCATCGAGAGTGAG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTGACTCACTCTCGATaGCTGAGGCCACCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILTHSR*LRPPAA
Trigger: CGCAGCTGGTGGCCTCAGTCATCGAGAGTGAGTCAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGAGGCCAGCTCTTTCTaGTCTTCCACGTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEEASSF*SSTSES
Trigger: GCTTTCAGACGTGGAAGATCAGAAAGAGCTGGCCTC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATCCACCTGCAAGTCTTaGAAGAGAGACGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSTCKS*KRDASS
Trigger: GCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGTTGGAAGCCAGGCCTaGGAACAACTCAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEVGSQA*EQLRVF
Trigger: AAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAAC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCATCTGATGACCCCTTaGGTCCATCTTTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYHLMTP*VHLCPP
Trigger: AGGTGGACAAAGATGGACTCAAGGGGTCATCAGATG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCACCAGCGAGTGGTTaGAGTGATAGAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSPASG*SDREQQ
Trigger: CTGCTGCTCTCTATCACTTCAACCACTCGCTGGTGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTGGCTGTGGCCATCATaGTCTGCACCAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSWLWPS*SAPAPH
Trigger: GTGGGGAGCTGGTGCAGATCATGATGGCCACAGCCA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTTGCTTCAGGAGCGCTaGGAGCTGCAGCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELLQER*ELQHCD
Trigger: ATCACAGTGCTGCAGCTCTCAGCGCTCCTGAAGCAA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACACGCCAGTAGTCTGCTaGACACAACACACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYTPVVC*TQHTKP
Trigger: TGGCTTGGTGTGTTGTGTTCAGCAGACTACTGGCGT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGACCGTAGCTTCAATATaGGTAAGGCCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRETVASI*VRPGRQ
Trigger: CTGCCTGCCAGGCCTTACTCATATTGAAGCTACGGT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCTTGGATGCTGTGTTaGTACAGTCCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSWMLC*YSPARR
Trigger: CCTGCGAGCTGGACTGTATCAACACAGCATCCAAGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGATTCCAGCAGAGACTTaGGCACATGGAGGCAATAGT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRIPAET*AHGGNS
Trigger: ACTATTGCCTCCATGTGCTCAAGTCTCTGCTGGAAT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGGCAGGTCAATCTTaGCTTCTGTCTGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEEAGQS*LLSVRE
Trigger: CTCCCGGACAGACAGAAGTCAAGATTGACCTGCCTC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGTCCAGAAGTGTGTTaGTGTTGGAAACGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCPEVC*CWKRPS
Trigger: AGAAGGCCGTTTCCAACATCAACACACTTCTGGACA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGACAGACGTCCGGGATaGCTTGGTGGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPDRRPG*LGGCFS
Trigger: AGAGAAGCAGCCACCAAGTCATCCCGGACGTCTGTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCAAAGAGCTCTCGGATaGGGCCCTGGGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMQRALG*GPGRRG
Trigger: TCCTCGTCTCCCAGGGCCTCATCCGAGAGCTCTTTG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCTTCACACAGTAACTaGAGAGCTTCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYPSHSN*RASAAL
Trigger: CAGTGCTGCTGAAGCTCTTCAGTTACTGTGTGAAGG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGTCTTGGTCACCACCTaGCCCTTTTCGTTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAVLVTT*PFSFVV
Trigger: GACGACAAACGAAAAGGGTCAGGTGGTGACCAAGAC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAACTTTACAGGCAGCTaGCACCGACTGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYNFTGS*HRLKLV
Trigger: AACCAGCTTCAGTCGGTGGCAGCTGCCTGTAAAGTT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGTCGGCTACAGCCAGTaGACAGGCCTTTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAVGYSQ*TGLLSA
Trigger: TGCTGATAAAAGGCCTGTGCACTGGCTGTAGCCGAC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGATCTGTACCTCCTTCTaGCTGAGCTCGGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREICTSF*LSSGLT
Trigger: AGTAAGCCCCGAGCTCAGGCAGAAGGAGGTACAGAT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGCTACACTCACACCTaGATACAGACAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGYTHT*IQTAEA
Trigger: AGCCTCAGCTGTCTGTATGCAGGTGTGAGTGTAGCC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGTCTCCTCAAACCACTaGCCCAAAATAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYVSSNH*PKIGSL
Trigger: CAGTGAGCCTATTTTGGGGCAGTGGTTTGAGGAGAC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGTCTTGGGATCCACTTaGCCACCCAAAAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRVLGST*PPKRGT
Trigger: AGTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGAC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGAAAAGAACTTCACATaGCTCAGAATCCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFEKNFT*LRIQPV
Trigger: AACCGGCTGGATTCTGAGGCATGTGAAGTTCTTTTC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCGTTGGCAAATGCATTaGGCCAGGATCCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYRWQMH*ARIQCW
Trigger: CCAACATTGGATCCTGGCGCAATGCATTTGCCAACG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATACGTGGTCAGTAACTaGAGCAGCTGCCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRYVVSN*SSCRFS
Trigger: GGAGAACCGGCAGCTGCTGCAGTTACTGACCACGTA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGACACGCCACCGCCTaGCACCTGGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRHATA*HLAVTV
Trigger: GACAGTAACAGCCAGGTGGCAGGCGGTGGCGTGTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCATTGCAGGCAGTGTaGCTAATGGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSLQAV*LMATMS
Trigger: AGACATGGTTGCCATTAGGCACACTGCCTGCAATGA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTCATTGCAGGCAGTGTaGCTAATGGCAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSLQAV*LMATMS
Trigger: AGACATGGTTGCCATTAGGCACACTGCCTGCAATGA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGACACTGCACAGCTTTaGTCAACAAGGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYDTAQL*STRPGP
Trigger: AGGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCGGGGTCCAAGTCCTTaGCTTCTTTGCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERGPSP*LLCWMC
Trigger: ACACATCCAGCAAAGAAGGCAAGGACTTGGACCCCG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTTTTGACTCGGTGAAGTaGACAAGGTTGTTAGGGCGT +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLFDSVK*TRLLGR
Trigger: ACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAA...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCTCTTTCCCCTCATCTaGTCCTTCTGTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHLFPLI*SFCFHL
Trigger: CAGATGGAAACAGAAGGAGCAGATGAGGGGAAAGAG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAACTGGGGCAGTGTCTaGAGCAATCTTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYNWGSV*SNLSNS
Trigger: GCTGTTGGAAAGATTGCTGCAGACACTGCCCCAGTT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGCTAAGCAGGGCTGCTaGCGTGGCACTGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSAKQGC*RGTGDE
Trigger: CTCATCTCCAGTGCCACGGCAGCAGCCCTGCTTAGC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCCGAGAGCTGGTGTCTaGGATCTTCTTGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRPRAGV*DLLDLV
Trigger: TACCAAATCAAGAAGATCGCAGACACCAGCTCTCGG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCTGCGAGCACTTTGCTaGCGCACAGAGCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPLRALC*RTEHRR
Trigger: TCTCCTGTGCTCTGTGCGGCAGCAAAGTGCTCGCAG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACATTCTCTCCACAGTTaGCACAGACGCCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRHSLHS*HRRLGW
Trigger: CCAACCCAGGCGTCTGTGGCAACTGTGGAGAGAATG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAGAAGCCACAAGCATTaGAGAGGAAGGGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRRSHKH*RGRGPF
Trigger: AAAAGGACCCCTTCCTCTGCAATGCTTGTGGCTTCT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCTCGATGGGATCCACTaGACAGCAAGGCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELDGIH*TARLGI
Trigger: TATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACATCCTTGTTCTTCTTaGTGGTTGGGGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVHPCSS*WLGQVV
Trigger: AACCACCTGCCCCAACCAGCAAGAAGAACAAGGATG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATGGTACAGGCTGCCTaGCTTGCTGCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRMVQAA*LAACVA
Trigger: AGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGAGAGCCAGGTACTCTaGAGCACACTCCCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMESQVL*STLPRN
Trigger: GTTGCGGGGGAGTGTGCTGCAGAGTACCTGGCTCTC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGTAGAAAGTCCTCTTaGTGGGGGTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRCRKSS*WGSFSR
Trigger: CCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTGTAGAAAGTCCTCTTaGTGGGGGTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYCRKSS*WGSFSR
Trigger: CCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAAAATCTTTGACTCCTaGCAGTCTGTTCAACATGCA +
Preference number: 4 (lower is better)
Translates to: GGGGANAASVGEMSAHGEKIFDS*QSVQHA
Trigger: TGCATGTTGAACAGACTGGCAGGAGTCAAAGATTTT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTGCTCAGCCACAGCTaGTCCTCCGCTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILLSHS*SSAVLA
Trigger: AGCAAGGACAGCGGAGGAGCAGCTGTGGCTGAGCAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTACCGGCAGCAATTTTaGAGAAGCAATCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFYRQQF*RSNPGR
Trigger: TCTTCCTGGATTGCTTCTGCAAAATTGCTGCCGGTA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCATCTGCTTCAGGAGTaGAGTCTTGGTCACCACCTG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAHLLQE*SLGHHL
Trigger: CAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATTCCACCAGAGCCTGTaGACTGATGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRFHQSL*TDGRRW
Trigger: CCATCTCCTCCCATCAGTCCACAGGCTCTGGTGGAA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCTTCTTTGGAGCTTGTaGACCCTGTCCGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEALLWSL*TLSALA
Trigger: AGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAACAGCTGGAAGTTCTaGAAGTGCTCACCACCTGCG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYNSWKF*KCSPPA
Trigger: CGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGTGTGGAGGTGCTCTaGGCCATAATACTCAGGACT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVCVEVL*AIILRT
Trigger: AGTCCTGAGTATTATGGCCCAGAGCACCTCCACACA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTCTCAGAGAAGCTGTaGAAGATGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVFSEKL*KMSSSS
Trigger: GCTGCTGCTGCTCATCTTCCACAGCTTCTCTGAGAA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGATGGACTGCAGACTaGGGATCTCATGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYRWTAD*GSHAAG
Trigger: TCCAGCTGCATGAGATCCCCAGTCTGCAGTCCATCT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCAACACTCCTCCAGGATaGACTCATCCAGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEANTPPG*THPAHC
Trigger: ACAGTGGGCTGGATGAGTCCATCCTGGAGGAGTGTT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAGAAGAACTCCTCCATaGCCTTCCGGGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRRTPP*PSGPGC
Trigger: GCAGCCAGGCCCGGAAGGCCATGGAGGAGTTCTTCT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCCCGAACGATGTACGTaGTCAGTAACTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYPERCT*SVTAAA
Trigger: AGCTGCTGCAGTTACTGACCACGTACATCGTTCGGG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGGGAACCATCAGCTaGTCTGTCATCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEVGTIS*SVISTP
Trigger: GGGTGTGGAGATGACAGACCAGCTGATGGTTCCCAC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTACCCGTCTCAGCACGTaGGCACTGATCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLITRLST*ALISCR
Trigger: ACGGCAGCTGATCAGTGCCCACGTGCTGAGACGGGT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCACCGCCTGCCACCTaGCTGTTACTGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPPPAT*LLLSFR
Trigger: CCTGAAGGACAGTAACAGCCAGGTGGCAGGCGGTGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATCACCTCGGACCACTaGCAAAGGGCAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRITSDH*QRAGEV
Trigger: GACTTCTCCTGCCCTTTGCCAGTGGTCCGAGGTGAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGCCTGCGTCCCAATCTaGATCCGCATGCCCGTCATC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMACVPI*IRMPVI
Trigger: GATGACGGGCATGCGGATCCAGATTGGGACGCAGGC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCTCCTTCTCAATGATTaGGCCAACAGCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHLLLND*ANSKAA
Trigger: AGCTGCTTTGCTGTTGGCCCAATCATTGAGAAGGAG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCATTGCTGCTGGACACTaGCAGGCGCTGGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSIAAGH*QALAGR
Trigger: TCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAAT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGTCTCCGCTTGTTCCTaGGCCTTAGGACTCGAATCA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEVSACS*ALGLES
Trigger: TGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGAC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGTCTCCGCTTGTTCCTaGGCCTTAGGACTCGAATCA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYVSACS*ALGLES
Trigger: TGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGAC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGTCCTTGTCTCCCATTaGAGTGTTGCTTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYVLVSH*SVASRG
Trigger: TCCCCTCGAAGCAACACTCCAATGGGAGACAAGGAC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCATCTCAAAATCTCCATaGTCCACCTCACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFISKSP*STSLCS
Trigger: GGAACAGAGTGAGGTGGACCATGGAGATTTTGAGAT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGGTGCCCCTCAGCTGTaGCGTCACCATATGCACTGC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMGAPQL*RHHMHC
Trigger: GCAGTGCATATGGTGACGCCACAGCTGAGGGGCACC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTTTCAGCAGTTGGCTaGCAGCCACAGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEVSAVG*QPQAPH
Trigger: ATGAGGAGCCTGTGGCTGCCAGCCAACTGCTGAAAC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACAGTTGATGGTTCGCTaGGCGGCAATCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRQLMVR*AAISAQ
Trigger: CTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAGGAGGAAGCCACACTaGAAGACCCTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRRKPH*KTLWRP
Trigger: CGGCCTCCACAGGGTCTTCCAGTGTGGCTTCCTCCT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTTACAACCTGCTGGGTaGTGGTGTACCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELQPAG*WCTVCP
Trigger: TGGACACACGGTACACCACCACCCAGCAGGTTGTAA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCGGGATGACTTGGTaGCTGCTTCTCTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSGMTW*LLLFAV
Trigger: TACAGCAAAGAGAAGCAGCCACCAAGTCATCCCGGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTTGGTGGAGGAGGTGTaGCCACAGCCTAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELVEEV*PQPKTD
Trigger: GTCTGTCTTAGGCTGTGGCCACACCTCCTCCACCAA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGTCGCAGGGCTGGATTaGTGGCCAGGGCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLVAGLD*WPGPSV
Trigger: TACTGAGGGCCCTGGCCACCAATCCAGCCCTGCGAC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGAGGCACATGAGCTaGCGGACCTCCTCTCGAATG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRRHMS*RTSSRM
Trigger: CATTCGAGAGGAGGTCCGCCAGCTCATGTGCCTCCT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACGTTCATTTGCTGGGTaGCCTCTGGGTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRSFAG*PLGCLW
Trigger: CCAGAGACAACCCAGAGGCCACCCAGCAAATGAACG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCGCAGCCAGTTGTTGTaGCCCAGCTTGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERSQLL*PSLRSS
Trigger: ACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCAAGCCTCAAAATAAATaGCAGAGCAGGGCGAGACAA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGKPQNK*QSRARQ
Trigger: TTGTCTCGCCCTGCTCTGCCATTTATTTTGAGGCTT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTTCTTGTTCACATCTaGGTGTTCTCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYLLVHI*VFSQGL
Trigger: GAGGCCCTGAGAGAACACCCAGATGTGAACAAGAAG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATCTGCCTCATGGCCATaGCCATGCGCTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSASWP*PCASSL
Trigger: CAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACATTGCACTTCGTGTTaGCGTTCTGCAGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRHCTSC*RSAGQH
Trigger: GTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGATGGGCATGTCATTGTaGCGGATGTACTCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEMGMSL*RMYSAR
Trigger: TCTGGCCGAGTACATCCGCCACAATGACATGCCCAT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCAGAGCCTGTGGACTaGTGGGAGGAGATGGTACAG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPEPVD*WEEMVQ
Trigger: CTGTACCATCTCCTCCCATCAGTCCACAGGCTCTGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGGCTAGCCACATTCTaGGCTATGAACACACTCTTG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRLATF*AMNTLL
Trigger: CAAGAGTGTGTTCATAGCTCAGAATGTGGCTAGCCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTCAATCAGCCGTTaGATCCTTTGTGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRESISR*ILCVEV
Trigger: CACCTCCACACAAAGGATTCAACGGCTGATTGACTC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCCTCCTCTGTGCTACTaGAGTCATCCTCATAGTACG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRPPLCY*SHPHST
Trigger: CGTACTATGAGGATGACTTCAGTAGCACAGAGGAGG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCTTGTTTGATAAGGTaGTCCTTTATCCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPCLIR*SFIQLT
Trigger: TGTCAGCTGGATAAAGGATCACCTTATCAAACAAGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGTTGTAACATCCCGTaGTCAGCTTCTCATACACAC +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCCNIP*SASHTH
Trigger: GTGTGTATGAGAAGCTGATCACGGGATGTTACAACA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGGCTCAGGGCATTTGTaGCATCGGCCAGGTAAGACA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPGSGHL*HRPGKT
Trigger: TGTCTTACCTGGCCGATGTCACAAATGCCCTGAGCC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGATCGGAGACAGAGCCTaGGCTGCTGAAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMIGDRA*AAEGEH
Trigger: GTGCTCACCTTCAGCAGCTCAGGCTCTGTCTCCGAT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTATCGGAGACAGAGCCTaGGCTGCTGAAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIIGDRA*AAEGEH
Trigger: GTGCTCACCTTCAGCAGCTCAGGCTCTGTCTCCGAT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCTTTGCTGGATGTGTTaGGACACTGCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEALCWMC*DTAQLC
Trigger: GCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCTTTGATCCACAGATaGAGAGCAGAAGTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPLIHR*RAEVFE
Trigger: TTCGAAAACTTCTGCTCTTCATCTGTGGATCAAAGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAACCTTGCTGATGGTGTaGCTGCCAATGAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVTLLMV*LPMSFT
Trigger: TGTAAAGCTCATTGGCAGTCACACCATCAGCAAGGT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTGTTGTAGTACAGGTTaGTCGTCCGCACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEACCSTG*SSAPSW
Trigger: CCAAGATGGTGCGGACGATCAACCTGTACTACAACA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGCCTCCCGCTGTTCCTaGGTCTTCCTGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMASRCS*VFLWLF
Trigger: GAAAAGCCACAGGAAGACTCAGGAACAGCGGGAGGC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCAAAGAGCTCTCGGATaGGGCCCTGGGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLQRALG*GPGRRG
Trigger: TCCTCGTCTCCCAGGGCCTCATCCGAGAGCTCTTTG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAAGAGCATCACCAGTTaGTCCTTGTCACCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRKSITS*SLSPVR
Trigger: CCTCACAGGTGACAAGGATCAACTGGTGATGCTCTT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAACGAAGGTGCTGTTaGTCTGGTCCAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRERRCC*SGPRAS
Trigger: TGATGCTCTTGGACCAGATCAACAGCACCTTCGTTC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGGACAGGTATGGGATaGTACGCAGCAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERTGMG*YAASPV
Trigger: TACAGGGCTTGCTGCGTATCATCCCATACCTGTCCT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTGCAGATGCAGCACGTaGGTCCCGGCTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMCRCST*VPAPQS
Trigger: TGATTGAGGAGCCGGGACTCACGTGCTGCATCTGCA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGTGTCTGCACTGAATaGCTGCTCCATGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGVCTE*LLHGEA
Trigger: CGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACTGAGGCCACCAGCTaGGGCAACTCCTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTEATS*GNSFIS
Trigger: CGAGATGAAGGAGTTGCCGCAGCTGGTGGCCTCAGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATACTGCTTCTCGTGGTaGAGGATTTCTGACTCACTC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVYCFSW*RISDSL
Trigger: GAGTGAGTCAGAAATCCTGCACCACGAGAAGCAGTA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCAGCCCTTGTGGAGTaGCTCCACCTGCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPALVE*LHLQVL
Trigger: CAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTGGGCACCACCCCCTaGAGTGCATTCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILGTTP*SAFCFM
Trigger: CATGAAGCAGAATGCACTGCAGGGGGTGGTGCCCAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCTGGGCACCACCCCCTaGAGTGCATTCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMLGTTP*SAFCFM
Trigger: CATGAAGCAGAATGCACTGCAGGGGGTGGTGCCCAG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGCTCCTGGATGCTCTaGACAAGCATGGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSSWML*TSMVKM
Trigger: CATCTTGACCATGCTTGTGCAGAGCATCCAGGAGCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTCTTAGCAGATTGTGCTaGACCTGCTCAAACAGATAC +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLLSRLC*TCSNRY
Trigger: GTATCTGTTTGAGCAGGTGCAGCACAATCTGCTAAG...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGCCATCTTAGAGAAGTaGTCATCCAGAGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRAILEK*SSRETW
Trigger: CCAGGTCTCTCTGGATGAGCACTTCTCTAAGATGGC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTGGTCCCAGTGTGTTTaGCTTGCACCTACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPWSQCV*LAPTGA
Trigger: GGCTCCAGTAGGTGCAAGGCAAACACACTGGGACCA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTGTACGGCACAGGCTaGTCTTCTTGGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELYGTG*SSWASL
Trigger: AAGAGAAGCCCAAGAAGAGCAGCCTGTGCCGTACAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCGGCTCAGGTTCAGCTaGATGGTCCTGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRLRFS*MVLPKI
Trigger: GATCTTCGGCAGGACCATGCAGCTGAACCTGAGCCG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGATGTGTTGAGACACTaGACAGCTTTGCTCAACAAG +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLDVLRH*TALLNK
Trigger: CTTGTTGAGCAAAGCTGTGCAGTGTCTCAACACATC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGATGTGTTGAGACACTaGACAGCTTTGCTCAACAAG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHDVLRH*TALLNK
Trigger: CTTGTTGAGCAAAGCTGTGCAGTGTCTCAACACATC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCTCCCATTGGAGTGTTaGTTCGAGGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSLPLEC*FEGRRA
Trigger: TGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTTCATTCAGAGCACTaGGCTCGTTCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYLHSEH*ARSSWR
Trigger: TCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTCGATGGGATCCACTaGACAGCAAGGCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLDGIH*TARLGI
Trigger: TATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCAGTGGCCCTTCAGTaGAGTGGAGACTTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPVALQ*SGDFAN
Trigger: ATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGGCATGGATCTCATTaGAGTACGGTTTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRGHGSH*STVSLW
Trigger: CCACAGTGAAACCGTACTGCAATGAGATCCATGCCC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGGCATGGATCTCATTaGAGTACGGTTTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGHGSH*STVSLW
Trigger: CCACAGTGAAACCGTACTGCAATGAGATCCATGCCC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAGGAGGTCAAGGACCTaGTGCTTGCGGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLRRSRT*CLRLGT
Trigger: TGTCCCCAGCCGCAAGCAGCAGGTCCTTGACCTCCT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCCTGCTGCAGGTCTGTaGTCAGCGTGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFPAAGL*SAWPPP
Trigger: TGGAGGAGGCCACGCTGAGCACAGACCTGCAGCAGG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCAGTCTGTTCAACATaGACTGCAGACCCCCACACT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPVCST*TADPHT
Trigger: AGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCAGCCAGGGTCCCAATaGCCTCATCACTGGACACCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIQPGSQ*PHHWTP
Trigger: AGGTGTCCAGTGATGAGGGCATTGGGACCCTGGCTG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTCGTGTTGGCGTTCTaGAGGGCAGCACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIFVLAF*RAALSH
Trigger: GTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTCGTACTGCTTCTCGTaGTGCAGGATTTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSYCFS*CRISDS
Trigger: TGAGTCAGAAATCCTGCACCACGAGAAGCAGTACGA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTGGCATCACTGCTCATaGAGCCCTTCCTCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIWHHCS*SPSSAA
Trigger: AGCGGCAGAGGAAGGGCTCCATGAGCAGTGATGCCA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCTCATAGTACGTGTTaGAGTCGGTGGAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPHSTC*SRWRRW
Trigger: CCAGCGCCTCCACCGACTCCAACACGTACTATGAGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCAGGGTCTTTGCGGCTaGCCAAGATGTTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPQGLCG*PRCCPS
Trigger: AGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGATACACGGGGGCTTTaGAGTACTGATGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYDTRGL*STDEVG
Trigger: ACCTACTTCATCAGTACTCCAAAGCCCCCGTGTATC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGATGGACTGCAGACTaGGGATCTCATGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERWTAD*GSHAAG
Trigger: TCCAGCTGCATGAGATCCCCAGTCTGCAGTCCATCT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTACGGGATGGTGTCGTTaGCAAATGCATTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPTGWCR*QMHCAR
Trigger: CCTGGCGCAATGCATTTGCCAACGACACCATCCCGT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCACTGTGAAGGGAACTaGGGCAGAAGCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSHCEGN*GRSQAG
Trigger: ACCCGCTTGGCTTCTGCCCCAGTTCCCTTCACAGTG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGAGGAAGTAGAAGGTTaGACTCAAGGCATCAATAGA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGEEVEG*TQGINR
Trigger: TCTATTGATGCCTTGAGTCCAACCTTCTACTTCCTC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCACACCAAGCCAGGGTaGTTCATCACCTCGGACCAC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIHTKPG*FITSDH
Trigger: GTGGTCCGAGGTGATGAACCACCCTGGCTTGGTGTG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGGTGTTCTCTACATTaGCCATGTAAATCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRCSLH*PCKSAG
Trigger: GCCTGCGGATTTACATGGCCAATGTAGAGAACACCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCCACGTACATGCCAGTaGAGTTCAGCCTGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAPRTCQ*SSACAL
Trigger: TAAAGCACAGGCTGAACTCCACTGGCATGTACGTGG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCATGGTGACACCAGCTaGATCCACGGAGGCACCGAT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSHGDTS*IHGGTD
Trigger: ATCGGTGCCTCCGTGGATCCAGCTGGTGTCACCATG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTGGCTAGTTCAACCATaGTCTCGTCGTCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYWLVQP*SRRLHQ
Trigger: CTGATGCAGACGACGAGACCATGGTTGAACTAGCCA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGGCTAGTTCAACCATaGTCTCGTCGTCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEWLVQP*SRRLHQ
Trigger: CTGATGCAGACGACGAGACCATGGTTGAACTAGCCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACCCACACTACCGCCATaGTCAGCTGGCGAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGPTLPP*SAGEVR
Trigger: GCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAATGACCTGCATGTATaGGATGGCCCGGACACCTCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPNDLHV*DGPDTS
Trigger: GGAGGTGTCCGGGCCATCCCATACATGCAGGTCATT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTGCGCTCGTTCTTCTTaGAGACATCCTTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHCARSS*RHPFCP
Trigger: TGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCTCATCACGACCAAATaGACTTCATTCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHLITTK*TSFRAL
Trigger: CAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGGCCCTTCACATACTaGCGGAGAAAGAATGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEWPFTY*RRKNGL
Trigger: GAGCCCATTCTTTCTCCGCCAGTATGTGAAGGGCCA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAATTTGGACTGAGTTGTaGCTTGTCCAGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVIWTEL*LVQNWL
Trigger: CAGCCAGTTCTGGACAAGCCACAACTCAGTCCAAAT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGGTCGTTCATTTGCTaGGTGGCCTCTGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRSFIC*VASGLS
Trigger: AGACAACCCAGAGGCCACCCAGCAAATGAACGACCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGCAGCTGTCCTCCTTaGAGATGGAATCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSSCPP*RWNLSA
Trigger: TGCTGACAGATTCCATCTCCAAGGAGGACAGCTGCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCAGACTCTGTACCTGTaGTCATGTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEQTLYL*SCPPAS
Trigger: AGATGCTGGAGGACATGACCACAGGTACAGAGTCTG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTTCATTGCTGCTATATaGGTTTCCGGGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAFIAAI*VSGHPA
Trigger: GGCAGGATGCCCGGAAACCCATATAGCAGCAATGAA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAAGAGGCCCAATGCCTaGTTCATTGCTGCTATATGG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVKRPNA*FIAAIW
Trigger: CCATATAGCAGCAATGAACCAGGCATTGGGCCTCTT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCTTCTTCTTCATCTGTaGTGGAGTCCAGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYLLLHL*WSPGTR
Trigger: TCGAGTCCCTGGACTCCACCACAGATGAAGAAGAAG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGCACTGTTAGAAGGTaGCGTCCCTGCTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSTVRR*RPCLKS
Trigger: AGATTTTAAGCAGGGACGCCACCTTCTAACAGTGCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCAGCATCCAAATTCTTaGCACTGGGGATATGCTTTT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFQHPNS*HWGYAF
Trigger: AAAAGCATATCCCCAGTGCCAAGAATTTGGATGCTG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCAATGCCCTCATCACTaGACACCTGCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAQCPHH*TPAPAY
Trigger: ATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCAATGCCCTCATCACTaGACACCTGCTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRQCPHH*TPAPAY
Trigger: ATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAGCAGTTTGATGTCATaGATGTTGAGCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSSLMS*MLSWYV
Trigger: CACGTACCAGCTCAACATCCATGACATCAAACTGCT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATGTATGGGATCAGGTaGATGTTGCTCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRMYGIR*MLLSRP
Trigger: CGGCCGTGAGAGCAACATCCACCTGATCCCATACAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGGCATGAACTCCTCCTaGAAGGTTTTCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYGMNSS*KVFRAL
Trigger: CAAAGCCCTGAAAACCTTCCAGGAGGAGTTCATGCC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTCTAGGGTTAAAAACTaGGGTCAGCTGGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGSRVKN*GQLVQK
Trigger: TTTTTGAACCAGCTGACCTCAGTTTTTAACCCTAGA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGACCTGATCTGGAGATaGCTGCTCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYDLIWR*LLIIFS
Trigger: GGAGAAAATGATGAGCAGTCATCTCCAGATCAGGTC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAGAAGCTGTGGAAGATaGGCAGCAGCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRSCGR*AAAAAG
Trigger: ACCTGCAGCTGCTGCTGCTCATCTTCCACAGCTTCT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTTCACTCATCTCAGGTaGATTCATGGCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAFTHLR*IHGQLV
Trigger: AACCAGCTGGCCATGAATTCACCTGAGATGAGTGAA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCCTTGTTTGATAAGGTaGTCCTTTATCCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHPCLIR*SFIQLT
Trigger: TGTCAGCTGGATAAAGGATCACCTTATCAAACAAGG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAACATCGTACTTCACTaGACTACACTTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRNIVLH*TTLAGS
Trigger: GCTGCCAGCAAGTGTAGTTCAGTGAAGTACGATGTT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGAAGGAGGTTCTTGGTaGTCTCAGATGACTTATGGG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYEGGSW*SQMTYG
Trigger: CCCATAAGTCATCTGAGATCACCAAGAACCTCCTTC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGATCCCCAGTCAACCTaGCCAGGGAGAGGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLDPQST*PGRGGY
Trigger: ATACCCTCCTCTCCCTGGTCAGGTTGACTGGGGATC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAACGTCTCTTATCTTTaGGCTCGGCAGGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRNVSYL*ARQEEV
Trigger: TACTTCCTCCTGCCGAGCTCAAAGATAAGAGACGTT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGCCCTGACTGTAGCTaGAGAAAAGCATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRCPDCS*RKASAT
Trigger: TGTTGCAGATGCTTTTCTTCAGCTACAGTCAGGGCA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTACGCCAGTAGTCTGCTaGACACAACACACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPTPVVC*TQHTKP
Trigger: TGGCTTGGTGTGTTGTGTTCAGCAGACTACTGGCGT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCAGCATCTATCATGGTaGCACCAGCTGGATCCACGG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSQHLSW*HQLDPR
Trigger: CCGTGGATCCAGCTGGTGTCACCATGATAGATGCTG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCAATGGAGCGAGCTGTaGTCACCAGGCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLQWSEL*SPGAGT
Trigger: TGTTCCAGCGCCTGGTGATCACAGCTCGCTCCATTG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCATCTGGGGCAGCTTTaGCTCGGTGAAGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSHLGQL*LGEVHK
Trigger: CTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAAGTGGTTTACAAGCTaGGTGATGAAACTACAGCCG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVKWFTS*VMKLQP
Trigger: CGGCTGTAGTTTCATCACTCAGCTTGTAAACCACTT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTATCGGGGATGCCCGATaGCTGCATTTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPIGDAR*LHFLIC
Trigger: GCAGATGAGAAAATGCAGTCATCGGGCATCCCCGAT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAACTTCCCCCGCTCTCTaGGCCCACACTACCGCCATG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGTSPAL*AHTTAM
Trigger: CATGGCGGTAGTGTGGGCTCAGAGAGCGGGGGAAGT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCACTTGGTACGAGACATaGAGACACTCAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEATWYET*RHSGVS
Trigger: TGAGACTCCTGAGTGTCTTCATGTCTCGTACCAAGT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCCTCCAGCAGCTTCTTaGTCCCACGCACATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLPPAAS*SHAHGS
Trigger: ACTCCCATGTGCGTGGGATCAAGAAGCTGCTGGAGG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGAGGCAGGTCAATCTTaGCTTCTGTCTGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMEAGQS*LLSVRE
Trigger: CTCCCGGACAGACAGAAGTCAAGATTGACCTGCCTC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCAACAGCTCTTTGCGTaGAGCAAAAACTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRQQLFA*SKNFLD
Trigger: ATCCAGAAAGTTTTTGCTTCACGCAAAGAGCTGTTG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCTTCACACAGTAACTaGAGAGCTTCAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPSHSN*RASAAL
Trigger: CAGTGCTGCTGAAGCTCTTCAGTTACTGTGTGAAGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCACCGGTGTCTGCACTaGATGACTGCTCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLHRCLH*MTAPWR
Trigger: TCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAAAGCACAGTGTGAATaGTGTATGGGATCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYKAQCE*CMGSGG
Trigger: TCCACCTGATCCCATACATCATTCACACTGTGCTTT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTTCTCACCAGATGCCTaGTTATTGGGGCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYFSPDA*LLGLLT
Trigger: GGTTAAAAGCCCCAATAAGCAGGCATCTGGTGAGAA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCACCACCCCCTGCAGTaGATTCTGCTTCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPHHPLQ*ILLHGS
Trigger: ACTACCATGAAGCAGAATGCACTGCAGGGGGTGGTG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGCTCCTGGATGCTCTaGACAAGCATGGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSSWML*TSMVKM
Trigger: CATCTTGACCATGCTTGTGCAGAGCATCCAGGAGCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTTAGCAGATTGTGCTaGACCTGCTCAAACAGATAC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYLSRLC*TCSNRY
Trigger: GTATCTGTTTGAGCAGGTGCAGCACAATCTGCTAAG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGATAGCCAAGACAGCTaGAAAGCCATGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEDSQDS*KAMQLL
Trigger: GAGAAGCTGCATGGCTTTGCAGCTGTCTTGGCTATC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCGTTGGCAAATGCATTaGGCCAGGATCCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERWQMH*ARIQCW
Trigger: CCAACATTGGATCCTGGCGCAATGCATTTGCCAACG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCCGCAGGTCCCAAGATaGGCTCCAGAGAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLPQVPR*APESYC
Trigger: GCAGTAACTCTCTGGAGCGCATCTTGGGACCTGCGG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCATCACATGCTTTCCATaGATTACATTGGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFITCFP*ITLAFS
Trigger: GCTGAATGCCAATGTAATGCATGGAAAGCATGTGAT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCTTATGGCATACCTTTaGACACACTGTGCACACACC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEALMAYL*THCAHT
Trigger: GGTGTGTGCACAGTGTGTGCAAAGGTATGCCATAAG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCTTATGGCATACCTTTaGACACACTGTGCACACACC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYLMAYL*THCAHT
Trigger: GGTGTGTGCACAGTGTGTGCAAAGGTATGCCATAAG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCTGTACGGCACAGGCTaGTCTTCTTGGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPLYGTG*SSWASL
Trigger: AAGAGAAGCCCAAGAAGAGCAGCCTGTGCCGTACAG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCAATCTGGATCCGCATaGCCGTCATCACCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSQSGSA*PSSPWC
Trigger: GCACCATGGTGATGACGGGCATGCGGATCCAGATTG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTCATGTAGATCTTGGATaGTGTGTTGATACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CKAVSSLESTGQAAARPLHVDLG*CVDTVQ
Trigger: CTGGACTGTATCAACACAGCATCCAAGATCTACATG...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACTGCATTTTCTCATCTaGGTCATCGTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVLHFLI*VIVIIV
Trigger: GACGATGATGACGATGACGCAGATGAGAAAATGCAG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCGCTAAGCAGGGCTGCTaGCGTGGCACTGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFAKQGC*RGTGDE
Trigger: CTCATCTCCAGTGCCACGGCAGCAGCCCTGCTTAGC...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTATGGTACAGGCTGCCTaGCTTGCTGCCTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIMVQAA*LAACVA
Trigger: AGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCAT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCAGATTGTAGCGCTTTaGTGTCTCAATGCACACAGC +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAQIVAL*CLNAHS
Trigger: GCTGTGTGCATTGAGACAGCAAAGCGCTACAATCTG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCCAGCTTGACCAGCTaGTGCCGGTTGACTTTGACC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSSLTS*CRLTLT
Trigger: GGTCAAAGTCAACCGGCAGCAGCTGGTCAAGCTGGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGGTCTCCCTGCGGGCTaGGTCAATCTTCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMGLPAG*VNLLVH
Trigger: GTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTGGAGGTACGTGTTGTaGCTTGCTAAGCAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPWRYVL*LAKQVA
Trigger: CGCCACTTGCTTAGCAAGGCACAACACGTACCTCCA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCTGCACTGAATGACTaGTCCATGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSALND*SMAKRR
Trigger: CCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCTTCTTTGGAGCTTGTaGACCCTGTCCGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPLLWSL*TLSALA
Trigger: AGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATGTGTGGAGGTGCTCTaGGCCATAATACTCAGGACT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRCVEVL*AIILRT
Trigger: AGTCCTGAGTATTATGGCCCAGAGCACCTCCACACA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATCACTGTCATCATCTTaGCTGCTGTCCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSLSSS*LLSSSV
Trigger: CACAGAGGAGGACAGCAGCCAAGATGATGACAGTGA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCAGCTTTTTCTTTACTaGGAGAGATGGTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHQLFLY*ERWSPQ
Trigger: TTGAGGAGACCATCTCTCCCAGTAAAGAAAAAGCTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTTAACACTCAGCTCCTaGATGCTCTGCACAAGCATG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELTLSS*MLCTSM
Trigger: CATGCTTGTGCAGAGCATCCAGGAGCTGAGTGTTAA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCGGCAGTGCAGTCAATaGAGCAGAAGGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRQCSQ*SRRTRS
Trigger: AGATCTCGTCCTTCTGCTCCATTGACTGCACTGCCG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACGGGATGGTGTCGTTaGCAAATGCATTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTGWCR*QMHCAR
Trigger: CCTGGCGCAATGCATTTGCCAACGACACCATCCCGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGCATATCTGTTGCCATaGGGGTCAGGGTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMAYLLP*GSGCPE
Trigger: TTCTGGGCACCCTGACCCCCATGGCAACAGATATGC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAAAAGGAACCATACTTaGCGTAGGAAATCTCATGGT +
Preference number: 4 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFKRNHT*RRKSHG
Trigger: ACCATGAGATTTCCTACGCCAAGTATGGTTCCTTTT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGATGGCAACCATGTCTTaGATCTTTGCTTTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEMATMS*IFALAG
Trigger: TCCCGCCAAAGCAAAGATCCAAGACATGGTTGCCAT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGACACTGGCAGGCGCTaGCAGGGAGAGCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLDTGRR*QGEQQS
Trigger: ACTTTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGCTGCTGTGCAGACTaGCCAGGAGGCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGCCAD*PGGSLI
Trigger: AATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGTTTCAGCAGTTGGCTaGCAGCCACAGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIVSAVG*QPQAPH
Trigger: ATGAGGAGCCTGTGGCTGCCAGCCAACTGCTGAAAC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTGGCCCTTCACATACTaGCGGAGAAAGAATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPWPFTY*RRKNGL
Trigger: GAGCCCATTCTTTCTCCGCCAGTATGTGAAGGGCCA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTTCTTCGTTCTCGATaGGATCCACTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELLRSR*DPLHSK
Trigger: CTTGCTGTGCAGTGGATCCCATCGAGAACGAAGAAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTCCGGGATGACTTGGTaGCTGCTTCTCTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTESGMTW*LLLFAV
Trigger: TACAGCAAAGAGAAGCAGCCACCAAGTCATCCCGGA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGTTCTTCTTGCTGGTTaGGGCAGGTGGTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRVLLAG*GRWFNQ
Trigger: CTGATTAAACCACCTGCCCCAACCAGCAAGAAGAAC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGTTCTTCTTGCTGGTTaGGGCAGGTGGTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYVLLAG*GRWFNQ
Trigger: CTGATTAAACCACCTGCCCCAACCAGCAAGAAGAAC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCCAGCAGCATGTCCTaGGTCTCGTCGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSSSMS*VSSMSL
Trigger: CAAGCTCATCGACGAGACCCAGGACATGCTGCTGGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGAAAGTCCTCTTGCTaGGGGTCCTTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRKSSC*GSFSRV
Trigger: GACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGATAAACAATCCTCATaGGCTCTCCCTCATTGGTCG +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREDKQSS*ALPHWS
Trigger: CGACCAATGAGGGAGAGCCCATGAGGATTGTTTATC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAAGACCTTCGTGGGCTaGAACTTGTACCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSKTFVG*NLYPSL
Trigger: CAGGGAGGGGTACAAGTTCCAGCCCACGAAGGTCTT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAAGACCTTCGTGGGCTaGAACTTGTACCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMKTFVG*NLYPSL
Trigger: CAGGGAGGGGTACAAGTTCCAGCCCACGAAGGTCTT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGCCTTGCTAAGCAAGTaGCGAAAGCTGATTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRALLSK*RKLIQG
Trigger: TCCCTGAATCAGCTTTCGCCACTTGCTTAGCAAGGC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAGTGTGAATGATGTATaGGATCAGGTGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSVNDV*DQVDVA
Trigger: AGCAACATCCACCTGATCCCATACATCATTCACACT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
3UTR CAA 72 bp TCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTaGAGCTACAGACAACTTCATAGCCTGCGCAGCACA +
Preference number: 4 (lower is better)
Translates to: SQLLGTYRSFNG*SYRQLHSLRST
Trigger: TGTGCTGCGCAGGCTATGAAGTTGTCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGGAGGGAAAACTCAATaGGAACTTTACAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRGGKTQ*ELYRQL
Trigger: CAGCTGCCTGTAAAGTTCTCATTGAGTTTTCCCTCC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGAGACGCCAGCAGCTTaGTGGCATGGTTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLETPAA*WHGLPV
Trigger: TACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAACCACGTTCTTCTGTaGCAGGTATTTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVNHVLL*QVFLAS
Trigger: AGATGCAAGAAATACCTGTCACAGAAGAACGTGGTT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCATCTGCAACACGTGTaGGTAGTACACAGACACGCC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSHLQHV*VVHRHA
Trigger: GGCGTGTCTGTGTACTACTCACACGTGTTGCAGATG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATGCCCTGACTGTAGCTaGAGAAAAGCATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRCPDCS*RKASAT
Trigger: TGTTGCAGATGCTTTTCTTCAGCTACAGTCAGGGCA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCATCTGGGGCAGCTTTaGCTCGGTGAAGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLHLGQL*LGEVHK
Trigger: CTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGACCGTAGCTTCAATATaGGTAAGGCCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMTVASI*VRPGRQ
Trigger: CTGCCTGCCAGGCCTTACTCATATTGAAGCTACGGT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTATCGGGGATGCCCGATaGCTGCATTTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIIGDAR*LHFLIC
Trigger: GCAGATGAGAAAATGCAGTCATCGGGCATCCCCGAT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAGGGGTTGCCATTGTTaGCATTTTCAGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREERGCHC*HFQLFP
Trigger: TGGAAACAGCTGAAAATGTCAACAATGGCAACCCCT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCGGTATTTCTCCTTTaGTCCACAGATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSVFLL*STDEEQ
Trigger: CTGCTCTTCATCTGTGGATCAAAGGAGAAATACCGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTGGAAGATTTGGACTaGGTTGTGGCTTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEVEDLD*VVACPE
Trigger: TTCTGGACAAGCCACAACTCAGTCCAAATCTTCCAC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGTTGGGGTGATTGGTaGGGATATGGTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPSWGDW*GYGSES
Trigger: GGACTCAGAACCATATCCTCACCAATCACCCCAACT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGTCCAGAAGTGTGTTaGTGTTGGAAACGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTECPEVC*CWKRPS
Trigger: AGAAGGCCGTTTCCAACATCAACACACTTCTGGACA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAAGAGCATCACCAGTTaGTCCTTGTCACCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPKSITS*SLSPVR
Trigger: CCTCACAGGTGACAAGGATCAACTGGTGATGCTCTT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCATTGCTGTTGTTCTTaGTACCGGCAGCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYHCCCS*YRQQFC
Trigger: GCAAAATTGCTGCCGGTATCAAGAACAACAGCAATG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCAAAGCACAGTGTGAATaGTGTATGGGATCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAKAQCE*CMGSGG
Trigger: TCCACCTGATCCCATACATCATTCACACTGTGCTTT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATGGCGGACTTCATCATTaGTGTAAAGGTGATAATCTC +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYGGLHH*CKGDNL
Trigger: GAGATTATCACCTTTACAGCAATGATGAAGTCCGCC...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGCACTGTCACATCTTaGAGACGAGAAGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSTVTS*RREGLR
Trigger: CCTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGCTACACTCACACCTaGATACAGACAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGYTHT*IQTAEA
Trigger: AGCCTCAGCTGTCTGTATGCAGGTGTGAGTGTAGCC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGATGGAGCCCTTCCTCTaGCGCTGCAGGACACACGCC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMMEPFL*RCRTHA
Trigger: GGCGTGTGTCCTGCAGCGGCAGAGGAAGGGCTCCAT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATGGCTGCTCTCCAGCTaGTTCTCCAGATACTGTAAA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRWLLSS*FSRYCK
Trigger: TTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAGACACGCCACCGCCTaGCACCTGGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRHATA*HLAVTV
Trigger: GACAGTAACAGCCAGGTGGCAGGCGGTGGCGTGTCT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTTGATGGGGAAGAGCTaGAACACCTCCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLLMGKS*NTSRVL
Trigger: GAGCACCCTGGAGGTGTTGCAGCTCTTCCCCATCAA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGACCACCATCGGGGATaGCCGATGACTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIDHHRG*PMTAFS
Trigger: AGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCATGGTCTCGTCGTCTaGATCAGGTGGGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLHGLVV*IRWDVQ
Trigger: CTGGACATCCCACCTGATGCAGACGACGAGACCATG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGCCTGTTGCTAGTGTaGACATCTCCTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPSLLLV*TSPSAS
Trigger: GGAAGCTGAAGGAGATGTGCACACTAGCAACAGGCT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTTCATTCAGAGCACTaGGCTCGTTCTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLHSEH*ARSSWR
Trigger: TCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGAAGCCACAAGCATTaGAGAGGAAGGGGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRSHKH*RGRGPF
Trigger: AAAAGGACCCCTTCCTCTGCAATGCTTGTGGCTTCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCACGATGGTACAGGCTaGCTGCCTTGCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFHDGTG*LPCCLC
Trigger: ACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAAAATCTTTGACTCCTaGCAGTCTGTTCAACATGCA +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMKIFDS*QSVQHA
Trigger: TGCATGTTGAACAGACTGGCAGGAGTCAAAGATTTT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAGAAGGTGGCGTCCCTaGTTAAAATCTTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREERRWRP*LKSLTP
Trigger: AGGAGTCAAAGATTTTAAGCAGGGACGCCACCTTCT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGCTTGACCAGCTGCTaGCGGTTGACTTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLISLTSC*RLTLTF
Trigger: GAAGGTCAAAGTCAACCGGCAGCAGCTGGTCAAGCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTACCGGCAGCAATTTTaGAGAAGCAATCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEYRQQF*RSNPGR
Trigger: TCTTCCTGGATTGCTTCTGCAAAATTGCTGCCGGTA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTGGAGGTACGTGTTGTaGCTTGCTAAGCAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMWRYVL*LAKQVA
Trigger: CGCCACTTGCTTAGCAAGGCACAACACGTACCTCCA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGAGCTCGGGGCTTACTaGGGAGGCCAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGELGAY*GGQLFL
Trigger: CAGAAAGAGCTGGCCTCCCCAGTAAGCCCCGAGCTC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGTATCCAAGGCCATaGTTACATCAATCACCAGTG +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEGYPRP*LHQSPV
Trigger: CACTGGTGATTGATGTAACCATGGCCTTGGATACCC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGAGCAGGTTTGTCAGTaGGACAGAGTCAATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSEQVCQ*DRVNQP
Trigger: CGGCTGATTGACTCTGTCCCACTGACAAACCTGCTC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCGGCAGTGCAGTCAATaGAGCAGAAGGACGAGATCT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRQCSQ*SRRTRS
Trigger: AGATCTCGTCCTTCTGCTCCATTGACTGCACTGCCG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCATCCAGGGTGTAGATaGACTGCAGACTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMHPGCR*TADWGS
Trigger: AGATCCCCAGTCTGCAGTCCATCTACACCCTGGATG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCATCCAGCCCACTGTTaGGATCTGCATGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLHPAHC*DLHGWP
Trigger: TGGCCAACCATGCAGATCCCAACAGTGGGCTGGATG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCTCCTTGCCCGGCACTaGCTAGAGTGGCCATCACAA +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFLLARH*LEWPSQ
Trigger: TTGTGATGGCCACTCTAGCCAGTGCCGGGCAAGGAG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTCCTTCTCAATGATTaGGCCAACAGCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELLLND*ANSKAA
Trigger: AGCTGCTTTGCTGTTGGCCCAATCATTGAGAAGGAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCTCTTTGATTGCTGCTaGACACTGGCAGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFLFDCC*TLAGAG
Trigger: GCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCTTCTGTTTCCATCTaGGGCAGCTTTGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPSVSI*GSFDSV
Trigger: CACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTTGGGCTTAGATGCATaGAGTTTCCAGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYLGLDA*SFQKWF
Trigger: AAACCACTTCTGGAAACTCCATGCATCTAAGCCCAA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGCAGGCTCAGGGCAATaGCTAGTTCAACCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIAGSGQ*LVQPWS
Trigger: AGACCATGGTTGAACTAGCCATTGCCCTGAGCCTGC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGCGCTCGTTCTTCTTaGAGACATCCTTTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREECARSS*RHPFCP
Trigger: TGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAAGAGGACTCACAGATaGAAGATTTGGATCCAGACT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYKRTHR*KIWIQT
Trigger: AGTCTGGATCCAAATCTTCCATCTGTGAGTCCTCTT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCTGGCGGAGAAAGAATaGGCTCATATCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMLAEKE*AHIWRR
Trigger: TCTCCGCCAGATATGAGCCCATTCTTTCTCCGCCAG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATTTGGACTGAGTTGTaGCTTGTCCAGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRIWTEL*LVQNWL
Trigger: CAGCCAGTTCTGGACAAGCCACAACTCAGTCCAAAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACCTGCTGAGCCTTGTTaGAGTTTCTGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRPAEPC*SFCRCA
Trigger: TGCACATCTACAGAAACTCCAACAAGGCTCAGCAGG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACGTCCGGGATGACTTaGTGGCTGCTTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTSGMT*WLLLFA
Trigger: AGCAAAGAGAAGCAGCCACCAAGTCATCCCGGACGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGCAGTTTGATGTCATaGATGTTGAGCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSSLMS*MLSWYV
Trigger: CACGTACCAGCTCAACATCCATGACATCAAACTGCT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCATGTATGGGATCAGGTaGATGTTGCTCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSMYGIR*MLLSRP
Trigger: CGGCCGTGAGAGCAACATCCACCTGATCCCATACAT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGTGTGAATGATGTATaGGATCAGGTGGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSVNDV*DQVDVA
Trigger: AGCAACATCCACCTGATCCCATACATCATTCACACT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCGAGAAGGTCTCCACTaGCATGAACTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMREGLH*HELLLE
Trigger: TTCCAGGAGGAGTTCATGCCAGTGGAGACCTTCTCG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCAGCCGATCCAGCTTaGTTAGGGACTCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPADPA*LGTQFQ
Trigger: CTGAAACTGAGTCCCTAACCAAGCTGGATCGGCTGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGGAGGGAAAACTCAATaGGAACTTTACAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPGGKTQ*ELYRQL
Trigger: CAGCTGCCTGTAAAGTTCTCATTGAGTTTTCCCTCC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCTGGGCACTACCCACATaGAGGATGGCCATACACGTG +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFWALPT*RMAIHV
Trigger: CACGTGTATGGCCATCCTTCATGTGGGTAGTGCCCA...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGAGTCAATCAGCCGTTaGATCCTTTGTGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIESISR*ILCVEV
Trigger: CACCTCCACACAAAGGATTCAACGGCTGATTGACTC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGAAGGAGGTTCTTGGTaGTCTCAGATGACTTATGGG +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPEGGSW*SQMTYG
Trigger: CCCATAAGTCATCTGAGATCACCAAGAACCTCCTTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCATCTGCAACACGTGTaGGTAGTACACAGACACGCC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLHLQHV*VVHRHA
Trigger: GGCGTGTCTGTGTACTACTCACACGTGTTGCAGATG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAATGGAGCGAGCTGTaGTCACCAGGCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGQWSEL*SPGAGT
Trigger: TGTTCCAGCGCCTGGTGATCACAGCTCGCTCCATTG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCAACAGCTCTTTGCGTaGAGCAAAAACTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREQQLFA*SKNFLD
Trigger: ATCCAGAAAGTTTTTGCTTCACGCAAAGAGCTGTTG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTTCCAGGCTTCGTATaGTGCCTTGGGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILPGFV*CLGISL
Trigger: AAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGGAGACGGTGGAGCTCTaGCTTGCTGGGGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMETVEL*LAGGFP
Trigger: GGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCTC...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCAATGCACACAGCCATaGAGGCCTTGGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIQCTQP*RPWFQT
Trigger: AGTCTGAAACCAAGGCCTTCATGGCTGTGTGCATTG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGCTACCCGCTTGGTaGAAGTGTAAATGCCTAAGA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRLPAW*KCKCLR
Trigger: TCTTAGGCATTTACACTTTCACCAAGCGGGTAGCCT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCGTAGTGCACAATGTTaGAATGGGACACAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRSAQC*NGTQCC
Trigger: ACAGCACTGTGTCCCATTTCAACATTGTGCACTACG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGGTGTCTGCACTGAATaGCTGCTCCATGGCGAAGCG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGGVCTE*LLHGEA
Trigger: CGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTACTGCTTCTCGTGGTaGAGGATTTCTGACTCACTC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPYCFSW*RISDSL
Trigger: GAGTGAGTCAGAAATCCTGCACCACGAGAAGCAGTA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGGCGGACTTCATCATTaGTGTAAAGGTGATAATCTC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEGGLHH*CKGDNL
Trigger: GAGATTATCACCTTTACAGCAATGATGAAGTCCGCC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCCCTGCAGTGCATTCTaGTTCATGGTAGTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRPCSAF*FMVVKN
Trigger: GTTTTTAACTACCATGAAGCAGAATGCACTGCAGGG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCCCTGCAGTGCATTCTaGTTCATGGTAGTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREPCSAF*FMVVKN
Trigger: GTTTTTAACTACCATGAAGCAGAATGCACTGCAGGG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGAAAAGAACTTCACATaGCTCAGAATCCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYREKNFT*LRIQPV
Trigger: AACCGGCTGGATTCTGAGGCATGTGAAGTTCTTTTC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGCTGGAGGACGGCAGTaGAGTCAATGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGAGGRQ*SQWSRR
Trigger: CCTTCTGCTCCATTGACTGCACTGCCGTCCTCCAGC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGCCATCTTAGAGAAGTaGTCATCCAGAGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIAILEK*SSRETW
Trigger: CCAGGTCTCTCTGGATGAGCACTTCTCTAAGATGGC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGATAGCCAAGACAGCTaGAAAGCCATGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSDSQDS*KAMQLL
Trigger: GAGAAGCTGCATGGCTTTGCAGCTGTCTTGGCTATC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCGCCAGCATATCTGTTaGCATGGGGGTCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMRQHIC*HGGQGA
Trigger: GGCACCCTGACCCCCATGGCAACAGATATGCTGGCG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCGGGGTCCAAGTCCTTaGCTTCTTTGCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLRGPSP*LLCWMC
Trigger: ACACATCCAGCAAAGAAGGCAAGGACTTGGACCCCG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTGCATTTTCTCATCTaGGTCATCGTCATCATCGTC +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLHFLI*VIVIIV
Trigger: GACGATGATGACGATGACGCAGATGAGAAAATGCAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAGCATGAGAATGACCTaGATGTATGGGATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLSMRMT*MYGMAR
Trigger: CCGGGCCATCCCATACATGCAGGTCATTCTCATGCT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGATGAGCTTTACAACCTaGTGGGTGGTGGTGTACCGT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMMSFTT*WVVVYR
Trigger: ACGGTACACCACCACCCAGCAGGTTGTAAAGCTCAT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACTGCTTCATTCACTTTaGAGAGCAGGTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLLHSL*RAGSPT
Trigger: AGTTGGAGAACCTGCTCTGCAAAGTGAATGAAGCAG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCTCCAGCTTGACCAGCTaGTGCCGGTTGACTTTGACC +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFSSLTS*CRLTLT
Trigger: GGTCAAAGTCAACCGGCAGCAGCTGGTCAAGCTGGA...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTGGGTGATTCCCTTCTaGAGGATGAGATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIWVIPF*RMRSFS
Trigger: GCTGAAGGATCTCATCCTGCAGAAGGGAATCACCCA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCGTCTTCACTGTCTGTaGAAGCTTGGCGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRLHCL*KLGGLH
Trigger: ATGAAGTCCGCCAAGCTTCCACAGACAGTGAAGACG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAAAACTGAGGTCAGCTaGTTCAAAAAGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMKTEVS*FKKFIC
Trigger: ACAGATGAACTTTTTGAACCAGCTGACCTCAGTTTT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACCTCATAGTACGTGTTaGAGTCGGTGGAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGPHSTC*SRWRRW
Trigger: CCAGCGCCTCCACCGACTCCAACACGTACTATGAGG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCTTTACTGGGAGAGATaGTCTCCTCAAACCACTGCC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSLYWER*SPQTTA
Trigger: GGCAGTGGTTTGAGGAGACCATCTCTCCCAGTAAAG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTTCTCAGAGAAGCTGTaGAAGATGAGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMFSEKL*KMSSSS
Trigger: GCTGCTGCTGCTCATCTTCCACAGCTTCTCTGAGAA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGATACACGGGGGCTTTaGAGTACTGATGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPDTRGL*STDEVG
Trigger: ACCTACTTCATCAGTACTCCAAAGCCCCCGTGTATC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCTCTTCTCAGTCAGCTaGAAGAGTTTGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRLFSVS*KSLVKN
Trigger: ATTCTTCACCAAACTCTTCCAGCTGACTGAGAAGAG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACACCTTCTCCAACTTaGCTGTTCTCCCGAACGATG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTPSPT*LFSRTM
Trigger: CATCGTTCGGGAGAACAGCCAAGTTGGAGAAGGTGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACATGGTGACACCAGCTaGATCCACGGAGGCACCGAT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGHGDTS*IHGGTD
Trigger: ATCGGTGCCTCCGTGGATCCAGCTGGTGTCACCATG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGCAGGCTCAGGGCAATaGCTAGTTCAACCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLAGSGQ*LVQPWS
Trigger: AGACCATGGTTGAACTAGCCATTGCCCTGAGCCTGC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGAGGAGGAAGCCACACTaGAAGACCCTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMRRKPH*KTLWRP
Trigger: CGGCCTCCACAGGGTCTTCCAGTGTGGCTTCCTCCT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGGAAGCAAAAACTTTCTaGATGATTTTGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYREAKTF*MILESS
Trigger: TGAGCTCTCCAAAATCATCCAGAAAGTTTTTGCTTC...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTGTCCTCCTTGGAGATaGAATCTGTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMCPPWR*NLSAAA
Trigger: TGCTGCTGCTGACAGATTCCATCTCCAAGGAGGACA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTCATTGCTGCTATATaGGTTTCCGGGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIFIAAI*VSGHPA
Trigger: GGCAGGATGCCCGGAAACCCATATAGCAGCAATGAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACCAAATTCTTGGCACTaGGGATATGCTTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVPNSWH*GYAFSC
Trigger: ACATGAAAAAGCATATCCCCAGTGCCAAGAATTTGG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCAGCATCCAAATTCTTaGCACTGGGGATATGCTTTT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEQHPNS*HWGYAF
Trigger: AAAAGCATATCCCCAGTGCCAAGAATTTGGATGCTG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGCATGAACTCCTCCTaGAAGGTTTTCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGMNSS*KVFRAL
Trigger: CAAAGCCCTGAAAACCTTCCAGGAGGAGTTCATGCC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCCAGAGCCTGTGGACTaGTGGGAGGAGATGGTACAG +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMPEPVD*WEEMVQ
Trigger: CTGTACCATCTCCTCCCATCAGTCCACAGGCTCTGG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCACATTCTGAGCTATaGACACACTCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPHSEL*THSWSW
Trigger: CCAAGACCAAGAGTGTGTTCATAGCTCAGAATGTGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTACATCAATCACCAGTaGGTGAAAACCATTTCGAAC +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEYINHQ*VKTISN
Trigger: GTTCGAAATGGTTTTCACTCACTGGTGATTGATGTA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAACATCGTACTTCACTaGACTACACTTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMNIVLH*TTLAGS
Trigger: GCTGCCAGCAAGTGTAGTTCAGTGAAGTACGATGTT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAACGTCTCTTATCTTTaGGCTCGGCAGGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLINVSYL*ARQEEV
Trigger: TACTTCCTCCTGCCGAGCTCAAAGATAAGAGACGTT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACTTGGTACGAGACATaGAGACACTCAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTWYET*RHSGVS
Trigger: TGAGACTCCTGAGTGTCTTCATGTCTCGTACCAAGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGACCTTTGATCCACAGATaGAGAGCAGAAGTTTTCGAA +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRPLIHR*RAEVFE
Trigger: TTCGAAAACTTCTGCTCTTCATCTGTGGATCAAAGG...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCACCTTGCTGATGGTGTaGCTGCCAATGAGCTTTACA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSTLLMV*LPMSFT
Trigger: TGTAAAGCTCATTGGCAGTCACACCATCAGCAAGGT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAGCTCTCTGGATCGGTaGTTTCTGATAGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSSSLDR*FLIEDL
Trigger: CAGGTCTTCTATCAGAAATCACCGATCCAGAGAGCT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCGTCGGCTACAGCCAGTaGACAGGCCTTTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFVGYSQ*TGLLSA
Trigger: TGCTGATAAAAGGCCTGTGCACTGGCTGTAGCCGAC...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGCATCAGCTACTGTTaGTGGCATGATGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGISYC*WHDEEG
Trigger: TCCTTCTTCATCATGCCAGCAACAGTAGCTGATGCC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGCACTGTCACATCTTaGAGACGAGAAGGATTGAGG +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLISTVTS*RREGLR
Trigger: CCTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCTTGATGGCATGGTTTaGCAGTATCACCGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSLDGMV*QYHREY
Trigger: GTACTCTCGGTGATACTGGCAAACCATGCCATCAAG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGGCTGGCCAAGATGTTaGCCTTCTCACCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGGWPRC*PSHQMP
Trigger: AGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAGGTACACAGCTTATTaGAAAGAGAATCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRYTAY*KENLHQ
Trigger: CTGATGAAGATTCTCTTTGCAATAAGCTGTGTACCT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCATGGTTGTACGTTGCTaGTCATTGCAGGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLMVVRC*SLQAVC
Trigger: GCACACTGCCTGCAATGAGCAGCAACGTACAACCAT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAATCTGGATCCGCATaGCCGTCATCACCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGQSGSA*PSSPWC
Trigger: GCACCATGGTGATGACGGGCATGCGGATCCAGATTG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTTGATGCAGAACTTCTaGCAGTTGATGGTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMLMQNF*QLMVRW
Trigger: CCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCAGAGTTTCTTTGTCTaGAAATCTGTTCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRQSFFV*KSVQLV
Trigger: AACCAGCTGAACAGATTTGCAGACAAAGAAACTCTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTACTTTCTTGGCTTTGTaGCAGCGAGCTGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPTFLAL*QRAGLF
Trigger: AAATAAGCCAGCTCGCTGGCACAAAGCCAAGAAAGT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAGGCCACCAGCAGCCTaGGTAGGATCTCTACTCGAA +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRPPAA*VGSLLE
Trigger: TTCGAGTAGAGATCCTACGCAGGCTGCTGGTGGCCT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAACAGCTGGAAGTTCTaGAAGTGCTCACCACCTGCG +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFNSWKF*KCSPPA
Trigger: CGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTCACTGTCATCATCTTaGCTGCTGTCCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLSLSSS*LLSSSV
Trigger: CACAGAGGAGGACAGCAGCCAAGATGATGACAGTGA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCTTTACTGGGAGAGATaGTCTCCTCAAACCACTGCC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLLYWER*SPQTTA
Trigger: GGCAGTGGTTTGAGGAGACCATCTCTCCCAGTAAAG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCGAGCTGCAGCGTAGCTaGAAGGAGGTTCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFELQRS*KEVLGD
Trigger: ATCACCAAGAACCTCCTTCCAGCTACGCTGCAGCTC...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGAGTCTTAATCTCCTaGATGAGGAAAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRVLIS*MRKVPG
Trigger: GCCAGGCACTTTCCTCATCCAGGAGATTAAGACTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAGAGTCTTAATCTCCTaGATGAGGAAAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSRVLIS*MRKVPG
Trigger: GCCAGGCACTTTCCTCATCCAGGAGATTAAGACTCT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTATCTCAAAATCTCCATaGTCCACCTCACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPISKSP*STSLCS
Trigger: GGAACAGAGTGAGGTGGACCATGGAGATTTTGAGAT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGTGTGGTTTCAGCAGTTaGCTGGCAGCCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMCGFSS*LAATGS
Trigger: GGAGCCTGTGGCTGCCAGCCAACTGCTGAAACCACA...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAAACAGCGCAGAAACTaGATCAGAGTTTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEKQRRN*IRVSLS
Trigger: AGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCTGCTGAGCCTTGTTaGAGTTTCTGTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPAEPC*SFCRCA
Trigger: TGCACATCTACAGAAACTCCAACAAGGCTCAGCAGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTTCCTGTGGCTTTTCTaGAGCTGCTTCATTCACTTT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEFLWLF*SCFIHF
Trigger: AAAGTGAATGAAGCAGCTCCAGAAAAGCCACAGGAA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGATAAACAATCCTCATaGGCTCTCCCTCATTGGTCG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMDKQSS*ALPHWS
Trigger: CGACCAATGAGGGAGAGCCCATGAGGATTGTTTATC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCTTCTTCTTCATCTGTaGTGGAGTCCAGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLLLLHL*WSPGTR
Trigger: TCGAGTCCCTGGACTCCACCACAGATGAAGAAGAAG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAAGCCTCAAAATAAATaGCAGAGCAGGGCGAGACAA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPKPQNK*QSRARQ
Trigger: TTGTCTCGCCCTGCTCTGCCATTTATTTTGAGGCTT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTCTAGGGTTAAAAACTaGGGTCAGCTGGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTESRVKN*GQLVQK
Trigger: TTTTTGAACCAGCTGACCTCAGTTTTTAACCCTAGA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAGGCTAGCCACATTCTaGGCTATGAACACACTCTTG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLRLATF*AMNTLL
Trigger: CAAGAGTGTGTTCATAGCTCAGAATGTGGCTAGCCT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTTCGCTCTGAAATGCTaGCTCCTTCATGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLFALKC*LLHGRA
Trigger: AGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGTTGCTTCAGGAGCGCTaGGAGCTGCAGCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMLLQER*ELQHCD
Trigger: ATCACAGTGCTGCAGCTCTCAGCGCTCCTGAAGCAA...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAAGTGGTTTACAAGCTaGGTGATGAAACTACAGCCG +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSKWFTS*VMKLQP
Trigger: CGGCTGTAGTTTCATCACTCAGCTTGTAAACCACTT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAGGGGTTGCCATTGTTaGCATTTTCAGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRGCHC*HFQLFP
Trigger: TGGAAACAGCTGAAAATGTCAACAATGGCAACCCCT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTGTCTGCGATCTTCTTaGTTTGGTAGGGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLCLRSS*FGREAS
Trigger: TGAGGCTTCCCTACCAAATCAAGAAGATCGCAGACA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGAGAACTTCTGCCAGTTaGTGGTTCGCTGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMRTSAS*WFAGRQ
Trigger: TTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCAAAAACTTTCTGGATaGTTTTGGAGAGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEQKLSG*FWRAHR
Trigger: TCGATGAGCTCTCCAAAATCATCCAGAAAGTTTTTG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGATCACATGCTTTCCATaGATTACATTGGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEITCFP*ITLAFS
Trigger: GCTGAATGCCAATGTAATGCATGGAAAGCATGTGAT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTTGATGCAGAACTTCTaGCAGTTGATGGTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLLMQNF*QLMVRW
Trigger: CCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCAGAGTTTCTTTGTCTaGAAATCTGTTCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEQSFFV*KSVQLV
Trigger: AACCAGCTGAACAGATTTGCAGACAAAGAAACTCTG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAGAAGGTGGCGTCCCTaGTTAAAATCTTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSRRWRP*LKSLTP
Trigger: AGGAGTCAAAGATTTTAAGCAGGGACGCCACCTTCT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATCAGCTACTGTTGCTaGCATGATGAAGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRISYCC*HDEEGI
Trigger: AATTCCTTCTTCATCATGCCAGCAACAGTAGCTGAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGGGTATCCAAGGCCATaGTTACATCAATCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLGYPRP*LHQSPV
Trigger: CACTGGTGATTGATGTAACCATGGCCTTGGATACCC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCGTAGTCATCTTCTTTaGAGCTTGTGGACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFRSHLL*SLWTLS
Trigger: GGACAGGGTCCACAAGCTCCAAAGAAGATGACTACG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTGGGATCTGCATGGTTaGCCAGAATGTTGTAACATC +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIWDLHG*PECCNI
Trigger: GATGTTACAACATTCTGGCCAACCATGCAGATCCCA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACCCGAACGATGTACGTaGTCAGTAACTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGPERCT*SVTAAA
Trigger: AGCTGCTGCAGTTACTGACCACGTACATCGTTCGGG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTTCCATGCATTACATTaGCATTCAGCTTCTCAACCA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEFHALH*HSASQP
Trigger: TGGTTGAGAAGCTGAATGCCAATGTAATGCATGGAA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGAGGAAGTAGAAGGTTaGACTCAAGGCATCAATAGA +
Preference number: 4 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPEEVEG*TQGINR
Trigger: TCTATTGATGCCTTGAGTCCAACCTTCTACTTCCTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCTCATCACGACCAAATaGACTTCATTCAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMLITTK*TSFRAL
Trigger: CAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCAGTTGATGGTTCGCTaGGCGGCAATCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMQLMVR*AAISAQ
Trigger: CTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCATCTCCACGGCCTTCTaGGAATACTCCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLISTAF*EYSFNF
Trigger: GAAGTTGAAGGAGTATTCCCAGAAGGCCGTGGAGAT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAACGTCCGGGATGACTTaGTGGCTGCTTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGTSGMT*WLLLFA
Trigger: AGCAAAGAGAAGCAGCCACCAAGTCATCCCGGACGT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCTGTCCTCCTTGGAGATaGAATCTGTCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFCPPWR*NLSAAA
Trigger: TGCTGCTGCTGACAGATTCCATCTCCAAGGAGGACA...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAGCACTGTTAGAAGGTaGCGTCCCTGCTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSTVRR*RPCLKS
Trigger: AGATTTTAAGCAGGGACGCCACCTTCTAACAGTGCT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCTTCACTCATCTCAGGTaGATTCATGGCCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFFTHLR*IHGQLV
Trigger: AACCAGCTGGCCATGAATTCACCTGAGATGAGTGAA...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCATTCCAGCAGAGACTTaGGCACATGGAGGCAATAGT +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFIPAET*AHGGNS
Trigger: ACTATTGCCTCCATGTGCTCAAGTCTCTGCTGGAAT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGAGGTCTCCACTGGCATaGACTCCTCCTGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMRSPLA*TPPGRF
Trigger: AAACCTTCCAGGAGGAGTTCATGCCAGTGGAGACCT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAGCTCTCTGGATCGGTaGTTTCTGATAGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFSSLDR*FLIEDL
Trigger: CAGGTCTTCTATCAGAAATCACCGATCCAGAGAGCT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGCCCTTCTCACCAGATaGCTGCTTATTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGALLTR*LLIGAF
Trigger: AAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGGTACACAGCTTATTaGAAAGAGAATCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRYTAY*KENLHQ
Trigger: CTGATGAAGATTCTCTTTGCAATAAGCTGTGTACCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATGGTTGTACGTTGCTaGTCATTGCAGGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGMVVRC*SLQAVC
Trigger: GCACACTGCCTGCAATGAGCAGCAACGTACAACCAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGGACACTGCACAGCTTTaGTCAACAAGGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMDTAQL*STRPGP
Trigger: AGGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTC...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCACCAGGAAACTCACTTaGAGGAGGAAGTACAGGACA +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFTRKLT*RRKYRT
Trigger: TGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACTTTCTTGGCTTTGTaGCAGCGAGCTGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLTFLAL*QRAGLF
Trigger: AAATAAGCCAGCTCGCTGGCACAAAGCCAAGAAAGT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAATTCCAACAGCTCTTTaGGTGAAGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRIPTAL*VKQKLS
Trigger: AGAAAGTTTTTGCTTCACGCAAAGAGCTGTTGGAAT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCATCAGCTCTTCCATCTaGTTCAGGAGTGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFISSSI*FRSAVL
Trigger: CAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGAT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACGTCTTCACTGTCTGTaGAAGCTTGGCGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRLHCL*KLGGLH
Trigger: ATGAAGTCCGCCAAGCTTCCACAGACAGTGAAGACG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTCTTCTCAGTCAGCTaGAAGAGTTTGGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILFSVS*KSLVKN
Trigger: ATTCTTCACCAAACTCTTCCAGCTGACTGAGAAGAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAAGAGGACTCACAGATaGAAGATTTGGATCCAGACT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSKRTHR*KIWIQT
Trigger: AGTCTGGATCCAAATCTTCCATCTGTGAGTCCTCTT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATCAGCTGAACTTTCTTaGCTTTGTGCCAGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGSAELS*LCASEL
Trigger: CAGCTCGCTGGCACAAAGCCAAGAAAGTTCAGCTGA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAAGCAAAAACTTTCTaGATGATTTTGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEEAKTF*MILESS
Trigger: TGAGCTCTCCAAAATCATCCAGAAAGTTTTTGCTTC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGACCTGATCTGGAGATaGCTGCTCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGDLIWR*LLIIFS
Trigger: GGAGAAAATGATGAGCAGTCATCTCCAGATCAGGTC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACCACATTCTGAGCTATaGACACACTCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGPHSEL*THSWSW
Trigger: CCAAGACCAAGAGTGTGTTCATAGCTCAGAATGTGG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTACATCAATCACCAGTaGGTGAAAACCATTTCGAAC +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMYINHQ*VKTISN
Trigger: GTTCGAAATGGTTTTCACTCACTGGTGATTGATGTA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAAAGTTCATCGTACTTaGCAGGCTTGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIKVHRT*QAWRKE
Trigger: TTCTTTTCTCCAAGCCTGTCAAGTACGATGAACTTT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGGTCTCCTCAAACCACTaGCCCAAAATAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMVSSNH*PKIGSL
Trigger: CAGTGAGCCTATTTTGGGGCAGTGGTTTGAGGAGAC...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATCATGGTTGTACGTTaGTGCTCATTGCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGIMVVR*CSLQAV
Trigger: CACTGCCTGCAATGAGCAGCAACGTACAACCATGAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACTCTTTCCCCTCATCTaGTCCTTCTGTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGLFPLI*SFCFHL
Trigger: CAGATGGAAACAGAAGGAGCAGATGAGGGGAAAGAG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATCAGCTCTTCCATCTaGTTCAGGAGTGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGISSSI*FRSAVL
Trigger: CAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCATCAGCTACTGTTGCTaGCATGATGAAGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSISYCC*HDEEGI
Trigger: AATTCCTTCTTCATCATGCCAGCAACAGTAGCTGAT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATTAACACTCAGCTCCTaGATGCTCTGCACAAGCATG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGLTLSS*MLCTSM
Trigger: CATGCTTGTGCAGAGCATCCAGGAGCTGAGTGTTAA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTTCCATGCATTACATTaGCATTCAGCTTCTCAACCA +
Preference number: 4 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSFHALH*HSASQP
Trigger: TGGTTGAGAAGCTGAATGCCAATGTAATGCATGGAA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTTGGGCTTAGATGCATaGAGTTTCCAGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLLGLDA*SFQKWF
Trigger: AAACCACTTCTGGAAACTCCATGCATCTAAGCCCAA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATCTCCACGGCCTTCTaGGAATACTCCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGISTAF*EYSFNF
Trigger: GAAGTTGAAGGAGTATTCCCAGAAGGCCGTGGAGAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATTGAAGGGTCTCTGTaGAGGCCTGGTAGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGIEGSL*RPGSSH
Trigger: ATGAGAACTACCAGGCCTCCACAGAGACCCTTCAAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCAAATTCTTGGCACTaGGGATATGCTTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPNSWH*GYAFSC
Trigger: ACATGAAAAAGCATATCCCCAGTGCCAAGAATTTGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCCGAGAGCTGGTGTCTaGGATCTTCTTGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMPRAGV*DLLDLV
Trigger: TACCAAATCAAGAAGATCGCAGACACCAGCTCTCGG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCAGATTGTAGCGCTTTaGTGTCTCAATGCACACAGC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMQIVAL*CLNAHS
Trigger: GCTGTGTGCATTGAGACAGCAAAGCGCTACAATCTG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CCA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAAAACTGAGGTCAGCTaGTTCAAAAAGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: EMNEGRMQASFNLISMGMKTEVS*FKKFIC
Trigger: ACAGATGAACTTTTTGAACCAGCTGACCTCAGTTTT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAAAAGGAACCATACTTaGCGTAGGAAATCTCATGGT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLKRNHT*RRKSHG
Trigger: ACCATGAGATTTCCTACGCCAAGTATGGTTCCTTTT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCTTCCTGTGGCTTTTCTaGAGCTGCTTCATTCACTTT +
Preference number: 4 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFFLWLF*SCFIHF
Trigger: AAAGTGAATGAAGCAGCTCCAGAAAAGCCACAGGAA...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGTCGGTATTTCTCCTTTaGTCCACAGATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMSVFLL*STDEEQ
Trigger: CTGCTCTTCATCTGTGGATCAAAGGAGAAATACCGA...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCATTGCTGTTGTTCTTaGTACCGGCAGCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMHCCCS*YRQQFC
Trigger: GCAAAATTGCTGCCGGTATCAAGAACAACAGCAATG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACATGTAGATCTTGGATaGTGTGTTGATACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGHVDLG*CVDTVQ
Trigger: CTGGACTGTATCAACACAGCATCCAAGATCTACATG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR GCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCTGCTTCATTCACTTTaGAGAGCAGGTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMLLHSL*RAGSPT
Trigger: AGTTGGAGAACCTGCTCTGCAAAGTGAATGAAGCAG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR GCA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCATTCCAACAGCTCTTTaGGTGAAGCAAAAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLIPTAL*VKQKLS
Trigger: AGAAAGTTTTTGCTTCACGCAAAGAGCTGTTGGAAT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTTTTTCTTTACTaGGAGAGATGGTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGQLFLY*ERWSPQ
Trigger: TTGAGGAGACCATCTCTCCCAGTAAAGAAAAAGCTG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGTGGGATCTGCATGGTTaGCCAGAATGTTGTAACATC +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMWDLHG*PECCNI
Trigger: GATGTTACAACATTCTGGCCAACCATGCAGATCCCA...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR TCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAAAGTTCATCGTACTTaGCAGGCTTGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGKVHRT*QAWRKE
Trigger: TTCTTTTCTCCAAGCCTGTCAAGTACGATGAACTTT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CCA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAAACAGCGCAGAAACTaGATCAGAGTTTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGKQRRN*IRVSLS
Trigger: AGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR TCA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCAAAAACTTTCTGGATaGTTTTGGAGAGCTCATCGA +
Preference number: 4 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMQKLSG*FWRAHR
Trigger: TCGATGAGCTCTCCAAAATCATCCAGAAAGTTTTTG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS GCA 90 bp GCTCCCTGGTCCAGCCGGGTGCCCCTCAGCTGTGGCGTCACCATATaGACTGCTCCGGCCAGACACACTGTGCTCGCCAGCCACCGAGTC +
Preference number: 5 (lower is better)
Translates to: APWSSRVPLSCGVTI*TAPARHTVLASHRV
Trigger: GACTCGGTGGCTGGCGAGCACAGTGTGTCTGGCCGGAGCAGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp ACTGTGCTCGCCAGCCACCGAGTCCACTGCACTTCCCCCGCTCTCTaGGCCCACACTACCGCCATGGTCAGCTGGCGAGGTCCGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TVLASHRVHCTSPAL*AHTTAMVSWRGPQG
Trigger: ACCCTGCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGGCTCAGAGAGCGGGGGAAGTGCAGTGGACTCGGTGGCTGGCGAGCACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CTGATGGCGCCTGTGCTAGAGCTGACGCTCCCTGGTCCAGCCGGGTaGCCCTCAGCTGTGGCGTCACCATATGCACTGCTCCGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: LMAPVLELTLPGPAG*PSAVASPYALLRPD
Trigger: GTCTGGCCGGAGCAGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGGGAGCGTCAGCTCTAGCACAGGCGCCATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CCCAGTGGCGGTGCTGATGGCGCCTGTGCTAGAGCTGACGCTCCCTaGTCCAGCCGGGTGCCCCTCAGCTGTGGCGTCACCATATGCACT +
Preference number: 5 (lower is better)
Translates to: PSGGADGACARADAP*SSRVPLSCGVTICT
Trigger: AGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGGGAGCGTCAGCTCTAGCACAGGCGCCATCAGCACCGCCACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp CCTCCAGCTGGTCAGAATCCTTCGGGGGCGATGTTGTCATGCGGGTaGGCCAGGCCTGCAGGCGTACCGGCTCCACACACGCAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPAGQNPSGAMLSCG*ARPAGVPAPHTQAG
Trigger: CCCAGCTTGCGTGTGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCGCATGACAACATCGCCCCCGAAGGATTCTGACCAGCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CTGAGCCCACACTACCGCCATGGTCAGCTGGCGAGGTCCGCAGGGTaGAGCCGTCAGTTGCTGCAGTGCTGCCCTCGTCATCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSPHYRHGQLARSAG*SRQLLQCCPRHLRL
Trigger: CAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp GAGTCCACTGCACTTCCCCCGCTCTCTGAGCCCACACTACCGCCATaGTCAGCTGGCGAGGTCCGCAGGGTGGAGCCGTCAGTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: ESTALPPLSEPTLPP*SAGEVRRVEPSVAA
Trigger: TGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGGCTCAGAGAGCGGGGGAAGTGCAGTGGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TCAGAATCCTTCGGGGGCGATGTTGTCATGCGGGTGAGCCAGGCCTaGAGGCGTACCGGCTCCACACACGCAAGCTGGGCGAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SESFGGDVVMRVSQA*RRTGSTHASWAREP
Trigger: TGGCTCTCTCGCCCAGCTTGCGTGTGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCGCATGACAACATCGCCCCCGAAGGATTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GGAAGTCAAACCAGCGGGAGCGGCTCAGGTTCAGCTGCATGGTCCTaGCGAAGATCTCGATGTAGGACGGGGCCCGCTCGATGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GSQTSGSGSGSAAWS*RRSRCRTGPARWPA
Trigger: CGCAGGCCATCGAGCGGGCCCCGTCCTACATCGAGATCTTCGGCAGGACCATGCAGCTGAACCTGAGCCGCTCCCGCTGGTTTGACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GGATCCACGGAGGCACCGATGAAGAGGCTCAGCTTCCGGTCGGCCTaGAGGGCCTCCTCTCTGGTGAAGGGGAAGTCAAACCAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GSTEAPMKRLSFRSA*RASSLVKGKSNQRE
Trigger: CTCCCGCTGGTTTGACTTCCCCTTCACCAGAGAGGAGGCCCTGCAGGCCGACCGGAAGCTGAGCCTCTTCATCGGTGCCTCCGTGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GGGCCCCAGACCGGAAGGAGCCCATTGCACTTCGTGTTGGCGTTCTaGAGGGCAGCACTCTCCCACTCTTCCCGGCCTCTAGCCAACCTG +
Preference number: 5 (lower is better)
Translates to: GPQTGRSPLHFVLAF*RAALSHSSRPLANL
Trigger: CAGGTTGGCTAGAGGCCGGGAAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCACAGACGCCTGGGTaGGCGGGGACAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPQTPG*AGTEAL
Trigger: CAGTGCCTCTGTCCCCGCCAACCCAGGCGTCTGTGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTGGTAGGCCGAGCGGCTGCTGTGCAGACTGGCCAGGAGGCTCTTTaGTTGCTGCTGGACACTGGCAGGCGCTGGCAGGGAGAGCAACAA +
Preference number: 5 (lower is better)
Translates to: VVGRAAAVQTGQEAL*LLLDTGRRWQGEQQ
Trigger: TTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CAGCTGGCGAGGTCCGCAGGGTGGAGCCGTCAGTTGCTGCAGTGCTaGCCTCGTCATCTGAGGCTGGAGCTGATGCTGTGGTGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: QLARSAGWSRQLLQC*PRHLRLELMLWCQR
Trigger: TCTCTGACACCACAGCATCAGCTCCAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CCA 90 bp GCATGGTCCTGCCGAAGATCTCGATGTAGGACGGGGCCCGCTCGATaGCCTGCGTCCCAATCTGGATCCGCATGCCCGTCATCACCATGG +
Preference number: 5 (lower is better)
Translates to: AWSCRRSRCRTGPAR*PASQSGSACPSSPW
Trigger: CCATGGTGATGACGGGCATGCGGATCCAGATTGGGACGCAGGCCATCGAGCGGGCCCCGTCCTACATCGAGATCTTCGGCAGGACCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CCTGGTCCTTATGGCTGTGGTAGGCCGAGCGGCTGCTGTGCAGACTaGCCAGGAGGCTCTTTGATTGCTGCTGGACACTGGCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: PGPYGCGRPSGCCAD*PGGSLIAAGHWQAL
Trigger: CAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACCACAGCCATAAGGACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TTGTCGTCATGCCCAGAGTTCCCAGAGCCTTCTGCCTCATGGCCATaGCCATGCGCTTCTTCTCTGCCCGGGTCTCCCTGCGGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: LSSCPEFPEPSASWP*PCASSLPGSPCGLR
Trigger: ACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAACTCTGGGCATGACGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGGACAGTGCCACTGGTaGTGGCAGGGGCGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGEGQCHW*WQGRLS
Trigger: ACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGGGGTGGAGCCGTCAGTaGCTGCAGTGCTGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGEGWSRQ*LQCCPR
Trigger: ACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCC...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp TGGCTGCAGCGCCACGGCGGAGGTTGTAATCAAAGAGCTCTCGGATaGGGCCCTGGGAGACGAGGATGTGTCGCAGGGCTGGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: WLQRHGGGCNQRALG*GPGRRGCVAGLDWW
Trigger: CCACCAATCCAGCCCTGCGACACATCCTCGTCTCCCAGGGCCTCATCCGAGAGCTCTTTGATTACAACCTCCGCCGTGGCGCTGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp GGACTCCGCGTGCAGCTAGGTAGACCTTCCAGTGGCACGAGGCGATaGGCTTCTGGTAGAGAGCCAGGTACTCTGCAGCACACTCCCCCG +
Preference number: 5 (lower is better)
Translates to: GLRVQLGRPSSGTRR*ASGREPGTLQHTPP
Trigger: CGGGGGAGTGTGCTGCAGAGTACCTGGCTCTCTACCAGAAGCTCATCGCCTCGTGCCACTGGAAGGTCTACCTAGCTGCACGCGGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp TCATGCCCAGAGTTCCCAGAGCCTTCTGCCTCATGGCCATGGCCATaGGCTTCTTCTCTGCCCGGGTCTCCCTGCGGGCTGCGTCAATCT +
Preference number: 5 (lower is better)
Translates to: SCPEFPEPSASWPWP*ASSLPGSPCGLRQS
Trigger: AGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAACTCTGGGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp GAGCGGCTGCTGTGCAGACTGGCCAGGAGGCTCTTTGATTGCTGCTaGACACTGGCAGGCGCTGGCAGGGAGAGCAACAAAGTGGCTAGC +
Preference number: 5 (lower is better)
Translates to: ERLLCRLARRLFDCC*TLAGAGRESNKVAS
Trigger: GCTAGCCACTTTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp GAGTACCTGCCGCAGCCAGTTGTTGTGGCCCAGCTTGAGGTCAAGTaGGGTGGTCCTCTTCCCCCGCCGGCTCAGGAACTGTTTCCACCT +
Preference number: 5 (lower is better)
Translates to: EYLPQPVVVAQLEVK*GGPLPPPAQELFPP
Trigger: AGGTGGAAACAGTTCCTGAGCCGGCGGGGGAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CGTACCGGCTCCACACACGCAAGCTGGGCGAGAGAGCCACAGAGGTaGAGGAGGCTCGGGTTAGGGCTCTTCTCAGTCAGCTGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RTGSTHASWAREPQR*RRLGLGLFSVSWKS
Trigger: ACTCTTCCAGCTGACTGAGAAGAGCCCTAACCCGAGCCTCCTTCACCTCTGTGGCTCTCTCGCCCAGCTTGCGTGTGTGGAGCCGGTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GCACCAGGCGCCCAACAGCTGGAAGTTCTGGAAGTGCTCACCACCTaGGCGGCGGGAGCTGCTGATGGCCTGTCCAATCATGTCGTAGAT +
Preference number: 5 (lower is better)
Translates to: APGAQQLEVLEVLTT*AAGAADGLSNHVVD
Trigger: ATCTACGACATGATTGGACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTTGGGCGCCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CTATTAAGCAGGCACCAGGCGCCCAACAGCTGGAAGTTCTGGAAGTaGTCACCACCTGCGCGGCGGGAGCTGCTGATGGCCTGTCCAATC +
Preference number: 5 (lower is better)
Translates to: LLSRHQAPNSWKFWK*SPPARRELLMACPI
Trigger: GATTGGACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTTGGGCGCCTGGTGCCTGCTTAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GAGCTCAGGGAAGCCGGTCCCATCACCGTTCGCCAGCATATCTGTTaGCATGGGGGTCAGGGTGCCCAGAAGCACAGCACACACACCTTC +
Preference number: 5 (lower is better)
Translates to: ELREAGPITVRQHIC*HGGQGAQKHSTHTF
Trigger: GAAGGTGTGTGTGCTGTGCTTCTGGGCACCCTGACCCCCATGGCAACAGATATGCTGGCGAACGGTGATGGGACCGGCTTCCCTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GCACAGGCCTTCAGATGCTCCATCAGGCTGATGAGCGTGTCATACTaGAAAGCGGAGCCGGAACTGGCTGTGACCACACTGGCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: AQAFRCSIRLMSVSY*KAEPELAVTTLARR
Trigger: CCTCCGGGCCAGTGTGGTCACAGCCAGTTCCGGCTCCGCTTTGCAGTATGACACGCTCATCAGCCTGATGGAGCATCTGAAGGCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CGGCTGGGGACAGTAGCAAGAGCTTCCACGATGGTACAGGCTGCCTaGCTTGCTGCCTGTGTTGCTGGGGTAAAGAGTACCTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RLGTVARASTMVQAA*LAACVAGVKSTCRS
Trigger: GCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCTACTGTCCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CCAGTGGCACGAGGCGATGAGCTTCTGGTAGAGAGCCAGGTACTCTaGAGCACACTCCCCCGCAACGCTGAGCTCGTCCAGGTAACTGGT +
Preference number: 5 (lower is better)
Translates to: PVARGDELLVESQVL*STLPRNAELVQVTG
Trigger: ACCAGTTACCTGGACGAGCTCAGCGTTGCGGGGGAGTGTGCTGCAGAGTACCTGGCTCTCTACCAGAAGCTCATCGCCTCGTGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp GGCCATGGCCATGCGCTTCTTCTCTGCCCGGGTCTCCCTGCGGGCTaGGTCAATCTTCTTGTTCACATCTGGGTGTTCTCTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GHGHALLLCPGLPAG*VNLLVHIWVFSQGL
Trigger: GAGGCCCTGAGAGAACACCCAGATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp AAGAGGCTATTAAGCAGGCACCAGGCGCCCAACAGCTGGAAGTTCTaGAAGTGCTCACCACCTGCGCGGCGGGAGCTGCTGATGGCCTGT +
Preference number: 5 (lower is better)
Translates to: KRLLSRHQAPNSWKF*KCSPPARRELLMAC
Trigger: ACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTTGGGCGCCTGGTGCCTGCTTAATAGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp CCAGAGAGACCTGGACCTTCGAGACAGCGGCATCCAGGGTGTAGATaGACTGCAGACTGGGGATCTCATGCAGCTGGAGGACGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: PERPGPSRQRHPGCR*TADWGSHAAGGRQC
Trigger: GCACTGCCGTCCTCCAGCTGCATGAGATCCCCAGTCTGCAGTCCATCTACACCCTGGATGCCGCTGTCTCGAAGGTCCAGGTCTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp GTTCAACCATGGTCTCGTCGTCTGCATCAGGTGGGATGTCCAGCATaGGAGGAAAGCCTTCAGCACCTGCCAGCAGGGCCTCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: VQPWSRRLHQVGCPA*EESLQHLPAGPPGE
Trigger: CTCCCCTGGAGGCCCTGCTGGCAGGTGCTGAAGGCTTTCCTCCCATGCTGGACATCCCACCTGATGCAGACGACGAGACCATGGTTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TTTCGTTTGTCGTCATGCCCAGAGTTCCCAGAGCCTTCTGCCTCATaGCCATGGCCATGCGCTTCTTCTCTGCCCGGGTCTCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: FRLSSCPEFPEPSAS*PWPCASSLPGSPCG
Trigger: CCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAACTCTGGGCATGACGACAAACGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGAGGCGGGCGATTTCCTaGGTGATGAGGTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGERRAIS*VMRLPT
Trigger: CGTGGGCAACCTCATCACCAAGGAAATCGCCCGCCT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGGGATCAGGTGGATGTaGCTCTCACGGCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGGIRWM*LSRPPP
Trigger: TGGGGGCGGCCGTGAGAGCAACATCCACCTGATCCC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp TCTGGTGAGGAGGCACATGAGCTGGCGGACCTCCTCTCGAATGGCTaGAGCGCCACGGCGGAGGTTGTAATCAAAGAGCTCTCGGATGAG +
Preference number: 5 (lower is better)
Translates to: SGEEAHELADLLSNG*SATAEVVIKELSDE
Trigger: CTCATCCGAGAGCTCTTTGATTACAACCTCCGCCGTGGCGCTGCAGCCATTCGAGAGGAGGTCCGCCAGCTCATGTGCCTCCTCACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CTTGCGGCTGGGGACAGTAGCAAGAGCTTCCACGATGGTACAGGCTaGCTGCCTTGCTGCCTGTGTTGCTGGGGTAAAGAGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: LAAGDSSKSFHDGTG*LPCCLCCWGKEYLP
Trigger: CGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCTACTGTCCCCAGCCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp TCCCAGAGCCTTCTGCCTCATGGCCATGGCCATGCGCTTCTTCTCTaGCCGGGTCTCCCTGCGGGCTGCGTCAATCTTCTTGTTCACATC +
Preference number: 5 (lower is better)
Translates to: SQSLLPHGHGHALLL*PGLPAGCVNLLVHI
Trigger: GATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp AAGCTGATTCAGGGACATGGGGGCCCCAGACCGGAAGGAGCCCATTaGACTTCGTGTTGGCGTTCTGCAGGGCAGCACTCTCCCACTCTT +
Preference number: 5 (lower is better)
Translates to: KLIQGHGGPRPEGAH*TSCWRSAGQHSPTL
Trigger: AAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp GGACCTTCGAGACAGCGGCATCCAGGGTGTAGATGGACTGCAGACTaGGGATCTCATGCAGCTGGAGGACGGCAGTGCAGTCAATGGAGC +
Preference number: 5 (lower is better)
Translates to: GPSRQRHPGCRWTAD*GSHAAGGRQCSQWS
Trigger: GCTCCATTGACTGCACTGCCGTCCTCCAGCTGCATGAGATCCCCAGTCTGCAGTCCATCTACACCCTGGATGCCGCTGTCTCGAAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TGCTGTGCAGACTGGCCAGGAGGCTCTTTGATTGCTGCTGGACACTaGCAGGCGCTGGCAGGGAGAGCAACAAAGTGGCTAGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: CCADWPGGSLIAAGH*QALAGRATKWLAPE
Trigger: CTCAGGAGCTAGCCACTTTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGGGCTGCGAGCACTTaGCTGCCGCACAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRAAST*LPHRAQ
Trigger: CTGTGCTCTGTGCGGCAGCAAAGTGCTCGCAGCCCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GACTCTGGCCACACAGAGTCCCCAGGTGAGCAGCCTGCACGGCACTaGTGTAACTCTCGGACGGGATGGTGTCGTTGGCAAATGCATTGC +
Preference number: 5 (lower is better)
Translates to: DSGHTESPGEQPARH*CNSRTGWCRWQMHC
Trigger: GCAATGCATTTGCCAACGACACCATCCCGTCCGAGAGTTACATCAGTGCCGTGCAGGCTGCTCACCTGGGGACTCTGTGTGGCCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTGCCTGGCTTCACCATGACCACCAGAGGCACGCCAGTAGTCTGCTaGACACAACACACCAAGCCAGGGTGGTTCATCACCTCGGACCAC +
Preference number: 5 (lower is better)
Translates to: VPGFTMTTRGTPVVC*TQHTKPGWFITSDH
Trigger: GTGGTCCGAGGTGATGAACCACCCTGGCTTGGTGTGTTGTGTTCAGCAGACTACTGGCGTGCCTCTGGTGGTCATGGTGAAGCCAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp GCCATCCACCCCTCGGATAGGCAGGCACTTCTTCCAGGCTTCGTATaGTGCCTTGGGATCTCTCTTGAGCCACAGCTGAGCCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: AIHPSDRQALLPGFV*CLGISLEPQLSLGM
Trigger: CATGCCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAGAAGTGCCTGCCTATCCGAGGGGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CCTTCGTGGGCTGGAACTTGTACCCCTCCCTGCAGATGCAGCACGTaGGTCCCGGCTCCTCAATCAGCTCTTCCATCTGCTTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: PSWAGTCTPPCRCST*VPAPQSALPSASGV
Trigger: CACTCCTGAAGCAGATGGAAGAGCTGATTGAGGAGCCGGGACTCACGTGCTGCATCTGCAGGGAGGGGTACAAGTTCCAGCCCACGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTGGATGTTGCTCTCACGGCCGCCCCCACCGGTGTCTGCACTGAATaGCTGCTCCATGGCGAAGCGCAGGAAGAGCAGTTTGATGTCATG +
Preference number: 5 (lower is better)
Translates to: VDVALTAAPTGVCTE*LLHGEAQEEQFDVM
Trigger: CATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTGGGGGCGGCCGTGAGAGCAACATCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CCGGGGAATGAGGCTGCAGACCGTGGTGATGTAGTGCGTGGACAGTaGGACAAAGGAGGAGTAGAACGGCTCGTACTGCTTCTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: PGNEAADRGDVVRGQ*DKGGVERLVLLLVV
Trigger: CACCACGAGAAGCAGTACGAGCCGTTCTACTCCTCCTTTGTCGCACTGTCCACGCACTACATCACCACGGTCTGCAGCCTCATTCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp AAGAGCTTCCACGATGGTACAGGCTGCCTGCCTTGCTGCCTGTGTTaGTGGGGTAAAGAGTACCTGCCGCAGCCAGTTGTTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: KSFHDGTGCLPCCLC*WGKEYLPQPVVVAQ
Trigger: CTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp GGGGACAGTAGCAAGAGCTTCCACGATGGTACAGGCTGCCTGCCTTaGTGCCTGTGTTGCTGGGGTAAAGAGTACCTGCCGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GDSSKSFHDGTGCLP*CLCCWGKEYLPQPV
Trigger: AACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCTACTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp GCCAGGGTCCCAATGCCCTCATCACTGGACACCTGCTCCAGCTTATaGAGGCTCGTGATGGAGTCCGTTCCAATCAGAACCTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ARVPMPSSLDTCSSL*RLVMESVPIRTWVA
Trigger: TGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTGGGACCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GCCTCATGGCCATGGCCATGCGCTTCTTCTCTGCCCGGGTCTCCCTaGGGGCTGCGTCAATCTTCTTGTTCACATCTGGGTGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: ASWPWPCASSLPGSP*GLRQSSCSHLGVLS
Trigger: TGAGAGAACACCCAGATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp ATCTTGCCCTTCTCATGGCTAACAGCCAAATGCTGGCGGCGCCCATaGGGGGAAGAAAGCACACACATAGCCACCCGTCTCAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: ILPFSWLTAKCWRRP*GEESTHIATRLSTW
Trigger: CCACGTGCTGAGACGGGTGGCTATGTGTGTGCTTTCTTCCCCCCATGGGCGCCGCCAGCATTTGGCTGTTAGCCATGAGAAGGGCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CCAAAGAACTCACAACCAGCCTCTCCAGGACAGTGCCACTGGTTGTaGCAGGGGCGGCTGAGTCACTCTCTCCAGTGCCATTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PKNSQPASPGQCHWL*QGRLSHSLQCHCSG
Trigger: ACCAGAGCAATGGCACTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGGCTGGTTGTGAGTTCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CCA 90 bp TTAGGGCGTGTGACGGCAATGGAGCGAGCTGTGATCACCAGGCGCTaGAACACCTCGGGGTCCAAGTCCTTGCCTTCTTTGCTGGATGTG +
Preference number: 5 (lower is better)
Translates to: LGRVTAMERAVITRR*NTSGSKSLPSLLDV
Trigger: CACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGAGGTGTTCCAGCGCCTGGTGATCACAGCTCGCTCCATTGCCGTCACACGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp GTGGAGGAGGTGTGGCCACAGCCTAAGACAGACAAAGCACGGTACTaGCTGGCAGTAAACGTGGGCTGGACAGACGTCCGGGATGACTTG +
Preference number: 5 (lower is better)
Translates to: VEEVWPQPKTDKARY*LAVNVGWTDVRDDL
Trigger: CAAGTCATCCCGGACGTCTGTCCAGCCCACGTTTACTGCCAGCCAGTACCGTGCTTTGTCTGTCTTAGGCTGTGGCCACACCTCCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp AGCTTCCACGATGGTACAGGCTGCCTGCCTTGCTGCCTGTGTTGCTaGGGTAAAGAGTACCTGCCGCAGCCAGTTGTTGTGGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SFHDGTGCLPCCLCC*GKEYLPQPVVVAQL
Trigger: AAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp GTGTTGTGCCTTGCTAAGCAAGTGGCGAAAGCTGATTCAGGGACATaGGGGCCCCAGACCGGAAGGAGCCCATTGCACTTCGTGTTGGCG +
Preference number: 5 (lower is better)
Translates to: VLCLAKQVAKADSGT*GPQTGRSPLHFVLA
Trigger: CGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGCTTTCGCCACTTGCTTAGCAAGGCACAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp ATGGCGAAGCGCAGGAAGAGCAGTTTGATGTCATGGATGTTGAGCTaGTACGTGGGCTCCCGCTGGCCGGTACACTCCTGGAGGTACGTG +
Preference number: 5 (lower is better)
Translates to: MAKRRKSSLMSWMLS*YVGSRWPVHSWRYV
Trigger: CACGTACCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTGCCAGGCCCCAGTTaGGGAGAGCCCACTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVLPGPS*GEPTPS
Trigger: GGAGGGAGTGGGCTCTCCCAAACTGGGGCCTGGCAA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTTAGGAGGGCAGATGTaGCTGACTGAGGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGELGGQM*LTEAEG
Trigger: CCCTTCTGCCTCAGTCAGCAACATCTGCCCTCCTAA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGAGGGCTGCGAGCACTTaGCTGCCGCACAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMRAAST*LPHRAQ
Trigger: CTGTGCTCTGTGCGGCAGCAAAGTGCTCGCAGCCCT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCCACAGACGCCTGGGTaGGCGGGGACAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREPQTPG*AGTEAL
Trigger: CAGTGCCTCTGTCCCCGCCAACCCAGGCGTCTGTGG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCTGCCGCAGCCAGTTGTaGTGGCCCAGCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPCRSQL*WPSLRS
Trigger: TGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCA...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTACAGGCTGCCTGCCTaGCTGCCTGTGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMYRLPA*LPVLLG
Trigger: CCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGCTGTCCTTGCTCTCTaGCTCGGCTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFAVLAL*LGYQSQ
Trigger: CTGGCTCTGGTAGCCGAGCAAGAGAGCAAGGACAGC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGGAGGAGGTTGCCCTaGTCCTCACTCAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRRRLP*SSLRGS
Trigger: AGAGCCCCTGAGTGAGGACAAGGGCAACCTCCTCCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTTCTCCTCCCGGGACGTaGCTCGGGTCGTGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLSPPGT*LGSCSG
Trigger: TCCTGAACACGACCCGAGCAACGTCCCGGGAGGAGA...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCTCCTCCCGGGACGTaGCTCGGGTCGTGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSPPGT*LGSCSG
Trigger: TCCTGAACACGACCCGAGCAACGTCCCGGGAGGAGA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GCTGAGCCTGGGCATGGATCTCATTGCAGTACGGTTTCACTGTGGTaGGGGCCTCCACGGGGACATCCTTGTTCTTCTTGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: AEPGHGSHCSTVSLW*GPPRGHPCSSCWLG
Trigger: CCCCAACCAGCAAGAAGAACAAGGATGTCCCCGTGGAGGCCCTCACCACAGTGAAACCGTACTGCAATGAGATCCATGCCCAGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CCACCTCCACACGTACTTCTCGGTCAAGTAGAGACGGTGGAGCTCTaGCTTGCTGGGGGATTTCCCATTGCCATCCACCCCTCGGATAGG +
Preference number: 5 (lower is better)
Translates to: PPPHVLLGQVETVEL*LAGGFPIAIHPSDR
Trigger: CCTATCCGAGGGGTGGATGGCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCTCTACTTGACCGAGAAGTACGTGTGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CAATGCCCTCATCACTGGACACCTGCTCCAGCTTATGCAGGCTCGTaGTGGAGTCCGTTCCAATCAGAACCTGGGTGGCAGGGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: QCPHHWTPAPAYAGS*WSPFQSEPGWQGAA
Trigger: TGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GGGACGTTGCTCGGGTCGTGTTCAGGACGTAAAGCACAGTGTGAATaGTGTATGGGATCAGGTGGATGTTGCTCTCACGGCCGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: GTLLGSCSGRKAQCE*CMGSGGCCSHGRPH
Trigger: GTGGGGGCGGCCGTGAGAGCAACATCCACCTGATCCCATACATCATTCACACTGTGCTTTACGTCCTGAACACGACCCGAGCAACGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CTCAGGGTCTTTGCGGCTGGCCAAGATGTTGCCCTTCTCACCAGATaGCTGCTTATTGGGGCTTTTAACCCGAGGAGAGCTCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LRVFAAGQDVALLTR*LLIGAFNPRRALQG
Trigger: CCCCTGGAGAGCTCTCCTCGGGTTAAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CCCCACCATCAGAGAAGAACTCCTCCATGGCCTTCCGGGCCTGGCTaGTCTCCAGCTGCTTCTCCAGATACTGTAAACACTCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PHHQRRTPPWPSGPG*SPAASPDTVNTPPG
Trigger: TCCTGGAGGAGTGTTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCATGGAGGAGTTCTTCTCTGATGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CTGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATTGGAGTGTTaGTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCGCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LRHRHHRRPCLPLEC*FEGRRATSRVSACS
Trigger: GGAACAAGCGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp ATCTCCAGCAGCATGTCCTGGGTCTCGTCGATGAGCTTGGTCCTCTaGAGCACCAGCTTCCGCAAGCACAGGTACCCATTCAGCACAGTG +
Preference number: 5 (lower is better)
Translates to: ISSSMSWVSSMSLVL*STSFRKHRYPFSTV
Trigger: CACTGTGCTGAATGGGTACCTGTGCTTGCGGAAGCTGGTGCTGCAGAGGACCAAGCTCATCGACGAGACCCAGGACATGCTGCTGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp ATGTTGCTCTCACGGCCGCCCCCACCGGTGTCTGCACTGAATGACTaGTCCATGGCGAAGCGCAGGAAGAGCAGTTTGATGTCATGGATG +
Preference number: 5 (lower is better)
Translates to: MLLSRPPPPVSALND*SMAKRRKSSLMSWM
Trigger: CATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTGGGGGCGGCCGTGAGAGCAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp AGCGGTGCAGTGCGCATCTGCACCTCCATGTTAACACTCAGCTCCTaGATGCTCTGCACAAGCATGGTCAAGATGGCTCTGCGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SGAVRICTSMLTLSS*MLCTSMVKMALRPF
Trigger: GAAGGGCCGCAGAGCCATCTTGACCATGCTTGTGCAGAGCATCCAGGAGCTGAGTGTTAACATGGAGGTGCAGATGCGCACTGCACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp ATGCCTCAGAATCCAGCCGGTTCAAATCCTCCTCAGAGGCCTCTGTaGACAGGACGCAGTAGAACCTGGGTTGTGGGGCCGCATCTGATG +
Preference number: 5 (lower is better)
Translates to: MPQNPAGSNPPQRPL*TGRSRTWVVGPHLM
Trigger: CATCAGATGCGGCCCCACAACCCAGGTTCTACTGCGTCCTGTCCACAGAGGCCTCTGAGGAGGATTTGAACCGGCTGGATTCTGAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TCCAGCTTATGCAGGCTCGTGATGGAGTCCGTTCCAATCAGAACCTaGGTGGCAGGGTGCTGCATGGCCAGACCCCGAAGAAGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SSLCRLVMESVPIRT*VAGCCMARPRRSLK
Trigger: TTTGAGGCTTCTTCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCTGCATAAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp AATGACTGCTCCATGGCGAAGCGCAGGAAGAGCAGTTTGATGTCATaGATGTTGAGCTGGTACGTGGGCTCCCGCTGGCCGGTACACTCC +
Preference number: 5 (lower is better)
Translates to: NDCSMAKRRKSSLMS*MLSWYVGSRWPVHS
Trigger: GGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TGCTCGGGTCGTGTTCAGGACGTAAAGCACAGTGTGAATGATGTATaGGATCAGGTGGATGTTGCTCTCACGGCCGCCCCCACCGGTGTC +
Preference number: 5 (lower is better)
Translates to: CSGRVQDVKHSVNDV*DQVDVALTAAPTGV
Trigger: GACACCGGTGGGGGCGGCCGTGAGAGCAACATCCACCTGATCCCATACATCATTCACACTGTGCTTTACGTCCTGAACACGACCCGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp AAGGCACTCTCTGTCCACTTCTCTTTGGGCTGTTCCAGGAAGCCTTaGAGGTTCTTCTCCTCCCGGGACGTTGCTCGGGTCGTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KALSVHFSLGCSRKP*RFFSSRDVARVVFR
Trigger: CCTGAACACGACCCGAGCAACGTCCCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGAGAGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTCCTTCTCTTTCCCCTaGTCAGCCAGGGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMSFSFP*SARAVG
Trigger: CCCCACAGCCCTGGCTGACAAGGGGAAAGAGAAGGA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCAGCCGTTGAATCCTTaGTGTGGAGGTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGQPLNP*CGGALG
Trigger: GCCCAGAGCACCTCCACACAAAGGATTCAACGGCTG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCGGCTGGCCAAGATGTaGCCCTTCTCACCAGATGCC +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMRLAKM*PFSPDA
Trigger: GGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCTGTCTTGGGATCCACTaGCCCACCCAAAAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPCLGIH*PTQKGD
Trigger: GTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGACA...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGCGGCTGCTGCTGTCTaGGGATCCACTTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYAAAAV*GSTCPP
Trigger: GGGTGGGCAAGTGGATCCCAAGACAGCAGCAGCCGC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTCATCCAGCCCACTGTaGGGATCTGCATGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSSSPL*GSAWLA
Trigger: GGCCAACCATGCAGATCCCAACAGTGGGCTGGATGA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTGTGACAGGTATTTCTaGCATCTGCCCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGECDRYF*HLPSQS
Trigger: GGACTGGCTGGGCAGATGCAAGAAATACCTGTCACA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTGGCCAGGAGGCTCTTaGATTGCTGCTGGACACTGG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFWPGGS*IAAGHW
Trigger: CCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCGTCACGTGTCTCCGCTaGTTCCTGGGCCTTAGGACT +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPVTCLR*FLGLRT
Trigger: AGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGAC...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGGTGGAGCCGTCAGTaGCTGCAGTGCTGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRGWSRQ*LQCCPR
Trigger: ACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGCTGTGCAAGCAGGTaGTCCAGGGCTCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSCASR*SRAPLS
Trigger: AGACAAGGGAGCCCTGGACAACCTGCTTGCACAGCT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCATCGTCCGCACCATCTaGGTTCGCTTCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPIVRTI*VRFRSP
Trigger: TGGGGACCTGAAGCGAACCAAGATGGTGCGGACGAT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCGGTGGAGCTCTGACTaGCTGGGGGATTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFRWSSD*LGDFPL
Trigger: CAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGTTGTGGCCCAGCTaGAGGTCAAGTGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGLLWPS*RSSGVV
Trigger: GACCACCCCACTTGACCTCAAGCTGGGCCACAACAA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCAAGGACCTGCTGCTaGCGGCTGGGGACAGTAGCA +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSRTCC*RLGTVA
Trigger: TGCTACTGTCCCCAGCCGCAAGCAGCAGGTCCTTGA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGGCGGGCGATTTCCTaGGTGATGAGGTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHRRAIS*VMRLPT
Trigger: CGTGGGCAACCTCATCACCAAGGAAATCGCCCGCCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGTCTCGTCGATGAGCTaGGTCCTCTGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHVSSMS*VLCSTS
Trigger: GCTGGTGCTGCAGAGGACCAAGCTCATCGACGAGAC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGTTGATGTCATGGATGTaGAGCTGGTACGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGELMSWM*SWYVGS
Trigger: GGAGCCCACGTACCAGCTCAACATCCATGACATCAA...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGGATCAGGTGGATGTaGCTCTCACGGCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRGIRWM*LSRPPP
Trigger: TGGGGGCGGCCGTGAGAGCAACATCCACCTGATCCC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CACATGCCTCGTCAGGGTTCTCCAGACGCAGGAGGGAAAACTCAATaGGAACTTTACAGGCAGCTGCCACCGACTGAAGCTGGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: HMPRQGSPDAGGKTQ*ELYRQLPPTEAGSG
Trigger: CCCGGAACCAGCTTCAGTCGGTGGCAGCTGCCTGTAAAGTTCTCATTGAGTTTTCCCTCCTGCGTCTGGAGAACCCTGACGAGGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CTGGGTTCATCTCATCTGACCACACAATCAGATCCCCAGTCAACCTaGCCAGGGAGAGGAGGGTATGTTTCAGGGAAGCCGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LGSSHLTTQSDPQST*PGRGGYVSGKPPGA
Trigger: TGCCCCTGGCGGCTTCCCTGAAACATACCCTCCTCTCCCTGGTCAGGTTGACTGGGGATCTGATTGTGTGGTCAGATGAGATGAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CGATGTACGTGGTCAGTAACTGCAGCAGCTGCCGGTTCTCCTGAATaGCCTCCAGCTGGTCAGAATCCTTCGGGGGCGATGTTGTCATGC +
Preference number: 5 (lower is better)
Translates to: RCTWSVTAAAAGSPE*PPAGQNPSGAMLSC
Trigger: GCATGACAACATCGCCCCCGAAGGATTCTGACCAGCTGGAGGTCATTCAGGAGAACCGGCAGCTGCTGCAGTTACTGACCACGTACATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp TCTCCATGGTCCACCTCACTCTGTTCCTGGCTTTCCTGGCGGATGTaGCCACCATCGGGGATGCCCGATGACTGCATTTTCTCATCTGCG +
Preference number: 5 (lower is better)
Translates to: SPWSTSLCSWLSWRM*PPSGMPDDCIFSSA
Trigger: CGCAGATGAGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAAAGCCAGGAACAGAGTGAGGTGGACCATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp GAGCCAGCTGCAGGATGTAGCGATTCACACTGGCTGAAGTGGAGCTaGTGCCTCCCGCTGTTCCTGAGTCTTCCTGTGGCTTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: EPAAGCSDSHWLKWS*CLPLFLSLPVAFLE
Trigger: CTCCAGAAAAGCCACAGGAAGACTCAGGAACAGCGGGAGGCATCAGCTCCACTTCAGCCAGTGTGAATCGCTACATCCTGCAGCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp GAAGACCTGCTGCGTCGAGGAACTCCGAGAAGGTCTCCACTGGCATaGACTCCTCCTGGAAGGTTTTCAGGGCTTTGTCGGCAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: EDLLRRGTPRRSPLA*TPPGRFSGLCRQLR
Trigger: ACGAAGCTGCCGACAAAGCCCTGAAAACCTTCCAGGAGGAGTTCATGCCAGTGGAGACCTTCTCGGAGTTCCTCGACGCAGCAGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CTCCAGACGCAGGAGGGAAAACTCAATGAGAACTTTACAGGCAGCTaGCACCGACTGAAGCTGGTTCCGGGGAATGAGGCTGCAGACCGT +
Preference number: 5 (lower is better)
Translates to: LQTQEGKLNENFTGS*HRLKLVPGNEAADR
Trigger: ACGGTCTGCAGCCTCATTCCCCGGAACCAGCTTCAGTCGGTGGCAGCTGCCTGTAAAGTTCTCATTGAGTTTTCCCTCCTGCGTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp TCAGATGACTTATGGGGGTCGGTCTCTGCGGCCATCTTAGAGAAGTaGTCATCCAGAGAGACCTGGACCTTCGAGACAGCGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: SDDLWGSVSAAILEK*SSRETWTFETAASR
Trigger: CCTGGATGCCGCTGTCTCGAAGGTCCAGGTCTCTCTGGATGAGCACTTCTCTAAGATGGCCGCAGAGACCGACCCCCATAAGTCATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GAGAAGAACTCCTCCATGGCCTTCCGGGCCTGGCTGCTCTCCAGCTaGTTCTCCAGATACTGTAAACACTCCTCCAGGATGGACTCATCC +
Preference number: 5 (lower is better)
Translates to: EKNSSMAFRAWLLSS*FSRYCKHSSRMDSS
Trigger: GGATGAGTCCATCCTGGAGGAGTGTTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCATGGAGGAGTTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TCCCATCACCGTTCGCCAGCATATCTGTTGCCATGGGGGTCAGGGTaGCCAGAAGCACAGCACACACACCTTCTCCAACTTGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SHHRSPAYLLPWGSG*PEAQHTHLLQLGCS
Trigger: AGAACAGCCAAGTTGGAGAAGGTGTGTGTGCTGTGCTTCTGGGCACCCTGACCCCCATGGCAACAGATATGCTGGCGAACGGTGATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GGGGAAGAGCTGCAACACCTCCAGGGTGCTCCTGCTGACAGTGGCTaGAAAGGACCTGCCCTGACTGTAGCTGAAGAAAAGCATCTGCAA +
Preference number: 5 (lower is better)
Translates to: GEELQHLQGAPADSG*KGPALTVAEEKHLQ
Trigger: TTGCAGATGCTTTTCTTCAGCTACAGTCAGGGCAGGTCCTTTGCAGCCACTGTCAGCAGGAGCACCCTGGAGGTGTTGCAGCTCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CGCAGGCTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTTGCTaGTCATTGCAGGCAGTGTGCCTAATGGCAACCATGTCTTGGATC +
Preference number: 5 (lower is better)
Translates to: RRLPSSHSRIMVVRC*SLQAVCLMATMSWI
Trigger: GATCCAAGACATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp ATCCGCAGGCTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTTaGTGCTCATTGCAGGCAGTGTGCCTAATGGCAACCATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: IRRLPSSHSRIMVVR*CSLQAVCLMATMSW
Trigger: CCAAGACATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCGGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GGGATGGCCCGGACACCTCCGACATTCCGTAACTGGGGCAGTGTCTaGAGCAATCTTTCCAACAGCATCAGACGAACCATGTGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: GMARTPPTFRNWGSV*SNLSNSIRRTMCSL
Trigger: CAGGCTACACATGGTTCGTCTGATGCTGTTGGAAAGATTGCTGCAGACACTGCCCCAGTTACGGAATGTCGGAGGTGTCCGGGCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GACAGTAGCAAGAGCTTCCACGATGGTACAGGCTGCCTGCCTTGCTaGCTGTGTTGCTGGGGTAAAGAGTACCTGCCGCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: DSSKSFHDGTGCLPC*LCCWGKEYLPQPVV
Trigger: AACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp GCCCAATGCCTGGTTCATTGCTGCTATATGGGTTTCCGGGCATCCTaGCCTGTAGAAAGTCCTCTTGCTGGGGGTCCTTCTCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AQCLVHCCYMGFRAS*PVESPLAGGPSPGS
Trigger: TGACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAACCCATATAGCAGCAATGAACCAGGCATTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp TACAGGGGCCAAGGGCCTTCGGAGAAAGGAGCAACTCCCAGCTGCTaGAGCAGTGTATTCTGCAGGTTTGGGGACTGTAGGTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: YRGQGPSEKGATPSC*SSVFCRFGDCRSEV
Trigger: GACTTCTGACCTACAGTCCCCAAACCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGCTCCTTTCTCCGAAGGCCCTTGGCCCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp ACTCCTCCTGGAAGGTTTTCAGGGCTTTGTCGGCAGCTTCGTAGATaGGCATGTCATTGTGGCGGATGTACTCGGCCAGAGAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: TPPGRFSGLCRQLRR*ACHCGGCTRPESRT
Trigger: GGTCCTGCTCTCTGGCCGAGTACATCCGCCACAATGACATGCCCATCTACGAAGCTGCCGACAAAGCCCTGAAAACCTTCCAGGAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TTAGGGACTCAGTTTCAGAACTCTCCAGGACAGTGCCACTGGTTGTaGCAGGGGCGGCTGAGTCACTCTCTCCAGTGCCATTGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGTQFQNSPGQCHWL*QGRLSHSLQCHCSG
Trigger: ACCAGAGCAATGGCACTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGTTCTGAAACTGAGTCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCGGAACCCCCAAGCTCTaGAAGGCTAGCCACATTCTG +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGGTPKL*KASHIL
Trigger: CAGAATGTGGCTAGCCTTCAAGAGCTTGGGGGTTCC...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGGACCCTGTCCGCACTaGCTGGGCACTACCCACATG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYGPCPH*LGTTHM
Trigger: CATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTCTGTCTCCCAGCCCTaGTGGAGTGCCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRESVSQP*WSASTC
Trigger: GCAGGTGGAGGCACTCCACAAGGGCTGGGAGACAGA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGACATCAGGGTCACCTaGGGCTCCAGCTTTATGCTG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFDIRVT*GSSFML
Trigger: CAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGTGTCTTGGGATCCACTaGCCCACCCAAAAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMCLGIH*PTQKGD
Trigger: GTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGACA...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCGGCTGCTGCTGTCTaGGGATCCACTTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEAAAAV*GSTCPP
Trigger: GGGTGGGCAAGTGGATCCCAAGACAGCAGCAGCCGC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGTGTGGTTTCAGCAGTaGGCTGGCAGCCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVVWFQQ*AGSHRL
Trigger: GAGCCTGTGGCTGCCAGCCAACTGCTGAAACCACAC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCAGAACTTCTGCCAGTaGATGGTTCGCTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRQNFCQ*MVRWAA
Trigger: TGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGGACTGAGTTGTGGCTaGTCCAGAACTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHGLSCG*SRTGCR
Trigger: CCTGCAGCCAGTTCTGGACAAGCCACAACTCAGTCC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGAACGGCACCTCAGGATaGTTACACACCAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRNGTSG*LHTRQG
Trigger: CCCCTGCCTGGTGTGTAACAATCCTGAGGTGCCGTT...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGACGTCCGGGATGACTaGGTGGCTGCTTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHDVRDD*VAASLC
Trigger: GCAAAGAGAAGCAGCCACCAAGTCATCCCGGACGTC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCTGGGGGATTTCCCATaGCCATCCACCCCTCGGATA +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMLGDFP*PSTPRI
Trigger: TATCCGAGGGGTGGATGGCAATGGGAAATCCCCCAG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTAGGCCTGTGAGACTCTaGAGGGCATATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLRPVRL*RAYPCC
Trigger: GCAGCAGGGATATGCCCTCAAGAGTCTCACAGGCCT...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGTGTTCGTCTCCAGCTaGACCAGCTGCTGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVVFVSS*TSCCRL
Trigger: CAACCGGCAGCAGCTGGTCAAGCTGGAGACGAACAC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGCTGTCCTTGCTCTCTaGCTCGGCTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVAVLAL*LGYQSQ
Trigger: CTGGCTCTGGTAGCCGAGCAAGAGAGCAAGGACAGC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTGCTGCTTCCGGGGCTaGTTCTCCATCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRCCFRG*FSISSK
Trigger: CTTGGAGGAGATGGAGAACAAGCCCCGGAAGCAGCA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp TTGGAGCTTGTGGACCCTGTCCGCACTTGCTGGGCACTACCCACATaGAGGATGGCCATACACGTGGCTACACTCACACCTGCATACAGA +
Preference number: 5 (lower is better)
Translates to: LELVDPVRTCWALPT*RMAIHVATLTPAYR
Trigger: TCTGTATGCAGGTGTGAGTGTAGCCACGTGTATGGCCATCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCACAAGCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTTTGGGAGAGCCCACTCCCTCCTTTGTACGAGAAAGGATGTCTCTaGCGCGAAGGGCAGCCAATGGGTCCTTCTCTTTCCCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VWESPLPPLYEKGCL*REGQPMGPSLSPCQ
Trigger: CTGACAAGGGGAAAGAGAAGGACCCATTGGCTGCCCTTCGCGTCAGAGACATCCTTTCTCGTACAAAGGAGGGAGTGGGCTCTCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CCATCTGTCTCCCAGCCCTTGTGGAGTGCCTCCACCTGCAAGTCTTaGAAGAGAGACGCCAGCAGCTTGATGGCATGGTTTGCCAGTATC +
Preference number: 5 (lower is better)
Translates to: PSVSQPLWSASTCKS*KRDASSLMAWFASI
Trigger: GATACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGGGAGACAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CATCAGACTCCGCAGGTCCCAAGATGCGCTCCAGAGAGTTACTGCTaGTCTCAGCAGCGCTCTCTGTGCTTGACTCCAAGAGAAGCGGTA +
Preference number: 5 (lower is better)
Translates to: HQTPQVPRCAPESYC*SQQRSLCLTPREAV
Trigger: TACCGCTTCTCTTGGAGTCAAGCACAGAGAGCGCTGCTGAGATCAGCAGTAACTCTCTGGAGCGCATCTTGGGACCTGCGGAGTCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp GGACCTGCCCTGACTGTAGCTGAAGAAAAGCATCTGCAACACGTGTaGGTAGTACACAGACACGCCACCGCCTGCCACCTGGCTGTTACT +
Preference number: 5 (lower is better)
Translates to: GPALTVAEEKHLQHV*VVHRHATACHLAVT
Trigger: AGTAACAGCCAGGTGGCAGGCGGTGGCGTGTCTGTGTACTACTCACACGTGTTGCAGATGCTTTTCTTCAGCTACAGTCAGGGCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp AGTGCCATTGCTCTGGTTCAGGTTAGGAGGGCAGATGTTGCTGACTaGGGCAGAAGGGAAGTCTTCTGGGGGCTCATCAGGCCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SAIALVQVRRADVAD*GRREVFWGLIRPAK
Trigger: TTTGGCTGGCCTGATGAGCCCCCAGAAGACTTCCCTTCTGCCTCAGTCAGCAACATCTGCCCTCCTAACCTGAACCAGAGCAATGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp ACACTGGCAGGCGCTGGCAGGGAGAGCAACAAAGTGGCTAGCTCCTaGGCGGCATGCTTGTTTCTCTCCTTCTCAATGATTGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: TLAGAGRESNKVASS*AACLFLSFSMIGPT
Trigger: TGTTGGCCCAATCATTGAGAAGGAGAGAAACAAGCATGCCGCTCAGGAGCTAGCCACTTTGTTGCTCTCCCTGCCAGCGCCTGCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp GTTTCTGTAGATGTGCAGTGTCAGGCAGTGGGCCTGCCAGCGCACTaGGGACGAGTTGGACTCCAACAGGAAACAGCGCAGAAACTGGAT +
Preference number: 5 (lower is better)
Translates to: VSVDVQCQAVGLPAH*GRVGLQQETAQKLD
Trigger: ATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCACATCTACAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CAGCCTTCCGGCCGTAAGCTGGCAATTCCGGCCAGATGGACCACATaGGATCTAGCAAGAGCTCCTGCTGAGCCTTGTTGGAGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QPSGRKLAIPARWTT*DLARAPAEPCWSFC
Trigger: ACAGAAACTCCAACAAGGCTCAGCAGGAGCTCTTGCTAGATCTCATGTGGTCCATCTGGCCGGAATTGCCAGCTTACGGCCGGAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp ATGTACAGGGGCCAAGGGCCTTCGGAGAAAGGAGCAACTCCCAGCTaGTGGAGCAGTGTATTCTGCAGGTTTGGGGACTGTAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: MYRGQGPSEKGATPS*WSSVFCRFGDCRSE
Trigger: TTCTGACCTACAGTCCCCAAACCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGCTCCTTTCTCCGAAGGCCCTTGGCCCCTGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp TTCAGGCATTCAGGGACATCAGGGTCACCTTGGGCTCCAGCTTTATaGTGCCAGATAAGCAGGAGGCGAGAAAGCACAGAGAGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: FRHSGTSGSPWAPAL*CQISRRRESTERPW
Trigger: CCAAGGCCTCTCTGTGCTTTCTCGCCTCCTGCTTATCTGGCAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTCCCTGAATGCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GAAGCCAAGCGGGTTAGCGTCAGCTTCCTCTTACTGGAATCTGCTTaGTTCAGGAGCGCTGAGAGCTGCAGCACTGTGATCTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: EAKRVSVSFLLLESA*FRSAESCSTVILPF
Trigger: GAAGGGCAAGATCACAGTGCTGCAGCTCTCAGCGCTCCTGAAGCAAGCAGATTCCAGTAAGAGGAAGCTGACGCTAACCCGCTTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TCTGCTCCTTCTGTTTCCATCTGGGGCAGCTTTGACTCGGTGAAGTaGACAAGGTTGTTAGGGCGTGTGACGGCAATGGAGCGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SAPSVSIWGSFDSVK*TRLLGRVTAMERAV
Trigger: CACAGCTCGCTCCATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TCCTCCAGCAGCTTCTTGATCCCACGCACATGGGAGTCCAGGGTGTaGAGGTCTCGGAGCTGTCGGTATTTCTCCTTTGATCCACAGATG +
Preference number: 5 (lower is better)
Translates to: SSSSFLIPRTWESRV*RSRSCRYFSFDPQM
Trigger: CATCTGTGGATCAAAGGAGAAATACCGACAGCTCCGAGACCTGCACACCCTGGACTCCCATGTGCGTGGGATCAAGAAGCTGCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CTGCTATATGGGTTTCCGGGCATCCTGCCCTGTAGAAAGTCCTCTTaGTGGGGGTCCTTCTCCAGGGTCACGAAGAACTCCGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LLYGFPGILPCRKSS*WGSFSRVTKNSVTS
Trigger: TGAAGTCACGGAGTTCTTCGTGACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAACCCATATAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CTCGTGATGGAGTCCGTTCCAATCAGAACCTGGGTGGCAGGGTGCTaGATGGCCAGACCCCGAAGAAGCCTCAAAATAAATGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LVMESVPIRTWVAGC*MARPRRSLKINGRA
Trigger: TGCTCTGCCATTTATTTTGAGGCTTCTTCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp AGGCTCGTGATGGAGTCCGTTCCAATCAGAACCTGGGTGGCAGGGTaGTGCATGGCCAGACCCCGAAGAAGCCTCAAAATAAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: RLVMESVPIRTWVAG*CMARPRRSLKINGR
Trigger: TCTGCCATTTATTTTGAGGCTTCTTCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CGTGAGTCCCGGCTCCTCAATCAGCTCTTCCATCTGCTTCAGGAGTaGAGTCTTGGTCACCACCTGACCCTTTTCGTTTGTCGTCATGCC +
Preference number: 5 (lower is better)
Translates to: RESRLLNQLFHLLQE*SLGHHLTLFVCRHA
Trigger: GGCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGATTGAGGAGCCGGGACTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp GCAGACTGGGGATCTCATGCAGCTGGAGGACGGCAGTGCAGTCAATaGAGCAGAAGGACGAGATCTGTCGGGCAAAGTACTCCTCTACAA +
Preference number: 5 (lower is better)
Translates to: ADWGSHAAGGRQCSQ*SRRTRSVGQSTPLQ
Trigger: TTGTAGAGGAGTACTTTGCCCGACAGATCTCGTCCTTCTGCTCCATTGACTGCACTGCCGTCCTCCAGCTGCATGAGATCCCCAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCGCTTGTTCCTaGGCCTTAGGACTCGAATCAGAGCTTGTTTACAGGAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: CFEGRRATSRVSACS*ALGLESELVYRRSS
Trigger: TGAGCTTCTCCTGTAAACAAGCTCTGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TTTCTCATCTGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATTaGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCG +
Preference number: 5 (lower is better)
Translates to: FLICVIVIIVVLVSH*SVASRGGGQRHVSP
Trigger: CGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAGATGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp ACCTGCATGTATGGGATGGCCCGGACACCTCCGACATTCCGTAACTaGGGCAGTGTCTGCAGCAATCTTTCCAACAGCATCAGACGAACC +
Preference number: 5 (lower is better)
Translates to: TCMYGMARTPPTFRN*GSVCSNLSNSIRRT
Trigger: GGTTCGTCTGATGCTGTTGGAAAGATTGCTGCAGACACTGCCCCAGTTACGGAATGTCGGAGGTGTCCGGGCCATCCCATACATGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TGTGCAGTGTCAGGCAGTGGGCCTGCCAGCGCACTGAGGACGAGTTaGACTCCAACAGGAAACAGCGCAGAAACTGGATCAGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: CAVSGSGPASALRTS*TPTGNSAETGSEFL
Trigger: AAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp CCTAAGACAGACAAAGCACGGTACTGGCTGGCAGTAAACGTGGGCTaGACAGACGTCCGGGATGACTTGGTGGCTGCTTCTCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: PKTDKARYWLAVNVG*TDVRDDLVAASLCC
Trigger: ACAGCAAAGAGAAGCAGCCACCAAGTCATCCCGGACGTCTGTCCAGCCCACGTTTACTGCCAGCCAGTACCGTGCTTTGTCTGTCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp AGCAGTTTGATGTCATGGATGTTGAGCTGGTACGTGGGCTCCCGCTaGCCGGTACACTCCTGGAGGTACGTGTTGTGCCTTGCTAAGCAA +
Preference number: 5 (lower is better)
Translates to: SSLMSWMLSWYVGSR*PVHSWRYVLCLAKQ
Trigger: TTGCTTAGCAAGGCACAACACGTACCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCCATCTTCTTTGGAGCTaGTGGACCCTGTCCGCACTT +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFHLLWS*WTLSAL
Trigger: AAGTGCGGACAGGGTCCACAAGCTCCAAAGAAGATG...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAGAGACGCCAGCAGCTaGATGGCATGGTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHRDASS*MAWFAS
Trigger: ACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTCT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCGGCTGGCCAAGATGTaGCCCTTCTCACCAGATGCC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYRLAKM*PFSPDA
Trigger: GGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGACGGGATGGTGTCGTaGGCAAATGCATTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVDGMVS*ANALRQ
Trigger: CTGGCGCAATGCATTTGCCAACGACACCATCCCGTC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTCGCCAGCATATCTGTaGCCATGGGGGTCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSPAYL*PWGSGC
Trigger: GCACCCTGACCCCCATGGCAACAGATATGCTGGCGA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGGACAGTGCCACTGGTaGTGGCAGGGGCGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPGQCHW*WQGRLS
Trigger: ACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCGTCCTTGTCTCCCATaGGAGTGTTGCTTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYRPCLP*ECCFEG
Trigger: CCCCTCGAAGCAACACTCCAATGGGAGACAAGGACG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTTGGAGACATCCTTTTaGTCCATGCCCAACTCGGCG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFLETSF*SMPNSA
Trigger: CGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCTCCAGCAGCTTCTaGATCCCACGCACATGGGAG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSSSSF*IPRTWE
Trigger: CTCCCATGTGCGTGGGATCAAGAAGCTGCTGGAGGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCAGAGGCAGGTCAATCTaGACTTCTGTCTGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPRGRSI*TSVCPG
Trigger: TCCCGGACAGACAGAAGTCAAGATTGACCTGCCTCT...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTACATTCTCTCCACAGTaGCCACAGACGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLTFSPQ*PQTPGL
Trigger: CAACCCAGGCGTCTGTGGCAACTGTGGAGAGAATGT...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTGCCGCAGCCAGTTGTaGTGGCCCAGCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRECRSQL*WPSLRS
Trigger: TGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAATGGGCTCTCCCTCATaGGTCGCACACCACACCTTC +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVMGSPS*VAHHTF
Trigger: GAAGGTGTGGTGTGCGACCAATGAGGGAGAGCCCAT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGGAGGAGGTTGCCCTaGTCCTCACTCAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRRRRLP*SSLRGS
Trigger: AGAGCCCCTGAGTGAGGACAAGGGCAACCTCCTCCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATACCGGCAGCAATTTaGCAGAAGCAATCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGEIPAAI*QKQSRK
Trigger: CTTCCTGGATTGCTTCTGCAAAATTGCTGCCGGTAT...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCGTAGTCCAGGGCATTTaGGGTGATTCCCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPVVQGI*GDSLLQ
Trigger: CTGCAGAAGGGAATCACCCAAAATGCCCTGGACTAC...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACCATTGCACTTCGTGTaGGCGTTCTGCAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVPLHFV*AFCRAA
Trigger: TGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GCTGGAAGTTCTGGAAGTGCTCACCACCTGCGCGGCGGGAGCTGCTaGTGGCCTGTCCAATCATGTCGTAGATCTCAAGACATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGSSGSAHHLRGGSC*WPVQSCRRSQDISE
Trigger: TTCAGAAATGTCTTGAGATCTACGACATGATTGGACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GGAGTGCCTCCACCTGCAAGTCTTGAAAGAGAGACGCCAGCAGCTTaGTGGCATGGTTTGCCAGTATCACCGAGAGTACCCCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: GVPPPASLERETPAA*WHGLPVSPRVPQIP
Trigger: AGGGATTTGGGGTACTCTCGGTGATACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAGGCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTCCACCTCCTTAATGATGCTGGCCAGAGTGGCCATGTGGTGCTCTaGGAGAGAGGCGCTCAGATAGCTCCGGATGAAACTGTTTCGAGA +
Preference number: 5 (lower is better)
Translates to: VHLLNDAGQSGHVVL*ERGAQIAPDETVSR
Trigger: TCTCGAAACAGTTTCATCCGGAGCTATCTGAGCGCCTCTCTCTCAGAGCACCACATGGCCACTCTGGCCAGCATCATTAAGGAGGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTGCTGGCATGGCGCACCAGACTTTCGGAAACCCTAGGTTCGCTCTaGAATGCTGACTCCTTCATGGTAGAGCTCATGCCACTGCTAGGA +
Preference number: 5 (lower is better)
Translates to: VLAWRTRLSETLGSL*NADSFMVELMPLLG
Trigger: TCCTAGCAGTGGCATGAGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAACCTAGGGTTTCCGAAAGTCTGGTGCGCCATGCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp TTCCTGGCTTTCCTGGCGGATGTGACCACCATCGGGGATGCCCGATaGCTGCATTTTCTCATCTGCGTCATCGTCATCATCGTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: FLAFLADVTTIGDAR*LHFLICVIVIIVVL
Trigger: AAGGACGACGATGATGACGATGACGCAGATGAGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAAAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp GCAGGCACTTCTTCCAGGCTTCGTATGATGCCTTGGGATCTCTCTTaGGCCACAGCTGAGCCTGGGCATGGATCTCATTGCAGTACGGTT +
Preference number: 5 (lower is better)
Translates to: AGTSSRLRMMPWDLS*ATAEPGHGSHCSTV
Trigger: AACCGTACTGCAATGAGATCCATGCCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAGAAGTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp CCCCACTATGGTCTTCATCGTACTTCTCGAAGCTGCAGTATGGCTTaGACCGCTCCACCAGGATCTGCATCTTCTCCACCTCTCCGAAGG +
Preference number: 5 (lower is better)
Translates to: PHYGLHRTSRSCSMA*TAPPGSASSPPLRR
Trigger: CCTTCGGAGAGGTGGAGAAGATGCAGATCCTGGTGGAGCGGTTCAAGCCATACTGCAGCTTCGAGAAGTACGATGAAGACCATAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GTCTTACTGCCACCATTGGAGCTTTTGATGTTGATGGGGAAGAGCTaGAACACCTCCAGGGTGCTCCTGCTGACAGTGGCTGCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: VLLPPLELLMLMGKS*NTSRVLLLTVAAKD
Trigger: GTCCTTTGCAGCCACTGTCAGCAGGAGCACCCTGGAGGTGTTGCAGCTCTTCCCCATCAACATCAAAAGCTCCAATGGTGGCAGTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CACTCTGTTCCTGGCTTTCCTGGCGGATGTGACCACCATCGGGGATaGCCGATGACTGCATTTTCTCATCTGCGTCATCGTCATCATCGT +
Preference number: 5 (lower is better)
Translates to: HSVPGFPGGCDHHRG*PMTAFSHLRHRHHR
Trigger: ACGATGATGACGATGACGCAGATGAGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAAAGCCAGGAACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GATGCAGAACTTCTGCCAGTTGATGGTTCGCTGGGCGGCAATCTCTaGACAGGCCTTCAGATGCTCCATCAGGCTGATGAGCGTGTCATA +
Preference number: 5 (lower is better)
Translates to: DAELLPVDGSLGGNL*TGLQMLHQADERVI
Trigger: TATGACACGCTCATCAGCCTGATGGAGCATCTGAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp AACCTGTCCCACACTTTCAGGCATTCAGGGACATCAGGGTCACCTTaGGCTCCAGCTTTATGCTGCCAGATAAGCAGGAGGCGAGAAAGC +
Preference number: 5 (lower is better)
Translates to: NLSHTFRHSGTSGSP*APALCCQISRRRES
Trigger: GCTTTCTCGCCTCCTGCTTATCTGGCAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTCCCTGAATGCCTGAAAGTGTGGGACAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TGCTTTGGCGGGAAGAGTCTTAATCTCCTGGATGAGGAAAGTGCCTaGCTTCACCATGACCACCAGAGGCACGCCAGTAGTCTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: CFGGKSLNLLDEESA*LHHDHQRHASSLLN
Trigger: GTTCAGCAGACTACTGGCGTGCCTCTGGTGGTCATGGTGAAGCCAGGCACTTTCCTCATCCAGGAGATTAAGACTCTTCCCGCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TGGCGGGGACAGAGGCACTGCAGCGAGGACATTGAAGGGTCTCTGTaGAGGCCTGGTAGTTCTCATAGAAGTCTGCAAACTCGATCATCA +
Preference number: 5 (lower is better)
Translates to: WRGQRHCSEDIEGSL*RPGSSHRSLQTRSS
Trigger: TGATGATCGAGTTTGCAGACTTCTATGAGAACTACCAGGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGTGCCTCTGTCCCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp CTATATGGGTTTCCGGGCATCCTGCCCTGTAGAAAGTCCTCTTGCTaGGGGTCCTTCTCCAGGGTCACGAAGAACTCCGTGACTTCATTC +
Preference number: 5 (lower is better)
Translates to: LYGFPGILPCRKSSC*GSFSRVTKNSVTSF
Trigger: GAATGAAGTCACGGAGTTCTTCGTGACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAACCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp CCGGCTCCTCAATCAGCTCTTCCATCTGCTTCAGGAGTGCAGTCTTaGTCACCACCTGACCCTTTTCGTTTGTCGTCATGCCCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: PAPQSALPSASGVQS*SPPDPFRLSSCPEF
Trigger: GAACTCTGGGCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGATTGAGGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAAGCACAGAGAGGCCTaGGGGGTGAATGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRKHREA*GVNVQG
Trigger: CCCCTGTACATTCACCCCCAAGGCCTCTCTGTGCTT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGACGGGATGGTGTCGTaGGCAAATGCATTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYDGMVS*ANALRQ
Trigger: CTGGCGCAATGCATTTGCCAACGACACCATCCCGTC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGATGGTGACCTTGGCCTaGTCAGCAGGAGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRMVTLA*SAGEVL
Trigger: CAGCACCTCTCCTGCTGACAAGGCCAAGGTCACCAT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGTCATCTCCACACCCTaGTCCACTGTGTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLVISTP*STVCSS
Trigger: TGAACTGCACACAGTGGACAAGGGTGTGGAGATGAC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CACTGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCCATGTCTTGGATCTTaGCTTTGGCGGGAAGAGTCT +
Preference number: 5 (lower is better)
Translates to: HCKAVSSLESTGQAAARPPCLGS*LWREES
Trigger: AGACTCTTCCCGCCAAAGCAAAGATCCAAGACATGG...GGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGTACGTTGCTGCTCATaGCAGGCAGTGTGCCTAATG +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLVRCCS*QAVCLM
Trigger: CATTAGGCACACTGCCTGCAATGAGCAGCAACGTAC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGTACGTTGCTGCTCATaGCAGGCAGTGTGCCTAATG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHVRCCS*QAVCLM
Trigger: CATTAGGCACACTGCCTGCAATGAGCAGCAACGTAC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCACAGCAGGATCATGGTaGTACGTTGCTGCTCATTGC +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGTAGSW*YVAAHC
Trigger: GCAATGAGCAGCAACGTACAACCATGATCCTGCTGT...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTGGCCAGGAGGCTCTTaGATTGCTGCTGGACACTGG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYWPGGS*IAAGHW
Trigger: CCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGCCAGGAAGGCATTCTaGGGCTTAGATGCATGGAGT +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLARKAF*GLDAWS
Trigger: ACTCCATGCATCTAAGCCCAAGAATGCCTTCCTGGC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCATCTTGGATGCTGTGTaGATACAGTCCAGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFILDAV*IQSSSQ
Trigger: CTGCGAGCTGGACTGTATCAACACAGCATCCAAGAT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGGACTGAGTTGTGGCTaGTCCAGAACTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAGLSCG*SRTGCR
Trigger: CCTGCAGCCAGTTCTGGACAAGCCACAACTCAGTCC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACGCACTGAGGACGAGTaGGACTCCAACAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRTEDE*DSNRKQ
Trigger: CTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCATCGTCCGCACCATCTaGGTTCGCTTCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAIVRTI*VRFRSP
Trigger: TGGGGACCTGAAGCGAACCAAGATGGTGCGGACGAT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGACTGCAGCGAGGACATaGAAGGGTCTCTGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRETAART*KGLCGG
Trigger: GCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCAGAAGCCACAAGCATaGCAGAGGAAGGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRQKPQA*QRKGSF
Trigger: AAAGGACCCCTTCCTCTGCAATGCTTGTGGCTTCTG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCAGAAGCCACAAGCATaGCAGAGGAAGGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHQKPQA*QRKGSF
Trigger: AAAGGACCCCTTCCTCTGCAATGCTTGTGGCTTCTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAGTGCAGTGGAGACTTaGCCAATGATCAGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSAVET*PMIRSF
Trigger: GAACGACCTGATCATTGGCAAAGTCTCCACTGCACT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCCACGGGGACATCCTaGTTCTTCTTGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSTGTS*FFLLVG
Trigger: CCCAACCAGCAAGAAGAACAAGGATGTCCCCGTGGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGCTTCGTATGATGCCTaGGGATCTCTCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHASYDA*GSLLSH
Trigger: GTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTTGTTGTGGCCCAGCTaGAGGTCAAGTGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRELLWPS*RSSGVV
Trigger: GACCACCCCACTTGACCTCAAGCTGGGCCACAACAA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGGCCTGTGAGACTCTaGAGGGCATATCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYRPVRL*RAYPCC
Trigger: GCAGCAGGGATATGCCCTCAAGAGTCTCACAGGCCT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCCCAGATTGTAGCGCTTaGCTGTCTCAATGCACACAG +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGPDCSA*LSQCTQ
Trigger: CTGTGTGCATTGAGACAGCAAAGCGCTACAATCTGG...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAGTGTTCGTCTCCAGCTaGACCAGCTGCTGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRVFVSS*TSCCRL
Trigger: CAACCGGCAGCAGCTGGTCAAGCTGGAGACGAACAC...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCTGTGAGGAGGAGGTaGCCCTTGTCCTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPVRRR*PLSSLR
Trigger: CCTGAGTGAGGACAAGGGCAACCTCCTCCTCACAGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGCGAACGAAGGTGCTGTaGATCTGGTCCAAGAGCATC +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMRTKVL*IWSKSI
Trigger: GATGCTCTTGGACCAGATCAACAGCACCTTCGTTCG...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCCATTGCACTTCGTGTaGGCGTTCTGCAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREPLHFV*AFCRAA
Trigger: TGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACACCGGAAGGAGCCCATaGCACTTCGTGTTGGCGTTC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYTGRSP*HFVLAF
Trigger: GAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCTGTTCCAGGAAGCCTaGGAGGTTCTTCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYLFQEA*EVLLLP
Trigger: CGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACACCAGCCGATCCAGCTaGGTTAGGGACTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHTSRSS*VRDSVS
Trigger: TGAAACTGAGTCCCTAACCAAGCTGGATCGGCTGGT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165860.8
CDS TCA 90 bp AATGAGCTGCAGCGTAGCTGGAAGGAGGTTCTTGGTGATCTCAGATaGCTTATGGGGGTCGGTCTCTGCGGCCATCTTAGAGAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: NELQRSWKEVLGDLR*LMGVGLCGHLREVL
Trigger: GAGCACTTCTCTAAGATGGCCGCAGAGACCGACCCCCATAAGTCATCTGAGATCACCAAGAACCTCCTTCCAGCTACGCTGCAGCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp AAACTGAGCATGTCTAACACGAGAGGAGCGAAGGAGAAATTGGCCTaGTTCTGCAGCTCCTCACGACACCCCTCAACTGTACGGCACAGG +
Preference number: 5 (lower is better)
Translates to: KLSMSNTRGAKEKLA*FCSSSRHPSTVRHR
Trigger: CCTGTGCCGTACAGTTGAGGGGTGTCGTGAGGAGCTGCAGAATCAGGCCAATTTCTCCTTCGCTCCTCTCGTGTTAGACATGCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp TTGATGATGAAGTTCCCTGTGGCCAACTGGGGATGTAACACTAAGTaGTCGGAGACAGAGCCTGAGCTGCTGAAGGTGAGCACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LMMKFPVANWGCNTK*SETEPELLKVSTWQ
Trigger: CTGCCACGTGCTCACCTTCAGCAGCTCAGGCTCTGTCTCCGATCACTTAGTGTTACATCCCCAGTTGGCCACAGGGAACTTCATCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp CTCTTTCCCCTCATCTGCTCCTTCTGTTTCCATCTGGGGCAGCTTTaGCTCGGTGAAGTGCACAAGGTTGTTAGGGCGTGTGACGGCAAT +
Preference number: 5 (lower is better)
Translates to: LFPLICSFCFHLGQL*LGEVHKVVRACDGN
Trigger: ATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGGAGCAGATGAGGGGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp ACTTTGCAGAGCAGGTTCTCCAACTGGGGCCGATGTCCCATGAGCTaGTGGTACACGCGGTCAGCTTTGTCCAGAAGTGTGTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: TLQSRFSNWGRCPMS*WYTRSALSRSVLML
Trigger: CAACATCAACACACTTCTGGACAAAGCTGACCGCGTGTACCATCAGCTCATGGGACATCGGCCCCAGTTGGAGAACCTGCTCTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp TTCCAGGCTTCGTATGATGCCTTGGGATCTCTCTTGAGCCACAGCTaGGCCTGGGCATGGATCTCATTGCAGTACGGTTTCACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: FQASYDALGSLLSHS*AWAWISLQYGFTVV
Trigger: CACCACAGTGAAACCGTACTGCAATGAGATCCATGCCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp GATCGAACGAAGGTGCTGTTGATCTGGTCCAAGAGCATCACCAGTTaGTCCTTGTCACCTGTGAGGAGGAGGTTGCCCTTGTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: DRTKVLLIWSKSITS*SLSPVRRRLPLSSL
Trigger: GAGTGAGGACAAGGGCAACCTCCTCCTCACAGGTGACAAGGATCAACTGGTGATGCTCTTGGACCAGATCAACAGCACCTTCGTTCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp ATCAGCTCTTCCATCTGCTTCAGGAGTGCAGTCTTGGTCACCACCTaGCCCTTTTCGTTTGTCGTCATGCCCAGAGTTCCCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: ISSSICFRSAVLVTT*PFSFVVMPRVPRAF
Trigger: GAAGGCTCTGGGAACTCTGGGCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CAGAATTTAGCAGAGAGGTCCTCATTGGCTGTGGCCATCATGATCTaGACCAGCTCCCCACCATCAGAGAAGAACTCCTCCATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: QNLAERSSLAVAIMI*TSSPPSEKNSSMAF
Trigger: GAAGGCCATGGAGGAGTTCTTCTCTGATGGTGGGGAGCTGGTGCAGATCATGATGGCCACAGCCAATGAGGACCTCTCTGCTAAATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp GCCAGTAAGAGGTGTTCTCTACATTGGCCATGTAAATCCGCAGGCTaGCGTCCTCGCACAGCAGGATCATGGTTGTACGTTGCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: ASKRCSLHWPCKSAG*RPRTAGSWLYVAAH
Trigger: ATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCGGATTTACATGGCCAATGTAGAGAACACCTCTTACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CTTGGAGACATCCTTTTTGTCCATGCCCAACTCGGCGATGAGCTGTaGAAGCAGGTTGTCCAGGGCTCCCTTGTCTTTCTCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGDILFVHAQLGDEL*KQVVQGSLVFLIFS
Trigger: GGAGAAGATGAGAAAGACAAGGGAGCCCTGGACAACCTGCTTGCACAGCTCATCGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TGCAGGAGGAAGTACAGGACAGAGTCATCTTTGATGCAGAACTTCTaGCAGTTGATGGTTCGCTGGGCGGCAATCTCTGCACAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: CRRKYRTESSLMQNF*QLMVRWAAISAQAF
Trigger: GAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAAAGATGACTCTGTCCTGTACTTCCTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp TGCAGCAGCACGGGGGACACCCCCTCATCTACCAGGAAACTCACTTaGAGGAGGAAGTACAGGACAGAGTCATCTTTGATGCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: CSSTGDTPSSTRKLT*RRKYRTESSLMQNF
Trigger: GAAGTTCTGCATCAAAGATGACTCTGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTAGATGAGGGGGTGTCCCCCGTGCTGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CCCTGCTTAAAATCTTTGACTCCTGCCAGTCTGTTCAACATGCACTaGAGACCCCCACACTGGGCCATCACACCGGCCATTCTGTACACT +
Preference number: 5 (lower is better)
Translates to: PCLKSLTPASLFNMH*RPPHWAITPAILYT
Trigger: AGTGTACAGAATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGGCAGGAGTCAAAGATTTTAAGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp TCTGCGTTGGATTCATCTAGAATGATCTCCATGATGCTTAGCACCTaGTCAGCCACAGCTGCTCCTCCGCTGTCCTTGCTCTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: SALDSSRMISMMLST*SATAAPPLSLLSCS
Trigger: CGAGCAAGAGAGCAAGGACAGCGGAGGAGCAGCTGTGGCTGAGCAGGTGCTAAGCATCATGGAGATCATTCTAGATGAATCCAACGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp TACTTCTCGAAGCTGCAGTATGGCTTGAACCGCTCCACCAGGATCTaGATCTTCTCCACCTCTCCGAAGGACAGGTATGGGATGATACGC +
Preference number: 5 (lower is better)
Translates to: YFSKLQYGLNRSTRI*IFSTSPKDRYGMIR
Trigger: GCGTATCATCCCATACCTGTCCTTCGGAGAGGTGGAGAAGATGCAGATCCTGGTGGAGCGGTTCAAGCCATACTGCAGCTTCGAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp GAAAAACAGTCTGTTTCCATCTGGGGCAGCTTTGACTCGGTGAAGTaGACAAGGTTGTTAGGGCGTGTGACGGCAATGGAGCGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EKQSVSIWGSFDSVK*TRLLGRVTAMERAV
Trigger: CACAGCTCGCTCCATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGACTGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129779.2
CDS CCA 90 bp CAATCGTGGCTGCATCACTTTCGTAGTCATCTTCTTTGGAGCTTGTaGACCCTGTCCGCACTTGCTGGGCACTACCCACATGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: QSWLHHFRSHLLWSL*TLSALAGHYPHEGW
Trigger: CCATCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAGATGACTACGAAAGTGATGCAGCCACGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TGCAGCGTAGCTGGAAGGAGGTTCTTGGTGATCTCAGATGACTTATaGGGGTCGGTCTCTGCGGCCATCTTAGAGAAGTGCTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: CSVAGRRFLVISDDL*GSVSAAILEKCSSR
Trigger: TCTGGATGAGCACTTCTCTAAGATGGCCGCAGAGACCGACCCCCATAAGTCATCTGAGATCACCAAGAACCTCCTTCCAGCTACGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp TCATATCTGGCGGAGATGAAGTCGTGTGTGGTTTCAGCAGTTGGCTaGCAGCCACAGGCTCCTCATCACTCTGCTGGCTCTTCCAGTATT +
Preference number: 5 (lower is better)
Translates to: SYLAEMKSCVVSAVG*QPQAPHHSAGSSSI
Trigger: AATACTGGAAGAGCCAGCAGAGTGATGAGGAGCCTGTGGCTGCCAGCCAACTGCTGAAACCACACACGACTTCATCTCCGCCAGATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp ACAGAGTCATCTTTGATGCAGAACTTCTGCCAGTTGATGGTTCGCTaGGCGGCAATCTCTGCACAGGCCTTCAGATGCTCCATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TESSLMQNFCQLMVR*AAISAQAFRCSIRL
Trigger: CAGCCTGATGGAGCATCTGAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAAAGATGACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp TTGACTCCTGCCAGTCTGTTCAACATGCACTGCAGACCCCCACACTaGGCCATCACACCGGCCATTCTGTACACTTCCTCTTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LTPASLFNMHCRPPH*AITPAILYTSSSSS
Trigger: AGAAGATGAAGAGGAAGTGTACAGAATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGGCAGGAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp GTCATCCCCACTATGGTCTTCATCGTACTTCTCGAAGCTGCAGTATaGCTTGAACCGCTCCACCAGGATCTGCATCTTCTCCACCTCTCC +
Preference number: 5 (lower is better)
Translates to: VIPTMVFIVLLEAAV*LEPLHQDLHLLHLS
Trigger: GGAGAGGTGGAGAAGATGCAGATCCTGGTGGAGCGGTTCAAGCCATACTGCAGCTTCGAGAAGTACGATGAAGACCATAGTGGGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATGCAGACGAGAAGGATaGAGGGGTTCCAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRCRREG*RGSSTG
Trigger: GCCTGTGCTGGAACCCCTCAATCCTTCTCGTCTGCA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGGACCCTGTCCGCACTaGCTGGGCACTACCCACATG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIGPCPH*LGTTHM
Trigger: CATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGCCCACTCCCTCCTTaGTACGAGAAAGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSPLPP*YEKGCL
Trigger: GAGACATCCTTTCTCGTACAAAGGAGGGAGTGGGCT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGAGACGCCAGCAGCTaGATGGCATGGTTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRRDASS*MAWFAS
Trigger: ACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTCT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCTGTCTCCCAGCCCTaGTGGAGTGCCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSSVSQP*WSASTC
Trigger: GCAGGTGGAGGCACTCCACAAGGGCTGGGAGACAGA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAAGTCAAGAGCAGGTTaGTCAGTGGGACAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFKSRAG*SVGQSQ
Trigger: TTGACTCTGTCCCACTGACAAACCTGCTCTTGACTT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACCAGATGCCTGCTTATaGGGGCTTTTAACCCGAGGA +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVPDACL*GLLTRG
Trigger: TCCTCGGGTTAAAAGCCCCAATAAGCAGGCATCTGG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACATGAAGTTCAGGATGTaGGAAGCCAGGCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHMKFRM*EARPEN
Trigger: GTTCTCAGGCCTGGCTTCCAACATCCTGAACTTCAT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCATCTGATGACCCCTaGAGTCCATCTTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRSSDDP*SPSLST
Trigger: GGTGGACAAAGATGGACTCAAGGGGTCATCAGATGA...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCATCTGATGACCCCTaGAGTCCATCTTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHSSDDP*SPSLST
Trigger: GGTGGACAAAGATGGACTCAAGGGGTCATCAGATGA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGACATCAGGGTCACCTaGGGCTCCAGCTTTATGCTG +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEADIRVT*GSSFML
Trigger: CAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGCAGAGAGGTCCTCATaGGCTGTGGCCATCATGATC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYAERSS*AVAIMI
Trigger: GATCATGATGGCCACAGCCAATGAGGACCTCTCTGC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTCGCCAGCATATCTGTaGCCATGGGGGTCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPSPAYL*PWGSGC
Trigger: GCACCCTGACCCCCATGGCAACAGATATGCTGGCGA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTTGGAGCTTTTGATGTaGATGGGGAAGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFLELLM*MGKSCN
Trigger: GTTGCAGCTCTTCCCCATCAACATCAAAAGCTCCAA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGCCACCATTGGAGCTTTaGATGTTGATGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: DVHTQAGRDSSQLLGTYRPPLEL*MLMGKS
Trigger: GCTCTTCCCCATCAACATCAAAAGCTCCAATGGTGG...CCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTGATCATGGTTGTACGTaGCTGCTCATTGCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLDHGCT*LLIAGS
Trigger: ACTGCCTGCAATGAGCAGCAACGTACAACCATGATC...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGACCATGGTGCTGCTGTaGTTACTGATCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMTMVLL*LLISMV
Trigger: CACCATCGAGATCAGTAACAACAGCAGCACCATGGT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTCGGGGTCCAAGTCCTaGCCTTCTTTGCTGGATGTG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRESGSKS*PSLLDV
Trigger: CACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGATGAATGAGGGGAGAATGATCTTGGATGCTGTGTaGATACAGTCCAGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: AASVGEMSAHGEMNEGRMILDAV*IQSSSQ
Trigger: CTGCGAGCTGGACTGTATCAACACAGCATCCAAGAT...CATTCTCCCCTCATTCATCTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTTCTCCCATTGGAGTGTaGCTTCGAGGGGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPSPIGV*LRGEEG
Trigger: GCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGA...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCACATTCTCTCCACAGTaGCCACAGACGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEATFSPQ*PQTPGL
Trigger: CAACCCAGGCGTCTGTGGCAACTGTGGAGAGAATGT...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTTGTCCAGAAGTGTGTaGATGTTGGAAACGGCCTTC +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFLSRSV*MLETAF
Trigger: GAAGGCCGTTTCCAACATCAACACACTTCTGGACAA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACACAACCACTGGCGTTTaGATGTTCACAGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHTTTGV*MFTAMR
Trigger: CCTCATGGCTGTGAACATCAAAACGCCAGTGGTTGT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTCCACGGGGACATCCTaGTTCTTCTTGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRSTGTS*FFLLVG
Trigger: CCCAACCAGCAAGAAGAACAAGGATGTCCCCGTGGA...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTACCTGCCGCAGCCAGTaGTTGTGGCCCAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLITCRSQ*LWPSLR
Trigger: CCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTACAGGCTGCCTGCCTaGCTGCCTGTGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSYRLPA*LPVLLG
Trigger: CCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCGAACGAAGGTGCTGTaGATCTGGTCCAAGAGCATC +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYRTKVL*IWSKSI
Trigger: GATGCTCTTGGACCAGATCAACAGCACCTTCGTTCG...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTGCTGCTTCCGGGGCTaGTTCTCCATCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTECCFRG*FSISSK
Trigger: CTTGGAGGAGATGGAGAACAAGCCCCGGAAGCAGCA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTGTTCCAGGAAGCCTaGGAGGTTCTTCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELFQEA*EVLLLP
Trigger: CGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTCTGTCCACTTCTCTTaGGGCTGTTCCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYSVHFS*GCSRKP
Trigger: AGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp TCTGCAGGTTTGGGGACTGTAGGTCAGAAGTCACCAGCGAGTGGTTaGAGTGATAGAGAGCAGCAGCAAAGTCCTCATCTGATGACCCCT +
Preference number: 5 (lower is better)
Translates to: SAGLGTVGQKSPASG*SDREQQQSPHLMTP
Trigger: AGGGGTCATCAGATGAGGACTTTGCTGCTGCTCTCTATCACTTCAACCACTCGCTGGTGACTTCTGACCTACAGTCCCCAAACCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp ATGGCGCACCAGACTTTCGGAAACCCTAGGTTCGCTCTGAAATGCTaGCTCCTTCATGGTAGAGCTCATGCCACTGCTAGGAGTTCGCTT +
Preference number: 5 (lower is better)
Translates to: MAHQTFGNPRFALKC*LLHGRAHATARSSL
Trigger: AAGCGAACTCCTAGCAGTGGCATGAGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAACCTAGGGTTTCCGAAAGTCTGGTGCGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp CGTTCTTCTTGGAGACATCCTTTTTGTCCATGCCCAACTCGGCGATaGGCTGTGCAAGCAGGTTGTCCAGGGCTCCCTTGTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: RSSWRHPFCPCPTRR*AVQAGCPGLPCLSH
Trigger: ATGAGAAAGACAAGGGAGCCCTGGACAACCTGCTTGCACAGCTCATCGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAAGAAGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 90 bp CTAAGCCAGACAAGGTGTTGTAGATGTTGGAGTTGGGGTGATTGGTaGGGATATGGTTCTGAGTCCTCAGGATCTCCACGGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LSQTRCCRCWSWGDW*GYGSESSGSPRPSG
Trigger: CCCAGAAGGCCGTGGAGATCCTGAGGACTCAGAACCATATCCTCACCAATCACCCCAACTCCAACATCTACAACACCTTGTCTGGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp TCAGCTCCACGATGGCCTGCACAGTTCGGTTGTTGTAGTACAGGTTaGTCGTCCGCACCATCTTGGTTCGCTTCAGGTCCCCAATTTTCA +
Preference number: 5 (lower is better)
Translates to: SAPRWPAQFGCCSTG*SSAPSWFASGPQFS
Trigger: TGAAAATTGGGGACCTGAAGCGAACCAAGATGGTGCGGACGATCAACCTGTACTACAACAACCGAACTGTGCAGGCCATCGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp GGCAGAGGCAGGTCAATCTTGACTTCTGTCTGTCCGGGAGTCAGCTaGACTTTCTTGGCTTTGTGCCAGCGAGCTGGCTTATTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRGRSILTSVCPGVS*TFLALCQRAGLFFS
Trigger: GCTGAAAAATAAGCCAGCTCGCTGGCACAAAGCCAAGAAAGTTCAGCTGACTCCCGGACAGACAGAAGTCAAGATTGACCTGCCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp AGGGGACTGAGTTCAACAGGTCCTTTAGGAAGCTCTCTGGATCGGTaGTTTCTGATAGAAGACCTGCTGCGTCGAGGAACTCCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RGLSSTGPLGSSLDR*FLIEDLLRRGTPRR
Trigger: CCTTCTCGGAGTTCCTCGACGCAGCAGGTCTTCTATCAGAAATCACCGATCCAGAGAGCTTCCTAAAGGACCTGTTGAACTCAGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp AGGTGCTCAACGTTCAGGTCTTCTGTCTCACTGGGCACCACCCCCTaGAGTGCATTCTGCTTCATGGTAGTTAAAAACCTGTCCCACACT +
Preference number: 5 (lower is better)
Translates to: RCSTFRSSVSLGTTP*SAFCFMVVKNLSHT
Trigger: AGTGTGGGACAGGTTTTTAACTACCATGAAGCAGAATGCACTGCAGGGGGTGGTGCCCAGTGAGACAGAAGACCTGAACGTTGAGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp ACATTGAAGGGTCTCTGTGGAGGCCTGGTAGTTCTCATAGAAGTCTaGAAACTCGATCATCAGGTTAGAGGCCACGATGGGCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TLKGLCGGLVVLIEV*KLDHQVRGHDGQRQ
Trigger: CTGCCTCTGCCCATCGTGGCCTCTAACCTGATGATCGAGTTTGCAGACTTCTATGAGAACTACCAGGCCTCCACAGAGACCCTTCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp GGAAACGGCCTTCTTCCGATCTTCTTCGTTCTCGATGGGATCCACTaGACAGCAAGGCTTGGCATAAAGCATGAAGTCAAAGCGGGCGTA +
Preference number: 5 (lower is better)
Translates to: GNGLLPIFFVLDGIH*TARLGIKHEVKAGV
Trigger: TACGCCCGCTTTGACTTCATGCTTTATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAGAACGAAGAAGATCGGAAGAAGGCCGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp ACCATGTCTTGGATCTTTGCTTTGGCGGGAAGAGTCTTAATCTCCTaGATGAGGAAAGTGCCTGGCTTCACCATGACCACCAGAGGCACG +
Preference number: 5 (lower is better)
Translates to: TMSWIFALAGRVLIS*MRKVPGFTMTTRGT
Trigger: CGTGCCTCTGGTGGTCATGGTGAAGCCAGGCACTTTCCTCATCCAGGAGATTAAGACTCTTCCCGCCAAAGCAAAGATCCAAGACATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp AGTCTTGCCATAAATTTTTACAGCATCTATCATGGTGACACCAGCTaGATCCACGGAGGCACCGATGAAGAGGCTCAGCTTCCGGTCGGC +
Preference number: 5 (lower is better)
Translates to: SLAINFYSIYHGDTS*IHGGTDEEAQLPVG
Trigger: GCCGACCGGAAGCTGAGCCTCTTCATCGGTGCCTCCGTGGATCCAGCTGGTGTCACCATGATAGATGCTGTAAAAATTTATGGCAAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CGCAGAAACTGGATCAGAGTTTCTTTGTCTGCAAATCTGTTCAGCTaGTTCACGAGAGCTGTGCACAGCTGGTCCTCCTGGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: RRNWIRVSLSANLFS*FTRAVHSWSSWLPE
Trigger: CTCTGGTAGCCAGGAGGACCAGCTGTGCACAGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGAGCACTGTCACATCTaGCAGACGAGAAGGATTGAG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVEHCHI*QTRRIE
Trigger: CTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCTC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAAGTCAAGAGCAGGTTaGTCAGTGGGACAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHKSRAG*SVGQSQ
Trigger: TTGACTCTGTCCCACTGACAAACCTGCTCTTGACTT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCCAGATGCCTGCTTATaGGGGCTTTTAACCCGAGGA +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREPDACL*GLLTRG
Trigger: TCCTCGGGTTAAAAGCCCCAATAAGCAGGCATCTGG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTTTCCTTCCTCCTGGTaGTATCCAGCTGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYFPSSW*YPAEIQ
Trigger: CTGGATCTCAGCTGGATACAACCAGGAGGAAGGAAA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGCAAGGCTGTGAGTTCACTGGAAAGCACTGGGCAAGCAGCAGCTAGACCCCTTAATTCTGCACTAGAGTaGGTCCCAGTGTGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: CKAVSSLESTGQAAARPLNSALE*VPVCLP
Trigger: AGGCAAACACACTGGGACCAACTCTAGTGCAGAATT...AAGGGGTCTAGCTGCTGCTTGCCCAGTGCTTTCCAGTGAACTCACAGCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGTCATCTCCACACCCTaGTCCACTGTGTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYVISTP*STVCSS
Trigger: TGAACTGCACACAGTGGACAAGGGTGTGGAGATGAC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTGCAGCACTGTGATCTaGCCCTTCTCATGGCTAACA +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYCSTVI*PFSWLT
Trigger: TGTTAGCCATGAGAAGGGCAAGATCACAGTGCTGCA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAATGGCAACCATGTCTaGGATCTTTGCTTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYNGNHV*DLCFGG
Trigger: CCCGCCAAAGCAAAGATCCAAGACATGGTTGCCATT...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGACACTGCACAGCTTaGCTCAACAAGGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERHCTA*LNKAWS
Trigger: GGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTCT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCTCCCATTGGAGTGTaGCTTCGAGGGGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSPIGV*LRGEEG
Trigger: GCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGAGGGGTTGCCATTGTaGACATTTTCAGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHEGLPL*TFSAVS
Trigger: GGAAACAGCTGAAAATGTCAACAATGGCAACCCCTC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACGGAGAGGGGTTGCCATaGTTGACATTTTCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHGEGLP*LTFSAV
Trigger: AACAGCTGAAAATGTCAACAATGGCAACCCCTCTCC...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCGATTTGGATCCAGACTaGGTACGAGACATGAAGACA +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFDLDPD*VRDMKT
Trigger: TGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATC...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGTGTGGTTTCAGCAGTaGGCTGGCAGCCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSVWFQQ*AGSHRL
Trigger: GAGCCTGTGGCTGCCAGCCAACTGCTGAAACCACAC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTACCAGGAAACTCACTaGCAGGAGGAAGTACAGGAC +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYYQETH*QEEVQD
Trigger: GTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACAAGATTTGGACTGAGTaGTGGCTTGTCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHKIWTE*WLVQNW
Trigger: CCAGTTCTGGACAAGCCACAACTCAGTCCAAATCTT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAGCTGCTTCATTCACTTaGCAGAGCAGGTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVAASFT*QSRFSN
Trigger: GTTGGAGAACCTGCTCTGCAAAGTGAATGAAGCAGC...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCACTTTCTGGATGATTTaGGAGAGCTCATCGAACGAG +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFTFWMI*ESSSNE
Trigger: CTCGTTCGATGAGCTCTCCAAAATCATCCAGAAAGT...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCGCTTCGTATGATGCCTaGGGATCTCTCTTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAASYDA*GSLLSH
Trigger: GTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGC...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCAAGGACCTGCTGCTaGCGGCTGGGGACAGTAGCA +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSRTCC*RLGTVA
Trigger: TGCTACTGTCCCCAGCCGCAAGCAGCAGGTCCTTGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCTGTGAGGAGGAGGTaGCCCTTGTCCTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPVRRR*PLSSLR
Trigger: CCTGAGTGAGGACAAGGGCAACCTCCTCCTCACAGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCAATCCAGGAAGACTTaGTCATCCCCACTATGGTCT +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHQSRKT*SSPLWS
Trigger: AGACCATAGTGGGGATGACAAAGTCTTCCTGGATTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACGTAGTCCAGGGCATTTaGGGTGATTCCCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYVVQGI*GDSLLQ
Trigger: CTGCAGAAGGGAATCACCCAAAATGCCCTGGACTAC...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTCAGCATCCAAATTCTaGGCACTGGGGATATGCTTT +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSASKF*ALGICF
Trigger: AAAGCATATCCCCAGTGCCAAGAATTTGGATGCTGA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CACTGTTGGGATCTGCATGGTTGGCCAGAATGTTGTAACATCCCGTaGTCAGCTTCTCATACACACGAGCCAGGAACTCATCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: HCWDLHGWPECCNIP*SASHTHEPGTHQTP
Trigger: CGGAGTCTGATGAGTTCCTGGCTCGTGTGTATGAGAAGCTGATCACGGGATGTTACAACATTCTGGCCAACCATGCAGATCCCAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CCAGGAGTGATCAAAGACAGGAGGAGGAATCCGAGAGCTGGTGTCTaGGATCTTCTTGATTTGGTAGGGAAGCCTCAGTACCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: PGVIKDRRRNPRAGV*DLLDLVGKPQYHLC
Trigger: ACAGAGATGGTACTGAGGCTTCCCTACCAAATCAAGAAGATCGCAGACACCAGCTCTCGGATTCCTCCTCCTGTCTTTGATCACTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TCCATCCCACTGTCATCCTCCAGAAGAGCCACTAGGTCACAGTCCTaGCAGATCTTGTTCTTTATGTCCCTCATAAGAGGCCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: SIPLSSSRRATRSQS*QILFFMSLIRGPMP
Trigger: AGGCATTGGGCCTCTTATGAGGGACATAAAGAACAAGATCTGCCAGGACTGTGACCTAGTGGCTCTTCTGGAGGATGACAGTGGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGACTGTCTGTGGAAGCTaGGCGGACTTCATCATTGCT +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRTVCGS*ADFIIA
Trigger: AGCAATGATGAAGTCCGCCAAGCTTCCACAGACAGT...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTGCAGACGAGAAGGATaGAGGGGTTCCAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLICRREG*RGSSTG
Trigger: GCCTGTGCTGGAACCCCTCAATCCTTCTCGTCTGCA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTCCTTCTCTTTCCCCTaGTCAGCCAGGGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLSFSFP*SARAVG
Trigger: CCCCACAGCCCTGGCTGACAAGGGGAAAGAGAAGGA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGAGGAGGGGGTGCTAATGCAGCATCCGTGGGGGAAATGAGTGCACACGGAGAGCCTTTCTGTATGAAGTaGAAAGTAAAGTCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: GGGGANAASVGEMSAHGEPFCMK*KVKSRA
Trigger: TGCTCTTGACTTTACTTTCAACTTCATACAGAAAGG...CTCTCCGTGTGCACTCATTTCCCCCACGGATGCTGCATTAGCACCCCCTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGTGTATTCTGCAGGTTaGGGGACTGTAGGTCAGAAG +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRVYSAG*GTVGQK
Trigger: CTTCTGACCTACAGTCCCCAAACCTGCAGAATACAC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCTCGTACTTGACAGGCTaGGAGAAAAGAACTTCACAT +
Preference number: 5 (lower is better)
Translates to: HTQAGRDSSQLLGTYRSFSYLTG*EKRTSH
Trigger: ATGTGAAGTTCTTTTCTCCAAGCCTGTCAAGTACGA...GAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTTTCCTTCCTCCTGGTaGTATCCAGCTGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREFPSSW*YPAEIQ
Trigger: CTGGATCTCAGCTGGATACAACCAGGAGGAAGGAAA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTAAATTCTGCACTAGAGTaGGTCCCAGTGTGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVNSALE*VPVCLP
Trigger: AGGCAAACACACTGGGACCAACTCTAGTGCAGAATT...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTACGCCAGGATCCAATGTaGGGAAACTCATTGGTATTG +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVRQDPM*GNSLVL
Trigger: CAATACCAATGAGTTTCCCAACATTGGATCCTGGCG...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCATGGTGACCTTGGCCTaGTCAGCAGGAGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSMVTLA*SAGEVL
Trigger: CAGCACCTCTCCTGCTGACAAGGCCAAGGTCACCAT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGATCATGGTTGTACGTaGCTGCTCATTGCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREDHGCT*LLIAGS
Trigger: ACTGCCTGCAATGAGCAGCAACGTACAACCATGATC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACACCATGGTGCTGCTGTaGTTACTGATCTCGATGGTG +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYTMVLL*LLISMV
Trigger: CACCATCGAGATCAGTAACAACAGCAGCACCATGGT...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGTCACGTGTCTCCGCTaGTTCCTGGGCCTTAGGACT +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMVTCLR*FLGLRT
Trigger: AGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGAC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGTCATCATCGTCGTCCTaGTCTCCCATTGGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRESSSSS*SPIGVL
Trigger: CAACACTCCAATGGGAGACAAGGACGACGATGATGA...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGCTGCGCTCGTTCTTCTaGGAGACATCCTTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREELRSFF*ETSFLS
Trigger: GGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAG...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCTCCAGCAGCTTCTaGATCCCACGCACATGGGAG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLISSSSF*IPRTWE
Trigger: CTCCCATGTGCGTGGGATCAAGAAGCTGCTGGAGGA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCAGAACTTCTGCCAGTaGATGGTTCGCTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSQNFCQ*MVRWAA
Trigger: TGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTGGATCAGAGTTTCTTaGTCTGCAAATCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QAGRDSSQLLGTYRSFNGWIRVS*SANLFS
Trigger: GCTGAACAGATTTGCAGACAAAGAAACTCTGATCCA...GCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAACGGCACCTCAGGATaGTTACACACCAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMNGTSG*LHTRQG
Trigger: CCCCTGCCTGGTGTGTAACAATCCTGAGGTGCCGTT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGACTGCAGCGAGGACATaGAAGGGTCTCTGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMTAART*KGLCGG
Trigger: GCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGGCTGCTTCATTCACTTaGCAGAGCAGGTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEAASFT*QSRFSN
Trigger: GTTGGAGAACCTGCTCTGCAAAGTGAATGAAGCAGC...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACACTTTCTGGATGATTTaGGAGAGCTCATCGAACGAG +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHTFWMI*ESSSNE
Trigger: CTCGTTCGATGAGCTCTCCAAAATCATCCAGAAAGT...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCGACGTCCGGGATGACTaGGTGGCTGCTTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSDVRDD*VAASLC
Trigger: GCAAAGAGAAGCAGCCACCAAGTCATCCCGGACGTC...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTGGGCATGGATCTCATaGCAGTACGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEWAWIS*QYGFTV
Trigger: CACAGTGAAACCGTACTGCAATGAGATCCATGCCCA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACCAGTCCTGGCAGATCTaGTTCTTTATGTCCCTCATA +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHQSWQI*FFMSLI
Trigger: TATGAGGGACATAAAGAACAAGATCTGCCAGGACTG...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCAAGAGCATCACCAGTaGATCCTTGTCACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRQEHHQ*ILVTCE
Trigger: CTCACAGGTGACAAGGATCAACTGGTGATGCTCTTG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGACCGGAAGGAGCCCATaGCACTTCGTGTTGGCGTTC +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMTGRSP*HFVLAF
Trigger: GAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGCGCAGGAAGAGCAGTTaGATGTCATGGATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRRRKSS*MSWMLS
Trigger: GCTCAACATCCATGACATCAAACTGCTCTTCCTGCG...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CCTGGTTGTATCCAGCTGAGATCCAGCCGCGAGCAGGGTAGTCAGTaGGGAATAAAGTTCATCGTACTTGACAGGCTTGGAGAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: PGCIQLRSSREQGSQ*GIKFIVLDRLGEKN
Trigger: GTTCTTTTCTCCAAGCCTGTCAAGTACGATGAACTTTATTCCTCACTGACTACCCTGCTCGCGGCTGGATCTCAGCTGGATACAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CGTTCTCGATGGGATCCACTGCACAGCAAGGCTTGGCATAAAGCATaGAGTCAAAGCGGGCGTATTTACAGAAGCCACAAGCATTGCAGA +
Preference number: 5 (lower is better)
Translates to: RSRWDPLHSKAWHKA*SQSGRIYRSHKHCR
Trigger: TCTGCAATGCTTGTGGCTTCTGTAAATACGCCCGCTTTGACTTCATGCTTTATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 90 bp AGTCATCCAGATTGTAGCGCTTTGCTGTCTCAATGCACACAGCCATaGAGGCCTTGGTTTCAGACTCTGTACCTGTGGTCATGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SHPDCSALLSQCTQP*RPWFQTLYLWSCPP
Trigger: TGGAGGACATGACCACAGGTACAGAGTCTGAAACCAAGGCCTTCATGGCTGTGTGCATTGAGACAGCAAAGCGCTACAATCTGGATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp TTCAGGTCTTCTGTCTCACTGGGCACCACCCCCTGCAGTGCATTCTaGTTCATGGTAGTTAAAAACCTGTCCCACACTTTCAGGCATTCA +
Preference number: 5 (lower is better)
Translates to: FRSSVSLGTTPCSAF*FMVVKNLSHTFRHS
Trigger: TGAATGCCTGAAAGTGTGGGACAGGTTTTTAACTACCATGAAGCAGAATGCACTGCAGGGGGTGGTGCCCAGTGAGACAGAAGACCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp AGCCACGTACATGCCAGTGGAGTTCAGCCTGTGCTTTATCTGCTGTaGATTGTAGACTTGCAAGAGGTCATTACCGCCAAACTCCACATC +
Preference number: 5 (lower is better)
Translates to: SHVHASGVQPVLYLL*IVDLQEVITAKLHI
Trigger: GATGTGGAGTTTGGCGGTAATGACCTCTTGCAAGTCTACAATGCACAGCAGATAAAGCACAGGCTGAACTCCACTGGCATGTACGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp CTCCAACAGGAAACAGCGCAGAAACTGGATCAGAGTTTCTTTGTCTaGAAATCTGTTCAGCTGGTTCACGAGAGCTGTGCACAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LQQETAQKLDQSFFV*KSVQLVHESCAQLV
Trigger: GACCAGCTGTGCACAGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp CACAGGTACCCATTCAGCACAGTGCCCACTAAGCGGCTCTTAAAATaGCTCTTAATGGATTCCACCTCTACAAAGGAGGAGAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HRYPFSTVPTKRLLK*LLMDSTSTKEERRP
Trigger: AGGCCTTCTCTCCTCCTTTGTAGAGGTGGAATCCATTAAGAGGCATTTTAAGAGCCGCTTAGTGGGCACTGTGCTGAATGGGTACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 90 bp AAAGATGAACACGGGAGTCCGGTAGTCATCCAGATTGTAGCGCTTTaGTGTCTCAATGCACACAGCCATGAAGGCCTTGGTTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: KDEHGSPVVIQIVAL*CLNAHSHEGLGFRL
Trigger: GAGTCTGAAACCAAGGCCTTCATGGCTGTGTGCATTGAGACAGCAAAGCGCTACAATCTGGATGACTACCGGACTCCCGTGTTCATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 90 bp TTAGCAGATTGTGCTGCACCTGCTCAAACAGATACACGGGGGCTTTaGAGTACTGATGAAGTAGGTAGTCAAAGATCAAGAGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: LADCAAPAQTDTRGL*STDEVGSQRSRGGG
Trigger: CCCGCCTCCTCTTGATCTTTGACTACCTACTTCATCAGTACTCCAAAGCCCCCGTGTATCTGTTTGAGCAGGTGCAGCACAATCTGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 90 bp CGCACTGAGGACGAGTTGGACTCCAACAGGAAACAGCGCAGAAACTaGATCAGAGTTTCTTTGTCTGCAAATCTGTTCAGCTGGTTCACG +
Preference number: 5 (lower is better)
Translates to: RTEDELDSNRKQRRN*IRVSLSANLFSWFT
Trigger: CGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTCTCCACCTGCAAGTCTaGAAAGAGAGACGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILHLQV*KERRQQ
Trigger: CTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAG...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCAGCCGTTGAATCCTTaGTGTGGAGGTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLQPLNP*CGGALG
Trigger: GCCCAGAGCACCTCCACACAAAGGATTCAACGGCTG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAAGCACAGAGAGGCCTaGGGGGTGAATGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLKHREA*GVNVQG
Trigger: CCCCTGTACATTCACCCCCAAGGCCTCTCTGTGCTT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCTCGGGCTTCATGCCTaGTTTGATAAGGTGATCCTT +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEALGLHA*FDKVIL
Trigger: AAGGATCACCTTATCAAACAAGGCATGAAGCCCGAG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTTTCCATGCATTACATaGGCATTCAGCTTCTCAACC +
Preference number: 5 (lower is better)
Translates to: AQHTHTRDRTGSLQTPNHFPCIT*AFSFST
Trigger: GGTTGAGAAGCTGAATGCCAATGTAATGCATGGAAA...GTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCAGATGGCTTGGGCCTaGACCATTACTCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMQMAWA*TITLAQ
Trigger: CTGAGCCAGAGTAATGGTCAAGGCCCAAGCCATCTG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCCACCATTGGAGCTTTaGATGTTGATGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEPPLEL*MLMGKS
Trigger: GCTCTTCCCCATCAACATCAAAAGCTCCAATGGTGG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATCTTGGATCTTTGCTTaGGCGGGAAGAGTCTTAATC +
Preference number: 5 (lower is better)
Translates to: SRCTHSSWPGQLTAPRYVSWIFA*AGRVLI
Trigger: GATTAAGACTCTTCCCGCCAAAGCAAAGATCCAAGA...TACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTAGGAGGGCAGATGTaGCTGACTGAGGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILGGQM*LTEAEG
Trigger: CCCTTCTGCCTCAGTCAGCAACATCTGCCCTCCTAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGTCGGGGTCCAAGTCCTaGCCTTCTTTGCTGGATGTG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMSGSKS*PSLLDV
Trigger: CACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGA...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGCCAGGAAGGCATTCTaGGGCTTAGATGCATGGAGT +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPARKAF*GLDAWS
Trigger: ACTCCATGCATCTAAGCCCAAGAATGCCTTCCTGGC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATCATCATCGTCGTCCTaGTCTCCCATTGGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRSSSSS*SPIGVL
Trigger: CAACACTCCAATGGGAGACAAGGACGACGATGATGA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCAGCTGTGCAAGCAGGTaGTCCAGGGCTCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLSCASR*SRAPLS
Trigger: AGACAAGGGAGCCCTGGACAACCTGCTTGCACAGCT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTGCGCTCGTTCTTCTaGGAGACATCCTTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELRSFF*ETSFLS
Trigger: GGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTGCGATCTTCTTGATTaGGTAGGGAAGCCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEACDLLD*VGKPQY
Trigger: GTACTGAGGCTTCCCTACCAAATCAAGAAGATCGCA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGAGGACAGAGTCATCTTaGATGCAGAACTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLRERTESS*MQNFCQ
Trigger: CTGGCAGAAGTTCTGCATCAAAGATGACTCTGTCCT...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATACCAGGAAACTCACTaGCAGGAGGAAGTACAGGAC +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRYQETH*QEEVQD
Trigger: GTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCGCACTGAGGACGAGTaGGACTCCAACAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMRTEDE*DSNRKQ
Trigger: CTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGAGGCAGGTCAATCTaGACTTCTGTCTGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRGRSI*TSVCPG
Trigger: TCCCGGACAGACAGAAGTCAAGATTGACCTGCCTCT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGAGAAGTGTGTTGATGTaGGAAACGGCCTTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREERSVLM*ETAFFR
Trigger: TCGGAAGAAGGCCGTTTCCAACATCAACACACTTCT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGTACACGCGGTCAGCTTaGTCCAGAAGTGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEYTRSA*SRSVLM
Trigger: CATCAACACACTTCTGGACAAAGCTGACCGCGTGTA...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATACACGCGGTCAGCTTaGTCCAGAAGTGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRYTRSA*SRSVLM
Trigger: CATCAACACACTTCTGGACAAAGCTGACCGCGTGTA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGTCTCCACAATACTCTaGAGCCAGCTGCAGGATGTA +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEVSTIL*SQLQDV
Trigger: TACATCCTGCAGCTGGCTCAAGAGTATTGTGGAGAC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCATGGGCTCTCCCTCATaGGTCGCACACCACACCTTC +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLMGSPS*VAHHTF
Trigger: GAAGGTGTGGTGTGCGACCAATGAGGGAGAGCCCAT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCCAATCCAGGAAGACTTaGTCATCCCCACTATGGTCT +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAQSRKT*SSPLWS
Trigger: AGACCATAGTGGGGATGACAAAGTCTTCCTGGATTG...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGATACCGGCAGCAATTTaGCAGAAGCAATCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREEIPAAI*QKQSRK
Trigger: CTTCCTGGATTGCTTCTGCAAAATTGCTGCCGGTAT...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGCTGCGTCAATCTTCTaGTTCACATCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRAASIF*FTSGCS
Trigger: AGAACACCCAGATGTGAACAAGAAGATTGACGCAGC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp AAAGTCAAGAGCAGGTTTGTCAGTGGGACAGAGTCAATCAGCCGTTaGATCCTTTGTGTGGAGGTGCTCTGGGCCATAATACTCAGGACT +
Preference number: 5 (lower is better)
Translates to: KVKSRFVSGTESISR*ILCVEVLWAIILRT
Trigger: AGTCCTGAGTATTATGGCCCAGAGCACCTCCACACAAAGGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCTCTTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp TTCTTGGGCTTAGATGCATGGAGTTTCCAGAAGTGGTTTACAAGCTaGGTGATGAAACTACAGCCGTCTCCTTCCTGCTTCTGCGGCTCT +
Preference number: 5 (lower is better)
Translates to: FLGLDAWSFQKWFTS*VMKLQPSPSCFCGS
Trigger: AGAGCCGCAGAAGCAGGAAGGAGACGGCTGTAGTTTCATCACTCAGCTTGTAAACCACTTCTGGAAACTCCATGCATCTAAGCCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 90 bp TTATTCCAGGACTCACAGACAGACTGCACTGATGACGGTAAATTCTaGACTAGAGTTGGTCCCAGTGTGTTTGCCTTGCACCTACTGGAG +
Preference number: 5 (lower is better)
Translates to: LFQDSQTDCTDDGKF*TRVGPSVFALHLLE
Trigger: CTCCAGTAGGTGCAAGGCAAACACACTGGGACCAACTCTAGTGCAGAATTTACCGTCATCAGTGCAGTCTGTCTGTGAGTCCTGGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 90 bp CACTCAGGAGTCTCATCACGACCAAATGGACTTCATTCAGAGCACTaGGCTCGTTCTTCTTGGAGACATCCTTTTTGTCCATGCCCAACT +
Preference number: 5 (lower is better)
Translates to: HSGVSSRPNGLHSEH*ARSSWRHPFCPCPT
Trigger: AGTTGGGCATGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAGACTCCTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp TTGGTACGAGACATGAAGACACTCAGGAGTCTCATCACGACCAAATaGACTTCATTCAGAGCACTGCGCTCGTTCTTCTTGGAGACATCC +
Preference number: 5 (lower is better)
Translates to: LVRDMKTLRSLITTK*TSFRALRSFFLETS
Trigger: GGATGTCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAGACTCCTGAGTGTCTTCATGTCTCGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGCCCACTCCCTCCTTaGTACGAGAAAGGATGTCTC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLISPLPP*YEKGCL
Trigger: GAGACATCCTTTCTCGTACAAAGGAGGGAGTGGGCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGAGAGTCAATCAGCCGTaGAATCCTTTGTGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTERVNQP*NPLCGG
Trigger: ACCTCCACACAAAGGATTCAACGGCTGATTGACTCT...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGCTCGGGCTTCATGCCTaGTTTGATAAGGTGATCCTT +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTELGLHA*FDKVIL
Trigger: AAGGATCACCTTATCAAACAAGGCATGAAGCCCGAG...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCCAGATGGCTTGGGCCTaGACCATTACTCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLQMAWA*TITLAQ
Trigger: CTGAGCCAGAGTAATGGTCAAGGCCCAAGCCATCTG...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTTCTTGCCTTCCTCGTaGAAAAGGAAGGTAACGTCT +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAFLPSS*KRKVTS
Trigger: AGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGATTGGAGCTTTTGATGTaGATGGGGAAGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRLELLM*MGKSCN
Trigger: GTTGCAGCTCTTCCCCATCAACATCAAAAGCTCCAA...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ACACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGAGGGGTTGCCATTGTaGACATTTTCAGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TRDRTGSLQTPNHSEKTEEGLPL*TFSAVS
Trigger: GGAAACAGCTGAAAATGTCAACAATGGCAACCCCTC...CTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTGGAGACATCCTTTTaGTCCATGCCCAACTCGGCG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILETSF*SMPNSA
Trigger: CGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTACATCCTTGTTCTTCTaGCTGGTTGGGGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLITSLFF*LVGAGG
Trigger: ACCACCTGCCCCAACCAGCAAGAAGAACAAGGATGT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGACATCCTTGTTCTTCTaGCTGGTTGGGGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMTSLFF*LVGAGG
Trigger: ACCACCTGCCCCAACCAGCAAGAAGAACAAGGATGT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCGGTGGAGCTCTGACTaGCTGGGGGATTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFRWSSD*LGDFPL
Trigger: CAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGTCTCGTCGATGAGCTaGGTCCTCTGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGVSSMS*VLCSTS
Trigger: GCTGGTGCTGCAGAGGACCAAGCTCATCGACGAGAC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACCAGTCCTGGCAGATCTaGTTCTTTATGTCCCTCATA +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYQSWQI*FFMSLI
Trigger: TATGAGGGACATAAAGAACAAGATCTGCCAGGACTG...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGCCATTGCTGTTGTTCTaGATACCGGCAGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREPLLLF*IPAAIL
Trigger: CAAAATTGCTGCCGGTATCAAGAACAACAGCAATGG...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTCAGCATCCAAATTCTaGGCACTGGGGATATGCTTT +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYSASKF*ALGICF
Trigger: AAAGCATATCCCCAGTGCCAAGAATTTGGATGCTGA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTGATGTCATGGATGTaGAGCTGGTACGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILMSWM*SWYVGS
Trigger: GGAGCCCACGTACCAGCTCAACATCCATGACATCAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGTGTATTCTGCAGGTTaGGGGACTGTAGGTCAGAAG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMVYSAG*GTVGQK
Trigger: CTTCTGACCTACAGTCCCCAAACCTGCAGAATACAC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp ATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGAGTCGTACTTGACAGGCTaGGAGAAAAGAACTTCACAT +
Preference number: 5 (lower is better)
Translates to: IEQEAYRPQTTPRKLREESYLTG*EKRTSH
Trigger: ATGTGAAGTTCTTTTCTCCAAGCCTGTCAAGTACGA...CTCCTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTCGCCAGGATCCAATGTaGGGAAACTCATTGGTATTG +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPRQDPM*GNSLVL
Trigger: CAATACCAATGAGTTTCCCAACATTGGATCCTGGCG...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTGTGACAGGTATTTCTaGCATCTGCCCAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLCDRYF*HLPSQS
Trigger: GGACTGGCTGGGCAGATGCAAGAAATACCTGTCACA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTACTTTCCATGCATTACATaGGCATTCAGCTTCTCAACC +
Preference number: 5 (lower is better)
Translates to: QLHSLRSTHTHVIEQEAYFPCIT*AFSFST
Trigger: GGTTGAGAAGCTGAATGCCAATGTAATGCATGGAAA...GTAGGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCCATGTCTTGGATCTTaGCTTTGGCGGGAAGAGTCT +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMPCLGS*LWREES
Trigger: AGACTCTTCCCGCCAAAGCAAAGATCCAAGACATGG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAATGGCAACCATGTCTaGGATCTTTGCTTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLINGNHV*DLCFGG
Trigger: CCCGCCAAAGCAAAGATCCAAGACATGGTTGCCATT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGACTCGAATCAGAGCTaGTTTACAGGAGAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPDSNQS*FTGEAH
Trigger: GTGAGCTTCTCCTGTAAACAAGCTCTGATTCGAGTC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACGTCCTTGTCTCCCATaGGAGTGTTGCTTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRPCLP*ECCFEG
Trigger: CCCCTCGAAGCAACACTCCAATGGGAGACAAGGACG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAAGATTTGGACTGAGTaGTGGCTTGTCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPKIWTE*WLVQNW
Trigger: CCAGTTCTGGACAAGCCACAACTCAGTCCAAATCTT...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGGTCTCCACAATACTCTaGAGCCAGCTGCAGGATGTA +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMVSTIL*SQLQDV
Trigger: TACATCCTGCAGCTGGCTCAAGAGTATTGTGGAGAC...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTAGGTACGTATTATTCCAACAGCTCTTaGCGTGAAGCAAAAACTTTC +
Preference number: 5 (lower is better)
Translates to: QDVHTQAGRDSSQLLGTYYSNSS*REAKTF
Trigger: GAAAGTTTTTGCTTCACGCAAAGAGCTGTTGGAATA...ATACGTACCTAGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAGTGCAGTGGAGACTTaGCCAATGATCAGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSSAVET*PMIRSF
Trigger: GAACGACCTGATCATTGGCAAAGTCTCCACTGCACT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGCAAGAGCATCACCAGTaGATCCTTGTCACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMQEHHQ*ILVTCE
Trigger: CTCACAGGTGACAAGGATCAACTGGTGATGCTCTTG...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp CTGTGGACTGATGGGAGGAGATGGTACAGTTCTAGGGTTAAAAACTaGGGTCAGCTGGTTCAAAAAGTTCATCTGTACCTCCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LWTDGRRWYSSRVKN*GQLVQKVHLYLLLP
Trigger: AGGCAGAAGGAGGTACAGATGAACTTTTTGAACCAGCTGACCTCAGTTTTTAACCCTAGAACTGTACCATCTCCTCCCATCAGTCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp GTTCTTGCCTTCCTCGTTGAAAAGGAAGGTAACGTCTCTTATCTTTaGGCTCGGCAGGAGGAAGTAGAAGGTTGGACTCAAGGCATCAAT +
Preference number: 5 (lower is better)
Translates to: VLAFLVEKEGNVSYL*ARQEEVEGWTQGIN
Trigger: ATTGATGCCTTGAGTCCAACCTTCTACTTCCTCCTGCCGAGCTCAAAGATAAGAGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGGAACCCCCAAGCTCTaGAAGGCTAGCCACATTCTG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGGTPKL*KASHIL
Trigger: CAGAATGTGGCTAGCCTTCAAGAGCTTGGGGGTTCC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCATGAAGTTCAGGATGTaGGAAGCCAGGCCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLMKFRM*EARPEN
Trigger: GTTCTCAGGCCTGGCTTCCAACATCCTGAACTTCAT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGAGGGAAACTCATTGGTATaGATGTTATTCCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: VIEQEAYRPQTTPRKLREGNSLV*MLFQDS
Trigger: TGAGTCCTGGAATAACATCAATACCAATGAGTTTCC...CTCCCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CACGTGATAGAACAGGAAGCCTACAGACCCCAAACCACTCCGAGAAAACTGAGGGGAAACTCATTGGTATaGATGTTATTCCAGGACTCA +
Preference number: 5 (lower is better)
Translates to: HVIEQEAYRPQTTPRKLRGNSLV*MLFQDS
Trigger: TGAGTCCTGGAATAACATCAATACCAATGAGTTTCC...CCTCAGTTTTCTCGGAGTGGTTTGGGGTCTGTAGGCTTCCTGTTCTATCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCTGCAGCACTGTGATCTaGCCCTTCTCATGGCTAACA +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLCSTVI*PFSWLT
Trigger: TGTTAGCCATGAGAAGGGCAAGATCACAGTGCTGCA...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAGACACTGCACAGCTTaGCTCAACAAGGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRHCTA*LNKAWS
Trigger: GGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTCT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAAGTCCTTGCCTTCTTaGCTGGATGTGTTGAGACAC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIKSLPS*LDVLRH
Trigger: GTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTCCATGGGGATGAAGTCCTTGCCTTCTTaGCTGGATGTGTTGAGACAC +
Preference number: 5 (lower is better)
Translates to: EMNEGRMQASFNLISMGMKSLPS*LDVLRH
Trigger: GTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTT...CATCCCCATGGAAATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACCATGTGTAGCCTGTaGCTAGTGTGCACATCTCCT +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLTMCSL*LVCTSP
Trigger: AGGAGATGTGCACACTAGCAACAGGCTACACATGGT...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGAAGTGTGTTGATGTaGGAAACGGCCTTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRSVLM*ETAFFR
Trigger: TCGGAAGAAGGCCGTTTCCAACATCAACACACTTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTTTGTCCAGAAGTGTGTaGATGTTGGAAACGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLILSRSV*MLETAF
Trigger: GAAGGCCGTTTCCAACATCAACACACTTCTGGACAA...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp AGACAACTTCATAGCCTGCGCAGCACACACACACACGTGATAGAACAGGAAGCCTATTCCAACAGCTCTTaGCGTGAAGCAAAAACTTTC +
Preference number: 5 (lower is better)
Translates to: RQLHSLRSTHTHVIEQEAYSNSS*REAKTF
Trigger: GAAAGTTTTTGCTTCACGCAAAGAGCTGTTGGAATA...GGCTTCCTGTTCTATCACGTGTGTGTGTGTGCTGCGCAGGCTATGAAGTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCTGGGGGATTTCCCATaGCCATCCACCCCTCGGATA +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMLGDFP*PSTPRI
Trigger: TATCCGAGGGGTGGATGGCAATGGGAAATCCCCCAG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTGCTGCGTCAATCTTCTaGTTCACATCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIAASIF*FTSGCS
Trigger: AGAACACCCAGATGTGAACAAGAAGATTGACGCAGC...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 90 bp AGGACTCACAGATGGAAGATTTGGATCCAGACTTGGTACGAGACATaGAGACACTCAGGAGTCTCATCACGACCAAATGGACTTCATTCA +
Preference number: 5 (lower is better)
Translates to: RTHRWKIWIQTWYET*RHSGVSSRPNGLHS
Trigger: TGAATGAAGTCCATTTGGTCGTGATGAGACTCCTGAGTGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATCTTCCATCTGTGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 90 bp CCTGTCCAATCATGTCGTAGATCTCAAGACATTTCTGAACAATCGTaGCTGCATCACTTTCGTAGTCATCTTCTTTGGAGCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: PVQSCRRSQDISEQS*LHHFRSHLLWSLWT
Trigger: GGTCCACAAGCTCCAAAGAAGATGACTACGAAAGTGATGCAGCCACGATTGTTCAGAAATGTCTTGAGATCTACGACATGATTGGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCTCCACCTGCAAGTCTaGAAAGAGAGACGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMLHLQV*KERRQQ
Trigger: CTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGTCAGCTGGAAGAGTTaGGTGAAGAATTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPVSWKS*VKNFKT
Trigger: AGTCTTGAAATTCTTCACCAAACTCTTCCAGCTGAC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GACAGCTCACAGCTCCTAGGTACGTATAGGTCCTTCAATGGCTTGAGCTACAGAAGACTGATAATTTTATaGTTCACCAGGAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: DSSQLLGTYRSFNGLSYRRLIIL*FTRSSI
Trigger: GATGGAGCTCCTGGTGAACAATAAAATTATCAGTCT...TCTGTAGCTCAAGCCATTGAAGGACCTATACGTACCTAGGAGCTGTGAGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCCGCAGGAAGAGCAGTTaGATGTCATGGATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFRRKSS*MSWMLS
Trigger: GCTCAACATCCATGACATCAAACTGCTCTTCCTGCG...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS GCA 90 bp TCCAATCATGTCGTAGATCTCAAGACATTTCTGAACAATCGTGGCTaGATCACTTTCGTAGTCATCTTCTTTGGAGCTTGTGGACCCTGT +
Preference number: 5 (lower is better)
Translates to: SNHVVDLKTFLNNRG*ITFVVIFFGACGPC
Trigger: ACAGGGTCCACAAGCTCCAAAGAAGATGACTACGAAAGTGATGCAGCCACGATTGTTCAGAAATGTCTTGAGATCTACGACATGATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGAGCACTGTCACATCTaGCAGACGAGAAGGATTGAG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGEHCHI*QTRRIE
Trigger: CTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCTC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp GGCAAGCAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAGAGTCAATCAGCCGTaGAATCCTTTGTGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GKQQLDPFPMCTKSFIYFRVNQP*NPLCGG
Trigger: ACCTCCACACAAAGGATTCAACGGCTGATTGACTCT...GAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTCCTGGTTCATGTAAGTCTTaGAAGGTGGCAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: SFISRCTHSSWPGQLTAPGSCKS*KVAKFL
Trigger: TAGGAATTTTGCCACCTTCAAAGACTTACATGAACC...AGGAGCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCATGACAATGATGTTCTaGCCTTCCTCGTTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSMTMMF*PSSLKR
Trigger: CCTTTTCAACGAGGAAGGCAAGAACATCATTGTCAT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCTGGATCAGAGTTTCTTaGTCTGCAAATCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSWIRVS*SANLFS
Trigger: GCTGAACAGATTTGCAGACAAAGAAACTCTGATCCA...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATGGGCATGGATCTCATaGCAGTACGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGWAWIS*QYGFTV
Trigger: CACAGTGAAACCGTACTGCAATGAGATCCATGCCCA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGTCTGTCCACTTCTCTTaGGGCTGTTCCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMSVHFS*GCSRKP
Trigger: AGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGA...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGTCAGCTGGAAGAGTTaGGTGAAGAATTTCAAGACT +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLVSWKS*VKNFKT
Trigger: AGTCTTGAAATTCTTCACCAAACTCTTCCAGCTGAC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGACAGCAGGATCATGGTaGTACGTTGCTGCTCATTGC +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMTAGSW*YVAAHC
Trigger: GCAATGAGCAGCAACGTACAACCATGATCCTGCTGT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAGGAGAGGGGTTGCCATaGTTGACATTTTCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGGEGLP*LTFSAV
Trigger: AACAGCTGAAAATGTCAACAATGGCAACCCCTCTCC...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGACCATGTGTAGCCTGTaGCTAGTGTGCACATCTCCT +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMTMCSL*LVCTSP
Trigger: AGGAGATGTGCACACTAGCAACAGGCTACACATGGT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATGCGATCTTCTTGATTaGGTAGGGAAGCCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGCDLLD*VGKPQY
Trigger: GTACTGAGGCTTCCCTACCAAATCAAGAAGATCGCA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAGGACAGAGTCATCTTaGATGCAGAACTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGRTESS*MQNFCQ
Trigger: CTGGCAGAAGTTCTGCATCAAAGATGACTCTGTCCT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGACAACCACTGGCGTTTaGATGTTCACAGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMTTTGV*MFTAMR
Trigger: CCTCATGGCTGTGAACATCAAAACGCCAGTGGTTGT...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGCCAGATTGTAGCGCTTaGCTGTCTCAATGCACACAG +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMPDCSA*LSQCTQ
Trigger: CTGTGTGCATTGAGACAGCAAAGCGCTACAATCTGG...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp AGTGCACACGGAGAGATGAATGAGGGGAGAATGCAAGCTAGCTTCAATCTCATTAGACTGATAATTTTATaGTTCACCAGGAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SAHGEMNEGRMQASFNLIRLIIL*FTRSSI
Trigger: GATGGAGCTCCTGGTGAACAATAAAATTATCAGTCT...AATGAGATTGAAGCTAGCTTGCATTCTCCCCTCATTCATCTCTCCGTGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCCCTTTCTGTATGAAGTaGAAAGTAAAGTCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSPFCMK*KVKSRA
Trigger: TGCTCTTGACTTTACTTTCAACTTCATACAGAAAGG...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCGGTTCATGTAAGTCTTaGAAGGTGGCAAAATTCCTA +
Preference number: 5 (lower is better)
Translates to: LSHSFISRCTHSSWPGQLGSCKS*KVAKFL
Trigger: TAGGAATTTTGCCACCTTCAAAGACTTACATGAACC...GAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACAGCTCACAGCAAGGTACACAGCTTATaGCAAAGAGAATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: SFIYFKMYTLKLAGTAHSKVHSL*QRESSS
Trigger: TGATGAAGATTCTCTTTGCAATAAGCTGTGTACCTT...GCTGTGAGCTGTCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATTCTTGCCTTCCTCGTaGAAAAGGAAGGTAACGTCT +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGFLPSS*KRKVTS
Trigger: AGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGATCTTGGATCTTTGCTTaGGCGGGAAGAGTCTTAATC +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGSWIFA*AGRVLI
Trigger: GATTAAGACTCTTCCCGCCAAAGCAAAGATCCAAGA...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGGACTCGAATCAGAGCTaGTTTACAGGAGAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMDSNQS*FTGEAH
Trigger: GTGAGCTTCTCCTGTAAACAAGCTCTGATTCGAGTC...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGACCATTGCTGTTGTTCTaGATACCGGCAGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGPLLLF*IPAAIL
Trigger: CAAAATTGCTGCCGGTATCAAGAACAACAGCAATGG...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAATGACAATGATGTTCTaGCCTTCCTCGTTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGMTMMF*PSSLKR
Trigger: CCTTTTCAACGAGGAAGGCAAGAACATCATTGTCAT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS-3UTR CAA 90 bp CAGCAGCTAGACCCCTTTCCAATGTGTACTAAGTCATTCATTTATTTCAAGATGGATTTGGATCCAGACTaGGTACGAGACATGAAGACA +
Preference number: 5 (lower is better)
Translates to: QQLDPFPMCTKSFIYFKMDLDPD*VRDMKT
Trigger: TGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATC...CATCTTGAAATAAATGAATGACTTAGTACACATTGGAAAGGGGTCTAGCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS-3UTR CAA 90 bp TGTGTACTAAGTCATTCATTTATTTCAAGATGTACACACTCAAGCTGGCCGGGAAAGGTACACAGCTTATaGCAAAGAGAATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: CVLSHSFISRCTHSSWPGKVHSL*QRESSS
Trigger: TGATGAAGATTCTCTTTGCAATAAGCTGTGTACCTT...TCCCGGCCAGCTTGAGTGTGTACATCTTGAAATAAATGAATGACTTAGTACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GGTGCTGATGGCGCCTGTGCTAGAGCTGACGCTCCCTaGTCCAGCCGGGTGCCCCTCAGCTGTGGCGTCACC +
Preference number: 6 (lower is better)
Translates to: GADGACARADAP*SSRVPLSCGVT
Trigger: GGTGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGGGAGCGTCAGCTCTAGCACAGGCGCCATCAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp TTCGGGGGCGATGTTGTCATGCGGGTGAGCCAGGCCTaGAGGCGTACCGGCTCCACACACGCAAGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: FGGDVVMRVSQA*RRTGSTHASWA
Trigger: CGCCCAGCTTGCGTGTGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCGCATGACAACATCGCCCCCGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CCGGGTGCCCCTCAGCTGTGGCGTCACCATATGCACTaGTCCGGCCAGACACACTGTGCTCGCCAGCCACCG +
Preference number: 6 (lower is better)
Translates to: PGAPQLWRHHMH*SGQTHCARQPP
Trigger: CGGTGGCTGGCGAGCACAGTGTGTCTGGCCGGAGCAGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GCACTTCCCCCGCTCTCTGAGCCCACACTACCGCCATaGTCAGCTGGCGAGGTCCGCAGGGTGGAGCCGTCA +
Preference number: 6 (lower is better)
Translates to: ALPPLSEPTLPP*SAGEVRRVEPS
Trigger: TGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTAGTGTGGGCTCAGAGAGCGGGGGAAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp TCCAGCCGGGTGCCCCTCAGCTGTGGCGTCACCATATaGACTGCTCCGGCCAGACACACTGTGCTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSRVPLSCGVTI*TAPARHTVLAS
Trigger: GCTGGCGAGCACAGTGTGTCTGGCCGGAGCAGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CCGAGCGGCTGCTGTGCAGACTGGCCAGGAGGCTCTTaGATTGCTGCTGGACACTGGCAGGCGCTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PSGCCADWPGGS*IAAGHWQALAG
Trigger: CCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GGTCAGAATCCTTCGGGGGCGATGTTGTCATGCGGGTaGGCCAGGCCTGCAGGCGTACCGGCTCCACACACG +
Preference number: 6 (lower is better)
Translates to: GQNPSGAMLSCG*ARPAGVPAPHT
Trigger: CGTGTGTGGAGCCGGTACGCCTGCAGGCCTGGCTCACCCGCATGACAACATCGCCCCCGAAGGATTCTGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TCAGCTTCCGGTCGGCCTGCAGGGCCTCCTCTCTGGTaGAGGGGAAGTCAAACCAGCGGGAGCGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: SASGRPAGPPLW*RGSQTSGSGSG
Trigger: ACCTGAGCCGCTCCCGCTGGTTTGACTTCCCCTTCACCAGAGAGGAGGCCCTGCAGGCCGACCGGAAGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CGAGCGGCTGCTGTGCAGACTGGCCAGGAGGCTCTTTaGTTGCTGCTGGACACTGGCAGGCGCTGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: RAAAVQTGQEAL*LLLDTGRRWQG
Trigger: TCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp AGAGTACCTGCCGCAGCCAGTTGTTGTGGCCCAGCTTaGGGTCAAGTGGGGTGGTCCTCTTCCCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: RVPAAASCCGPA*GQVGWSSSPAG
Trigger: GCCGGCGGGGGAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp ACCAGCGGGAGCGGCTCAGGTTCAGCTGCATGGTCCTaGCGAAGATCTCGATGTAGGACGGGGCCCGCTCGA +
Preference number: 6 (lower is better)
Translates to: TSGSGSGSAAWS*RRSRCRTGPAR
Trigger: TCGAGCGGGCCCCGTCCTACATCGAGATCTTCGGCAGGACCATGCAGCTGAACCTGAGCCGCTCCCGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CCTGTGCTAGAGCTGACGCTCCCTGGTCCAGCCGGGTaGCCCTCAGCTGTGGCGTCACCATATGCACTGCTC +
Preference number: 6 (lower is better)
Translates to: PVLELTLPGPAG*PSAVASPYALL
Trigger: GAGCAGTGCATATGGTGACGCCACAGCTGAGGGGCACCCGGCTGGACCAGGGAGCGTCAGCTCTAGCACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CACTACCGCCATGGTCAGCTGGCGAGGTCCGCAGGGTaGAGCCGTCAGTTGCTGCAGTGCTGCCCTCGTCAT +
Preference number: 6 (lower is better)
Translates to: HYRHGQLARSAG*SRQLLQCCPRH
Trigger: ATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CCGCAGCCAGTTGTTGTGGCCCAGCTTGAGGTCAAGTaGGGTGGTCCTCTTCCCCCGCCGGCTCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: PQPVVVAQLEVK*GGPLPPPAQEL
Trigger: CAGTTCCTGAGCCGGCGGGGGAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TACCGCCATGGTCAGCTGGCGAGGTCCGCAGGGTGGAGCCGTCAGTaGCTGCAGTGCTGCCCTCGTCATCTGAGGCTGGAGCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: YRHGQLARSAGWSRQ*LQCCPRHLRLELML
Trigger: CAGCATCAGCTCCAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CAA 90 bp GGGACATGGGGGCCCCAGACCGGAAGGAGCCCATTGCACTTCGTGTaGGCGTTCTGCAGGGCAGCACTCTCCCACTCTTCCCGGCCTCTA +
Preference number: 6 (lower is better)
Translates to: GTWGPQTGRSPLHFV*AFCRAALSHSSRPL
Trigger: TAGAGGCCGGGAAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCCCCATGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TACCGCCATGGTCAGCTGGCGAGGTCCGCAGGGTGGAGCCGTCAGTaGCTGCAGTGCTGCCCTCGTCATCTGAGGCTGGAGCTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: YRHGQLARSAGWSRQ*LQCCPRHLRLELAG
Trigger: ACCAGCAAGCTCCAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCTCGCCAGCTGACCATGGCGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GGAGCCGTCAGTTGCTGCAGTGCTGCCCTCGTCATCTaGGGCTGGAGCTTGCTGGTCCTGCTGCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GAVSCCSAALVI*GWSLLVLLQAQ
Trigger: CTGAGCCTGCAGCAGGACCAGCAAGCTCCAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp AGGTCCGCAGGGTGGAGCCGTCAGTTGCTGCAGTGCTaGCCTCGTCATCTGAGGCTGGAGCTGATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RSAGWSRQLLQC*PRHLRLELMLW
Trigger: CCACAGCATCAGCTCCAGCCTCAGATGACGAGGGCAGCACTGCAGCAACTGACGGCTCCACCCTGCGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CCA 72 bp TGCCGAAGATCTCGATGTAGGACGGGGCCCGCTCGATaGCCTGCGTCCCAATCTGGATCCGCATGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: CRRSRCRTGPAR*PASQSGSACPS
Trigger: TGACGGGCATGCGGATCCAGATTGGGACGCAGGCCATCGAGCGGGCCCCGTCCTACATCGAGATCTTCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GGCCCCAGACCGGAAGGAGCCCATTGCACTTCGTGTTaGCGTTCTGCAGGGCAGCACTCTCCCACTCTTCCC +
Preference number: 6 (lower is better)
Translates to: GPRPEGAHCTSC*RSAGQHSPTLP
Trigger: GGGAAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp AAGAGTACCTGCCGCAGCCAGTTGTTGTGGCCCAGCTaGAGGTCAAGTGGGGTGGTCCTCTTCCCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: KSTCRSQLLWPS*RSSGVVLFPRR
Trigger: CCGGCGGGGGAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GGGCCCCAGACCGGAAGGAGCCCATTGCACTTCGTGTaGGCGTTCTGCAGGGCAGCACTCTCCCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: GPQTGRSPLHFV*AFCRAALSHSS
Trigger: GGAAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TGTGGTAGGCCGAGCGGCTGCTGTGCAGACTGGCCAGGAGGCTCTTaGATTGCTGCTGGACACTGGCAGGCGCTGGCAGGGAGAGCAACA +
Preference number: 6 (lower is better)
Translates to: CGRPSGCCADWPGGS*IAAGHWQALAGRAT
Trigger: TGTTGCTCTCCCTGCCAGCGCCTGCCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GCGTGTCATACTGCAAAGCGGAGCCGGAACTGGCTGTaGCCACACTGGCCCGGAGGAAGATGCCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: ACHTAKRSRNWL*PHWPGGRCPAP
Trigger: AGGAGCAGGGCATCTTCCTCCGGGCCAGTGTGGTCACAGCCAGTTCCGGCTCCGCTTTGCAGTATGACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CGCCACGGCGGAGGTTGTAATCAAAGAGCTCTCGGATaGGGCCCTGGGAGACGAGGATGTGTCGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RHGGGCNQRALG*GPGRRGCVAGL
Trigger: CAGCCCTGCGACACATCCTCGTCTCCCAGGGCCTCATCCGAGAGCTCTTTGATTACAACCTCCGCCGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp GCTCTCACGGCCGCCCCCACCGGTGTCTGCACTGAATaGCTGCTCCATGGCGAAGCGCAGGAAGAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: ALTAAPTGVCTE*LLHGEAQEEQF
Trigger: AAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTGGGGGCGGCCGTGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TGTTGCTCTCACGGCCGCCCCCACCGGTGTCTGCACTaGATGACTGCTCCATGGCGAAGCGCAGGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: CCSHGRPHRCLH*MTAPWRSAGRA
Trigger: TGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTGGGGGCGGCCGTGAGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp AGTACGTGTTGGAGTCGGTGGAGGCGCTGGCATCACTaGTCATGGAGCCCTTCCTCTGCCGCTGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: STCWSRWRRWHH*SWSPSSAAAGH
Trigger: GTGTCCTGCAGCGGCAGAGGAAGGGCTCCATGAGCAGTGATGCCAGCGCCTCCACCGACTCCAACACGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CGAGGCGATGAGCTTCTGGTAGAGAGCCAGGTACTCTaGAGCACACTCCCCCGCAACGCTGAGCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: RGDELLVESQVL*STLPRNAELVQ
Trigger: CTGGACGAGCTCAGCGTTGCGGGGGAGTGTGCTGCAGAGTACCTGGCTCTCTACCAGAAGCTCATCGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp AGTCAAACCAGCGGGAGCGGCTCAGGTTCAGCTGCATaGTCCTGCCGAAGATCTCGATGTAGGACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SQTSGSGSGSAA*SCRRSRCRTGP
Trigger: GGGCCCCGTCCTACATCGAGATCTTCGGCAGGACCATGCAGCTGAACCTGAGCCGCTCCCGCTGGTTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp AGCTGGTACGTGGGCTCCCGCTGGCCGGTACACTCCTaGAGGTACGTGTTGTGCCTTGCTAAGCAAGTGGCG +
Preference number: 6 (lower is better)
Translates to: SWYVGSRWPVHS*RYVLCLAKQVA
Trigger: CGCCACTTGCTTAGCAAGGCACAACACGTACCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GGAAGCCGGTCCCATCACCGTTCGCCAGCATATCTGTaGCCATGGGGGTCAGGGTGCCCAGAAGCACAGCAC +
Preference number: 6 (lower is better)
Translates to: GSRSHHRSPAYL*PWGSGCPEAQH
Trigger: GTGCTGTGCTTCTGGGCACCCTGACCCCCATGGCAACAGATATGCTGGCGAACGGTGATGGGACCGGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TCCACACACGCAAGCTGGGCGAGAGAGCCACAGAGGTaGAGGAGGCTCGGGTTAGGGCTCTTCTCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: STHASWAREPQR*RRLGLGLFSVS
Trigger: GCTGACTGAGAAGAGCCCTAACCCGAGCCTCCTTCACCTCTGTGGCTCTCTCGCCCAGCTTGCGTGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TGGGGAAGAGCTGCAACACCTCCAGGGTGCTCCTGCTaGCAGTGGCTGCAAAGGACCTGCCCTGACTGTAGC +
Preference number: 6 (lower is better)
Translates to: WGRAATPPGCSC*QWLQRTCPDCS
Trigger: GCTACAGTCAGGGCAGGTCCTTTGCAGCCACTGTCAGCAGGAGCACCCTGGAGGTGTTGCAGCTCTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GATGTGCAGTGTCAGGCAGTGGGCCTGCCAGCGCACTaGGGACGAGTTGGACTCCAACAGGAAACAGCGCAG +
Preference number: 6 (lower is better)
Translates to: DVQCQAVGLPAH*GRVGLQQETAQ
Trigger: CTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GCCCAACAGCTGGAAGTTCTGGAAGTGCTCACCACCTaGGCGGCGGGAGCTGCTGATGGCCTGTCCAATCAT +
Preference number: 6 (lower is better)
Translates to: AQQLEVLEVLTT*AAGAADGLSNH
Trigger: ATGATTGGACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GAAGCCGGTCCCATCACCGTTCGCCAGCATATCTGTTaGCATGGGGGTCAGGGTGCCCAGAAGCACAGCACA +
Preference number: 6 (lower is better)
Translates to: EAGPITVRQHIC*HGGQGAQKHST
Trigger: TGTGCTGTGCTTCTGGGCACCCTGACCCCCATGGCAACAGATATGCTGGCGAACGGTGATGGGACCGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp AGGCCTGGTCCTTATGGCTGTGGTAGGCCGAGCGGCTaGTGTGCAGACTGGCCAGGAGGCTCTTTGATTGCT +
Preference number: 6 (lower is better)
Translates to: RPGPYGCGRPSG*CADWPGGSLIA
Trigger: AGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACCACAGCCATAAGGACCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp GAGGCACATGAGCTGGCGGACCTCCTCTCGAATGGCTaGAGCGCCACGGCGGAGGTTGTAATCAAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: EAHELADLLSNG*SATAEVVIKEL
Trigger: GAGCTCTTTGATTACAACCTCCGCCGTGGCGCTGCAGCCATTCGAGAGGAGGTCCGCCAGCTCATGTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp ACCGGAAGGAGCCCATTGCACTTCGTGTTGGCGTTCTaGAGGGCAGCACTCTCCCACTCTTCCCGGCCTCTA +
Preference number: 6 (lower is better)
Translates to: TGRSPLHFVLAF*RAALSHSSRPL
Trigger: TAGAGGCCGGGAAGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TCACGGCCGCCCCCACCGGTGTCTGCACTGAATGACTaGTCCATGGCGAAGCGCAGGAAGAGCAGTTTGATG +
Preference number: 6 (lower is better)
Translates to: SRPPPPVSALND*SMAKRRKSSLM
Trigger: CATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGACACCGGTGGGGGCGGCCGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp AAGAGGCTATTAAGCAGGCACCAGGCGCCCAACAGCTaGAAGTTCTGGAAGTGCTCACCACCTGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: KRLLSRHQAPNS*KFWKCSPPARR
Trigger: CCGCCGCGCAGGTGGTGAGCACTTCCAGAACTTCCAGCTGTTGGGCGCCTGGTGCCTGCTTAATAGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CGGTCCCATCACCGTTCGCCAGCATATCTGTTGCCATaGGGGTCAGGGTGCCCAGAAGCACAGCACACACAC +
Preference number: 6 (lower is better)
Translates to: RSHHRSPAYLLP*GSGCPEAQHTH
Trigger: GTGTGTGTGCTGTGCTTCTGGGCACCCTGACCCCCATGGCAACAGATATGCTGGCGAACGGTGATGGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TATGGCTGTGGTAGGCCGAGCGGCTGCTGTGCAGACTaGCCAGGAGGCTCTTTGATTGCTGCTGGACACTGG +
Preference number: 6 (lower is better)
Translates to: YGCGRPSGCCAD*PGGSLIAAGHW
Trigger: CCAGTGTCCAGCAGCAATCAAAGAGCCTCCTGGCCAGTCTGCACAGCAGCCGCTCGGCCTACCACAGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TGCAGGCTCGTGATGGAGTCCGTTCCAATCAGAACCTaGGTGGCAGGGTGCTGCATGGCCAGACCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: CRLVMESVPIRT*VAGCCMARPRR
Trigger: TCTTCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp TCGTCATGCCCAGAGTTCCCAGAGCCTTCTGCCTCATaGCCATGGCCATGCGCTTCTTCTCTGCCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: SSCPEFPEPSAS*PWPCASSLPGS
Trigger: AGACCCGGGCAGAGAAGAAGCGCATGGCCATGGCCATGAGGCAGAAGGCTCTGGGAACTCTGGGCATGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp TCTGCCCGGGTCTCCCTGCGGGCTGCGTCAATCTTCTaGTTCACATCTGGGTGTTCTCTCAGGGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SARVSLRAASIF*FTSGCSLRASS
Trigger: GCTGGAGGCCCTGAGAGAACACCCAGATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GAGCCTAAGGTGGGAACCATCAGCTGGTCTGTCATCTCCACACCCTaGTCCACTGTGTGCAGTTCACTGAGGGCCTGCTGGGCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: EPKVGTISWSVISTP*STVCSSLRACWALL
Trigger: CAGCAGGGCCCAGCAGGCCCTCAGTGAACTGCACACAGTGGACAAGGGTGTGGAGATGACAGACCAGCTGATGGTTCCCACCTTAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CTTGCTGCCTGTGTTGCTGGGGTAAAGAGTACCTGCCGCAGCCAGTaGTTGTGGCCCAGCTTGAGGTCAAGTGGGGTGGTCCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: LAACVAGVKSTCRSQ*LWPSLRSSGVVLFP
Trigger: GGGGAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp ATGATGCTTAGCACCTGCTCAGCCACAGCTGCTCCTCCGCTGTCCTaGCTCTCTTGCTCGGCTACCAGAGCCAGGTTCAGAGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: MMLSTCSATAAPPLS*LSCSATRARFRVPS
Trigger: GCTGGGGACTCTGAACCTGGCTCTGGTAGCCGAGCAAGAGAGCAAGGACAGCGGAGGAGCAGCTGTGGCTGAGCAGGTGCTAAGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp AAAGCTGATTCAGGGACATGGGGGCCCCAGACCGGAAGGAGCCCATaGCACTTCGTGTTGGCGTTCTGCAGGGCAGCACTCTCCCACTCT +
Preference number: 6 (lower is better)
Translates to: KADSGTWGPQTGRSP*HFVLAFCRAALSHS
Trigger: AGAGTGGGAGAGTGCTGCCCTGCAGAACGCCAACACGAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CACACAGAGTCCCCAGGTGAGCAGCCTGCACGGCACTaGTGTAACTCTCGGACGGGATGGTGTCGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: HTESPGEQPARH*CNSRTGWCRWQ
Trigger: TTGCCAACGACACCATCCCGTCCGAGAGTTACATCAGTGCCGTGCAGGCTGCTCACCTGGGGACTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp AGCCATGATACAGAGGAGTGTTGGCTCGGCGGCTGCTaGTGTCTTGGGATCCACTTGCCCACCCAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: SHDTEECWLGGC*CLGIHLPTQKG
Trigger: CCCCTTTTGGGTGGGCAAGTGGATCCCAAGACAGCAGCAGCCGCCGAGCCAACACTCCTCTGTATCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CTACTGGAGCCGATAGCCAAGACAGCTGCAAAGCCATaGAGCTTCTCCTGGGAGGGCTTCTCAGTGGACCCC +
Preference number: 6 (lower is better)
Translates to: LLEPIAKTAAKP*SFSWEGFSVDP
Trigger: GGGGTCCACTGAGAAGCCCTCCCAGGAGAAGCTGCATGGCTTTGCAGCTGTCTTGGCTATCGGCTCCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GGGTTTCCGGGCATCCTGCCCTGTAGAAAGTCCTCTTaGTGGGGGTCCTTCTCCAGGGTCACGAAGAACTCC +
Preference number: 6 (lower is better)
Translates to: GFPGILPCRKSS*WGSFSRVTKNS
Trigger: GGAGTTCTTCGTGACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp TCAGGGCCTCCAGCAGGTTCTCAGCCAGGGTCCCAATaGCCTCATCACTGGACACCTGCTCCAGCTTATGCA +
Preference number: 6 (lower is better)
Translates to: SGPPAGSQPGSQ*PHHWTPAPAYA
Trigger: TGCATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTGGGACCCTGGCTGAGAACCTGCTGGAGGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GAGCCACTGCCCGGGCATGTGAGGCCACCAGCAGCCTaGGTAGGATCTCTACTCGAATGGCTTTCCACTGTT +
Preference number: 6 (lower is better)
Translates to: EPLPGHVRPPAA*VGSLLEWLSTV
Trigger: AACAGTGGAAAGCCATTCGAGTAGAGATCCTACGCAGGCTGCTGGTGGCCTCACATGCCCGGGCAGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CATCCTCATAGTACGTGTTGGAGTCGGTGGAGGCGCTaGCATCACTGCTCATGGAGCCCTTCCTCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: HPHSTCWSRWRR*HHCSWSPSSAA
Trigger: AGCGGCAGAGGAAGGGCTCCATGAGCAGTGATGCCAGCGCCTCCACCGACTCCAACACGTACTATGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp TACAGAGGAGTGTTGGCTCGGCGGCTGCTGCTGTCTTaGGATCCACTTGCCCACCCAAAAGGGGGACTTAGC +
Preference number: 6 (lower is better)
Translates to: YRGVLARRLLLS*DPLAHPKGGLS
Trigger: GCTAAGTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGACAGCAGCAGCCGCCGAGCCAACACTCCTCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp AATCCAGCCGGTTCAAATCCTCCTCAGAGGCCTCTGTaGACAGGACGCAGTAGAACCTGGGTTGTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: NPAGSNPPQRPL*TGRSRTWVVGP
Trigger: CGGCCCCACAACCCAGGTTCTACTGCGTCCTGTCCACAGAGGCCTCTGAGGAGGATTTGAACCGGCTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp AGACAGCGGCATCCAGGGTGTAGATGGACTGCAGACTaGGGATCTCATGCAGCTGGAGGACGGCAGTGCAGT +
Preference number: 6 (lower is better)
Translates to: RQRHPGCRWTAD*GSHAAGGRQCS
Trigger: ACTGCACTGCCGTCCTCCAGCTGCATGAGATCCCCAGTCTGCAGTCCATCTACACCCTGGATGCCGCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GTGACCTTGGCCTTGTCAGCAGGAGAGGTGCTGGCATaGCGCACCAGACTTTCGGAAACCCTAGGTTCGCTC +
Preference number: 6 (lower is better)
Translates to: VTLALSAGEVLA*RTRLSETLGSL
Trigger: GAGCGAACCTAGGGTTTCCGAAAGTCTGGTGCGCCATGCCAGCACCTCTCCTGCTGACAAGGCCAAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp AAGAACTCACAACCAGCCTCTCCAGGACAGTGCCACTaGTTGTGGCAGGGGCGGCTGAGTCACTCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: KNSQPASPGQCH*LWQGRLSHSLQ
Trigger: CTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGGCTGGTTGTGAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CCA 72 bp GTGACGGCAATGGAGCGAGCTGTGATCACCAGGCGCTaGAACACCTCGGGGTCCAAGTCCTTGCCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: VTAMERAVITRR*NTSGSKSLPSL
Trigger: CAAAGAAGGCAAGGACTTGGACCCCGAGGTGTTCCAGCGCCTGGTGATCACAGCTCGCTCCATTGCCGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GTGTGGCCACAGCCTAAGACAGACAAAGCACGGTACTaGCTGGCAGTAAACGTGGGCTGGACAGACGTCCGG +
Preference number: 6 (lower is better)
Translates to: VWPQPKTDKARY*LAVNVGWTDVR
Trigger: CCGGACGTCTGTCCAGCCCACGTTTACTGCCAGCCAGTACCGTGCTTTGTCTGTCTTAGGCTGTGGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp GCTGGGGTAAAGAGTACCTGCCGCAGCCAGTTGTTGTaGCCCAGCTTGAGGTCAAGTGGGGTGGTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: AGVKSTCRSQLL*PSLRSSGVVLF
Trigger: GAAGAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CGCAGGAAGAGCAGTTTGATGTCATGGATGTTGAGCTaGTACGTGGGCTCCCGCTGGCCGGTACACTCCTGG +
Preference number: 6 (lower is better)
Translates to: RRKSSLMSWMLS*YVGSRWPVHSW
Trigger: CCAGGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp TCCATGGCGAAGCGCAGGAAGAGCAGTTTGATGTCATaGATGTTGAGCTGGTACGTGGGCTCCCGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: SMAKRRKSSLMS*MLSWYVGSRWP
Trigger: CGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GGGACTCAGTTTCAGAACTCTCCAGGACAGTGCCACTaGTTGTGGCAGGGGCGGCTGAGTCACTCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GTQFQNSPGQCH*LWQGRLSHSLQ
Trigger: CTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGTTCTGAAACTGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CCAGATAAGCAGGAGGCGAGAAAGCACAGAGAGGCCTaGGGGGTGAATGTACAGGGGCCAAGGGCCTTCGGA +
Preference number: 6 (lower is better)
Translates to: PDKQEARKHREA*GVNVQGPRAFG
Trigger: TCCGAAGGCCCTTGGCCCCTGTACATTCACCCCCAAGGCCTCTCTGTGCTTTCTCGCCTCCTGCTTATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GTCAGGCAGTGGGCCTGCCAGCGCACTGAGGACGAGTaGGACTCCAACAGGAAACAGCGCAGAAACTGGATC +
Preference number: 6 (lower is better)
Translates to: VRQWACQRTEDE*DSNRKQRRNWI
Trigger: GATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GTTGCTGGGGTAAAGAGTACCTGCCGCAGCCAGTTGTaGTGGCCCAGCTTGAGGTCAAGTGGGGTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VAGVKSTCRSQL*WPSLRSSGVVL
Trigger: GAGGACCACCCCACTTGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp CCACTGGTTGTGGCAGGGGCGGCTGAGTCACTCTCTCCAGTGCCATaGCTCTGGTTCAGGTTAGGAGGGCAGATGTTGCTGACTGAGGCA +
Preference number: 6 (lower is better)
Translates to: PLVVAGAAESLSPVP*LWFRLGGQMLLTEA
Trigger: TGCCTCAGTCAGCAACATCTGCCCTCCTAACCTGAACCAGAGCAATGGCACTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp ACAGACGCCTGGGTTGGCGGGGACAGAGGCACTGCAGCGAGGACATaGAAGGGTCTCTGTGGAGGCCTGGTAGTTCTCATAGAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: TDAWVGGDRGTAART*KGLCGGLVVLIEVC
Trigger: GCAGACTTCTATGAGAACTACCAGGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGTGCCTCTGTCCCCGCCAACCCAGGCGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TCTCGGATGAGGCCCTGGGAGACGAGGATGTGTCGCAGGGCTGGATaGGTGGCCAGGGCCCTCAGTAGTGTAATACAATGCTCCGTGACA +
Preference number: 6 (lower is better)
Translates to: SRMRPWETRMCRRAG*VARALSSVIQCSVT
Trigger: TGTCACGGAGCATTGTATTACACTACTGAGGGCCCTGGCCACCAATCCAGCCCTGCGACACATCCTCGTCTCCCAGGGCCTCATCCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TCCTCCAGCATCTCCAGCAGCATGTCCTGGGTCTCGTCGATGAGCTaGGTCCTCTGCAGCACCAGCTTCCGCAAGCACAGGTACCCATTC +
Preference number: 6 (lower is better)
Translates to: SSSISSSMSWVSSMS*VLCSTSFRKHRYPF
Trigger: GAATGGGTACCTGTGCTTGCGGAAGCTGGTGCTGCAGAGGACCAAGCTCATCGACGAGACCCAGGACATGCTGCTGGAGATGCTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp CGCTTCTTCTCTGCCCGGGTCTCCCTGCGGGCTGCGTCAATCTTCTaGTTCACATCTGGGTGTTCTCTCAGGGCCTCCAGCAGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: RFFSARVSLRAASIF*FTSGCSLRASSRFS
Trigger: TGAGAACCTGCTGGAGGCCCTGAGAGAACACCCAGATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp ATGTCTCTGACGCGAAGGGCAGCCAATGGGTCCTTCTCTTTCCCCTaGTCAGCCAGGGCTGTGGGGCTGAGGTTCAGTATGAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: MSLTRRAANGSFSFP*SARAVGLRFSMRKR
Trigger: CCTCTTCCTCATACTGAACCTCAGCCCCACAGCCCTGGCTGACAAGGGGAAAGAGAAGGACCCATTGGCTGCCCTTCGCGTCAGAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GGGAAGGTGACCTGGCTGGATGTGCGGGCTGTGATGGTAGCTGTTTaGCGCTTCCGCACAGGTTTCATGATGCTGATGACACTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GKVTWLDVRAVMVAV*RFRTGFMMLMTLLG
Trigger: GCCCAGCAGTGTCATCAGCATCATGAAACCTGTGCGGAAGCGCAAAACAGCTACCATCACAGCCCGCACATCCAGCCAGGTCACCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CTTCCAAAGAACTCACAACCAGCCTCTCCAGGACAGTGCCACTGGTaGTGGCAGGGGCGGCTGAGTCACTCTCTCCAGTGCCATTGCTCT +
Preference number: 6 (lower is better)
Translates to: LPKNSQPASPGQCHW*WQGRLSHSLQCHCS
Trigger: AGAGCAATGGCACTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGGCTGGTTGTGAGTTCTTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CAA 90 bp TCTGCACTGAATGACTGCTCCATGGCGAAGCGCAGGAAGAGCAGTTaGATGTCATGGATGTTGAGCTGGTACGTGGGCTCCCGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: SALNDCSMAKRRKSS*MSWMLSWYVGSRWP
Trigger: CGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATTCAGTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GAAGGCACTCTCTGTCCACTTCTCTTTGGGCTGTTCCAGGAAGCCTaGGAGGTTCTTCTCCTCCCGGGACGTTGCTCGGGTCGTGTTCAG +
Preference number: 6 (lower is better)
Translates to: EGTLCPLLFGLFQEA*EVLLLPGRCSGRVQ
Trigger: CTGAACACGACCCGAGCAACGTCCCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGAGAGTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp GTGGACCCTGTCCGCACTTGCTGGGCACTACCCACATaGAGGATGGCCATACACGTGGCTACACTCACACCT +
Preference number: 6 (lower is better)
Translates to: VDPVRTCWALPT*RMAIHVATLTP
Trigger: AGGTGTGAGTGTAGCCACGTGTATGGCCATCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TCTGGAAGTGCTCACCACCTGCGCGGCGGGAGCTGCTaGTGGCCTGTCCAATCATGTCGTAGATCTCAAGAC +
Preference number: 6 (lower is better)
Translates to: SGSAHHLRGGSC*WPVQSCRRSQD
Trigger: GTCTTGAGATCTACGACATGATTGGACAGGCCATCAGCAGCTCCCGCCGCGCAGGTGGTGAGCACTTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TGGTCAGTAACTGCAGCAGCTGCCGGTTCTCCTGAATaGCCTCCAGCTGGTCAGAATCCTTCGGGGGCGATG +
Preference number: 6 (lower is better)
Translates to: WSVTAAAAGSPE*PPAGQNPSGAM
Trigger: CATCGCCCCCGAAGGATTCTGACCAGCTGGAGGTCATTCAGGAGAACCGGCAGCTGCTGCAGTTACTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp AGACTTGAGCACATGGAGGCAATAGTCCACAGCCCCTaGGCTAAGCAGGGCTGCTGCCGTGGCACTGGAGAT +
Preference number: 6 (lower is better)
Translates to: RLEHMEAIVHSP*AKQGCCRGTGD
Trigger: ATCTCCAGTGCCACGGCAGCAGCCCTGCTTAGCTCAGGGGCTGTGGACTATTGCCTCCATGTGCTCAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GTGCAGCTAGGTAGACCTTCCAGTGGCACGAGGCGATaGGCTTCTGGTAGAGAGCCAGGTACTCTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: VQLGRPSSGTRR*ASGREPGTLQH
Trigger: GTGCTGCAGAGTACCTGGCTCTCTACCAGAAGCTCATCGCCTCGTGCCACTGGAAGGTCTACCTAGCTGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GGCCAAGGGCCTTCGGAGAAAGGAGCAACTCCCAGCTaGTGGAGCAGTGTATTCTGCAGGTTTGGGGACTGT +
Preference number: 6 (lower is better)
Translates to: GQGPSEKGATPS*WSSVFCRFGDC
Trigger: ACAGTCCCCAAACCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGCTCCTTTCTCCGAAGGCCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TCCTCCATGGCCTTCCGGGCCTGGCTGCTCTCCAGCTaGTTCTCCAGATACTGTAAACACTCCTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: SSMAFRAWLLSS*FSRYCKHSSRM
Trigger: CATCCTGGAGGAGTGTTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCATGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CTTCCAAAGAACTCACAACCAGCCTCTCCAGGACAGTaGCACTGGTTGTGGCAGGGGCGGCTGAGTCACTCT +
Preference number: 6 (lower is better)
Translates to: LPKNSQPASPGQ*HWLWQGRLSHS
Trigger: AGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGGCTGGTTGTGAGTTCTTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS GCA 72 bp CGTCATCATCGTCGTCCTTGTCTCCCATTGGAGTGTTaGTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RHHRRPCLPLEC*FEGRRATSRVS
Trigger: GGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp TGCCTTGCTGCCTGTGTTGCTGGGGTAAAGAGTACCTaGCGCAGCCAGTTGTTGTGGCCCAGCTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: CLAACVAGVKST*RSQLLWPSLRS
Trigger: TGACCTCAAGCTGGGCCACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp CACGATGGTACAGGCTGCCTGCCTTGCTGCCTGTGTTaGTGGGGTAAAGAGTACCTGCCGCAGCCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: HDGTGCLPCCLC*WGKEYLPQPVV
Trigger: AACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp AAGAGCTTCCACGATGGTACAGGCTGCCTGCCTTGCTaGCTGTGTTGCTGGGGTAAAGAGTACCTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: KSFHDGTGCLPC*LCCWGKEYLPQ
Trigger: CTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp AGCAAGAGCTTCCACGATGGTACAGGCTGCCTGCCTTaGTGCCTGTGTTGCTGGGGTAAAGAGTACCTGCCG +
Preference number: 6 (lower is better)
Translates to: SKSFHDGTGCLP*CLCCWGKEYLP
Trigger: CGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp AGCATGTCCTGGGTCTCGTCGATGAGCTTGGTCCTCTaGAGCACCAGCTTCCGCAAGCACAGGTACCCATTC +
Preference number: 6 (lower is better)
Translates to: SMSWVSSMSLVL*STSFRKHRYPF
Trigger: GAATGGGTACCTGTGCTTGCGGAAGCTGGTGCTGCAGAGGACCAAGCTCATCGACGAGACCCAGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CCCCAAATCCCTGATGCCCTTTGCCAGGCCCCAGTTTaGGAGAGCCCACTCCCTCCTTTGTACGAGAAAGGA +
Preference number: 6 (lower is better)
Translates to: PQIPDALCQAPV*ESPLPPLYEKG
Trigger: TCCTTTCTCGTACAAAGGAGGGAGTGGGCTCTCCCAAACTGGGGCCTGGCAAAGGGCATCAGGGATTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GAAGAAAGCACACACATAGCCACCCGTCTCAGCACGTaGGCACTGATCAGCTGCCGTATAGTCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: EESTHIATRLST*ALISCRIVWPW
Trigger: CCAGGGCCAGACTATACGGCAGCTGATCAGTGCCCACGTGCTGAGACGGGTGGCTATGTGTGTGCTTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TTCTCATGGCTAACAGCCAAATGCTGGCGGCGCCCATaGGGGGAAGAAAGCACACACATAGCCACCCGTCTC +
Preference number: 6 (lower is better)
Translates to: FSWLTAKCWRRP*GEESTHIATRL
Trigger: GAGACGGGTGGCTATGTGTGTGCTTTCTTCCCCCCATGGGCGCCGCCAGCATTTGGCTGTTAGCCATGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp AAATCCGCAGGCTGCCGTCCTCGCACAGCAGGATCATaGTTGTACGTTGCTGCTCATTGCAGGCAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: KSAGCRPRTAGS*LYVAAHCRQCA
Trigger: GGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TGCTGCCTTGCTGGTCCTGCTGCAGGCTCAGGGCAATaGCTAGTTCAACCATGGTCTCGTCGTCTGCATCAG +
Preference number: 6 (lower is better)
Translates to: CCLAGPAAGSGQ*LVQPWSRRLHQ
Trigger: CTGATGCAGACGACGAGACCATGGTTGAACTAGCCATTGCCCTGAGCCTGCAGCAGGACCAGCAAGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097822.10
CDS CCA 72 bp TCAGGCAGTGGGCCTGCCAGCGCACTGAGGACGAGTTaGACTCCAACAGGAAACAGCGCAGAAACTGGATCA +
Preference number: 6 (lower is better)
Translates to: SGSGPASALRTS*TPTGNSAETGS
Trigger: TGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp GACAAAGCACGGTACTGGCTGGCAGTAAACGTGGGCTaGACAGACGTCCGGGATGACTTGGTGGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: DKARYWLAVNVG*TDVRDDLVAAS
Trigger: AGAAGCAGCCACCAAGTCATCCCGGACGTCTGTCCAGCCCACGTTTACTGCCAGCCAGTACCGTGCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp GATGGTACAGGCTGCCTGCCTTGCTGCCTGTGTTGCTaGGGTAAAGAGTACCTGCCGCAGCCAGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: DGTGCLPCCLCC*GKEYLPQPVVV
Trigger: CACAACAACTGGCTGCGGCAGGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp TTTCCGGGCATCCTGCCCTGTAGAAAGTCCTCTTGCTaGGGGTCCTTCTCCAGGGTCACGAAGAACTCCGTG +
Preference number: 6 (lower is better)
Translates to: FPGILPCRKSSC*GSFSRVTKNSV
Trigger: CACGGAGTTCTTCGTGACCCTGGAGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CGCCCAGGAGCCCCCGCATTCGATAAACAATCCTCATaGGCTCTCCCTCATTGGTCGCACACCACACCTTCT +
Preference number: 6 (lower is better)
Translates to: RPGAPAFDKQSS*ALPHWSHTTPS
Trigger: AGAAGGTGTGGTGTGCGACCAATGAGGGAGAGCCCATGAGGATTGTTTATCGAATGCGGGGGCTCCTGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CTTGCTAAGCAAGTGGCGAAAGCTGATTCAGGGACATaGGGGCCCCAGACCGGAAGGAGCCCATTGCACTTC +
Preference number: 6 (lower is better)
Translates to: LAKQVAKADSGT*GPQTGRSPLHF
Trigger: GAAGTGCAATGGGCTCCTTCCGGTCTGGGGCCCCCATGTCCCTGAATCAGCTTTCGCCACTTGCTTAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp ATGTCATGGATGTTGAGCTGGTACGTGGGCTCCCGCTaGCCGGTACACTCCTGGAGGTACGTGTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: MSWMLSWYVGSR*PVHSWRYVLCL
Trigger: AAGGCACAACACGTACCTCCAGGAGTGTACCGGCCAGCGGGAGCCCACGTACCAGCTCAACATCCATGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp TCTGTCCACTTCTCTTTGGGCTGTTCCAGGAAGCCTTaGAGGTTCTTCTCCTCCCGGGACGTTGCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: SVHFSLGCSRKP*RFFSSRDVARV
Trigger: GACCCGAGCAACGTCCCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CAGTTTCAGAACTCTCCAGGACAGTGCCACTGGTTGTaGCAGGGGCGGCTGAGTCACTCTCTCCAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: QFQNSPGQCHWL*QGRLSHSLQCH
Trigger: ATGGCACTGGAGAGAGTGACTCAGCCGCCCCTGCCACAACCAGTGGCACTGTCCTGGAGAGTTCTGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TGTTGGCTCGGCGGCTGCTGCTGTCTTGGGATCCACTaGCCCACCCAAAAGGGGGACTTAGCAGATTGTGCT +
Preference number: 6 (lower is better)
Translates to: CWLGGCCCLGIH*PTQKGDLADCA
Trigger: AGCACAATCTGCTAAGTCCCCCTTTTGGGTGGGCAAGTGGATCCCAAGACAGCAGCAGCCGCCGAGCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp CTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCGCTaGTTCCTGGGCCTTAGGACTCGAATCAGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: LRGEEGNVTCLR*FLGLRTRIRAC
Trigger: ACAAGCTCTGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TGGGTTGGCGGGGACAGAGGCACTGCAGCGAGGACATaGAAGGGTCTCTGTGGAGGCCTGGTAGTTCTCATA +
Preference number: 6 (lower is better)
Translates to: WVGGDRGTAART*KGLCGGLVVLI
Trigger: TATGAGAACTACCAGGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGTGCCTCTGTCCCCGCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp AGACGGTGGAGCTCTGACTTGCTGGGGGATTTCCCATaGCCATCCACCCCTCGGATAGGCAGGCACTTCTTC +
Preference number: 6 (lower is better)
Translates to: RRWSSDLLGDFP*PSTPRIGRHFF
Trigger: GAAGAAGTGCCTGCCTATCCGAGGGGTGGATGGCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp CTCTGTCCACTTCTCTTTGGGCTGTTCCAGGAAGCCTaGGAGGTTCTTCTCCTCCCGGGACGTTGCTCGGGT +
Preference number: 6 (lower is better)
Translates to: LCPLLFGLFQEA*EVLLLPGRCSG
Trigger: ACCCGAGCAACGTCCCGGGAGGAGAAGAACCTCCAAGGCTTCCTGGAACAGCCCAAAGAGAAGTGGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TTTATGCTGCCAGATAAGCAGGAGGCGAGAAAGCACAGAGAGGCCTaGGGGGTGAATGTACAGGGGCCAAGGGCCTTCGGAGAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: FMLPDKQEARKHREA*GVNVQGPRAFGERS
Trigger: GCTCCTTTCTCCGAAGGCCCTTGGCCCCTGTACATTCACCCCCAAGGCCTCTCTGTGCTTTCTCGCCTCCTGCTTATCTGGCAGCATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GTCCCAATCTGGATCCGCATGCCCGTCATCACCATGGTGCTGCTGTaGTTACTGATCTCGATGGTGAAGCCGCCAGGCTTGGTGTTAGCC +
Preference number: 6 (lower is better)
Translates to: VPIWIRMPVITMVLL*LLISMVKPPGLVLA
Trigger: GGCTAACACCAAGCCTGGCGGCTTCACCATCGAGATCAGTAACAACAGCAGCACCATGGTGATGACGGGCATGCGGATCCAGATTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp GGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCGCTaGTTCCTGGGCCTTAGGACTCGAATCAGAGCTTGTTTACAGGAG +
Preference number: 6 (lower is better)
Translates to: GVLLRGEEGNVTCLR*FLGLRTRIRACLQE
Trigger: CTCCTGTAAACAAGCTCTGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp TCTGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATTGGAGTGTaGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCCGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SASSSSSSSLSPIGV*LRGEEGNVTCLRLF
Trigger: GAACAAGCGGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp ACTTTGCCAATGATCAGGTCGTTCATTTGCTGGGTGGCCTCTGGGTaGTCTCTGGTGAGGAGGCACATGAGCTGGCGGACCTCCTCTCGA +
Preference number: 6 (lower is better)
Translates to: TLPMIRSFICWVASG*SLVRRHMSWRTSSR
Trigger: TCGAGAGGAGGTCCGCCAGCTCATGTGCCTCCTCACCAGAGACAACCCAGAGGCCACCCAGCAAATGAACGACCTGATCATTGGCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp GCCAGGTCAGGATTAGCCCAGTGGCCCTTCAGTGCAGTGGAGACTTaGCCAATGATCAGGTCGTTCATTTGCTGGGTGGCCTCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: ARSGLAQWPFSAVET*PMIRSFICWVASGL
Trigger: CAACCCAGAGGCCACCCAGCAAATGAACGACCTGATCATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGGGCTAATCCTGACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CCGCAGGTCCCAAGATGCGCTCCAGAGAGTTACTGCTaGTCTCAGCAGCGCTCTCTGTGCTTGACTCCAAGA +
Preference number: 6 (lower is better)
Translates to: PQVPRCAPESYC*SQQRSLCLTPR
Trigger: TCTTGGAGTCAAGCACAGAGAGCGCTGCTGAGATCAGCAGTAACTCTCTGGAGCGCATCTTGGGACCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GCTCTGGTTCAGGTTAGGAGGGCAGATGTTGCTGACTaGGGCAGAAGGGAAGTCTTCTGGGGGCTCATCAGG +
Preference number: 6 (lower is better)
Translates to: ALVQVRRADVAD*GRREVFWGLIR
Trigger: CCTGATGAGCCCCCAGAAGACTTCCCTTCTGCCTCAGTCAGCAACATCTGCCCTCCTAACCTGAACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TCCACCTCACTCTGTTCCTGGCTTTCCTGGCGGATGTaGCCACCATCGGGGATGCCCGATGACTGCATTTTC +
Preference number: 6 (lower is better)
Translates to: STSLCSWLSWRM*PPSGMPDDCIF
Trigger: GAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAAAGCCAGGAACAGAGTGAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GGCCGTAAGCTGGCAATTCCGGCCAGATGGACCACATaGGATCTAGCAAGAGCTCCTGCTGAGCCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: GRKLAIPARWTT*DLARAPAEPCW
Trigger: CCAACAAGGCTCAGCAGGAGCTCTTGCTAGATCTCATGTGGTCCATCTGGCCGGAATTGCCAGCTTACGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp AGCAGGTTCTCCAACTGGGGCCGATGTCCCATGAGCTaGTGGTACACGCGGTCAGCTTTGTCCAGAAGTGTG +
Preference number: 6 (lower is better)
Translates to: SRFSNWGRCPMS*WYTRSALSRSV
Trigger: CACACTTCTGGACAAAGCTGACCGCGTGTACCATCAGCTCATGGGACATCGGCCCCAGTTGGAGAACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp TGCAGAGCAGGTTCTCCAACTGGGGCCGATGTCCCATaGGCTGATGGTACACGCGGTCAGCTTTGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: CRAGSPTGADVP*ADGTRGQLCPE
Trigger: TTCTGGACAAAGCTGACCGCGTGTACCATCAGCTCATGGGACATCGGCCCCAGTTGGAGAACCTGCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp GCAGGATGTAGCGATTCACACTGGCTGAAGTGGAGCTaGTGCCTCCCGCTGTTCCTGAGTCTTCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: AGCSDSHWLKWS*CLPLFLSLPVA
Trigger: AGCCACAGGAAGACTCAGGAACAGCGGGAGGCATCAGCTCCACTTCAGCCAGTGTGAATCGCTACATCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CCCAGTGGCCCTTCAGTGCAGTGGAGACTTTGCCAATaGTCAGGTCGTTCATTTGCTGGGTGGCCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: PSGPSVQWRLCQ*SGRSFAGWPLG
Trigger: ACCCAGAGGCCACCCAGCAAATGAACGACCTGATCATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CCCTCGGATAGGCAGGCACTTCTTCCAGGCTTCGTATaGTGCCTTGGGATCTCTCTTGAGCCACAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PSDRQALLPGFV*CLGISLEPQLS
Trigger: GCTCAGCTGTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAGAAGTGCCTGCCTATCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CACGTACTTCTCGGTCAAGTAGAGACGGTGGAGCTCTaGCTTGCTGGGGGATTTCCCATTGCCATCCACCCC +
Preference number: 6 (lower is better)
Translates to: HVLLGQVETVEL*LAGGFPIAIHP
Trigger: GGGGTGGATGGCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCTCTACTTGACCGAGAAGTACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp GGTCCAAGAGCATCACCAGTTGATCCTTGTCACCTGTaGGGAGGAGGTTGCCCTTGTCCTCACTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GPRASPVDPCHL*GGGCPCPHSGA
Trigger: AGCCCCTGAGTGAGGACAAGGGCAACCTCCTCCTCACAGGTGACAAGGATCAACTGGTGATGCTCTTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CATCACTGGACACCTGCTCCAGCTTATGCAGGCTCGTaGTGGAGTCCGTTCCAATCAGAACCTGGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: HHWTPAPAYAGS*WSPFQSEPGWQ
Trigger: CTGCCACCCAGGTTCTGATTGGAACGGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGTGTCCAGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CTGCGTCGAGGAACTCCGAGAAGGTCTCCACTGGCATaGACTCCTCCTGGAAGGTTTTCAGGGCTTTGTCGG +
Preference number: 6 (lower is better)
Translates to: LRRGTPRRSPLA*TPPGRFSGLCR
Trigger: CCGACAAAGCCCTGAAAACCTTCCAGGAGGAGTTCATGCCAGTGGAGACCTTCTCGGAGTTCCTCGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GAGGCTGCAGACCGTGGTGATGTAGTGCGTGGACAGTaGGACAAAGGAGGAGTAGAACGGCTCGTACTGCTT +
Preference number: 6 (lower is better)
Translates to: EAADRGDVVRGQ*DKGGVERLVLL
Trigger: AAGCAGTACGAGCCGTTCTACTCCTCCTTTGTCGCACTGTCCACGCACTACATCACCACGGTCTGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CGGCTGGCCAAGATGTTGCCCTTCTCACCAGATGCCTaGTTATTGGGGCTTTTAACCCGAGGAGAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: RLAKMLPFSPDA*LLGLLTRGELS
Trigger: GGAGAGCTCTCCTCGGGTTAAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GTCAAAGATCAAGAGGAGGCGGGCCAGGATCAGCGGTaGAGTGCGCATCTGCACCTCCATGTTAACACTCAG +
Preference number: 6 (lower is better)
Translates to: VKDQEEAGQDQR*SAHLHLHVNTQ
Trigger: CTGAGTGTTAACATGGAGGTGCAGATGCGCACTGCACCGCTGATCCTGGCCCGCCTCCTCTTGATCTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TTATGGGGGTCGGTCTCTGCGGCCATCTTAGAGAAGTaGTCATCCAGAGAGACCTGGACCTTCGAGACAGCG +
Preference number: 6 (lower is better)
Translates to: LWGSVSAAILEK*SSRETWTFETA
Trigger: CGCTGTCTCGAAGGTCCAGGTCTCTCTGGATGAGCACTTCTCTAAGATGGCCGCAGAGACCGACCCCCATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GCAGAGAGGTCCTCATTGGCTGTGGCCATCATGATCTaGACCAGCTCCCCACCATCAGAGAAGAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: AERSSLAVAIMI*TSSPPSEKNSS
Trigger: GGAGGAGTTCTTCTCTGATGGTGGGGAGCTGGTGCAGATCATGATGGCCACAGCCAATGAGGACCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTTaGTGCTCATTGCAGGCAGTGTGCCTAATGGCAACC +
Preference number: 6 (lower is better)
Translates to: LPSSHSRIMVVR*CSLQAVCLMAT
Trigger: GGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CCTGGCTTTCCTGGCGGATGTGACCACCATCGGGGATaGCCGATGACTGCATTTTCTCATCTGCGTCATCGT +
Preference number: 6 (lower is better)
Translates to: PGFPGGCDHHRG*PMTAFSHLRHR
Trigger: ACGATGACGCAGATGAGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAAAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CTTCTGCCAGTTGATGGTTCGCTGGGCGGCAATCTCTaGACAGGCCTTCAGATGCTCCATCAGGCTGATGAG +
Preference number: 6 (lower is better)
Translates to: LLPVDGSLGGNL*TGLQMLHQADE
Trigger: CTCATCAGCCTGATGGAGCATCTGAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp TGCACTTGTGACACTGGTATACATTCTCTCCACAGTTaGCACAGACGCCTGGGTTGGCGGGGACAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: CTCDTGIHSLHS*HRRLGWRGQRH
Trigger: GTGCCTCTGTCCCCGCCAACCCAGGCGTCTGTGGCAACTGTGGAGAGAATGTATACCAGTGTCACAAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp ACTTCTCGGTCAAGTAGAGACGGTGGAGCTCTGACTTaGTGGGGGATTTCCCATTGCCATCCACCCCTCGGA +
Preference number: 6 (lower is better)
Translates to: TSRSSRDGGALT*WGISHCHPPLG
Trigger: TCCGAGGGGTGGATGGCAATGGGAAATCCCCCAGCAAGTCAGAGCTCCACCGTCTCTACTTGACCGAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp CATGCGCTTCTTCTCTGCCCGGGTCTCCCTGCGGGCTaGGTCAATCTTCTTGTTCACATCTGGGTGTTCTCT +
Preference number: 6 (lower is better)
Translates to: HALLLCPGLPAG*VNLLVHIWVFS
Trigger: AGAGAACACCCAGATGTGAACAAGAAGATTGACGCAGCCCGCAGGGAGACCCGGGCAGAGAAGAAGCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp AAGCCAGGCCTGAGAACAACTCAGGGTCTTTGCGGCTaGCCAAGATGTTGCCCTTCTCACCAGATGCCTGCT +
Preference number: 6 (lower is better)
Translates to: KPGLRTTQGLCG*PRCCPSHQMPA
Trigger: AGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CACACCAAGCCAGGGTGGTTCATCACCTCGGACCACTaGCAAAGGGCAGGAGAAGTCTTACTGCCACCATTG +
Preference number: 6 (lower is better)
Translates to: HTKPGWFITSDH*QRAGEVLLPPL
Trigger: CAATGGTGGCAGTAAGACTTCTCCTGCCCTTTGCCAGTGGTCCGAGGTGATGAACCACCCTGGCTTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GAGACGGCTGGAGCCAGTAAGAGGTGTTCTCTACATTaGCCATGTAAATCCGCAGGCTGCCGTCCTCGCACA +
Preference number: 6 (lower is better)
Translates to: ETAGASKRCSLH*PCKSAGCRPRT
Trigger: TGTGCGAGGACGGCAGCCTGCGGATTTACATGGCCAATGTAGAGAACACCTCTTACTGGCTCCAGCCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GGGAGGAGGGCAACGTCACGTGTCTCCGCTTGTTCCTaGGCCTTAGGACTCGAATCAGAGCTTGTTTACAGG +
Preference number: 6 (lower is better)
Translates to: GRRATSRVSACS*ALGLESELVYR
Trigger: CCTGTAAACAAGCTCTGATTCGAGTCCTAAGGCCCAGGAACAAGCGGAGACACGTGACGTTGCCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATTaGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTCAC +
Preference number: 6 (lower is better)
Translates to: CVIVIIVVLVSH*SVASRGGGQRH
Trigger: GTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GCCAGTCTGTTCAACATGCACTGCAGACCCCCACACTaGGCCATCACACCGGCCATTCTGTACACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: ASLFNMHCRPPH*AITPAILYTSS
Trigger: AGAGGAAGTGTACAGAATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp ACTCCTGGAGGTACGTGTTGTGCCTTGCTAAGCAAGTaGCGAAAGCTGATTCAGGGACATGGGGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: TPGGTCCALLSK*RKLIQGHGGPR
Trigger: TCTGGGGCCCCCATGTCCCTGAATCAGCTTTCGCCACTTGCTTAGCAAGGCACAACACGTACCTCCAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp CTCCCAGCCCTTGTGGAGTGCCTCCACCTGCAAGTCTaGAAAGAGAGACGCCAGCAGCTTGATGGCATGGTT +
Preference number: 6 (lower is better)
Translates to: LPALVECLHLQV*KERRQQLDGMV
Trigger: AACCATGCCATCAAGCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GCTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTaGCTGCTCATTGCAGGCAGTGTGCCTAATGGCAAC +
Preference number: 6 (lower is better)
Translates to: AAVLAQQDHGCT*LLIAGSVPNGN
Trigger: GTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TGGATCCGCATGCCCGTCATCACCATGGTGCTGCTGTaGTTACTGATCTCGATGGTGAAGCCGCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: WIRMPVITMVLL*LLISMVKPPGL
Trigger: CAAGCCTGGCGGCTTCACCATCGAGATCAGTAACAACAGCAGCACCATGGTGATGACGGGCATGCGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp GTGCCATTGCTCTGGTTCAGGTTAGGAGGGCAGATGTaGCTGACTGAGGCAGAAGGGAAGTCTTCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: VPLLWFRLGGQM*LTEAEGKSSGG
Trigger: GCCCCCAGAAGACTTCCCTTCTGCCTCAGTCAGCAACATCTGCCCTCCTAACCTGAACCAGAGCAATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp ATCTGGGGCAGCTTTGACTCGGTGAAGTGCACAAGGTaGTTAGGGCGTGTGACGGCAATGGAGCGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: IWGSFDSVKCTR*LGRVTAMERAV
Trigger: CACAGCTCGCTCCATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TCGTCATCATCGTCGTCCTTGTCTCCCATTGGAGTGTaGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTC +
Preference number: 6 (lower is better)
Translates to: SSSSSSLSPIGV*LRGEEGNVTCL
Trigger: GAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CTGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATaGGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTCA +
Preference number: 6 (lower is better)
Translates to: LRHRHHRRPCLP*ECCFEGRRATS
Trigger: TGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp AGACAGCTGAGGCTGAGCACTGTCACATCTTGCAGACGAGAAGGATaGAGGGGTTCCAGCACAGGCAGGGAAAGGGTATCCAAGGCCATG +
Preference number: 6 (lower is better)
Translates to: RQLRLSTVTSCRREG*RGSSTGRERVSKAM
Trigger: CATGGCCTTGGATACCCTTTCCCTGCCTGTGCTGGAACCCCTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCTCAGCCTCAGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GCCATCTGTCTCCCAGCCCTTGTGGAGTGCCTCCACCTGCAAGTCTaGAAAGAGAGACGCCAGCAGCTTGATGGCATGGTTTGCCAGTAT +
Preference number: 6 (lower is better)
Translates to: AICLPALVECLHLQV*KERRQQLDGMVCQY
Trigger: ATACTGGCAAACCATGCCATCAAGCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGGGAGACAGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GCCAGGCCTGAGAACAACTCAGGGTCTTTGCGGCTGGCCAAGATGTaGCCCTTCTCACCAGATGCCTGCTTATTGGGGCTTTTAACCCGA +
Preference number: 6 (lower is better)
Translates to: ARPENNSGSLRLAKM*PFSPDACLLGLLTR
Trigger: TCGGGTTAAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp AATCCGCAGGCTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTaGCTGCTCATTGCAGGCAGTGTGCCTAATGGCAACCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: NPQAAVLAQQDHGCT*LLIAGSVPNGNHVL
Trigger: CAAGACATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCGGATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp ATCACCAGGCGCTGGAACACCTCGGGGTCCAAGTCCTTGCCTTCTTaGCTGGATGTGTTGAGACACTGCACAGCTTTGCTCAACAAGGCC +
Preference number: 6 (lower is better)
Translates to: ITRRWNTSGSKSLPS*LDVLRHCTALLNKA
Trigger: GGCCTTGTTGAGCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGAGGTGTTCCAGCGCCTGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp TCTGTTTCCATCTGGGGCAGCTTTGACTCGGTGAAGTGCACAAGGTaGTTAGGGCGTGTGACGGCAATGGAGCGAGCTGTGATCACCAGG +
Preference number: 6 (lower is better)
Translates to: SVSIWGSFDSVKCTR*LGRVTAMERAVITR
Trigger: CCTGGTGATCACAGCTCGCTCCATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp ATGTGCAGTGTCAGGCAGTGGGCCTGCCAGCGCACTGAGGACGAGTaGGACTCCAACAGGAAACAGCGCAGAAACTGGATCAGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: MCSVRQWACQRTEDE*DSNRKQRRNWIRVS
Trigger: AGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTCCTCAGTGCGCTGGCAGGCCCACTGCCTGACACTGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp CTGAGCTCGGGGCTTACTGGGGAGGCCAGCTCTTTCTaGTCTTCCACGTCTGAAAGCGTCTTCACTGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSSGLTGEASSF*SSTSESVFTVC
Trigger: ACAGACAGTGAAGACGCTTTCAGACGTGGAAGATCAGAAAGAGCTGGCCTCCCCAGTAAGCCCCGAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp AGCCCACTCCCTCCTTTGTACGAGAAAGGATGTCTCTaGCGCGAAGGGCAGCCAATGGGTCCTTCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: SPLPPLYEKGCL*REGQPMGPSLS
Trigger: GGAAAGAGAAGGACCCATTGGCTGCCCTTCGCGTCAGAGACATCCTTTCTCGTACAAAGGAGGGAGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TCCCAGCCCTTGTGGAGTGCCTCCACCTGCAAGTCTTaGAAGAGAGACGCCAGCAGCTTGATGGCATGGTTT +
Preference number: 6 (lower is better)
Translates to: SQPLWSASTCKS*KRDASSLMAWF
Trigger: AAACCATGCCATCAAGCTGCTGGCGTCTCTCTTTCAAGACTTGCAGGTGGAGGCACTCCACAAGGGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CGCTCTTCCCCATCCACTGACAGATGGCTTGGGCCTTaGCCATTACTCTGGCTCAGGGCATTTGTGACATCG +
Preference number: 6 (lower is better)
Translates to: RSSPSTDRWLGP*PLLWLRAFVTS
Trigger: CGATGTCACAAATGCCCTGAGCCAGAGTAATGGTCAAGGCCCAAGCCATCTGTCAGTGGATGGGGAAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TTCACCATGACCACCAGAGGCACGCCAGTAGTCTGCTaGACACAACACACCAAGCCAGGGTGGTTCATCACC +
Preference number: 6 (lower is better)
Translates to: FTMTTRGTPVVC*TQHTKPGWFIT
Trigger: GGTGATGAACCACCCTGGCTTGGTGTGTTGTGTTCAGCAGACTACTGGCGTGCCTCTGGTGGTCATGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TGGAGACATCCTTTTTGTCCATGCCCAACTCGGCGATaGGCTGTGCAAGCAGGTTGTCCAGGGCTCCCTTGT +
Preference number: 6 (lower is better)
Translates to: WRHPFCPCPTRR*AVQAGCPGLPC
Trigger: ACAAGGGAGCCCTGGACAACCTGCTTGCACAGCTCATCGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CGATGGCCTGCACAGTTCGGTTGTTGTAGTACAGGTTaGTCGTCCGCACCATCTTGGTTCGCTTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: RWPAQFGCCSTG*SSAPSWFASGP
Trigger: GGGACCTGAAGCGAACCAAGATGGTGCGGACGATCAACCTGTACTACAACAACCGAACTGTGCAGGCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp GGGCATGGATCTCATTGCAGTACGGTTTCACTGTGGTaGGGGCCTCCACGGGGACATCCTTGTTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: GHGSHCSTVSLW*GPPRGHPCSSC
Trigger: GCAAGAAGAACAAGGATGTCCCCGTGGAGGCCCTCACCACAGTGAAACCGTACTGCAATGAGATCCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GCATACAGACAGCTGAGGCTGAGCACTGTCACATCTTaGAGACGAGAAGGATTGAGGGGTTCCAGCACAGGC +
Preference number: 6 (lower is better)
Translates to: AYRQLRLSTVTS*RREGLRGSSTG
Trigger: GCCTGTGCTGGAACCCCTCAATCCTTCTCGTCTGCAAGATGTGACAGTGCTCAGCCTCAGCTGTCTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TGTTGGAAGCCAGGCCTGAGAACAACTCAGGGTCTTTaGGGCTGGCCAAGATGTTGCCCTTCTCACCAGATG +
Preference number: 6 (lower is better)
Translates to: CWKPGLRTTQGL*GWPRCCPSHQM
Trigger: CATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TCAGGGACATCAGGGTCACCTTGGGCTCCAGCTTTATaGTGCCAGATAAGCAGGAGGCGAGAAAGCACAGAG +
Preference number: 6 (lower is better)
Translates to: SGTSGSPWAPAL*CQISRRRESTE
Trigger: CTCTGTGCTTTCTCGCCTCCTGCTTATCTGGCAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TGCACCTCCATGTTAACACTCAGCTCCTGGATGCTCTaGACAAGCATGGTCAAGATGGCTCTGCGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: CTSMLTLSSWML*TSMVKMALRPF
Trigger: GAAGGGCCGCAGAGCCATCTTGACCATGCTTGTGCAGAGCATCCAGGAGCTGAGTGTTAACATGGAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CAGAGAAGAACTCCTCCATGGCCTTCCGGGCCTGGCTaGTCTCCAGCTGCTTCTCCAGATACTGTAAACACT +
Preference number: 6 (lower is better)
Translates to: QRRTPPWPSGPG*SPAASPDTVNT
Trigger: AGTGTTTACAGTATCTGGAGAAGCAGCTGGAGAGCAGCCAGGCCCGGAAGGCCATGGAGGAGTTCTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CGGGTTAGCGTCAGCTTCCTCTTACTGGAATCTGCTTaGTTCAGGAGCGCTGAGAGCTGCAGCACTGTGATC +
Preference number: 6 (lower is better)
Translates to: RVSVSFLLLESA*FRSAESCSTVI
Trigger: GATCACAGTGCTGCAGCTCTCAGCGCTCCTGAAGCAAGCAGATTCCAGTAAGAGGAAGCTGACGCTAACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CCGTCCTCGCACAGCAGGATCATGGTTGTACGTTGCTaGTCATTGCAGGCAGTGTGCCTAATGGCAACCATG +
Preference number: 6 (lower is better)
Translates to: PSSHSRIMVVRC*SLQAVCLMATM
Trigger: CATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp GCAGTGGAGACTTTGCCAATGATCAGGTCGTTCATTTaGTGGGTGGCCTCTGGGTTGTCTCTGGTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: AVETLPMIRSFI*WVASGLSLVRR
Trigger: CCTCCTCACCAGAGACAACCCAGAGGCCACCCAGCAAATGAACGACCTGATCATTGGCAAAGTCTCCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp ACAGTAGCAAGAGCTTCCACGATGGTACAGGCTGCCTaGCTTGCTGCCTGTGTTGCTGGGGTAAAGAGTACC +
Preference number: 6 (lower is better)
Translates to: TVARASTMVQAA*LAACVAGVKST
Trigger: GGTACTCTTTACCCCAGCAACACAGGCAGCAAGGCAGGCAGCCTGTACCATCGTGGAAGCTCTTGCTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp AAGCTGCAGTATGGCTTGAACCGCTCCACCAGGATCTaGATCTTCTCCACCTCTCCGAAGGACAGGTATGGG +
Preference number: 6 (lower is better)
Translates to: KLQYGLNRSTRI*IFSTSPKDRYG
Trigger: CCCATACCTGTCCTTCGGAGAGGTGGAGAAGATGCAGATCCTGGTGGAGCGGTTCAAGCCATACTGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp ATGGAGTCCGTTCCAATCAGAACCTGGGTGGCAGGGTaGTGCATGGCCAGACCCCGAAGAAGCCTCAAAATA +
Preference number: 6 (lower is better)
Translates to: MESVPIRTWVAG*CMARPRRSLKI
Trigger: TATTTTGAGGCTTCTTCGGGGTCTGGCCATGCAGCACCCTGCCACCCAGGTTCTGATTGGAACGGACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CCAATGCCCTCATCACTGGACACCTGCTCCAGCTTATaGAGGCTCGTGATGGAGTCCGTTCCAATCAGAACC +
Preference number: 6 (lower is better)
Translates to: PMPSSLDTCSSL*RLVMESVPIRT
Trigger: GGTTCTGATTGGAACGGACTCCATCACGAGCCTGCATAAGCTGGAGCAGGTGTCCAGTGATGAGGGCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TCTTGGTCACCACCTGACCCTTTTCGTTTGTCGTCATaGCCAGAGTTCCCAGAGCCTTCTGCCTCATGGCCA +
Preference number: 6 (lower is better)
Translates to: SWSPPDPFRLSS*PEFPEPSASWP
Trigger: TGGCCATGAGGCAGAAGGCTCTGGGAACTCTGGGCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GGATCTCATGCAGCTGGAGGACGGCAGTGCAGTCAATaGAGCAGAAGGACGAGATCTGTCGGGCAAAGTACT +
Preference number: 6 (lower is better)
Translates to: GSHAAGGRQCSQ*SRRTRSVGQST
Trigger: AGTACTTTGCCCGACAGATCTCGTCCTTCTGCTCCATTGACTGCACTGCCGTCCTCCAGCTGCATGAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp TATGGGATGGCCCGGACACCTCCGACATTCCGTAACTaGGGCAGTGTCTGCAGCAATCTTTCCAACAGCATC +
Preference number: 6 (lower is better)
Translates to: YGMARTPPTFRN*GSVCSNLSNSI
Trigger: GATGCTGTTGGAAAGATTGCTGCAGACACTGCCCCAGTTACGGAATGTCGGAGGTGTCCGGGCCATCCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CGTGTTCAGGACGTAAAGCACAGTGTGAATGATGTATaGGATCAGGTGGATGTTGCTCTCACGGCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: RVQDVKHSVNDV*DQVDVALTAAP
Trigger: GGGGGCGGCCGTGAGAGCAACATCCACCTGATCCCATACATCATTCACACTGTGCTTTACGTCCTGAACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GGAAGGTTTTCAGGGCTTTGTCGGCAGCTTCGTAGATaGGCATGTCATTGTGGCGGATGTACTCGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GRFSGLCRQLRR*ACHCGGCTRPE
Trigger: CTCTGGCCGAGTACATCCGCCACAATGACATGCCCATCTACGAAGCTGCCGACAAAGCCCTGAAAACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp ACCTGCTGCGTCGAGGAACTCCGAGAAGGTCTCCACTaGCATGAACTCCTCCTGGAAGGTTTTCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TCCVEELREGLH*HELLLEGFQGF
Trigger: AAAGCCCTGAAAACCTTCCAGGAGGAGTTCATGCCAGTGGAGACCTTCTCGGAGTTCCTCGACGCAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp CGCTGGAACACCTCGGGGTCCAAGTCCTTGCCTTCTTaGCTGGATGTGTTGAGACACTGCACAGCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: RWNTSGSKSLPS*LDVLRHCTALL
Trigger: GAGCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGAGGTGTTCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp GGATTAGCCCAGTGGCCCTTCAGTGCAGTGGAGACTTaGCCAATGATCAGGTCGTTCATTTGCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GLAQWPFSAVET*PMIRSFICWVA
Trigger: GGCCACCCAGCAAATGAACGACCTGATCATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGGGCTAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GGGATGATACGCAGCAAGCCCTGTAGCACGCTAGGGTaGGATCGAACGAAGGTGCTGTTGATCTGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: GMIRSKPCSTLG*DRTKVLLIWSK
Trigger: CTTGGACCAGATCAACAGCACCTTCGTTCGATCCAACCCTAGCGTGCTACAGGGCTTGCTGCGTATCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GAGCAGGTTTGTCAGTGGGACAGAGTCAATCAGCCGTTGAATCCTTaGTGTGGAGGTGCTCTGGGCCATAATACTCAGGACTGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: EQVCQWDRVNQPLNP*CGGALGHNTQDCRG
Trigger: CCCCCTGCAGTCCTGAGTATTATGGCCCAGAGCACCTCCACACAAAGGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TTTTCTCATCTGCGTCATCGTCATCATCGTCGTCCTTGTCTCCCATaGGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTCACGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: FSHLRHRHHRRPCLP*ECCFEGRRATSRVS
Trigger: GGAGACACGTGACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAGATGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp GACAGGTATGGGATGATACGCAGCAAGCCCTGTAGCACGCTAGGGTaGGATCGAACGAAGGTGCTGTTGATCTGGTCCAAGAGCATCACC +
Preference number: 6 (lower is better)
Translates to: DRYGMIRSKPCSTLG*DRTKVLLIWSKSIT
Trigger: GGTGATGCTCTTGGACCAGATCAACAGCACCTTCGTTCGATCCAACCCTAGCGTGCTACAGGGCTTGCTGCGTATCATCCCATACCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CGTCAGGGTTCTCCAGACGCAGGAGGGAAAACTCAATaGGAACTTTACAGGCAGCTGCCACCGACTGAAGCT +
Preference number: 6 (lower is better)
Translates to: RQGSPDAGGKTQ*ELYRQLPPTEA
Trigger: AGCTTCAGTCGGTGGCAGCTGCCTGTAAAGTTCTCATTGAGTTTTCCCTCCTGCGTCTGGAGAACCCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CTTAATGATGCTGGCCAGAGTGGCCATGTGGTGCTCTaGGAGAGAGGCGCTCAGATAGCTCCGGATGAAACT +
Preference number: 6 (lower is better)
Translates to: LNDAGQSGHVVL*ERGAQIAPDET
Trigger: AGTTTCATCCGGAGCTATCTGAGCGCCTCTCTCTCAGAGCACCACATGGCCACTCTGGCCAGCATCATTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CAGCGTAGCTGGAAGGAGGTTCTTGGTGATCTCAGATaGCTTATGGGGGTCGGTCTCTGCGGCCATCTTAGA +
Preference number: 6 (lower is better)
Translates to: QRSWKEVLGDLR*LMGVGLCGHLR
Trigger: TCTAAGATGGCCGCAGAGACCGACCCCCATAAGTCATCTGAGATCACCAAGAACCTCCTTCCAGCTACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TCTCATCTGACCACACAATCAGATCCCCAGTCAACCTaGCCAGGGAGAGGAGGGTATGTTTCAGGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: SHLTTQSDPQST*PGRGGYVSGKP
Trigger: CGGCTTCCCTGAAACATACCCTCCTCTCCCTGGTCAGGTTGACTGGGGATCTGATTGTGTGGTCAGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp AAGTTCCCTGTGGCCAACTGGGGATGTAACACTAAGTaGTCGGAGACAGAGCCTGAGCTGCTGAAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: KFPVANWGCNTK*SETEPELLKVS
Trigger: GCTCACCTTCAGCAGCTCAGGCTCTGTCTCCGATCACTTAGTGTTACATCCCCAGTTGGCCACAGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CTGACTGTAGCTGAAGAAAAGCATCTGCAACACGTGTaGGTAGTACACAGACACGCCACCGCCTGCCACCTG +
Preference number: 6 (lower is better)
Translates to: LTVAEEKHLQHV*VVHRHATACHL
Trigger: CAGGTGGCAGGCGGTGGCGTGTCTGTGTACTACTCACACGTGTTGCAGATGCTTTTCTTCAGCTACAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp GGCGCTGGCAGGGAGAGCAACAAAGTGGCTAGCTCCTaGGCGGCATGCTTGTTTCTCTCCTTCTCAATGATT +
Preference number: 6 (lower is better)
Translates to: GAGRESNKVASS*AACLFLSFSMI
Trigger: AATCATTGAGAAGGAGAGAAACAAGCATGCCGCTCAGGAGCTAGCCACTTTGTTGCTCTCCCTGCCAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TTCCTGGCGGATGTGACCACCATCGGGGATGCCCGATaGCTGCATTTTCTCATCTGCGTCATCGTCATCATC +
Preference number: 6 (lower is better)
Translates to: FLADVTTIGDAR*LHFLICVIVII
Trigger: GATGATGACGATGACGCAGATGAGAAAATGCAGTCATCGGGCATCCCCGATGGTGGTCACATCCGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TCTTCCAGGCTTCGTATGATGCCTTGGGATCTCTCTTaGGCCACAGCTGAGCCTGGGCATGGATCTCATTGC +
Preference number: 6 (lower is better)
Translates to: SSRLRMMPWDLS*ATAEPGHGSHC
Trigger: GCAATGAGATCCATGCCCAGGCTCAGCTGTGGCTCAAGAGAGATCCCAAGGCATCATACGAAGCCTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp TCCATCTGCTTCAGGAGTGCAGTCTTGGTCACCACCTaGCCCTTTTCGTTTGTCGTCATGCCCAGAGTTCCC +
Preference number: 6 (lower is better)
Translates to: SICFRSAVLVTT*PFSFVVMPRVP
Trigger: GGGAACTCTGGGCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TTTGCGGCTGGCCAAGATGTTGCCCTTCTCACCAGATaGCTGCTTATTGGGGCTTTTAACCCGAGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: FAAGQDVALLTR*LLIGAFNPRRA
Trigger: AGCTCTCCTCGGGTTAAAAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp AAAGGAGCAACTCCCAGCTGCTGGAGCAGTGTATTCTaGAGGTTTGGGGACTGTAGGTCAGAAGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: KGATPSCWSSVF*RFGDCRSEVTS
Trigger: GCTGGTGACTTCTGACCTACAGTCCCCAAACCTGCAGAATACACTGCTCCAGCAGCTGGGAGTTGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TCTGTTTCCATCTGGGGCAGCTTTGACTCGGTGAAGTaGACAAGGTTGTTAGGGCGTGTGACGGCAATGGAG +
Preference number: 6 (lower is better)
Translates to: SVSIWGSFDSVK*TRLLGRVTAME
Trigger: CTCCATTGCCGTCACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp CGGACACCTCCGACATTCCGTAACTGGGGCAGTGTCTaGAGCAATCTTTCCAACAGCATCAGACGAACCATG +
Preference number: 6 (lower is better)
Translates to: RTPPTFRNWGSV*SNLSNSIRRTM
Trigger: CATGGTTCGTCTGATGCTGTTGGAAAGATTGCTGCAGACACTGCCCCAGTTACGGAATGTCGGAGGTGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp AGCTTCTTGATCCCACGCACATGGGAGTCCAGGGTGTaGAGGTCTCGGAGCTGTCGGTATTTCTCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: SFLIPRTWESRV*RSRSCRYFSFD
Trigger: ATCAAAGGAGAAATACCGACAGCTCCGAGACCTGCACACCCTGGACTCCCATGTGCGTGGGATCAAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GCTAGCCAGGTCAGGATTAGCCCAGTGGCCCTTCAGTaGAGTGGAGACTTTGCCAATGATCAGGTCGTTCAT +
Preference number: 6 (lower is better)
Translates to: ASQVRISPVALQ*SGDFANDQVVH
Trigger: ATGAACGACCTGATCATTGGCAAAGTCTCCACTGCACTGAAGGGCCACTGGGCTAATCCTGACCTGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp CTGGTTCATTGCTGCTATATGGGTTTCCGGGCATCCTaGCCTGTAGAAAGTCCTCTTGCTGGGGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LVHCCYMGFRAS*PVESPLAGGPS
Trigger: AGAAGGACCCCCAGCAAGAGGACTTTCTACAGGGCAGGATGCCCGGAAACCCATATAGCAGCAATGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp AAATCTTTGACTCCTGCCAGTCTGTTCAACATGCACTaGAGACCCCCACACTGGGCCATCACACCGGCCATT +
Preference number: 6 (lower is better)
Translates to: KSLTPASLFNMH*RPPHWAITPAI
Trigger: AATGGCCGGTGTGATGGCCCAGTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGGCAGGAGTCAAAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CTGCGGAGGGAGTTTCAAGTGGGGCCCCAATCAATATaGCAACTATCCCTAGATTCCAGCAGGCACATCTGG +
Preference number: 6 (lower is better)
Translates to: LRREFQVGPQSI*QLSLDSSRHIW
Trigger: CCAGATGTGCCTGCTGGAATCTAGGGATAGTTGGCATATTGATTGGGGCCCCACTTGAAACTCCCTCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129779.2
CDS CCA 72 bp CACACTTTCAGGCATTCAGGGACATCAGGGTCACCTTaGGCTCCAGCTTTATGCTGCCAGATAAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: HTFRHSGTSGSP*APALCCQISRR
Trigger: CCTCCTGCTTATCTGGCAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTCCCTGAATGCCTGAAAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GCTGGAAGGAGGTTCTTGGTGATCTCAGATGACTTATaGGGGTCGGTCTCTGCGGCCATCTTAGAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: AGRRFLVISDDL*GSVSAAILEKC
Trigger: GCACTTCTCTAAGATGGCCGCAGAGACCGACCCCCATAAGTCATCTGAGATCACCAAGAACCTCCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CTTCTCCAACTTGGCTGTTCTCCCGAACGATGTACGTaGTCAGTAACTGCAGCAGCTGCCGGTTCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: LLQLGCSPERCT*SVTAAAAGSPE
Trigger: TTCAGGAGAACCGGCAGCTGCTGCAGTTACTGACCACGTACATCGTTCGGGAGAACAGCCAAGTTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GGCTCTTTCCCCTCATCTGCTCCTTCTGTTTCCATCTaGGGCAGCTTTGACTCGGTGAAGTGCACAAGGTTG +
Preference number: 6 (lower is better)
Translates to: GSFPSSAPSVSI*GSFDSVKCTRL
Trigger: CAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGGAGCAGATGAGGGGAAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TCTTTGATGCAGAACTTCTGCCAGTTGATGGTTCGCTaGGCGGCAATCTCTGCACAGGCCTTCAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: SLMQNFCQLMVR*AAISAQAFRCS
Trigger: GGAGCATCTGAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp GTAAGCGGAGTTCCCAGCAGCTGTCCTCCTTGGAGATaGAATCTGTCAGCAGCAGCATCTCATACTGAAGGC +
Preference number: 6 (lower is better)
Translates to: VSGVPSSCPPWR*NLSAAASHTEG
Trigger: GCCTTCAGTATGAGATGCTGCTGCTGACAGATTCCATCTCCAAGGAGGACAGCTGCTGGGAACTCCGCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GTCATCTTCTTTGGAGCTTGTGGACCCTGTCCGCACTaGCTGGGCACTACCCACATGAAGGATGGCCATACA +
Preference number: 6 (lower is better)
Translates to: VIFFGACGPCPH*LGTTHMKDGHT
Trigger: TGTATGGCCATCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GAGAACAACTCAGGGTCTTTGCGGCTGGCCAAGATGTaGCCCTTCTCACCAGATGCCTGCTTATTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: ENNSGSLRLAKM*PFSPDACLLGL
Trigger: AAGCCCCAATAAGCAGGCATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp ATGTTGGAAGCCAGGCCTGAGAACAACTCAGGGTCTTaGCGGCTGGCCAAGATGTTGCCCTTCTCACCAGAT +
Preference number: 6 (lower is better)
Translates to: MLEARPENNSGS*RLAKMLPFSPD
Trigger: ATCTGGTGAGAAGGGCAACATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp AGAGCACTGCGCTCGTTCTTCTTGGAGACATCCTTTTaGTCCATGCCCAACTCGGCGATGAGCTGTGCAAGC +
Preference number: 6 (lower is better)
Translates to: RALRSFFLETSF*SMPNSAMSCAS
Trigger: GCTTGCACAGCTCATCGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp AGGACAGAGTCATCTTTGATGCAGAACTTCTGCCAGTaGATGGTTCGCTGGGCGGCAATCTCTGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: RTESSLMQNFCQ*MVRWAAISAQA
Trigger: GGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAAAGATGACTCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp AATGACTGCTCCATGGCGAAGCGCAGGAAGAGCAGTTaGATGTCATGGATGTTGAGCTGGTACGTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: NDCSMAKRRKSS*MSWMLSWYVGS
Trigger: GGAGCCCACGTACCAGCTCAACATCCATGACATCAAACTGCTCTTCCTGCGCTTCGCCATGGAGCAGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp ACTTTCGTAGTCATCTTCTTTGGAGCTTGTGGACCCTGTCCGCACTaGCTGGGCACTACCCACATGAAGGATGGCCATACACGTGGCTAC +
Preference number: 6 (lower is better)
Translates to: TFVVIFFGACGPCPH*LGTTHMKDGHTRGY
Trigger: GTAGCCACGTGTATGGCCATCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAGATGACTACGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp CTGTTTCGAGAGTTCAGCATGGAAGTCGTGATGAAGTTCAGGATGTaGGAAGCCAGGCCTGAGAACAACTCAGGGTCTTTGCGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LFREFSMEVVMKFRM*EARPENNSGSLRLA
Trigger: GGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAACATCCTGAACTTCATCACGACTTCCATGCTGAACTCTCGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp AAACCTGTCCCACACTTTCAGGCATTCAGGGACATCAGGGTCACCTaGGGCTCCAGCTTTATGCTGCCAGATAAGCAGGAGGCGAGAAAG +
Preference number: 6 (lower is better)
Translates to: KPVPHFQAFRDIRVT*GSSFMLPDKQEARK
Trigger: CTTTCTCGCCTCCTGCTTATCTGGCAGCATAAAGCTGGAGCCCAAGGTGACCCTGATGTCCCTGAATGCCTGAAAGTGTGGGACAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TTCTCTTCATCTGTAACCTTCCCATCACTGATGGTGACCTTGGCCTaGTCAGCAGGAGAGGTGCTGGCATGGCGCACCAGACTTTCGGAA +
Preference number: 6 (lower is better)
Translates to: FSSSVTFPSLMVTLA*SAGEVLAWRTRLSE
Trigger: TTCCGAAAGTCTGGTGCGCCATGCCAGCACCTCTCCTGCTGACAAGGCCAAGGTCACCATCAGTGATGGGAAGGTTACAGATGAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CTGCCGTCCTCGCACAGCAGGATCATGGTTGTACGTTGCTGCTCATaGCAGGCAGTGTGCCTAATGGCAACCATGTCTTGGATCTTTGCT +
Preference number: 6 (lower is better)
Translates to: LPSSHSRIMVVRCCS*QAVCLMATMSWIFA
Trigger: AGCAAAGATCCAAGACATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGAGGACGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp TGGAACACCTCGGGGTCCAAGTCCTTGCCTTCTTTGCTGGATGTGTaGAGACACTGCACAGCTTTGCTCAACAAGGCCTGGTCCTTATGG +
Preference number: 6 (lower is better)
Translates to: WNTSGSKSLPSLLDV*RHCTALLNKAWSLW
Trigger: CCATAAGGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTTGGACCCCGAGGTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp GATGACTGCATTTTCTCATCTGCGTCATCGTCATCATCGTCGTCCTaGTCTCCCATTGGAGTGTTGCTTCGAGGGGAGGAGGGCAACGTC +
Preference number: 6 (lower is better)
Translates to: DDCIFSSASSSSSSS*SPIGVLLRGEEGNV
Trigger: GACGTTGCCCTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAGATGAGAAAATGCAGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CTGCAGCAGCACGGGGGACACCCCCTCATCTACCAGGAAACTCACTaGCAGGAGGAAGTACAGGACAGAGTCATCTTTGATGCAGAACTT +
Preference number: 6 (lower is better)
Translates to: LQQHGGHPLIYQETH*QEEVQDRVIFDAEL
Trigger: AAGTTCTGCATCAAAGATGACTCTGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTAGATGAGGGGGTGTCCCCCGTGCTGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TCCCCACTATGGTCTTCATCGTACTTCTCGAAGCTGCAGTATGGCTaGAACCGCTCCACCAGGATCTGCATCTTCTCCACCTCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: SPLWSSSYFSKLQYG*NRSTRICIFSTSPK
Trigger: CTTCGGAGAGGTGGAGAAGATGCAGATCCTGGTGGAGCGGTTCAAGCCATACTGCAGCTTCGAGAAGTACGATGAAGACCATAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp AGTCGTGATGAAGTTCAGGATGTTGGAAGCCAGGCCTaGGAACAACTCAGGGTCTTTGCGGCTGGCCAAGAT +
Preference number: 6 (lower is better)
Translates to: SRDEVQDVGSQA*EQLRVFAAGQD
Trigger: ATCTTGGCCAGCCGCAAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAACATCCTGAACTTCATCACGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp ACGTTCTTCTTTTCCTTCCTCCTGGTTGTATCCAGCTaGGATCCAGCCGCGAGCAGGGTAGTCAGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: TFFFSFLLVVSS*DPAASRVVSEE
Trigger: TTCCTCACTGACTACCCTGCTCGCGGCTGGATCTCAGCTGGATACAACCAGGAGGAAGGAAAAGAAGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp ACTTCACTGAACTACACTTGCTGGCAGCCAGTTCTATaGGAGAGCCCGCATGCTCGGGCTTCATGCCTTGTT +
Preference number: 6 (lower is better)
Translates to: TSLNYTCWQPVL*ESPHARASCLV
Trigger: AACAAGGCATGAAGCCCGAGCATGCGGGCTCTCTCATAGAACTGGCTGCCAGCAAGTGTAGTTCAGTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TGGCGCACCAGACTTTCGGAAACCCTAGGTTCGCTCTaGAATGCTGACTCCTTCATGGTAGAGCTCATGCCA +
Preference number: 6 (lower is better)
Translates to: WRTRLSETLGSL*NADSFMVELMP
Trigger: TGGCATGAGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAACCTAGGGTTTCCGAAAGTCTGGTGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CTCATCTGCTCCTTCTGTTTCCATCTGGGGCAGCTTTaGCTCGGTGAAGTGCACAAGGTTGTTAGGGCGTGT +
Preference number: 6 (lower is better)
Translates to: LICSFCFHLGQL*LGEVHKVVRAC
Trigger: ACACGCCCTAACAACCTTGTGCACTTCACCGAGTCAAAGCTGCCCCAGATGGAAACAGAAGGAGCAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp AAGGTGCTGTTGATCTGGTCCAAGAGCATCACCAGTTaGTCCTTGTCACCTGTGAGGAGGAGGTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: KVLLIWSKSITS*SLSPVRRRLPL
Trigger: CAAGGGCAACCTCCTCCTCACAGGTGACAAGGATCAACTGGTGATGCTCTTGGACCAGATCAACAGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CTCGGGTCGTGTTCAGGACGTAAAGCACAGTGTGAATaGTGTATGGGATCAGGTGGATGTTGCTCTCACGGC +
Preference number: 6 (lower is better)
Translates to: LGSCSGRKAQCE*CMGSGGCCSHG
Trigger: GCCGTGAGAGCAACATCCACCTGATCCCATACATCATTCACACTGTGCTTTACGTCCTGAACACGACCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp AGGTGTTCTCTACATTGGCCATGTAAATCCGCAGGCTaGCGTCCTCGCACAGCAGGATCATGGTTGTACGTT +
Preference number: 6 (lower is better)
Translates to: RCSLHWPCKSAG*RPRTAGSWLYV
Trigger: AACGTACAACCATGATCCTGCTGTGCGAGGACGGCAGCCTGCGGATTTACATGGCCAATGTAGAGAACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp GATTCATCTAGAATGATCTCCATGATGCTTAGCACCTaGTCAGCCACAGCTGCTCCTCCGCTGTCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: DSSRMISMMLST*SATAAPPLSLL
Trigger: GAGCAAGGACAGCGGAGGAGCAGCTGTGGCTGAGCAGGTGCTAAGCATCATGGAGATCATTCTAGATGAATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CGGCTCCTCAATCAGCTCTTCCATCTGCTTCAGGAGTaGAGTCTTGGTCACCACCTGACCCTTTTCGTTTGT +
Preference number: 6 (lower is better)
Translates to: RLLNQLFHLLQE*SLGHHLTLFVC
Trigger: ACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGATTGAGGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GCTTCAAAGACATCAGCGGCATGGCCCTTCACATACTaGCGGAGAAAGAATGGGCTCATATCTGGCGGAGAT +
Preference number: 6 (lower is better)
Translates to: ASKTSAAWPFTY*RRKNGLISGGD
Trigger: ATCTCCGCCAGATATGAGCCCATTCTTTCTCCGCCAGTATGTGAAGGGCCATGCCGCTGATGTCTTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CAGAGGCACTGCAGCGAGGACATTGAAGGGTCTCTGTaGAGGCCTGGTAGTTCTCATAGAAGTCTGCAAACT +
Preference number: 6 (lower is better)
Translates to: QRHCSEDIEGSL*RPGSSHRSLQT
Trigger: AGTTTGCAGACTTCTATGAGAACTACCAGGCCTCCACAGAGACCCTTCAATGTCCTCGCTGCAGTGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CACATCGTAAGCGGAGTTCCCAGCAGCTGTCCTCCTTaGAGATGGAATCTGTCAGCAGCAGCATCTCATACT +
Preference number: 6 (lower is better)
Translates to: HIVSGVPSSCPP*RWNLSAAASHT
Trigger: AGTATGAGATGCTGCTGCTGACAGATTCCATCTCCAAGGAGGACAGCTGCTGGGAACTCCGCTTACGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GCAAAGTCCTCATCTGATGACCCCTTGAGTCCATCTTaGTCCACCTCCTTAATGATGCTGGCCAGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: AKSSSDDPLSPS*STSLMMLARVA
Trigger: GGCCACTCTGGCCAGCATCATTAAGGAGGTGGACAAAGATGGACTCAAGGGGTCATCAGATGAGGACTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GTGTCAATGAGCTGCAGCGTAGCTGGAAGGAGGTTCTaGGTGATCTCAGATGACTTATGGGGGTCGGTCTCT +
Preference number: 6 (lower is better)
Translates to: VSMSCSVAGRRF*VISDDLWGSVS
Trigger: AGAGACCGACCCCCATAAGTCATCTGAGATCACCAAGAACCTCCTTCCAGCTACGCTGCAGCTCATTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp TCGCACAGCAGGATCATGGTTGTACGTTGCTGCTCATaGCAGGCAGTGTGCCTAATGGCAACCATGTCTTGG +
Preference number: 6 (lower is better)
Translates to: SHSRIMVVRCCS*QAVCLMATMSW
Trigger: CCAAGACATGGTTGCCATTAGGCACACTGCCTGCAATGAGCAGCAACGTACAACCATGATCCTGCTGTGCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CACGGGGGACACCCCCTCATCTACCAGGAAACTCACTaGCAGGAGGAAGTACAGGACAGAGTCATCTTTGAT +
Preference number: 6 (lower is better)
Translates to: HGGHPLIYQETH*QEEVQDRVIFD
Trigger: ATCAAAGATGACTCTGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTAGATGAGGGGGTGTCCCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp GAACAATCGTGGCTGCATCACTTTCGTAGTCATCTTCTTTGGAGCTaGTGGACCCTGTCCGCACTTGCTGGGCACTACCCACATGAAGGA +
Preference number: 6 (lower is better)
Translates to: EQSWLHHFRSHLLWS*WTLSALAGHYPHEG
Trigger: TCCTTCATGTGGGTAGTGCCCAGCAAGTGCGGACAGGGTCCACAAGCTCCAAAGAAGATGACTACGAAAGTGATGCAGCCACGATTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GATGACGGTAAATTCTGCACTAGAGTTGGTCCCAGTGTGTTTGCCTaGCACCTACTGGAGCCGATAGCCAAGACAGCTGCAAAGCCATGC +
Preference number: 6 (lower is better)
Translates to: DDGKFCTRVGPSVFA*HLLEPIAKTAAKPC
Trigger: GCATGGCTTTGCAGCTGTCTTGGCTATCGGCTCCAGTAGGTGCAAGGCAAACACACTGGGACCAACTCTAGTGCAGAATTTACCGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp GACAGGAGGAGGAATCCGAGAGCTGGTGTCTGCGATCTTCTTGATTaGGTAGGGAAGCCTCAGTACCATCTCTGTGAGCAGCTGGGTATA +
Preference number: 6 (lower is better)
Translates to: DRRRNPRAGVCDLLD*VGKPQYHLCEQLGI
Trigger: TATACCCAGCTGCTCACAGAGATGGTACTGAGGCTTCCCTACCAAATCAAGAAGATCGCAGACACCAGCTCTCGGATTCCTCCTCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp AGGAAGTACAGGACAGAGTCATCTTTGATGCAGAACTTCTGCCAGTaGATGGTTCGCTGGGCGGCAATCTCTGCACAGGCCTTCAGATGC +
Preference number: 6 (lower is better)
Translates to: RKYRTESSLMQNFCQ*MVRWAAISAQAFRC
Trigger: GCATCTGAAGGCCTGTGCAGAGATTGCCGCCCAGCGAACCATCAACTGGCAGAAGTTCTGCATCAAAGATGACTCTGTCCTGTACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp AGCTTCAGCAGCACTGTTAGAAGGTGGCGTCCCTGCTTAAAATCTTaGACTCCTGCCAGTCTGTTCAACATGCACTGCAGACCCCCACAC +
Preference number: 6 (lower is better)
Translates to: SFSSTVRRWRPCLKS*TPASLFNMHCRPPH
Trigger: GTGTGGGGGTCTGCAGTGCATGTTGAACAGACTGGCAGGAGTCAAAGATTTTAAGCAGGGACGCCACCTTCTAACAGTGCTGCTGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TTGGGGACTGTAGGTCAGAAGTCACCAGCGAGTGGTTaGAGTGATAGAGAGCAGCAGCAAAGTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: LGTVGQKSPASG*SDREQQQSPHL
Trigger: CAGATGAGGACTTTGCTGCTGCTCTCTATCACTTCAACCACTCGCTGGTGACTTCTGACCTACAGTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp CAGACTTTCGGAAACCCTAGGTTCGCTCTGAAATGCTaGCTCCTTCATGGTAGAGCTCATGCCACTGCTAGG +
Preference number: 6 (lower is better)
Translates to: QTFGNPRFALKC*LLHGRAHATAR
Trigger: CCTAGCAGTGGCATGAGCTCTACCATGAAGGAGTCAGCATTTCAGAGCGAACCTAGGGTTTCCGAAAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp ATGTCTAACACGAGAGGAGCGAAGGAGAAATTGGCCTaGTTCTGCAGCTCCTCACGACACCCCTCAACTGTA +
Preference number: 6 (lower is better)
Translates to: MSNTRGAKEKLA*FCSSSRHPSTV
Trigger: TACAGTTGAGGGGTGTCGTGAGGAGCTGCAGAATCAGGCCAATTTCTCCTTCGCTCCTCTCGTGTTAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp ACGTTCAGGTCTTCTGTCTCACTGGGCACCACCCCCTaGAGTGCATTCTGCTTCATGGTAGTTAAAAACCTG +
Preference number: 6 (lower is better)
Translates to: TFRSSVSLGTTP*SAFCFMVVKNL
Trigger: CAGGTTTTTAACTACCATGAAGCAGAATGCACTGCAGGGGGTGGTGCCCAGTGAGACAGAAGACCTGAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TTACTGGAATCTGCTTGCTTCAGGAGCGCTGAGAGCTaGAGCACTGTGATCTTGCCCTTCTCATGGCTAACA +
Preference number: 6 (lower is better)
Translates to: LLESACFRSAES*STVILPFSWLT
Trigger: TGTTAGCCATGAGAAGGGCAAGATCACAGTGCTGCAGCTCTCAGCGCTCCTGAAGCAAGCAGATTCCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp ACCATTTCGAACAGCGGTGGCATCAGCTACTGTTGCTaGCATGATGAAGAAGGAATTGGCCACCACAGCATC +
Preference number: 6 (lower is better)
Translates to: TISNSGGISYCC*HDEEGIGHHSI
Trigger: GATGCTGTGGTGGCCAATTCCTTCTTCATCATGCCAGCAACAGTAGCTGATGCCACCGCTGTTCGAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp CTGAGCGGCATGCTTGTTTCTCTCCTTCTCAATGATTaGGCCAACAGCAAAGCAGCTTTCCAGGGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: LSGMLVSLLLND*ANSKAAFQGFQ
Trigger: TTGGAAGCCCTGGAAAGCTGCTTTGCTGTTGGCCCAATCATTGAGAAGGAGAGAAACAAGCATGCCGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp TGGATCAGAGTTTCTTTGTCTGCAAATCTGTTCAGCTaGTTCACGAGAGCTGTGCACAGCTGGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: WIRVSLSANLFS*FTRAVHSWSSW
Trigger: CCAGGAGGACCAGCTGTGCACAGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp TGGAAACGGCCTTCTTCCGATCTTCTTCGTTCTCGATaGGATCCACTGCACAGCAAGGCTTGGCATAAAGCA +
Preference number: 6 (lower is better)
Translates to: WKRPSSDLLRSR*DPLHSKAWHKA
Trigger: TGCTTTATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAGAACGAAGAAGATCGGAAGAAGGCCGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CAATCAGCTCTTCCATCTGCTTCAGGAGTGCAGTCTTaGTCACCACCTGACCCTTTTCGTTTGTCGTCATGC +
Preference number: 6 (lower is better)
Translates to: QSALPSASGVQS*SPPDPFRLSSC
Trigger: GCATGACGACAAACGAAAAGGGTCAGGTGGTGACCAAGACTGCACTCCTGAAGCAGATGGAAGAGCTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GAGCAGGTTTGTCAGTGGGACAGAGTCAATCAGCCGTaGAATCCTTTGTGTGGAGGTGCTCTGGGCCATAAT +
Preference number: 6 (lower is better)
Translates to: EQVCQWDRVNQP*NPLCGGALGHN
Trigger: ATTATGGCCCAGAGCACCTCCACACAAAGGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp AAATTCTGCACTAGAGTTGGTCCCAGTGTGTTTGCCTaGCACCTACTGGAGCCGATAGCCAAGACAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KFCTRVGPSVFA*HLLEPIAKTAA
Trigger: TGCAGCTGTCTTGGCTATCGGCTCCAGTAGGTGCAAGGCAAACACACTGGGACCAACTCTAGTGCAGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp AAGACTCGGTTACAGAATTTAGCAGAGAGGTCCTCATaGGCTGTGGCCATCATGATCTGCACCAGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: KTRLQNLAERSS*AVAIMICTSSP
Trigger: TGGGGAGCTGGTGCAGATCATGATGGCCACAGCCAATGAGGACCTCTCTGCTAAATTCTGTAACCGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp ATTTTCTCATCTGCGTCATCGTCATCATCGTCGTCCTaGTCTCCCATTGGAGTGTTGCTTCGAGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: IFSSASSSSSSS*SPIGVLLRGEE
Trigger: CTCCTCCCCTCGAAGCAACACTCCAATGGGAGACAAGGACGACGATGATGACGATGACGCAGATGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp AGGAATCCGAGAGCTGGTGTCTGCGATCTTCTTGATTaGGTAGGGAAGCCTCAGTACCATCTCTGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: RNPRAGVCDLLD*VGKPQYHLCEQ
Trigger: CTGCTCACAGAGATGGTACTGAGGCTTCCCTACCAAATCAAGAAGATCGCAGACACCAGCTCTCGGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TTTATGTCCCTCATAAGAGGCCCAATGCCTGGTTCATaGCTGCTATATGGGTTTCCGGGCATCCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: FMSLIRGPMPGS*LLYGFPGILPC
Trigger: ACAGGGCAGGATGCCCGGAAACCCATATAGCAGCAATGAACCAGGCATTGGGCCTCTTATGAGGGACATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp ACCTCAGCCACGGGAAGGTCCAGACTGATAATTTTATaGTTCACCAGGAGCTCCATCCCACTGTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: TSATGRSRLIIL*FTRSSIPLSSS
Trigger: GGAGGATGACAGTGGGATGGAGCTCCTGGTGAACAATAAAATTATCAGTCTGGACCTTCCCGTGGCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp ATCACGACCAAATGGACTTCATTCAGAGCACTGCGCTCGTTCTTCTaGGAGACATCCTTTTTGTCCATGCCCAACTCGGCGATGAGCTGT +
Preference number: 6 (lower is better)
Translates to: ITTKWTSFRALRSFF*ETSFLSMPNSAMSC
Trigger: ACAGCTCATCGCCGAGTTGGGCATGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAGTCCATTTGGTCGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CTGTCATCCTCCAGAAGAGCCACTAGGTCACAGTCCTGGCAGATCTaGTTCTTTATGTCCCTCATAAGAGGCCCAATGCCTGGTTCATTG +
Preference number: 6 (lower is better)
Translates to: LSSSRRATRSQSWQI*FFMSLIRGPMPGSL
Trigger: CAATGAACCAGGCATTGGGCCTCTTATGAGGGACATAAAGAACAAGATCTGCCAGGACTGTGACCTAGTGGCTCTTCTGGAGGATGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp AGAAGGAATTGGCCACCACAGCATCCTGAAACCGATTaGTGTAGCGCAGGAAATAGGGCAGGTTCAGGCATA +
Preference number: 6 (lower is better)
Translates to: RRNWPPQHPETD*CSAGNRAGSGI
Trigger: TATGCCTGAACCTGCCCTATTTCCTGCGCTACATCAATCGGTTTCAGGATGCTGTGGTGGCCAATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp AGCAGGTTTGTCAGTGGGACAGAGTCAATCAGCCGTTaGATCCTTTGTGTGGAGGTGCTCTGGGCCATAATA +
Preference number: 6 (lower is better)
Translates to: SRFVSGTESISR*ILCVEVLWAII
Trigger: TATTATGGCCCAGAGCACCTCCACACAAAGGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp GTGCACACACCCACCCCATCCACCATCTTACAGGTATaGCAGTGGTACCAATGCTGGTTCATAAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: VHTPTPSTILQV*QWYQCWFINSF
Trigger: GAAGGAGTTTATGAACCAGCATTGGTACCACTGTCATACCTGTAAGATGGTGGATGGGGTGGGTGTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp ACAAGGTGTTGTAGATGTTGGAGTTGGGGTGATTGGTaGGGATATGGTTCTGAGTCCTCAGGATCTCCACGG +
Preference number: 6 (lower is better)
Translates to: TRCCRCWSWGDW*GYGSESSGSPR
Trigger: CCGTGGAGATCCTGAGGACTCAGAACCATATCCTCACCAATCACCCCAACTCCAACATCTACAACACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp TGGGATCCACTGCACAGCAAGGCTTGGCATAAAGCATaGAGTCAAAGCGGGCGTATTTACAGAAGCCACAAG +
Preference number: 6 (lower is better)
Translates to: WDPLHSKAWHKA*SQSGRIYRSHK
Trigger: CTTGTGGCTTCTGTAAATACGCCCGCTTTGACTTCATGCTTTATGCCAAGCCTTGCTGTGCAGTGGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GACTCACAGACAGACTGCACTGATGACGGTAAATTCTaGACTAGAGTTGGTCCCAGTGTGTTTGCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: DSQTDCTDDGKF*TRVGPSVFALH
Trigger: GTGCAAGGCAAACACACTGGGACCAACTCTAGTGCAGAATTTACCGTCATCAGTGCAGTCTGTCTGTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GCTTCTCAACCACGTTCTTCTGTGACAGGTATTTCTTaGATCTGCCCAGCCAGTCCACTGCAGCATTGTGAA +
Preference number: 6 (lower is better)
Translates to: ASQPRSSVTGIS*ICPASPLQHCE
Trigger: TTCACAATGCTGCAGTGGACTGGCTGGGCAGATGCAAGAAATACCTGTCACAGAAGAACGTGGTTGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp AAGTCCTTGCCTTCTTTGCTGGATGTGTTGAGACACTaGACAGCTTTGCTCAACAAGGCCTGGTCCTTATGG +
Preference number: 6 (lower is better)
Translates to: KSLPSLLDVLRH*TALLNKAWSLW
Trigger: CCATAAGGACCAGGCCTTGTTGAGCAAAGCTGTGCAGTGTCTCAACACATCCAGCAAAGAAGGCAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CTGTCATCCTCCAGAAGAGCCACTAGGTCACAGTCCTaGCAGATCTTGTTCTTTATGTCCCTCATAAGAGGC +
Preference number: 6 (lower is better)
Translates to: LSSSRRATRSQS*QILFFMSLIRG
Trigger: GCCTCTTATGAGGGACATAAAGAACAAGATCTGCCAGGACTGTGACCTAGTGGCTCTTCTGGAGGATGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp GAGTTCAGCATGGAAGTCGTGATGAAGTTCAGGATGTaGGAAGCCAGGCCTGAGAACAACTCAGGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: EFSMEVVMKFRM*EARPENNSGSL
Trigger: CAAAGACCCTGAGTTGTTCTCAGGCCTGGCTTCCAACATCCTGAACTTCATCACGACTTCCATGCTGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp CTTTCCAACAGCATCAGACGAACCATGTGTAGCCTGTaGCTAGTGTGCACATCTCCTTCAGCTTCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LSNSIRRTMCSL*LVCTSPSASPS
Trigger: AGAAGGGGAAGCTGAAGGAGATGTGCACACTAGCAACAGGCTACACATGGTTCGTCTGATGCTGTTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CTCATCGAACGAGTTCTTACAGTCTCCACAATACTCTaGAGCCAGCTGCAGGATGTAGCGATTCACACTGGC +
Preference number: 6 (lower is better)
Translates to: LIERVLTVSTIL*SQLQDVAIHTG
Trigger: GCCAGTGTGAATCGCTACATCCTGCAGCTGGCTCAAGAGTATTGTGGAGACTGTAAGAACTCGTTCGATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp TCCAGAAGAGCCACTAGGTCACAGTCCTGGCAGATCTaGTTCTTTATGTCCCTCATAAGAGGCCCAATGCCT +
Preference number: 6 (lower is better)
Translates to: SRRATRSQSWQI*FFMSLIRGPMP
Trigger: AGGCATTGGGCCTCTTATGAGGGACATAAAGAACAAGATCTGCCAGGACTGTGACCTAGTGGCTCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp AAGAATTTCAAGACTCGGTTACAGAATTTAGCAGAGAGGTCCTCATaGGCTGTGGCCATCATGATCTGCACCAGCTCCCCACCATCAGAG +
Preference number: 6 (lower is better)
Translates to: KNFKTRLQNLAERSS*AVAIMICTSSPPSE
Trigger: CTCTGATGGTGGGGAGCTGGTGCAGATCATGATGGCCACAGCCAATGAGGACCTCTCTGCTAAATTCTGTAACCGAGTCTTGAAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp TTGGACTCCAACAGGAAACAGCGCAGAAACTGGATCAGAGTTTCTTaGTCTGCAAATCTGTTCAGCTGGTTCACGAGAGCTGTGCACAGC +
Preference number: 6 (lower is better)
Translates to: LDSNRKQRRNWIRVS*SANLFSWFTRAVHS
Trigger: GCTGTGCACAGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp ATCTTGTTCTTTATGTCCCTCATAAGAGGCCCAATGCCTGGTTCATaGCTGCTATATGGGTTTCCGGGCATCCTGCCCTGTAGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: ILFFMSLIRGPMPGS*LLYGFPGILPCRKS
Trigger: GGACTTTCTACAGGGCAGGATGCCCGGAAACCCATATAGCAGCAATGAACCAGGCATTGGGCCTCTTATGAGGGACATAAAGAACAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp AAGGGTATCCAAGGCCATGGTTACATCAATCACCAGTaGGTGAAAACCATTTCGAACAGCGGTGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: KGIQGHGYINHQ*VKTISNSGGIS
Trigger: GCTGATGCCACCGCTGTTCGAAATGGTTTTCACTCACTGGTGATTGATGTAACCATGGCCTTGGATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp GATCTGCATGGTTGGCCAGAATGTTGTAACATCCCGTaGTCAGCTTCTCATACACACGAGCCAGGAACTCAT +
Preference number: 6 (lower is better)
Translates to: DLHGWPECCNIP*SASHTHEPGTH
Trigger: ATGAGTTCCTGGCTCGTGTGTATGAGAAGCTGATCACGGGATGTTACAACATTCTGGCCAACCATGCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp ACAGCAGCATCTGCATGTAGATCTTGGATGCTGTGTTaGTACAGTCCAGCTCGCAGGTACAATAACCGTGGA +
Preference number: 6 (lower is better)
Translates to: TAASACRSWMLC*YSPARRYNNRG
Trigger: TCCACGGTTATTGTACCTGCGAGCTGGACTGTATCAACACAGCATCCAAGATCTACATGCAGATGCTGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CTCGGAGCTGTCGGTATTTCTCCTTTGATCCACAGATaGAGAGCAGAAGTTTTCGAACTTGTCGGCGGACAA +
Preference number: 6 (lower is better)
Translates to: LGAVGISPLIHR*RAEVFELVGGQ
Trigger: TTGTCCGCCGACAAGTTCGAAAACTTCTGCTCTTCATCTGTGGATCAAAGGAGAAATACCGACAGCTCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp GGTGTGCAGGTCTCGGAGCTGTCGGTATTTCTCCTTTaGTCCACAGATGAAGAGCAGAAGTTTTCGAACTTG +
Preference number: 6 (lower is better)
Translates to: GVQVSELSVFLL*STDEEQKFSNL
Trigger: CAAGTTCGAAAACTTCTGCTCTTCATCTGTGGATCAAAGGAGAAATACCGACAGCTCCGAGACCTGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS TCA 72 bp AGTTCAACAGGTCCTTTAGGAAGCTCTCTGGATCGGTaGTTTCTGATAGAAGACCTGCTGCGTCGAGGAACT +
Preference number: 6 (lower is better)
Translates to: SSTGPLGSSLDR*FLIEDLLRRGT
Trigger: AGTTCCTCGACGCAGCAGGTCTTCTATCAGAAATCACCGATCCAGAGAGCTTCCTAAAGGACCTGTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp CATGCCAGTGGAGTTCAGCCTGTGCTTTATCTGCTGTaGATTGTAGACTTGCAAGAGGTCATTACCGCCAAA +
Preference number: 6 (lower is better)
Translates to: HASGVQPVLYLL*IVDLQEVITAK
Trigger: TTTGGCGGTAATGACCTCTTGCAAGTCTACAATGCACAGCAGATAAAGCACAGGCTGAACTCCACTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp GTTCCAGCACAGGCAGGGAAAGGGTATCCAAGGCCATaGTTACATCAATCACCAGTGAGTGAAAACCATTTC +
Preference number: 6 (lower is better)
Translates to: VPAQAGKGYPRP*LHQSPVSENHF
Trigger: GAAATGGTTTTCACTCACTGGTGATTGATGTAACCATGGCCTTGGATACCCTTTCCCTGCCTGTGCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GACATGAAGACACTCAGGAGTCTCATCACGACCAAATaGACTTCATTCAGAGCACTGCGCTCGTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: DMKTLRSLITTK*TSFRALRSFFL
Trigger: CAAGAAGAACGAGCGCAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAGACTCCTGAGTGTCTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CCA 72 bp CTTGTTCTTTATGTCCCTCATAAGAGGCCCAATGCCTaGTTCATTGCTGCTATATGGGTTTCCGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: LVLYVPHKRPNA*FIAAIWVSGHP
Trigger: AGGATGCCCGGAAACCCATATAGCAGCAATGAACCAGGCATTGGGCCTCTTATGAGGGACATAAAGAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp TCTGCCGCTGCAGGACACACGCCTTTCTGTATGAAGTaGAAAGTAAAGTCAAGAGCAGGTTTGTCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: SAAAGHTPFCMK*KVKSRAGLSVG
Trigger: TCCCACTGACAAACCTGCTCTTGACTTTACTTTCAACTTCATACAGAAAGGCGTGTGTCCTGCAGCGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp CTGGAGATGAGGGAAGAGGACTCACAGATGGAAGATTaGGATCCAGACTTGGTACGAGACATGAAGACACTC +
Preference number: 6 (lower is better)
Translates to: LEMREEDSQMED*DPDLVRDMKTL
Trigger: GAGTGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATCTTCCATCTGTGAGTCCTCTTCCCTCATCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp CCGGCAGCAATTTTGCAGAAGCAATCCAGGAAGACTTaGTCATCCCCACTATGGTCTTCATCGTACTTCTCG +
Preference number: 6 (lower is better)
Translates to: PAAILQKQSRKT*SSPLWSSSYFS
Trigger: CGAGAAGTACGATGAAGACCATAGTGGGGATGACAAAGTCTTCCTGGATTGCTTCTGCAAAATTGCTGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TACCCAGCAGAGGACATGATGACAATGATGTTCTTGCCTTCCTCGTaGAAAAGGAAGGTAACGTCTCTTATCTTTGAGCTCGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: YPAEDMMTMMFLPSS*KRKVTSLIFELGRR
Trigger: CCTCCTGCCGAGCTCAAAGATAAGAGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAACATCATTGTCATCATGTCCTCTGCTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp GAGATGAGGGAAGAGGACTCACAGATGGAAGATTTGGATCCAGACTaGGTACGAGACATGAAGACACTCAGGAGTCTCATCACGACCAAA +
Preference number: 6 (lower is better)
Translates to: EMREEDSQMEDLDPD*VRDMKTLRSLITTK
Trigger: TTTGGTCGTGATGAGACTCCTGAGTGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATCTTCCATCTGTGAGTCCTCTTCCCTCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp GCAAATGCATTGCGCCAGGATCCAATGTTGGGAAACTCATTGGTATaGATGTTATTCCAGGACTCACAGACAGACTGCACTGATGACGGT +
Preference number: 6 (lower is better)
Translates to: ANALRQDPMLGNSLV*MLFQDSQTDCTDDG
Trigger: ACCGTCATCAGTGCAGTCTGTCTGTGAGTCCTGGAATAACATCAATACCAATGAGTTTCCCAACATTGGATCCTGGCGCAATGCATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp ATCCGCAGACACATGAGTGTGATATTCTCAACAACCACTGGCGTTTaGATGTTCACAGCCATGAGGAAAAGGCTGAGTGCACATCGTAAG +
Preference number: 6 (lower is better)
Translates to: IRRHMSVIFSTTTGV*MFTAMRKRLSAHRK
Trigger: CTTACGATGTGCACTCAGCCTTTTCCTCATGGCTGTGAACATCAAAACGCCAGTGGTTGTTGAGAATATCACACTCATGTGTCTGCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TTCTTGATACCGGCAGCAATTTTGCAGAAGCAATCCAGGAAGACTTaGTCATCCCCACTATGGTCTTCATCGTACTTCTCGAAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: FLIPAAILQKQSRKT*SSPLWSSSYFSKLQ
Trigger: CTGCAGCTTCGAGAAGTACGATGAAGACCATAGTGGGGATGACAAAGTCTTCCTGGATTGCTTCTGCAAAATTGCTGCCGGTATCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp GTATCCAAGGCCATGGTTACATCAATCACCAGTGAGTaGAAACCATTTCGAACAGCGGTGGCATCAGCTACT +
Preference number: 6 (lower is better)
Translates to: VSKAMVTSITSE*KPFRTAVASAT
Trigger: AGTAGCTGATGCCACCGCTGTTCGAAATGGTTTTCACTCACTGGTGATTGATGTAACCATGGCCTTGGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp GTCTCATCACGACCAAATGGACTTCATTCAGAGCACTaGGCTCGTTCTTCTTGGAGACATCCTTTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: VSSRPNGLHSEH*ARSSWRHPFCP
Trigger: TGGACAAAAAGGATGTCTCCAAGAAGAACGAGCGCAGTGCTCTGAATGAAGTCCATTTGGTCGTGATGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS GCA 72 bp GAAACAGCGCAGAAACTGGATCAGAGTTTCTTTGTCTaGAAATCTGTTCAGCTGGTTCACGAGAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: ETAQKLDQSFFV*KSVQLVHESCA
Trigger: TGCACAGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp CTTCTTCCGATCTTCTTCGTTCTCGATGGGATCCACTaGACAGCAAGGCTTGGCATAAAGCATGAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: LLPIFFVLDGIH*TARLGIKHEVK
Trigger: TTTGACTTCATGCTTTATGCCAAGCCTTGCTGTGCAGTGGATCCCATCGAGAACGAAGAAGATCGGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp TGTGCTGCACCTGCTCAAACAGATACACGGGGGCTTTaGAGTACTGATGAAGTAGGTAGTCAAAGATCAAGA +
Preference number: 6 (lower is better)
Translates to: CAAPAQTDTRGL*STDEVGSQRSR
Trigger: TCTTGATCTTTGACTACCTACTTCATCAGTACTCCAAAGCCCCCGTGTATCTGTTTGAGCAGGTGCAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CCA 72 bp GACGAGTTGGACTCCAACAGGAAACAGCGCAGAAACTaGATCAGAGTTTCTTTGTCTGCAAATCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: DELDSNRKQRRN*IRVSLSANLFS
Trigger: GCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTTGGAGTCCAACTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp CCGCAGACACATGAGTGTGATATTCTCAACAACCACTaGCGTTTTGATGTTCACAGCCATGAGGAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PQTHECDILNNH*RFDVHSHEEKA
Trigger: AGCCTTTTCCTCATGGCTGTGAACATCAAAACGCCAGTGGTTGTTGAGAATATCACACTCATGTGTCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp TCCACGTCTGAAAGCGTCTTCACTGTCTGTGGAAGCTaGGCGGACTTCATCATTGCTGTAAAGGTGATAATC +
Preference number: 6 (lower is better)
Translates to: STSESVFTVCGS*ADFIIAVKVII
Trigger: GATTATCACCTTTACAGCAATGATGAAGTCCGCCAAGCTTCCACAGACAGTGAAGACGCTTTCAGACGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GTTCAGCCTGTGCTTTATCTGCTGTGCATTGTAGACTaGCAAGAGGTCATTACCGCCAAACTCCACATCTGT +
Preference number: 6 (lower is better)
Translates to: VQPVLYLLCIVD*QEVITAKLHIC
Trigger: ACAGATGTGGAGTTTGGCGGTAATGACCTCTTGCAAGTCTACAATGCACAGCAGATAAAGCACAGGCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 90 bp CACACGCCTTTCTGTATGAAGTTGAAAGTAAAGTCAAGAGCAGGTTaGTCAGTGGGACAGAGTCAATCAGCCGTTGAATCCTTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: HTPFCMKLKVKSRAG*SVGQSQSAVESFVW
Trigger: CCACACAAAGGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCTCTTGACTTTACTTTCAACTTCATACAGAAAGGCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TCGTTGGCAAATGCATTGCGCCAGGATCCAATGTTGGGAAACTCATaGGTATTGATGTTATTCCAGGACTCACAGACAGACTGCACTGAT +
Preference number: 6 (lower is better)
Translates to: SLANALRQDPMLGNS*VLMLFQDSQTDCTD
Trigger: ATCAGTGCAGTCTGTCTGTGAGTCCTGGAATAACATCAATACCAATGAGTTTCCCAACATTGGATCCTGGCGCAATGCATTTGCCAACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS TCA 72 bp TTCCTCGTTGAAAAGGAAGGTAACGTCTCTTATCTTTaGGCTCGGCAGGAGGAAGTAGAAGGTTGGACTCAA +
Preference number: 6 (lower is better)
Translates to: FLVEKEGNVSYL*ARQEEVEGWTQ
Trigger: TTGAGTCCAACCTTCTACTTCCTCCTGCCGAGCTCAAAGATAAGAGACGTTACCTTCCTTTTCAACGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp TTAGATGCATGGAGTTTCCAGAAGTGGTTTACAAGCTaGGTGATGAAACTACAGCCGTCTCCTTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LDAWSFQKWFTS*VMKLQPSPSCF
Trigger: GAAGCAGGAAGGAGACGGCTGTAGTTTCATCACTCAGCTTGTAAACCACTTCTGGAAACTCCATGCATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097822.10
ENSMUST00000129779.2
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp AGATGGAAGATTTGGATCCAGACTTGGTACGAGACATaGAGACACTCAGGAGTCTCATCACGACCAAATGGA +
Preference number: 6 (lower is better)
Translates to: RWKIWIQTWYET*RHSGVSSRPNG
Trigger: TCCATTTGGTCGTGATGAGACTCCTGAGTGTCTTCATGTCTCGTACCAAGTCTGGATCCAAATCTTCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp TTGCGCCAGGATCCAATGTTGGGAAACTCATTGGTATaGATGTTATTCCAGGACTCACAGACAGACTGCACT +
Preference number: 6 (lower is better)
Translates to: LRQDPMLGNSLV*MLFQDSQTDCT
Trigger: AGTGCAGTCTGTCTGTGAGTCCTGGAATAACATCAATACCAATGAGTTTCCCAACATTGGATCCTGGCGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GTGTCGTTGGCAAATGCATTGCGCCAGGATCCAATGTaGGGAAACTCATTGGTATTGATGTTATTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: VSLANALRQDPM*GNSLVLMLFQD
Trigger: GTCCTGGAATAACATCAATACCAATGAGTTTCCCAACATTGGATCCTGGCGCAATGCATTTGCCAACGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp AACTCCTTCTGTGTGATGGTGAAGGTACACAGCTTATaGCAAAGAGAATCTTCATCAGAGTCCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: NSFCVMVKVHSL*QRESSSESSAW
Trigger: CCAGGCTGAGGACTCTGATGAAGATTCTCTTTGCAATAAGCTGTGTACCTTCACCATCACACAGAAGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp AACAGGAAACAGCGCAGAAACTGGATCAGAGTTTCTTaGTCTGCAAATCTGTTCAGCTGGTTCACGAGAGCT +
Preference number: 6 (lower is better)
Translates to: NRKQRRNWIRVS*SANLFSWFTRA
Trigger: AGCTCTCGTGAACCAGCTGAACAGATTTGCAGACAAAGAAACTCTGATCCAGTTTCTGCGCTGTTTCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 72 bp CACATGAGTGTGATATTCTCAACAACCACTGGCGTTTaGATGTTCACAGCCATGAGGAAAAGGCTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: HMSVIFSTTTGV*MFTAMRKRLSA
Trigger: TGCACTCAGCCTTTTCCTCATGGCTGTGAACATCAAAACGCCAGTGGTTGTTGAGAATATCACACTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CCA 72 bp GTAAGATGTCACATTCACTCATCTCAGGTGAATTCATaGCCAGCTGGTTCATGTAAGTCTTTGAAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: VRCHIHSSQVNS*PAGSCKSLKVA
Trigger: TGCCACCTTCAAAGACTTACATGAACCAGCTGGCCATGAATTCACCTGAGATGAGTGAATGTGACATCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp CACTCATCTCAGGTGAATTCATGGCCAGCTGGTTCATGTAAGTCTTaGAAGGTGGCAAAATTCCTAAGATCCTCCAGAGAATCAAGAAGT +
Preference number: 6 (lower is better)
Translates to: HSSQVNSWPAGSCKS*KVAKFLRSSRESRS
Trigger: ACTTCTTGATTCTCTGGAGGATCTTAGGAATTTTGCCACCTTCAAAGACTTACATGAACCAGCTGGCCATGAATTCACCTGAGATGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 90 bp TGTGTGTACATGTACCCAGCAGAGGACATGATGACAATGATGTTCTaGCCTTCCTCGTTGAAAAGGAAGGTAACGTCTCTTATCTTTGAG +
Preference number: 6 (lower is better)
Translates to: CVYMYPAEDMMTMMF*PSSLKRKVTSLIFE
Trigger: CTCAAAGATAAGAGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAACATCATTGTCATCATGTCCTCTGCTGGGTACATGTACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS TCA 72 bp CCAACAGCTCTTTGCGTGAAGCAAAAACTTTCTGGATaGTTTTGGAGAGCTCATCGAACGAGTTCTTACAGT +
Preference number: 6 (lower is better)
Translates to: PTALCVKQKLSG*FWRAHRTSSYS
Trigger: ACTGTAAGAACTCGTTCGATGAGCTCTCCAAAATCATCCAGAAAGTTTTTGCTTCACGCAAAGAGCTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS GCA 72 bp GTCGTAGATCTCAAGACATTTCTGAACAATCGTGGCTaGATCACTTTCGTAGTCATCTTCTTTGGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: VVDLKTFLNNRG*ITFVVIFFGAC
Trigger: ACAAGCTCCAAAGAAGATGACTACGAAAGTGATGCAGCCACGATTGTTCAGAAATGTCTTGAGATCTACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS GCA 72 bp TTGGTATTGATGTTATTCCAGGACTCACAGACAGACTaGACTGATGACGGTAAATTCTGCACTAGAGTTGGT +
Preference number: 6 (lower is better)
Translates to: LVLMLFQDSQTD*TDDGKFCTRVG
Trigger: ACCAACTCTAGTGCAGAATTTACCGTCATCAGTGCAGTCTGTCTGTGAGTCCTGGAATAACATCAATACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp TTCTGTATGAAGTTGAAAGTAAAGTCAAGAGCAGGTTaGTCAGTGGGACAGAGTCAATCAGCCGTTGAATCC +
Preference number: 6 (lower is better)
Translates to: FCMKLKVKSRAG*SVGQSQSAVES
Trigger: GGATTCAACGGCTGATTGACTCTGTCCCACTGACAAACCTGCTCTTGACTTTACTTTCAACTTCATACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097822.10
ENSMUST00000165860.8
CDS CAA 72 bp GAGGACATGATGACAATGATGTTCTTGCCTTCCTCGTaGAAAAGGAAGGTAACGTCTCTTATCTTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: EDMMTMMFLPSS*KRKVTSLIFEL
Trigger: GAGCTCAAAGATAAGAGACGTTACCTTCCTTTTCAACGAGGAAGGCAAGAACATCATTGTCATCATGTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000129949.8
ENSMUST00000165860.8
CDS CAA 72 bp AGCTCTTTGCGTGAAGCAAAAACTTTCTGGATGATTTaGGAGAGCTCATCGAACGAGTTCTTACAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SSLREAKTFWMI*ESSSNEFLQSP
Trigger: TGGAGACTGTAAGAACTCGTTCGATGAGCTCTCCAAAATCATCCAGAAAGTTTTTGCTTCACGCAAAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8
CDS CAA 90 bp TATTCCAACAGCTCTTTGCGTGAAGCAAAAACTTTCTGGATGATTTaGGAGAGCTCATCGAACGAGTTCTTACAGTCTCCACAATACTCT +
Preference number: 6 (lower is better)
Translates to: YSNSSLREAKTFWMI*ESSSNEFLQSPQYS
Trigger: AGAGTATTGTGGAGACTGTAAGAACTCGTTCGATGAGCTCTCCAAAATCATCCAGAAAGTTTTTGCTTCACGCAAAGAGCTGTTGGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097822.10
ENSMUST00000147999.8
ENSMUST00000165860.8