RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023977

Ensembl transcript IDs: ENSMUST00000113335.4, ENSMUST00000113337.10, ENSMUST00000225599.2

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGGGCAGGGCAGGGCAGGGCAGGGCAGGCAGCTCAAAACACTaGCTTCTGGATTTCGTTTGGTTTGAGACAGGGTCTCCTCAAGTT +
Preference number: 1 (lower is better)
Translates to: GQGRAGQGRAGSSKH*LLDFVWFETGSPQV
Trigger: AACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCCCTGCCCTGCCCTGCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 90 bp GGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCTGGTaGACAGCCAGCAAGCTTGACACCATCAGCAATGTTGACTGGCTC +
Preference number: 1 (lower is better)
Translates to: GHVLLTGPRAPFGLW*TASKLDTISNVDWL
Trigger: GAGCCAGTCAACATTGCTGATGGTGTCAAGCTTGCTGGCTGTCCACCAGAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 90 bp GTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCTaGTGGACAGCCAGCAAGCTTGACACCATCAGCAATGTTGACTGG +
Preference number: 1 (lower is better)
Translates to: VGHVLLTGPRAPFGL*WTASKLDTISNVDW
Trigger: CCAGTCAACATTGCTGATGGTGTCAAGCTTGCTGGCTGTCCACCAGAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 90 bp GCAGGGCAGGGCAGGGCAGGGCAGGCAGCTCAAAACACTGCCTTCTaGATTTCGTTTGGTTTGAGACAGGGTCTCCTCAAGTTACCCACG +
Preference number: 1 (lower is better)
Translates to: AGQGRAGQAAQNTAF*ISFGLRQGLLKLPT
Trigger: CGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCCCTGCCCTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 90 bp CTTCCTGGAGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATaGACTCTGACCAGGCAGACCCGTGATGCTCTACAGCCCACTGCA +
Preference number: 1 (lower is better)
Translates to: LPGEPSRSNAAPSVA*TLTRQTRDALQPTA
Trigger: TGCAGTGGGCTGTAGAGCATCACGGGTCTGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCTCCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 90 bp TGCACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTaGAGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATGGAC +
Preference number: 1 (lower is better)
Translates to: CTCPSTAFSKWCFSS*RAIPIKCSTLCSMD
Trigger: GTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp CGGCATGTGCCAAAGGTCGAAAGCATCACCATCCACAGCCCAGTCTaGCTATGCCAAGGGAAGGCGAGACAAAGGGAGAGCACGGAGTCT +
Preference number: 1 (lower is better)
Translates to: RHVPKVESITIHSPV*LCQGKARQRESTES
Trigger: AGACTCCGTGCTCTCCCTTTGTCTCGCCTTCCCTTGGCATAGTCAGACTGGGCTGTGGATGGTGATGCTTTCGACCTTTGGCACATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR GCA 90 bp ATGACATTGCCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTaGCCAGACCCTGATGTTCCCAGGAGTGAAACACAGGGCCACCTC +
Preference number: 1 (lower is better)
Translates to: MTLPQCEDCHSLGSH*PDPDVPRSETQGHL
Trigger: GAGGTGGCCCTGTGTTTCACTCCTGGGAACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGGCAATGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR GCA 90 bp AACCACCTGATCATGTCCTTGTGGGCTTCCAGGGAGGGGGCGTTCTaGAAGGTCTCCAGCATAGCTAGGATGCTCGGGGAGTTATGTGGT +
Preference number: 1 (lower is better)
Translates to: NHLIMSLWASREGAF*KVSSIARMLGELCG
Trigger: ACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 90 bp CAGGGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTaGTTTGAGACAGGGTCTCCTCAAGTTACCCACGCTGGCCGCAAG +
Preference number: 1 (lower is better)
Translates to: QGRAGSSKHCLLDFV*FETGSPQVTHAGRK
Trigger: CTTGCGGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 90 bp AAATGCAGCACCCTCTGTAGCATGGACTCTGACCAGGCAGACCCGTaGTGCTCTACAGCCCACTGCAGGATCGTTCCCATGATGTACAGC +
Preference number: 1 (lower is better)
Translates to: KCSTLCSMDSDQADP*CSTAHCRIVPMMYS
Trigger: GCTGTACATCATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCACGGGTCTGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp AGCTTGACACCATCAGCAATGTTGACTGGCTCAGGCTACTGCAGCTaGAGCAGGCAGCGTCCAAAGGAGCTAGACTCCGGTCTAGAAAGG +
Preference number: 1 (lower is better)
Translates to: SLTPSAMLTGSGYCS*SRQRPKELDSGLER
Trigger: CCTTTCTAGACCGGAGTCTAGCTCCTTTGGACGCTGCCTGCTTCAGCTGCAGTAGCCTGAGCCAGTCAACATTGCTGATGGTGTCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 90 bp AGCACTGTACTCAGCCGAGCTCTTACTTGTCTGCTGTGGTCTGCTTaGGGGTGCGCACATGCTCTCTGTTTAGCCTTGGAGCAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: STVLSRALTCLLWSA*GCAHALCLALEQKA
Trigger: AGCCTTCTGCTCCAAGGCTAAACAGAGAGCATGTGCGCACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTCGGCTGAGTACAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 90 bp CATGCGGAACAAGTGGAAGTAAGACGTGTCGGTAGGGGGAGGACATaGCATTGCCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACT +
Preference number: 1 (lower is better)
Translates to: HAEQVEVRRVGRGRT*HCHSVRTAIPWEVT
Trigger: AGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGGCAATGTCATGTCCTCCCCCTACCGACACGTCTTACTTCCACTTGTTCCGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 90 bp CTTCCCACTCTGGCTCCATCTCAATGTGCTGTCCCACCTGACGCGTaGTCGGGTCCATTCCCTGCATGCACTTCAGTAATTCCAAGAAGG +
Preference number: 1 (lower is better)
Translates to: LPTLAPSQCAVPPDA*SGPFPACTSVIPRR
Trigger: CCTTCTTGGAATTACTGAAGTGCATGCAGGGAATGGACCCGATCACGCGTCAGGTGGGACAGCACATTGAGATGGAGCCAGAGTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp GCACACCAGTCCTGCACCATTGAGATGACGTGTGTCAGCTTCATCTaGAGTGTGAAGGCTGCTTCCCACTCTGGCTCCATCTCAATGTGC +
Preference number: 1 (lower is better)
Translates to: AHQSCTIEMTCVSFI*SVKAASHSGSISMC
Trigger: GCACATTGAGATGGAGCCAGAGTGGGAAGCAGCCTTCACACTGCAGATGAAGCTGACACACGTCATCTCAATGGTGCAGGACTGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp GCCCACTGCAGGATCGTTCCCATGATGTACAGCATGACGTCACACTaGAAGATGTTAACCAGACTCGCGAACAAAGGGCAGAACGGTGGC +
Preference number: 1 (lower is better)
Translates to: AHCRIVPMMYSMTSH*KMLTRLANKGQNGG
Trigger: GCCACCGTTCTGCCCTTTGTTCGCGAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCTGTACATCATGGGAACGATCCTGCAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp GGCTTGGTCTGTCTGCTGGTGTTCCTCACAATGACTGTCTTTGCTTaGTCACAGTACTGGAAATCTCCATATCGGACAGACCTACGGCCA +
Preference number: 1 (lower is better)
Translates to: GLVCLLVFLTMTVFA*SQYWKSPYRTDLRP
Trigger: TGGCCGTAGGTCTGTCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp CTGCCTTGGACTGCTCTGCCCTGGAGAAATGATAAAAATACAGGTTaGACTCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCC +
Preference number: 1 (lower is better)
Translates to: LPWTALPWRNDKNTG*TLWHTLASAHTCLA
Trigger: GGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp GAGCGGCTTGGTCTGTCTGCTGGTGTTCCTCACAATGACTGTCTTTaGTTGATCACAGTACTGGAAATCTCCATATCGGACAGACCTACG +
Preference number: 1 (lower is better)
Translates to: ERLGLSAGVPHNDCL*LITVLEISISDRPT
Trigger: CGTAGGTCTGTCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAGCCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp GTAATGCTTTCAAAGCTAAAAGTCTTGACCAACCATCTACAGCCATaGAAAGCCGGCTGCTCTCCTGTTAGAGTCCCCAGCTCTCTAGGC +
Preference number: 1 (lower is better)
Translates to: VMLSKLKVLTNHLQP*KAGCSPVRVPSSLG
Trigger: GCCTAGAGAGCTGGGGACTCTAACAGGAGAGCAGCCGGCTTTTCATGGCTGTAGATGGTTGGTCAAGACTTTTAGCTTTGAAAGCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 90 bp TCTTCTGTGAGGAGCATTCGCGCAAGTGAAGGAACTGTGAATATCTaGACCGAGAGGTCTGCGACTGAAAACTCTCTGTCGTGGTCATCT +
Preference number: 1 (lower is better)
Translates to: SSVRSIRASEGTVNI*TERSATENSLSWSS
Trigger: AGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCCTTCACTTGCGCGAATGCTCCTCACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 90 bp TTAATTGCATTAAACATCTTTAGCAACCACCTGATCATGTCCTTGTaGGCTTCCAGGGAGGGGGCGTTCTGCAAGGTCTCCAGCATAGCT +
Preference number: 1 (lower is better)
Translates to: LIALNIFSNHLIMSL*ASREGAFCKVSSIA
Trigger: AGCTATGCTGGAGACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGATGTTTAATGCAATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp GACACGGAGGCATGGATAGAGCTGAGTGGATGTGATTTGAAAGGCTaGGTGAGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTT +
Preference number: 1 (lower is better)
Translates to: DTEAWIELSGCDLKG*VRGSLMVREAESPF
Trigger: AAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCTCACTCAGCCTTTCAAATCACATCCACTCAGCTCTATCCATGCCTCCGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 90 bp GTATCTGATGGTTTCCACCGAGTGTCCACAAATACTGAGTGTGATTaGCTGTTCACCATCAGTAAATCCGCCATGACACTGTGTCAGCAC +
Preference number: 1 (lower is better)
Translates to: VSDGFHRVSTNTECD*LFTISKSAMTLCQH
Trigger: GTGCTGACACAGTGTCATGGCGGATTTACTGATGGTGAACAGCCAATCACACTCAGTATTTGTGGACACTCGGTGGAAACCATCAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 90 bp CTGATAGAGTTCAAAGCGGCTGAGCATGATCATCAGGAAGTGGTTTaGGTCCATCATGGAGACACCTGTCTGAAGCATCACTATGTCCTT +
Preference number: 1 (lower is better)
Translates to: LIEFKAAEHDHQEVV*VHHGDTCLKHHYVL
Trigger: AAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 90 bp CCTGGAGAAATGATAAAAATACAGGTTGAACTCTTTGGCACACTCTaGCTTCAGCTCATACATGCCTCGCCCTGTGAGCCCAGGTTTCTT +
Preference number: 1 (lower is better)
Translates to: PGEMIKIQVELFGTL*LQLIHASPCEPRFL
Trigger: AAGAAACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATCATTTCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp CACTTCAGTAATTCCAAGAAGGCATCGAACCCTTGTAAGAACTTCTaGCTCAGCTCATCTGACCACTCCGTTGGTTTGCTAATCAATACA +
Preference number: 1 (lower is better)
Translates to: HFSNSKKASNPCKNF*LSSSDHSVGLLINT
Trigger: TGTATTGATTAGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGGGTTCGATGCCTTCTTGGAATTACTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp ACCAGAGAAGAGTTTTCGCCATCTGGACCTTCTTGTAATCCAACTTaGCACAAAATCCTGCGAAGGCCATCTGAGTATCCAATAACACTT +
Preference number: 1 (lower is better)
Translates to: TREEFSPSGPSCNPT*HKILRRPSEYPITL
Trigger: AAGTGTTATTGGATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAGTTGGATTACAAGAAGGTCCAGATGGCGAAAACTCTTCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 90 bp CTTAACAATACATGCAAACCTGCAAGCAAGCGAGAAATTGGGAGGTaGATGCTAACTTTTTCTTGGGAAACACAGTATCTGATGGTTTCC +
Preference number: 1 (lower is better)
Translates to: LNNTCKPASKREIGR*MLTFSWETQYLMVS
Trigger: GGAAACCATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp CACTTAGAGGTAGGAGCTCTGGAAATTTATATGCCACTTCACTTTTaGTTAACAATACATGCAAACCTGCAAGCAAGCGAGAAATTGGGA +
Preference number: 1 (lower is better)
Translates to: HLEVGALEIYMPLHF*LTIHANLQASEKLG
Trigger: TCCCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 90 bp CACCTGTCTGAAGCATCACTATGTCCTTGTCGAACATCTCTCGCCTaGATTTCACATTATGGTAGTAATAGATCTGATTTACTAGAGAGA +
Preference number: 1 (lower is better)
Translates to: HLSEASLCPCRTSLA*ISHYGSNRSDLLER
Trigger: TCTCTCTAGTAAATCAGATCTATTACTACCATAATGTGAAATGCAGGCGAGAGATGTTCGACAAGGACATAGTGATGCTTCAGACAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTTGGGACATGTCCTCCTaGCAGGCCCCAGGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSWDMSS*QAPGLL
Trigger: AAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCA...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR GCA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTCCTGAGAGCTGGGATTaGAGGCTTGGAGCACTGTAC +
Preference number: 2 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVPESWD*RLGALY
Trigger: GTACAGTGCTCCAAGCCTGCAATCCCAGCTCTCAGG...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CCA 90 bp GTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTAGCTATAGTTCTAGAAAGCCCCAGGGCTCCTTTTaGCCTCTGGTGGACAGCCAG +
Preference number: 2 (lower is better)
Translates to: VRCARAVTVAPSSYSSRKPQGSF*PLVDSQ
Trigger: CTGGCTGTCCACCAGAGGCCAAAAGGAGCCCTGGGG...CTTTCTAGAACTATAGCTACTTGGTGCCACAGTTACGGCTCTGGCACACCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CCA 90 bp AAGGTCTCCAGCATAGCTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCGAGCTTCCTCTGCCTTaGACTGCTCTGCCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: KVSSIARMLGELCGASPGELPLP*TALPWR
Trigger: TCTCCAGGGCAGAGCAGTCCAAGGCAGAGGAAGCTC...GCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp GAGCACTGTACTCAGCCGAGCTCTTACTTGTCTGCTGTGGTCTGCTaGAGGGTGCGCACATGCTCTCTGTTTAGCCTTGGAGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: EHCTQPSSYLSAVVC*RVRTCSLFSLGAEG
Trigger: GCCTTCTGCTCCAAGGCTAAACAGAGAGCATGTGCGCACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTCGGCTGAGTACAGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 90 bp GCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTaGAGACAGGGTCTCCTCAAGTTACCCACGCTGGCCGCAAGCTTG +
Preference number: 2 (lower is better)
Translates to: AGQAAQNTAFWISFG*RQGLLKLPTLAASL
Trigger: CAAGCTTGCGGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR GCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTTTGTCTGCTGTGGTCTaGTTGAGGGTGCGCACATGC +
Preference number: 2 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSLSAVV*LRVRTC
Trigger: GCATGTGCGCACCCTCAAGCAGACCACAGCAGACAA...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR GCA 90 bp AAGGTCTCCAGCATAGCTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCCCTATTAGTGCACACTaGCCTCTTCTGCCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: KVSSIARMLGELCGASPGPISAH*PLLPSG
Trigger: GCCGGAAGGCAGAAGAGGGCAGTGTGCACTAATAGG...GCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp AGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATGGACTCTGACCAGGCACTTTTCAATTTCCGCTaGGCTTCCTCTGCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: RAIPIKCSTLCSMDSDQALFNFR*ASSALD
Trigger: GTCCAAGGCAGAGGAAGCTCAGCGGAAATTGAAAAG...TGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp AAATGTGCAACGGACTCGATGACGCTCTCCATGCCGGTCTCCTTGTTCTCATCTGGCTGCTTCCCACTCTaGCTCCATCTCAATGTGCTG +
Preference number: 2 (lower is better)
Translates to: KCATDSMTLSMPVSLFSSGCFPL*LHLNVL
Trigger: CAGCACATTGAGATGGAGCCAGAGTGGGAAGCAGCC...AGATGAGAACAAGGAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATATGATCATCAGGAAGTaGTTTGGGTCCATCATGGAG +
Preference number: 2 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHMIIRK*FGSIME
Trigger: CTCCATGATGGACCCAAACCACTTCCTGATGATCAT...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp ACAGACCTACGGCCATCTCGATCAACTGTAGTTGCAAAGCCAATGGCTTCCTTCTGCACAAGAGGATCCTaGGGGAGAGCAGAAGGCACA +
Preference number: 2 (lower is better)
Translates to: TDLRPSRSTVVAKPMASFCTRGS*GRAEGT
Trigger: TGTGCCTTCTGCTCTCCCTCAGGATCCTCTTGTGCA...GAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp TTGAACTCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCGGAACTGTGAATATCTaGACCGAGAGGTCTGCGACT +
Preference number: 2 (lower is better)
Translates to: LNSLAHSGFSSYMPRPVSGTVNI*TERSAT
Trigger: AGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCC...GCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp CGGCTTGGTCTGTCTGCTGGTGTTCCTCACAATGACTGTCTTTGCTaGATCACAGTACTGGAAATCTCCATATCGGACAGACCTACGGCC +
Preference number: 2 (lower is better)
Translates to: RLGLSAGVPHNDCLC*ITVLEISISDRPTA
Trigger: GGCCGTAGGTCTGTCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACAGACCAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp CCATCATGGAGACACCTGTCTGAAGCATCACTATGTCCTTGTCGAACATCTCTCCTGCCTCAGCTCATCTaGCCACTCCGTTGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PSWRHLSEASLCPCRTSLLPQLI*PLRWFA
Trigger: AGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAG...GAGAGATGTTCGACAAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp CTCCATGCCGGTCTCCTTGTTCTCATCTTCAGGCAGAGACTTCACCAGCTCACTGGCTTGATGCTCAACTaGTGGATAATCTCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LHAGLLVLIFRQRLHQLTGLMLN*WIISLL
Trigger: CAAGAGGGAGATTATCCATCAGTTGAGCATCAAGCC...AGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATGATAAAAATACAGGTTaGACTCTTTGGCACACTCTG +
Preference number: 2 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHDKNTG*TLWHTL
Trigger: CAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATC...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp AGACCCGTGATGCTCTACAGCCCACTGCAGGATCGTTCCCATGATGTACAGCATGTTCAAACTGGAATCTaGCCTGGGCATCTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: RPVMLYSPLQDRSHDVQHVQTGI*PGHLCV
Trigger: AACACAGAGATGCCCAGGGCAGATTCCAGTTTGAAC...ATGCTGTACATCATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCACGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp AAATGTGCAACGGACTCGATGACGCTCTCCATGCCGGTCTCCTTGTTCTCATCTAGAGCACACCAGTCCTaGACCATTGAGATGACGTGT +
Preference number: 2 (lower is better)
Translates to: KCATDSMTLSMPVSLFSSRAHQS*TIEMTC
Trigger: ACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCT...AGATGAGAACAAGGAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp AAGGTCTCCAGCATAGCTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTGCCTTGGACTGCTCTaGCCTGGAGAAATGATAAAA +
Preference number: 2 (lower is better)
Translates to: KVSSIARMLGELCGASPGCLGLL*PGEMIK
Trigger: TTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGCA...GCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp AGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATGGACTCTGACCAGGCAAGCATGACGTCACACTaGAAGATGTTAACCAGACTC +
Preference number: 2 (lower is better)
Translates to: RAIPIKCSTLCSMDSDQASMTSH*KMLTRL
Trigger: GAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCT...TGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp CTCCATGCCGGTCTCCTTGTTCTCATCTTCAGGCAGAGACTTCACCAGCTCACTTGGTGTTCCTCACAATaGCTGTCTTTGCTTGATCAC +
Preference number: 2 (lower is better)
Translates to: LHAGLLVLIFRQRLHQLTWCSSQ*LSLLDH
Trigger: GTGATCAAGCAAAGACAGTCATTGTGAGGAACACCA...AGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACGAGCTCTTACTTGTCTaGTGTGGTCTGCTTGAGGGT +
Preference number: 2 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDELLLV*CGLLEG
Trigger: ACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTC...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGTGGTGCTTCTCTTCCTaGAGAGCCATCCCGATCAAA +
Preference number: 2 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVWCFSS*RAIPIK
Trigger: TTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCA...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGACAAACTCTCTGTCCTaGGCCTGGGCCGCGCTGAAG +
Preference number: 2 (lower is better)
Translates to: QQKLNLKSKETACAKGRKTNSLS*AWAALK
Trigger: CTTCAGCGCGGCCCAGGCTCAGGACAGAGAGTTTGT...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR TCA 90 bp AGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATGGACTCTGACCAGGCAATGACTGTCTTTGCTTaGTCACAGTACTGGAAATCT +
Preference number: 2 (lower is better)
Translates to: RAIPIKCSTLCSMDSDQAMTVFA*SQYWKS
Trigger: AGATTTCCAGTACTGTGATCAAGCAAAGACAGTCAT...TGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACAGTCTTCAAATTGACTTaGTTTGCTCTGGAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETVFKLT*FALEVR
Trigger: CCTCACCTCCAGAGCAAAGCAAGTCAATTTGAAGAC...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR GCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGCCTTGTAAGAACTTCTaGCTCAGCTCATCTGACCAC +
Preference number: 2 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVPCKNF*LSSSDH
Trigger: GTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGG...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp TCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCCCAGGTTCTCTGTGTTTCAAATaGTCCATGAAAGCCTTAATG +
Preference number: 2 (lower is better)
Translates to: SLAHSGFSSYMPRPVSPGSLCFK*SMKALM
Trigger: CATTAAGGCTTTCATGGACCATTTGAAACACAGAGA...ACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp TCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCCCAGGTAATACTGAGTGTGATTaGCTGTTCACCATCAGTAAA +
Preference number: 2 (lower is better)
Translates to: SLAHSGFSSYMPRPVSPGNTECD*LFTISK
Trigger: TTTACTGATGGTGAACAGCCAATCACACTCAGTATT...ACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp TTGAACTCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCTCTGAAGGGTATAAATaGCTTGCTCATAGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: LNSLAHSGFSSYMPRPVSSEGYK*LAHRCE
Trigger: TTCACACCTATGAGCAAGTCATTTATACCCTTCAGA...GCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp AAGACAAGACATCTAAGAGGATGTTCTATCAACATGGGTGGGCTCAGTTCACTTCGAGAGGTCTGCGACTaGAAACTCTCTGTCGTGGTC +
Preference number: 2 (lower is better)
Translates to: KTRHLRGCSINMGGLSSLREVCD*KLSVVV
Trigger: GACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCG...AAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp GGCAGAACGGTGGCAAAGCCGGAGGAGGGAGTGCTGTATCTTCTTTATTTTCTCCGAACATCTCTCGCCTaGATTTCACATTATGGTAGT +
Preference number: 2 (lower is better)
Translates to: GRTVAKPEEGVLYLLYFLRTSLA*ISHYGS
Trigger: ACTACCATAATGTGAAATGCAGGCGAGAGATGTTCG...GAGAAAATAAAGAAGATACAGCACTCCCTCCTCCGGCTTTGCCACCGTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp TTTCAAACCAAAATTCTGATGAGCAGCCACGGAGGAGTGCATAACTaGAACTTTGAGCGGCTTGGTCTGTCTGCTGGTGTTCCTCACAAT +
Preference number: 2 (lower is better)
Translates to: FQTKILMSSHGGVHN*NFERLGLSAGVPHN
Trigger: ATTGTGAGGAACACCAGCAGACAGACCAAGCCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCTGCTCATCAGAATTTTGGTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGGATGTTCTATCAACATaGGTGGGCTCAGTTCACTTA +
Preference number: 2 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVDVLST*VGSVHL
Trigger: TAAGTGAACTGAGCCCACCCATGTTGATAGAACATC...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp CTCAGCTCATCTGACCACTCCGTTGGTTTGCTAATCAATACATACTaGAGATCTAAGATGAGGCTCTGGACTCTCCTGAACTTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LSSSDHSVGLLINTY*RSKMRLWTLLNLKA
Trigger: AGCCTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGATCTCAAGTATGTATTGATTAGCAAACCAACGGAGTGGTCAGATGAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp ATAGAGTTCAAAGCGGCTGAGCATGATCATCAGGAAGTGGTTTGGGTCCATCATCTTGACACAAAATCCTaGGAAGGCCATCTGAGTATC +
Preference number: 2 (lower is better)
Translates to: IEFKAAEHDHQEVVWVHHLDTKS*EGHLSI
Trigger: GATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAG...ATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp ACCTGCAAGCAAGCGAGAAATTGGGAGGTGAATGCTAACTTTTTCTaGGGAAACACAGTATCTGATGGTTTCCACCGAGTGTCCACAAAT +
Preference number: 2 (lower is better)
Translates to: TCKQARNWEVNANFF*GNTVSDGFHRVSTN
Trigger: ATTTGTGGACACTCGGTGGAAACCATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTTGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp TCTGTGTTTCAAATGGTCCATGAAAGCCTTAATGATAACGGTCATCAGGTTCTCCTCATGAACAACTGGTaGTACACACTCCTAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SVFQMVHESLNDNGHQVLLMNNW*YTLLAP
Trigger: AGGGGCTAGGAGTGTGTATCACCAGTTGTTCATGAG...GAGAACCTGATGACCGTTATCATTAAGGCTTTCATGGACCATTTGAAACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp AAATGTGCAACGGACTCGATGACGCTCTCCATGCCGGTCTCCTTGTTCTCATCTAAATGTTGTAAGTTCTaGCGATCACATCTTCTGATA +
Preference number: 2 (lower is better)
Translates to: KCATDSMTLSMPVSLFSSKCCKF*RSHLLI
Trigger: TATCAGAAGATGTGATCGCCAGAACTTACAACATTT...AGATGAGAACAAGGAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp AAGACAAGACATCTAAGAGGATGTTCTATCAACATGGGTGGGCTCAGTTCACTTTCTAAGATGAGGCTCTaGACTCTCCTGAACTTGAAG +
Preference number: 2 (lower is better)
Translates to: KTRHLRGCSINMGGLSSLSKMRL*TLLNLK
Trigger: CTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGA...AAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR TCA 90 bp AAGACAAGACATCTAAGAGGATGTTCTATCAACATGGGTGGGCTCAGTTCACTTCGAGAAATTGGGAGGTaGATGCTAACTTTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: KTRHLRGCSINMGGLSSLREIGR*MLTFSW
Trigger: CCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCG...AAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp CCATCATGGAGACACCTGTCTGAAGCATCACTATGTCCTTGTCGAACATCTCTCATGCCACTTCACTTTTaGTTAACAATACATGCAAAC +
Preference number: 2 (lower is better)
Translates to: PSWRHLSEASLCPCRTSLMPLHF*LTIHAN
Trigger: GTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCAT...GAGAGATGTTCGACAAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CAA 90 bp TCACTTAGAGGTAGGAGCTCTGGAAATTTATATGCCACTTCACTTTaGCTTAACAATACATGCAAACCTGCAAGCAAGCGAGAAATTGGG +
Preference number: 2 (lower is better)
Translates to: SLRGRSSGNLYATSL*LNNTCKPASKREIG
Trigger: CCCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR GCA 90 bp ATAGAGTTCAAAGCGGCTGAGCATGATCATCAGGAAGTGGTTTGGGTCCATCATGGTCAGTATATCTACTaGATATCGAAACATAATAGC +
Preference number: 2 (lower is better)
Translates to: IEFKAAEHDHQEVVWVHHGQYIY*ISKHNS
Trigger: GCTATTATGTTTCGATATGCAGTAGATATACTGACC...ATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp AAGACAAGACATCTAAGAGGATGTTCTATCAACATGGGTGGGCTCAGTTCACTTAAGCAAGCGAGAAATTaGGAGGTGAATGCTAACTTT +
Preference number: 2 (lower is better)
Translates to: KTRHLRGCSINMGGLSSLKQARN*EVNANF
Trigger: AAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTT...AAGTGAACTGAGCCCACCCATGTTGATAGAACATCCTCTTAGATGTCTTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGACTTTTATCAGTCCCTaGAGCCAGACTAGAAAAATA +
Preference number: 2 (lower is better)
Translates to: QQKLNLKSKETACAKGRKTFISP*SQTRKI
Trigger: TATTTTTCTAGTCTGGCTCCAGGGACTGATAAAAGT...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp TCCCAGTCTCAGGAACCATGGTGGGACATGTCCTCCTaGCAGGCCCCAGGGCTCCTTTTGGCCTCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: SQSQEPWWDMSS*QAPGLLLASGG
Trigger: TCCACCAGAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCCTGAGACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR GCA 72 bp ATCATGTCCTTGTGGGCTTCCAGGGAGGGGGCGTTCTaGAAGGTCTCCAGCATAGCTAGGATGCTCGGGGAG +
Preference number: 3 (lower is better)
Translates to: IMSLWASREGAF*KVSSIARMLGE
Trigger: CTCCCCGAGCATCCTAGCTATGCTGGAGACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAAGGACATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp GGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCGGACAGCCAGCAAGCTaGACACCATCAGCAATGTTG +
Preference number: 3 (lower is better)
Translates to: GTMVGHVLLTGPRAPFGLGQPAS*TPSAML
Trigger: CAACATTGCTGATGGTGTCAAGCTTGCTGGCTGTCC...GAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp ACCCTCTGTAGCATGGACTCTGACCAGGCAGACCCGTaGTGCTCTACAGCCCACTGCAGGATCGTTCCCATG +
Preference number: 3 (lower is better)
Translates to: TLCSMDSDQADP*CSTAHCRIVPM
Trigger: CATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCACGGGTCTGCCTGGTCAGAGTCCATGCTACAGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp CATGCCTCGCCCTGTGAGCCCAGGTTTCTTGAAATGTaGAACGGACTCGATGACGCTCTCCATGCCGGTCTC +
Preference number: 3 (lower is better)
Translates to: HASPCEPRFLEM*NGLDDALHAGL
Trigger: GAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCACAGGGCGAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp GTCTGCACGTGCCCTTCCACGGCGTTCTCCAAGTGGTaGTTCTCTTCCTGGAGAGCCATCCCGATCAAATGC +
Preference number: 3 (lower is better)
Translates to: VCTCPSTAFSKW*FSSWRAIPIKC
Trigger: GCATTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp CTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCTGGTaGACAGCCAGCAAGCTTGACACCATCAGCAATGTT +
Preference number: 3 (lower is better)
Translates to: LLTGPRAPFGLW*TASKLDTISNV
Trigger: AACATTGCTGATGGTGTCAAGCTTGCTGGCTGTCCACCAGAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp CCATCAGCAATGTTGACTGGCTCAGGCTACTGCAGCTaGAGCAGGCAGCGTCCAAAGGAGCTAGACTCCGGT +
Preference number: 3 (lower is better)
Translates to: PSAMLTGSGYCS*SRQRPKELDSG
Trigger: ACCGGAGTCTAGCTCCTTTGGACGCTGCCTGCTTCAGCTGCAGTAGCCTGAGCCAGTCAACATTGCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 72 bp CCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTaGAGAGCCATCCCGATCAAATGCAGCACCCTCTGT +
Preference number: 3 (lower is better)
Translates to: PSTAFSKWCFSS*RAIPIKCSTLC
Trigger: ACAGAGGGTGCTGCATTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp AAGGTCTGCACGTGCCCTTCCACGGCGTTCTCCAAGTaGTGCTTCTCTTCCTGGAGAGCCATCCCGATCAAA +
Preference number: 3 (lower is better)
Translates to: KVCTCPSTAFSK*CFSSWRAIPIK
Trigger: TTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTGCAGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CTCAGCCGAGCTCTTACTTGTCTGCTGTGGTCTGCTTaGGGGTGCGCACATGCTCTCTGTTTAGCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: LSRALTCLLWSA*GCAHALCLALE
Trigger: CTCCAAGGCTAAACAGAGAGCATGTGCGCACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTCGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp CCAAAGGTCGAAAGCATCACCATCCACAGCCCAGTCTaGCTATGCCAAGGGAAGGCGAGACAAAGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: PKVESITIHSPV*LCQGKARQRES
Trigger: GCTCTCCCTTTGTCTCGCCTTCCCTTGGCATAGTCAGACTGGGCTGTGGATGGTGATGCTTTCGACCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp CAAGTGGAAGTAAGACGTGTCGGTAGGGGGAGGACATaGCATTGCCACAGTGTGAGGACTGCCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: QVEVRRVGRGRT*HCHSVRTAIPW
Trigger: CCAGGGAATGGCAGTCCTCACACTGTGGCAATGTCATGTCCTCCCCCTACCGACACGTCTTACTTCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR GCA 72 bp CTCCTAGTGCTGCCTAAGCATCCTGAGAGCTGGGATTaGAGGCTTGGAGCACTGTACTCAGCCGAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: LLVLPKHPESWD*RLGALYSAELL
Trigger: TAAGAGCTCGGCTGAGTACAGTGCTCCAAGCCTGCAATCCCAGCTCTCAGGATGCTTAGGCAGCACTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 72 bp CTTGAACTCCTAGTGCTGCCTAAGCATCCTGAGAGCTaGGATTGCAGGCTTGGAGCACTGTACTCAGCCGAG +
Preference number: 3 (lower is better)
Translates to: LELLVLPKHPES*DCRLGALYSAE
Trigger: CTCGGCTGAGTACAGTGCTCCAAGCCTGCAATCCCAGCTCTCAGGATGCTTAGGCAGCACTAGGAGTTCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 72 bp GGCAGGGCAGGGCAGGCAGCTCAAAACACTGCCTTCTaGATTTCGTTTGGTTTGAGACAGGGTCTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: GRAGQAAQNTAF*ISFGLRQGLLK
Trigger: CTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTACACCATCAGCAATGTaGACTGGCTCAGGCTACTGC +
Preference number: 3 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSTPSAM*TGSGYC
Trigger: GCAGTAGCCTGAGCCAGTCAACATTGCTGATGGTGT...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATAACAGCTTCTTATACTaGAGGTCCATGAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHNSFLY*RSMSRL
Trigger: CAGCCTGCTCATGGACCTCAAGTATAAGAAGCTGTT...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CTGGCTCCATCTCAATGTGCTGTCCCACCTGACGCGTaGTCGGGTCCATTCCCTGCATGCACTTCAGTAATT +
Preference number: 3 (lower is better)
Translates to: LAPSQCAVPPDA*SGPFPACTSVI
Trigger: AATTACTGAAGTGCATGCAGGGAATGGACCCGATCACGCGTCAGGTGGGACAGCACATTGAGATGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp CCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTaGTCTGGATTTCTGACTCTCCTGAGACACGGAGGC +
Preference number: 3 (lower is better)
Translates to: PGDCATCISLSL*SGFLTLLRHGG
Trigger: GCCTCCGTGTCTCAGGAGAGTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp AGAGCCATCCCGATCAAATGCAGCACCCTCTGTAGCATGGACTCTGACCAGGCATCATCAGGAAGTGGTTaGGGTCCATCATGGAGACAC +
Preference number: 3 (lower is better)
Translates to: RAIPIKCSTLCSMDSDQASSGSG*GPSWRH
Trigger: GTGTCTCCATGATGGACCCAAACCACTTCCTGATGA...TGCCTGGTCAGAGTCCATGCTACAGAGGGTGCTGCATTTGATCGGGATGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp AGACCCGTGATGCTCTACAGCCCACTGCAGGATCGTTCCCATGATGTACAGCATGTGAGCCCAGGTTTCTaGAAATGTGCAACGGACTCG +
Preference number: 3 (lower is better)
Translates to: RPVMLYSPLQDRSHDVQHVSPGF*KCATDS
Trigger: CGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCAC...ATGCTGTACATCATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCACGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp AAGGTCTCCAGCATAGCTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTACAGGTTGAACTCTTaGGCACACTCTGGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: KVSSIARMLGELCGASPGYRLNS*AHSGFS
Trigger: GCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTA...GCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAGCTATGCTGGAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTaGGACAGGGTCTCCTCAAGTTACCCACGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: QLKTLPSGFRLV*DRVSSSYPRWP
Trigger: CGGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR GCA 72 bp TGTACTCAGCCGAGCTCTTACTTGTCTGCTGTGGTCTaGTTGAGGGTGCGCACATGCTCTCTGTTTAGCCTT +
Preference number: 3 (lower is better)
Translates to: CTQPSSYLSAVV*LRVRTCSLFSL
Trigger: AAGGCTAAACAGAGAGCATGTGCGCACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTCGGCTGAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 72 bp TTAAACATCTTTAGCAACCACCTGATCATGTCCTTGTaGGCTTCCAGGGAGGGGGCGTTCTGCAAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: LNIFSNHLIMSL*ASREGAFCKVS
Trigger: GGAGACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGATGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp AAATGTGCAACGGACTCGATGACGCTCTCCATGCCGGTCTCCTTGTTCTCATCTTGTCCAACCCCAGGGTaGAATCTTTCTCCCACAAGC +
Preference number: 3 (lower is better)
Translates to: KCATDSMTLSMPVSLFSSCPTPG*NLSPTS
Trigger: GCTTGTGGGAGAAAGATTCAACCCTGGGGTTGGACA...AGATGAGAACAAGGAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGCACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTCAAAGCTAAAAGTCTaGACCAACCATCTACAGCCA +
Preference number: 3 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVSKLKV*TNHLQP
Trigger: TGGCTGTAGATGGTTGGTCAAGACTTTTAGCTTTGA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATGCCCCTTTCCATAATTaGGAATCATTAAGCATCAGT +
Preference number: 3 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHAPFHN*ESLSIS
Trigger: ACTGATGCTTAATGATTCCAAATTATGGAAAGGGGC...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGTCCATGCCGGTCTCCTaGTTCTCATCTTCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVSMPVS*FSSSGR
Trigger: TCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGA...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp GATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTaGAATCTTCTGTGTGAAGGTGAAGGTCTGCACGTG +
Preference number: 3 (lower is better)
Translates to: DARGVMWCITRL*NLLCEGEGLHV
Trigger: CACGTGCAGACCTTCACCTTCACACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp GGCAGCTCCTCACATGATCCTGGAGACTGTGCTACCTaGATTTCTTTGAGCCTCTGGTCTGGATTTCTGACT +
Preference number: 3 (lower is better)
Translates to: GSSSHDPGDCAT*ISLSLWSGFLT
Trigger: AGTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGATCATGTGAGGAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp TTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCCGAACTTATTTCCTGTaGTCTTTCTGGAAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: LTCFALEVRSSPRAEPHPRTYFL*SFWKSQ
Trigger: CTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCG...GGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATCTAATCAATACATACTaGAGATCTAAGATGAGGCTC +
Preference number: 3 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHLINTY*RSKMRL
Trigger: GAGCCTCATCTTAGATCTCAAGTATGTATTGATTAG...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTaGACCTGCTGTCACCATGTCTATGTGACTTCTCTG +
Preference number: 3 (lower is better)
Translates to: LSVPGDWSSSLC*TCCHHVYVTSL
Trigger: CAGAGAAGTCACATAGACATGGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp AGGAGCATTCGCGCAAGTGAAGGAACTGTGAATATCTaGACCGAGAGGTCTGCGACTGAAAACTCTCTGTCG +
Preference number: 3 (lower is better)
Translates to: RSIRASEGTVNI*TERSATENSLS
Trigger: CGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCCTTCACTTGCGCGAATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CATCAGGTTCTCTTCTGTGAGGAGCATTCGCGCAAGTaGAGGAACTGTGAATATCTGAACCGAGAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: HQVLFCEEHSRK*RNCEYLNREVC
Trigger: GCAGACCTCTCGGTTCAGATATTCACAGTTCCTTCACTTGCGCGAATGCTCCTCACAGAAGAGAACCTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp CACTTTTTCGTCCAGAGCACACCAGTCCTGCACCATTaGGATGACGTGTGTCAGCTTCATCTGCAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: HFFVQSTPVLHH*DDVCQLHLQCE
Trigger: TTCACACTGCAGATGAAGCTGACACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCTGGACGAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp TCGGACAGACCTACGGCCATCTCGATCAACTGTAGTTaGAAAGCCAATGGCTTCCTTCTGTGTACAGTTCAC +
Preference number: 3 (lower is better)
Translates to: SDRPTAISINCS*KANGFLLCTVH
Trigger: GTGAACTGTACACAGAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp AGGATCGTTCCCATGATGTACAGCATGACGTCACACTaGAAGATGTTAACCAGACTCGCGAACAAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: RIVPMMYSMTSH*KMLTRLANKGQ
Trigger: CTGCCCTTTGTTCGCGAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCTGTACATCATGGGAACGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp TTCAAAGCGGCTGAGCATGATCATCAGGAAGTGGTTTaGGTCCATCATGGAGACACCTGTCTGAAGCATCAC +
Preference number: 3 (lower is better)
Translates to: FKAAEHDHQEVV*VHHGDTCLKHH
Trigger: GTGATGCTTCAGACAGGTGTCTCCATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp CTCCATGCCGGTCTCCTTGTTCTCATCTTCAGGCAGAGACTTCACCAGCTCACTAAGGGTATAAATGACTaGCTCATAGGTGTGAACCTC +
Preference number: 3 (lower is better)
Translates to: LHAGLLVLIFRQRLHQLTKGIND*LIGVNL
Trigger: GAGGTTCACACCTATGAGCAAGTCATTTATACCCTT...AGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp GGTTTCCACCGAGTGTCCACAAATACTGAGTGTGATTaGCTGTTCACCATCAGTAAATCCGCCATGACACTG +
Preference number: 3 (lower is better)
Translates to: GFHRVSTNTECD*LFTISKSAMTL
Trigger: CAGTGTCATGGCGGATTTACTGATGGTGAACAGCCAATCACACTCAGTATTTGTGGACACTCGGTGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp TTGAGGTCCATGAGCAGGCTGCTCATGAACAACTGGTaGTACACACTCCTAGCCCCTTTCCATAATTTGGAA +
Preference number: 3 (lower is better)
Translates to: LRSMSRLLMNNW*YTLLAPFHNLE
Trigger: TTCCAAATTATGGAAAGGGGCTAGGAGTGTGTATCACCAGTTGTTCATGAGCAGCCTGCTCATGGACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp TATGGTTCCCTCCGCCTCGGCCACAGGGCTGCTGGATaGACACTCTCTTATCTTCTTAATTGCATTAAACAT +
Preference number: 3 (lower is better)
Translates to: YGSLRLGHRAAG*TLSYLLNCIKH
Trigger: ATGTTTAATGCAATTAAGAAGATAAGAGAGTGTTCATCCAGCAGCCCTGTGGCCGAGGCGGAGGGAACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp AATTCCAAGAAGGCATCGAACCCTTGTAAGAACTTCTaGCTCAGCTCATCTGACCACTCCGTTGGTTTGCTA +
Preference number: 3 (lower is better)
Translates to: NSKKASNPCKNF*LSSSDHSVGLL
Trigger: TAGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGGGTTCGATGCCTTCTTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR GCA 72 bp TCAATTAACACTTTTTCGTCCAGAGCACACCAGTCCTaGACCATTGAGATGACGTGTGTCAGCTTCATCTGC +
Preference number: 3 (lower is better)
Translates to: SINTFSSRAHQS*TIEMTCVSFIC
Trigger: GCAGATGAAGCTGACACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCTGGACGAAAAAGTGTTAATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCTGGATTTCGTTTGGTTaGAGACAGGGTCTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTWISFG*RQGLLK
Trigger: CTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCA...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp TGTCTGCTGGTGTTCCTCACAATGACTGTCTTTGCTTaGTCACAGTACTGGAAATCTCCATATCGGACAGAC +
Preference number: 3 (lower is better)
Translates to: CLLVFLTMTVFA*SQYWKSPYRTD
Trigger: GTCTGTCCGATATGGAGATTTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTGAGGAACACCAGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp GAGTTTTCGCCATCTGGACCTTCTTGTAATCCAACTTaGCACAAAATCCTGCGAAGGCCATCTGAGTATCCA +
Preference number: 3 (lower is better)
Translates to: EFSPSGPSCNPT*HKILRRPSEYP
Trigger: TGGATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAGTTGGATTACAAGAAGGTCCAGATGGCGAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp AGGAACTGTGAATATCTGAACCGAGAGGTCTGCGACTaGAAACTCTCTGTCGTGGTCATCTGTCACATAATC +
Preference number: 3 (lower is better)
Translates to: RNCEYLNREVCD*KLSVVVICHII
Trigger: GATTATGTGACAGATGACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR CCA 72 bp CTAATCAATACATACTTGAGATCTAAGATGAGGCTCTaGACTCTCCTGAACTTGAAGGCTTGGAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: LINTYLRSKMRL*TLLNLKAWRAV
Trigger: CACTGCCCTCCAAGCCTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGATCTCAAGTATGTATTGATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp GCATGGATAGAGCTGAGTGGATGTGATTTGAAAGGCTaGGTGAGAGGTTCTTTGATGGTTAGAGAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: AWIELSGCDLKG*VRGSLMVREAE
Trigger: TTCAGCTTCTCTAACCATCAAAGAACCTCTCACTCAGCCTTTCAAATCACATCCACTCAGCTCTATCCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR-3UTR CAA 90 bp ATAGAGTTCAAAGCGGCTGAGCATGATCATCAGGAAGTGGTTTGGGTCCATCATAATGACTGTCTTTGCTaGATCACAGTACTGGAAATC +
Preference number: 3 (lower is better)
Translates to: IEFKAAEHDHQEVVWVHHNDCLC*ITVLEI
Trigger: GATTTCCAGTACTGTGATCAAGCAAAGACAGTCATT...ATGATGGACCCAAACCACTTCCTGATGATCATGCTCAGCCGCTTTGAACTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR TCA 72 bp GCTCTCTGTTTAGCCTTGGAGCAGAAGGCTATAGTCTaGAAAACTAGGAGGTCCTTTACATTTCAAAAAGCC +
Preference number: 3 (lower is better)
Translates to: ALCLALEQKAIV*KTRRSFTFQKA
Trigger: GGCTTTTTGAAATGTAAAGGACCTCCTAGTTTTTCAGACTATAGCCTTCTGCTCCAAGGCTAAACAGAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR TCA 72 bp ACATGCAAACCTGCAAGCAAGCGAGAAATTGGGAGGTaGATGCTAACTTTTTCTTGGGAAACACAGTATCTG +
Preference number: 3 (lower is better)
Translates to: TCKPASKREIGR*MLTFSWETQYL
Trigger: CAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTTGCAGGTTTGCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
3UTR-3UTR CAA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGAGTCCTGTCTTCAAATaGACTTGCTTTGCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: QQKLNLKSKETACAKGRKSPVFK*TCFALE
Trigger: CTCCAGAGCAAAGCAAGTCAATTTGAAGACAGGACT...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CCA 72 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTaGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAA +
Preference number: 3 (lower is better)
Translates to: NRFSRTYFLLSF*KSQLCYKTPSQ
Trigger: TTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACCCAGCGTCGGTGCGGTaGAGAACTGGACAGACAGAG +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNPASVR*RTGQTE
Trigger: CTCTGTCTGTCCAGTTCTTCACCGCACCGACGCTGG...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACCCGCTGAGCTTCCTCTaGCTTGGACTGCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNPLSFL*LGLLCP
Trigger: AGGGCAGAGCAGTCCAAGGCAGAGGAAGCTCAGCGG...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCCCAGGTGCAAACTGCGGTCGATaGCCTGCACCTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLAHSGFSSYMPRPVSPGANCGR*PAPRAP
Trigger: TGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGC...ACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp CTGATGAGCAGCCACGGAGGAGTGCATAACTTGAACTTTGAGCGGCTTGGTCTGCTGCGGTCGATGGCCTaGACCTCGGGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LMSSHGGVHNLNFERLGLLRSMA*TSGSIS
Trigger: GGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAG...CAGACCAAGCCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCTGCTCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACAGCAGTCACCGACACTaGCCGCTCGTGATCATCCTC +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNSSHRH*PLVIIL
Trigger: GAGGATGATCACGAGCGGGCAGTGTCGGTGACTGCT...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACGGTACACTTCTCTGTTaGGGTCGGTTGCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNGTLLC*GRLLAA
Trigger: GGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACC...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTCCATGCCGGTCTCCTTGTTCTCATCTTCAGGCAGAGACTTCACCAGCTCACTGGTCCCAGCAGGATGTaGTGTGCCAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHAGLLVLIFRQRLHQLTGPSRM*CASVSS
Trigger: GGAAGACACGCTGGCACAGCACATCCTGCTGGGACC...AGTGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACTGCATCTCAGACATCTaGGCCATGATCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNCISDI*AMIFSR
Trigger: CCGGGAGAAGATCATGGCCCAGATGTCTGAGATGCA...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTTGTGCAGGTCCCCAGTaGCCAGGCTGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSCAGPQ*PGCFLK
Trigger: TTTCAGGAAGCAGCCTGGCCACTGGGGACCTGCACA...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CACGTGCCCTTCCACGGCGTTCTCCAAGTGGTGCTTCTCTTCCTGGAGAGCCATGAAGGCTTGTTTGCCTaGTCGAGCTTTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: HVPFHGVLQVVLLFLESHEGLFA*SSFGNP
Trigger: GGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTC...ATGGCTCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGTGGAAGGGCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp GGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCAGCCGGAGGAGGGAGTaGTGTATCTTCTTTATTTTC +
Preference number: 4 (lower is better)
Translates to: GTMVGHVLLTGPRAPFGLSRRRE*CIFFIF
Trigger: GAAAATAAAGAAGATACAGCACTCCCTCCTCCGGCT...GAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTCCCCAGTGGCCAGGCTaGTTCCTGAAAAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSPQWPG*FLKNPD
Trigger: GTCAGGATTTTTCAGGAAGCAGCCTGGCCACTGGGG...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 72 bp GCAACGGACTCGATGACGCTCTCCATGCCGGTCTCCTaGTTCTCATCTTCAGGCAGAGACTTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ATDSMTLSMPVS*FSSSGRDFTSS
Trigger: TGAGCTGGTGAAGTCTCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGAGAGCGTCATCGAGTCCGTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp TTGAACTCTTTGGCACACTCTGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCGGTACACTTCTCTGTTaGGGTCGGTTGCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LNSLAHSGFSSYMPRPVSGTLLC*GRLLAA
Trigger: GGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACC...GCTCACAGGGCGAGGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTCTGCGGTCGATGGCCTaGACCTCGGGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGSLMVREAESPFLFLETLRSMA*TSGSIS
Trigger: GGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAG...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGACCCGTGATGCTCTACAGCCCACTGCAGGATCGTTCCCATGATGTACAGCATTTGAGGTCGGTTGCTTaGAGCCATCTCCCTGCGATC +
Preference number: 4 (lower is better)
Translates to: RPVMLYSPLQDRSHDVQHLRSVA*SHLPAI
Trigger: GATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAA...ATGCTGTACATCATGGGAACGATCCTGCAGTGGGCTGTAGAGCATCACGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCGCACTCTCAGGAAGATaGCGGCCCCGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTALSGR*RPRSRR
Trigger: CCTGCGGCTCCGGGGCCGGCATCTTCCTGAGAGTGC...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCGATGTTCTATCAACATaGGTGGGCTCAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: GTMVGHVLLTGPRAPFGLDVLST*VGSVHL
Trigger: TAAGTGAACTGAGCCCACCCATGTTGATAGAACATC...GAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCGCCATGGTAACCAAGTaGAAGATGTGCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTCFALEVRSSPRAEPHPAMVTK*KMCRSP
Trigger: TGGGGACCTGCACATCTTCCACTTGGTTACCATGGC...GGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 72 bp ACTCAGCCGAGCTCTTACTTGTCTGCTGTGGTCTGCTaGAGGGTGCGCACATGCTCTCTGTTTAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TQPSSYLSAVVC*RVRTCSLFSLG
Trigger: TCCAAGGCTAAACAGAGAGCATGTGCGCACCCTCAAGCAGACCACAGCAGACAAGTAAGAGCTCGGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 72 bp AGCTCATACATGCCTCGCCCTGTGAGCCCAGGTTTCTaGAAATGTGCAACGGACTCGATGACGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SSYMPRPVSPGF*KCATDSMTLSM
Trigger: CATGGAGAGCGTCATCGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCACAGGGCGAGGCATGTATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGACTCGGCCACAGAGGTaGGAAGGCTTGTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVTRPQR*EGLFAC
Trigger: GCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGT...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTCCAGCTCTAGGGTCTaGTGGAAGAGCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVSSSRV*WKSSLF
Trigger: AAACAAAGAGCTCTTCCAGCAGACCCTAGAGCTGGA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTCAAATTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGGAGCTTCCTCTGCCTTaGACTGCTCTGCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FKLTCFALEVRSSPRAEPELPLP*TALPWR
Trigger: TCTCCAGGGCAGAGCAGTCCAAGGCAGAGGAAGCTC...CGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCTGCTGCCAGAGCTTCTaGATCTTTCGAAACCGCTCT +
Preference number: 4 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTCCQSF*IFRNRS
Trigger: AGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCA...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 72 bp GCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTaGAGACAGGGTCTCCTCAAGTTACCCACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AAQNTAFWISFG*RQGLLKLPTLA
Trigger: GGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
3UTR CAA 72 bp GCATTAAACATCTTTAGCAACCACCTGATCATGTCCTaGTGGGCTTCCAGGGAGGGGGCGTTCTGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ALNIFSNHLIMS*WASREGAFCKV
Trigger: GACCTTGCAGAACGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGATGTTTAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp AGTCTCAGGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTCGAGAAATTGGGAGGTaGATGCTAACTTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLRNHGGTCPPDRPQGSFREIGR*MLTFSW
Trigger: CCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCG...AAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCCTGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTCGCTGCTCCTTGGCTTaGACGGAATCAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSRCSLA*TESKYL
Trigger: AAGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCG...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACACTGCGGTCGATGGCCTaGACCTCGGGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTLRSMA*TSGSIS
Trigger: GGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAG...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCCCTTGTAAGAACTTCTaGCTCAGCTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTPCKNF*LSSSDH
Trigger: GTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGG...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTGCCTTGGACTGCTCTaGCCTGGAGAAATGATAAAA +
Preference number: 4 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVCLGLL*PGEMIK
Trigger: TTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGCA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCTGGACCACCTTTATCTaGTGTGTTACTGCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTWTTFI*CVTALV
Trigger: GACGAGAGCAGTAACACAGCAGATAAAGGTGGTCCA...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTCTAAGATGAGGCTCTaGACTCTCCTGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVSKMRL*TLLNLK
Trigger: CTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACCAACTTCAGAGCTGCTaGGCTTGTGCTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDQLQSC*ACASGS
Trigger: ACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGTTG...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp ACAGACCTACGGCCATCTCGATCAACTGTAGTTGCAAAGCCAATGGCTTCCTTCCAACTTCAGAGCTGCTaGGCTTGTGCTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TDLRPSRSTVVAKPMASFQLQSC*ACASGS
Trigger: ACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGTTG...GAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACGACACTGCCCGCTCGTaGTCATCCTCCATAAAATCC +
Preference number: 4 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDDTARS*SSSIKS
Trigger: GGATTTTATGGAGGATGATCACGAGCGGGCAGTGTC...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACAACATTCCAGCAAACTaGGGTCGATGGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDNIPAN*GRWPAP
Trigger: AGGTGCAGGCCATCGACCGCAGTTTGCTGGAATGTT...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCACATCTTCTGATAGATaGACAAGAGGATCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTTSSDR*TRGSSS
Trigger: GGAGGAGGATCCTCTTGTGCATCTATCAGAAGATGT...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCAGTCTCAGGAACTTGCTTAACAATACATaGAAACCTGCAAGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: ALEVRSSPRAEPHPSLRNLLNNT*KPASKR
Trigger: TCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAA...GTTCCTGAGACTGGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTACTAGGCACCAAGGATaGAAAGAGTTTACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVTRHQG*KEFTEV
Trigger: CACTTCTGTAAACTCTTTGCATCCTTGGTGCCTAGT...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTACCAAGTGGAAGATGTaGAGGTCCCCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGSLMVREAESPFLFLETTKWKM*RSPVAR
Trigger: CCTGGCCACTGGGGACCTGCACATCTTCCACTTGGT...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGCACTCTCAGGAAGATaGCGGCCCCGGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFALSGR*RPRSRR
Trigger: CCTGCGGCTCCGGGGCCGGCATCTTCCTGAGAGTGC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTAGCTATAGTTCTAGAAAGCCCGGCAGTAGATTTTaGGCACACAGTGGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: VRCARAVTVAPSSYSSRKPGSRF*AHSGLN
Trigger: ATTTAGCCCACTGTGTGCCCAAAATCTACTGCCGGG...CTTTCTAGAACTATAGCTACTTGGTGCCACAGTTACGGCTCTGGCACACCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCCCCAGCACAGGATaGGCACACGGGGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSPSTG*AHGGHL
Trigger: AAGGTGACCCCCGTGTGCCCATCCTGTGCTGGGGGA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACAGCGTGTCTTCCTTCTaGGGGAAGGGGTTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSVSSF*GKGLGP
Trigger: GGGCCCTAACCCCTTCCCTCAGAAGGAAGACACGCT...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTAGCTATAGTTCTAGAAAGATGGAGACACCTGTCTaGAGCATCACTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VRCARAVTVAPSSYSSRKMETPV*SITMSL
Trigger: CAAGGACATAGTGATGCTTCAGACAGGTGTCTCCAT...CTTTCTAGAACTATAGCTACTTGGTGCCACAGTTACGGCTCTGGCACACCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTAGCTATAGTTCTAGAAAGGGCTTGATGCTCAACTaGTGGATAATCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRCARAVTVAPSSYSSRKGLMLN*WIISLL
Trigger: CAAGAGGGAGATTATCCATCAGTTGAGCATCAAGCC...CTTTCTAGAACTATAGCTACTTGGTGCCACAGTTACGGCTCTGGCACACCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTCAAATTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGGATAAAAATCAGGCCTaGAGCCTTCGGGGATCGGTA +
Preference number: 4 (lower is better)
Translates to: FKLTCFALEVRSSPRAEPDKNQA*SLRGSV
Trigger: TACCGATCCCCGAAGGCTTCAGGCCTGATTTTTATC...CGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TCAGACGAGGAAATAGGTGTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTCTTGAAAAAGGTGAATaGGGTTGGTTGGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SDEEIGVRCARAVTVAPSLEKGE*GWLVGK
Trigger: TTTCCCTACCAACCAACCTCATTCACCTTTTTCAAG...ACTTGGTGCCACAGTTACGGCTCTGGCACACCGCACACCTATTTCCTCGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGTCTCAGGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTCAAAATTCTTTCTATaGTCTGGATGGTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: SLRNHGGTCPPDRPQGSFSKFFL*SGWCMH
Trigger: GTGCATACACCATCCAGAGCATAGAAAGAATTTTGA...AAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATCGCGCCAGCGTCGGTaGGGTGAAGAACTGGACAGA +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTSRQRR*GEELDR
Trigger: TCTGTCCAGTTCTTCACCGCACCGACGCTGGCGCGA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGCAAACTGCGGTCGATaGCCTGCACCTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCANCGR*PAPRAP
Trigger: TGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTGCAAACTGCGGTCGATaGCCTGCACCTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFANCGR*PAPRAP
Trigger: TGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGC...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGCCCGGCAGTAGATTTTaGGCACACAGTGGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVPGSRF*AHSGLN
Trigger: ATTTAGCCCACTGTGTGCCCAAAATCTACTGCCGGG...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CCA 90 bp TTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCGTCATCCTATATCGATaGTCTCTATGGATACTTCCC +
Preference number: 4 (lower is better)
Translates to: LTCFALEVRSSPRAEPHPVILYR*SLWILP
Trigger: GGGAAGTATCCATAGAGACCATCGATATAGGATGAC...GGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTCAAATTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCTCTTTGGCACACTCTaGCTTCAGCTCATACATGCC +
Preference number: 4 (lower is better)
Translates to: FKLTCFALEVRSSPRAEPLFGTL*LQLIHA
Trigger: GGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAG...CGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCGACCTGTGTCTGTGCTaGGCCCAGTGCTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTDLCLC*AQCCKS
Trigger: GCTCTTACAGCACTGGGCCCAGCACAGACACAGGTC...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTAGCGTGTCTTCCTTCTaGGGGAAGGGGTTAGGGCCC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCSVSSF*GKGLGP
Trigger: GGGCCCTAACCCCTTCCCTCAGAAGGAAGACACGCT...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGGTCCCAGCAGGATGTaGTGTGCCAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCGPSRM*CASVSS
Trigger: GGAAGACACGCTGGCACAGCACATCCTGCTGGGACC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACAAGCATGACGTCACACTaGAAGATGTTAACCAGACTC +
Preference number: 4 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETSMTSH*KMLTRL
Trigger: GAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCT...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGCAGGAGTAGGTGTGTaGTGTGCAGGCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCAGVGV*CAGSDV
Trigger: GACGTCGGAGCCTGCACAGCACACACCTACTCCTGC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTAGGATGCTCGGGGAGTTATGTGGTGCATCACCAGGCTTTGAAATCTTCTGTGTGCATAAAACACAGGTaGGGTCAACTGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: LGCSGSYVVHHQALKSSVCIKHR*GQLHSL
Trigger: GAGACTGTGCAGTTGACCCCACCTGTGTTTTATGCA...CACAGAAGATTTCAAAGCCTGGTGATGCACCACATAACTCCCCGAGCATCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CCA 90 bp TGGCTTCAGCTCATACATGCCTCGCCCTGTGAGCCCAGGTTTCTTGAAATGTGCGTCATCCTATATCGATaGTCTCTATGGATACTTCCC +
Preference number: 4 (lower is better)
Translates to: WLQLIHASPCEPRFLEMCVILYR*SLWILP
Trigger: GGGAAGTATCCATAGAGACCATCGATATAGGATGAC...GCACATTTCAAGAAACCTGGGCTCACAGGGCGAGGCATGTATGAGCTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CCA 90 bp CTGCTGAACCTGCTGTCACCATGTCTATGTGACTTCTCTGAATGTGACGGATATACGGCGTTCTCCAAGTaGTGCTTCTCTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLNLLSPCLCDFSECDGYTAFSK*CFSSWR
Trigger: TCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGT...ATATCCGTCACATTCAGAGAAGTCACATAGACATGGTGACAGCAGGTTCAGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCTGATCATGTCCTTGTaGGCTTCCAGGGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVLIMSL*ASREGA
Trigger: CGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACTGATCATGTCCTTGTaGGCTTCCAGGGAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQLIMSL*ASREGA
Trigger: CGCCCCCTCCCTGGAAGCCCACAAGGACATGATCAG...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACGGCTGCTGTCAAGAGTaGCAGAGGCAGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNGCCQE*QRQRCP
Trigger: TGGACACCTCTGCCTCTGCCACTCTTGACAGCAGCC...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTCAAATTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGGCCTTCGCTGCTCCTTaGCTTGAACGGAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: FKLTCFALEVRSSPRAEPAFAAP*LERNQN
Trigger: ATTTTGATTCCGTTCAAGCCAAGGAGCAGCGAAGGC...CGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCCCCAGCACAGGATaGGCACACGGGGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKSPSTG*AHGGHL
Trigger: AAGGTGACCCCCGTGTGCCCATCCTGTGCTGGGGGA...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACTGTGCAGGTCCCCAGTaGCCAGGCTGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYCAGPQ*PGCFLK
Trigger: TTTCAGGAAGCAGCCTGGCCACTGGGGACCTGCACA...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
3UTR CAA 72 bp AAAATTCTGATGAGCAGCCACGGAGGAGTGCATAACTaGAACTTTGAGCGGCTTGGTCTGTCTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KILMSSHGGVHN*NFERLGLSAGV
Trigger: AACACCAGCAGACAGACCAAGCCGCTCAAAGTTCAAGTTATGCACTCCTCCGTGGCTGCTCATCAGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGACTCGGCCACAGAGGTaGGAAGGCTTGTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QQKLNLKSKETACAKGRKTRPQR*EGLFAC
Trigger: GCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGT...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTCTCATGAACAACTGGTaGTACACACTCCTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGSLMVREAESPFLFLETLMNNW*YTLLAP
Trigger: AGGGGCTAGGAGTGTGTATCACCAGTTGTTCATGAG...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCAGCAGGATGTGCTGTaGCAGCGTGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNQQDVL*QRVFLL
Trigger: CAGAAGGAAGACACGCTGGCACAGCACATCCTGCTG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGGTCCCAGCAGGATGTaGTGTGCCAGCGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKGPSRM*CASVSS
Trigger: GGAAGACACGCTGGCACAGCACATCCTGCTGGGACC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GTGCGGTGTGCCAGAGCCGTAACTGTGGCACCAAGTAGCTATAGTTCTAGAAAGCGAACATCTCTCGCCTaGATTTCACATTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: VRCARAVTVAPSSYSSRKRTSLA*ISHYGS
Trigger: ACTACCATAATGTGAAATGCAGGCGAGAGATGTTCG...CTTTCTAGAACTATAGCTACTTGGTGCCACAGTTACGGCTCTGGCACACCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCCGCTGAGCTTCCTCTaGCTTGGACTGCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFPLSFL*LGLLCP
Trigger: AGGGCAGAGCAGTCCAAGGCAGAGGAAGCTCAGCGG...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACCCTCGGCCACAGGGCTaGTGGATGAACACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYPRPQG*WMNTLL
Trigger: TAAGAGAGTGTTCATCCAGCAGCCCTGTGGCCGAGG...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTGGGCATGCATAACGTaGCCACAGCTGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNWACIT*PQLPVC
Trigger: ACACACTGGCAGCTGTGGGCACGTTATGCATGCCCA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTACCAAGTGGAAGATGTaGAGGTCCCCAGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFTKWKM*RSPVAR
Trigger: CCTGGCCACTGGGGACCTGCACATCTTCCACTTGGT...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGCAGGAGTAGGTGTGTaGTGTGCAGGCTCCGACGTC +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSAGVGV*CAGSDV
Trigger: GACGTCGGAGCCTGCACAGCACACACCTACTCCTGC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ACAGACCTACGGCCATCTCGATCAACTGTAGTTGCAAAGCCAATGGCTTCCTTCTATCGATGGTCTCTATaGATACTTCCCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TDLRPSRSTVVAKPMASFYRWSL*ILPRKH
Trigger: GTGCTTCCTGGGAAGTATCCATAGAGACCATCGATA...GAAGGAAGCCATTGGCTTTGCAACTACAGTTGATCGAGATGGCCGTAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACGGCTGCTTCCCACTCTaGCTCCATCTCAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYGCFPL*LHLNVL
Trigger: CAGCACATTGAGATGGAGCCAGAGTGGGAAGCAGCC...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTCGTTTGGTTTGAGACAGGGTCTCCTCAAGTTACCCACGCTGGCCGCAAGCTTTGGACTGCTCTGCCCTaGAGAAATGATAAAAATACA +
Preference number: 4 (lower is better)
Translates to: FVWFETGSPQVTHAGRKLWTALP*RNDKNT
Trigger: TGTATTTTTATCATTTCTCCAGGGCAGAGCAGTCCA...AAGCTTGCGGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGAGCTTCCTCTGCCTTaGACTGCTCTGCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQELPLP*TALPWR
Trigger: TCTCCAGGGCAGAGCAGTCCAAGGCAGAGGAAGCTC...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACTTTCTCCTCAGCATCTaGACCACCTTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDFLLSI*TTFICC
Trigger: ACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAA...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAACTCGGCCACAGAGGTaGGAAGGCTTGTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSTRPQR*EGLFAC
Trigger: GCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCAACTTCAGAGCTGCTaGGCTTGTGCTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNQLQSC*ACASGS
Trigger: ACTGCCAGAAGCACAAGCTCAGCAGCTCTGAAGTTG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGCTGCCTCAGCTCATCTaGCCACTCCGTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QQKLNLKSKETACAKGRKLPQLI*PLRWFA
Trigger: AGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAG...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGAACCGTTGACCTCTaGACAAACGCTGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTRTVDL*TNAAKT
Trigger: GGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCT...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACACAATCAGGGAGTTCATaGTGTCACTGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETQSGSS*CHCFLE
Trigger: TTCAAGAAAACAGTGACATCATGAACTCCCTGATTG...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTTGAGGTCGGTTGCTTaGAGCCATCTCCCTGCGATC +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVLRSVA*SHLPAI
Trigger: GATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTCAGCAGGATGTGCTGTaGCAGCGTGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCQQDVL*QRVFLL
Trigger: CAGAAGGAAGACACGCTGGCACAGCACATCCTGCTG...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TCTGTGTTTCAAATGGTCCATGAAAGCCTTAATGATAACGGTCATCAGGTTCTCCAGCAGGATGTGCTGTaGCAGCGTGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVFQMVHESLNDNGHQVLQQDVL*QRVFLL
Trigger: CAGAAGGAAGACACGCTGGCACAGCACATCCTGCTG...GAGAACCTGATGACCGTTATCATTAAGGCTTTCATGGACCATTTGAAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACACACAATGACTGTCTTTaGTTGATCACAGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETHNDCL*LITVLE
Trigger: TTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTG...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACCTCGGCCACAGGGCTaGTGGATGAACACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQPRPQG*WMNTLL
Trigger: TAAGAGAGTGTTCATCCAGCAGCCCTGTGGCCGAGG...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACTCAATGAAGTGCCGCTaGATCTCAGACATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYSMKCR*ISDIWA
Trigger: GGCCCAGATGTCTGAGATGCAGCGGCACTTCATTGA...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCAATGAAGTGCCGCTaGATCTCAGACATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSMKCR*ISDIWA
Trigger: GGCCCAGATGTCTGAGATGCAGCGGCACTTCATTGA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTCCTCTGAACAAACGCTaGCAAGACCATCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCPLNKR*QDHRPA
Trigger: AGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGG...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTCCTCTGAACAAACGCTaGCAAGACCATCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSPLNKR*QDHRPA
Trigger: AGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGG...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTGGCTGCTTCCCACTCTaGCTCCATCTCAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFGCFPL*LHLNVL
Trigger: CAGCACATTGAGATGGAGCCAGAGTGGGAAGCAGCC...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGACCTGTGTCTGTGCTaGGCCCAGTGCTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKDLCLC*AQCCKS
Trigger: GCTCTTACAGCACTGGGCCCAGCACAGACACAGGTC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACGCCATGGTAACCAAGTaGAAGATGTGCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYAMVTK*KMCRSP
Trigger: TGGGGACCTGCACATCTTCCACTTGGTTACCATGGC...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGGTACACTTCTCTGTTaGGGTCGGTTGCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFGTLLC*GRLLAA
Trigger: GGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCGAGAGGTCTGCGACTaGAAACTCTCTGTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFREVCD*KLSVVV
Trigger: GACCACGACAGAGAGTTTTCAGTCGCAGACCTCTCG...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000113335.4
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCTGCCTCAGCTCATCTaGCCACTCCGTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFLPQLI*PLRWFA
Trigger: AGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAG...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAGGGAAACACAGTATCTaGTGGTTTCCACCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTGKHSI*WFPPSV
Trigger: GACACTCGGTGGAAACCATCAGATACTGTGTTTCCC...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACGGGAAACACAGTATCTaGTGGTTTCCACCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNGKHSI*WFPPSV
Trigger: GACACTCGGTGGAAACCATCAGATACTGTGTTTCCC...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTGTCCAACCCCAGGGTTaGATCTTTCTCCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFVQPQG*IFLPQA
Trigger: TGCTTGTGGGAGAAAGATTCAACCCTGGGGTTGGAC...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACACTTTTCAATTTCCGCTaGGCTTCCTCTGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTLFNFR*ASSALD
Trigger: GTCCAAGGCAGAGGAAGCTCAGCGGAAATTGAAAAG...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCTTTTCAATTTCCGCTaGGCTTCCTCTGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNLFNFR*ASSALD
Trigger: GTCCAAGGCAGAGGAAGCTCAGCGGAAATTGAAAAG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTAGAACCGTTGACCTCTaGACAAACGCTGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCRTVDL*TNAAKT
Trigger: GGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCT...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACAACAGATCGGGGTGCATaGATAATGGATCATATTTTT +
Preference number: 4 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETTDRGA*IMDHIF
Trigger: AAAAATATGATCCATTATTCATGCACCCCGATCTGT...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGGTCCGATCTCCTCTGTaGTACTATGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QQKLNLKSKETACAKGRKVRSPL*YYAAAR
Trigger: TCTGGCAGCAGCATAGTATCACAGAGGAGATCGGAC...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTTTGAGGTCGGTTGCTTaGAGCCATCTCCCTGCGATC +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFLRSVA*SHLPAI
Trigger: GATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAA...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATGGGCATGCATAACGTaGCCACAGCTGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSWACIT*PQLPVC
Trigger: ACACACTGGCAGCTGTGGGCACGTTATGCATGCCCA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGCCAACAATGGGCATaGATAACGTGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFCQQWA*ITCPQL
Trigger: CAGCTGTGGGCACGTTATGCATGCCCATTGTTGGCA...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATGCCAACAATGGGCATaGATAACGTGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQCQQWA*ITCPQL
Trigger: CAGCTGTGGGCACGTTATGCATGCCCATTGTTGGCA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACCCCAGTGGCCAGGCTaGTTCCTGAAAAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSPQWPG*FLKNPD
Trigger: GTCAGGATTTTTCAGGAAGCAGCCTGGCCACTGGGG...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCTCTGTGATACTATaGTGCTGCCAGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSSVIL*CCQSFW
Trigger: CCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCCCGGCAGTAGATTTTaGGCACACAGTGGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNPGSRF*AHSGLN
Trigger: ATTTAGCCCACTGTGTGCCCAAAATCTACTGCCGGG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCTGCATAAAACACAGGTaGGGTCAACTGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTCIKHR*GQLHSL
Trigger: GAGACTGTGCAGTTGACCCCACCTGTGTTTTATGCA...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACCTCTTTGGCACACTCTaGCTTCAGCTCATACATGCC +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYLFGTL*LQLIHA
Trigger: GGCATGTATGAGCTGAAGCCAGAGTGTGCCAAAGAG...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACTGGTGCTTCTCTTCCTaGAGAGCCATCCCGATCAAA +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYWCFSS*RAIPIK
Trigger: TTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCA...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACGGCGTTCTCCAAGTaGTGCTTCTCTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVTAFSK*CFSSWR
Trigger: TCTCCAGGAAGAGAAGCACCACTTGGAGAACGCCGT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATGCATCTCAGACATCTaGGCCATGATCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQCISDI*AMIFSR
Trigger: CCGGGAGAAGATCATGGCCCAGATGTCTGAGATGCA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCTGTGCAAAGAGAGAATaGCCAGTTCTTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTCAKRE*PVLLPQ
Trigger: CTGGGGAAGAAGAACTGGCCATTCTCTCTTTGCACA...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGGTGCGGTGAAGAACTaGACAGACAGAGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKGAVKN*TDRAVT
Trigger: GGTGACTGCTCTGTCTGTCCAGTTCTTCACCGCACC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTCTCATGAACAACTGGTaGTACACACTCCTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCLMNNW*YTLLAP
Trigger: AGGGGCTAGGAGTGTGTATCACCAGTTGTTCATGAG...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGTCCAACCCCAGGGTTaGATCTTTCTCCCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFVQPQG*IFLPQA
Trigger: TGCTTGTGGGAGAAAGATTCAACCCTGGGGTTGGAC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACGGCTTGATGCTCAACTaGTGGATAATCTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNGLMLN*WIISLL
Trigger: CAAGAGGGAGATTATCCATCAGTTGAGCATCAAGCC...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACTCTTTAGCAACCACCTaGTCATGTCCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYSLATT*SCPCGL
Trigger: AAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGA...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACCACAGGGCTGCTGGATaGACACTCTCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYHRAAG*TLSYLL
Trigger: AAGAAGATAAGAGAGTGTTCATCCAGCAGCCCTGTG...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGATAAAAATCAGGCCTaGAGCCTTCGGGGATCGGTA +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQDKNQA*SLRGSV
Trigger: TACCGATCCCCGAAGGCTTCAGGCCTGATTTTTATC...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCACCTTCATTAGGATaGACCTTCAGTCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSPSLG*TFSPTL
Trigger: CAAGGTGGGACTGAAGGTTCATCCTAATGAAGGTGA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCTTCCTGAAAAATCCTaGCACTGCAGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNLPEKS*HCRAGK
Trigger: TTTCCCAGCTCTGCAGTGTCAGGATTTTTCAGGAAG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTGCTAAAAATAGCACCTaGCATTCCCGCACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSAKNST*HSRTLR
Trigger: CCTGAGAGTGCGGGAATGTCAGGTGCTATTTTTAGC...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGTCCGATCTCCTCTGTaGTACTATGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFVRSPL*YYAAAR
Trigger: TCTGGCAGCAGCATAGTATCACAGAGGAGATCGGAC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAACATTCCAGCAAACTaGGGTCGATGGCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSNIPAN*GRWPAP
Trigger: AGGTGCAGGCCATCGACCGCAGTTTGCTGGAATGTT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAGTTCAAACTGGAATCTaGCCTGGGCATCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTVQTGI*PGHLCV
Trigger: AACACAGAGATGCCCAGGGCAGATTCCAGTTTGAAC...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATCGGGTCCATTCCCTaGATGCACTTCAGTAATTCC +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYIGSIP*MHFSNS
Trigger: GGAATTACTGAAGTGCATGCAGGGAATGGACCCGAT...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTAGAGCACACCAGTCCTaGACCATTGAGATGACGTGT +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSRAHQS*TIEMTC
Trigger: ACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCT...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACAATACTGAGTGTGATTaGCTGTTCACCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDNTECD*LFTISK
Trigger: TTTACTGATGGTGAACAGCCAATCACACTCAGTATT...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATACCTTTGCCAACAATaGGCATGCATAACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTYLCQQ*ACITCP
Trigger: TGGGCACGTTATGCATGCCCATTGTTGGCAAAGGTA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGCTGCCAGAGCTTCTaGATCTTTCGAAACCGCTCT +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFCCQSF*IFRNRS
Trigger: AGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCA...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
3UTR CAA 72 bp CAAGCGAGAAATTGGGAGGTGAATGCTAACTTTTTCTaGGGAAACACAGTATCTGATGGTTTCCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: QARNWEVNANFF*GNTVSDGFHRV
Trigger: CACTCGGTGGAAACCATCAGATACTGTGTTTCCCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATGGTGTTCCTCACAATaGCTGTCTTTGCTTGATCAC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTWCSSQ*LSLLDH
Trigger: GTGATCAAGCAAAGACAGTCATTGTGAGGAACACCA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGGAACTGTGAATATCTaGACCGAGAGGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFGTVNI*TERSAT
Trigger: AGTCGCAGACCTCTCGGTTCAGATATTCACAGTTCC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000113335.4
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATGGAGACACCTGTCTaGAGCATCACTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVMETPV*SITMSL
Trigger: CAAGGACATAGTGATGCTTCAGACAGGTGTCTCCAT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCATAGTCAGGCGTGCTaGAGAGCTGATAGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVHSQAC*RADRVQ
Trigger: TTGAACTCTATCAGCTCTTCAGCACGCCTGACTATG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACATAGTCAGGCGTGCTaGAGAGCTGATAGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQHSQAC*RADRVQ
Trigger: TTGAACTCTATCAGCTCTTCAGCACGCCTGACTATG...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTCTTTAGCAACCACCTaGTCATGTCCTTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSSLATT*SCPCGL
Trigger: AAGCCCACAAGGACATGATCAGGTGGTTGCTAAAGA...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTTTGTCCTTGTCTCTTaGGCTCTCCTCCATTATGGT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNFVLVS*ALLHYG
Trigger: ACCATAATGGAGGAGAGCTCAAGAGACAAGGACAAA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCGCTGCTCCTTGGCTTaGACGGAATCAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVRCSLA*TESKYL
Trigger: AAGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAATTTAACCTCCTGCTaGGGATGCTCCTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSNLTSC*GCSWEE
Trigger: TTCCTCCCAGGAGCATCCTCAGCAGGAGGTTAAATT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCACCTTCATTAGGATaGACCTTCAGTCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFSPSLG*TFSPTL
Trigger: CAAGGTGGGACTGAAGGTTCATCCTAATGAAGGTGA...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCTTCCTGAAAAATCCTaGCACTGCAGAGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVLPEKS*HCRAGK
Trigger: TTTCCCAGCTCTGCAGTGTCAGGATTTTTCAGGAAG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGCTAAAAATAGCACCTaGCATTCCCGCACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKAKNST*HSRTLR
Trigger: CCTGAGAGTGCGGGAATGTCAGGTGCTATTTTTAGC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGAAGGCTTGTTTGCCTaGTCGAGCTTTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKEGLFA*SSFGNP
Trigger: GGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGAAGGCTTGTTTGCCTaGTCGAGCTTTGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSEGLFA*SSFGNP
Trigger: GGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACATCTTCTGATAGATaGACAAGAGGATCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTTSSDR*TRGSSS
Trigger: GGAGGAGGATCCTCTTGTGCATCTATCAGAAGATGT...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCTTGACACAAAATCCTaGGAAGGCCATCTGAGTATC +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNLDTKS*EGHLSI
Trigger: GATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGTTCAAACTGGAATCTaGCCTGGGCATCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQVQTGI*PGHLCV
Trigger: AACACAGAGATGCCCAGGGCAGATTCCAGTTTGAAC...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGAGCACACCAGTCCTaGACCATTGAGATGACGTGT +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSRAHQS*TIEMTC
Trigger: ACACGTCATCTCAATGGTGCAGGACTGGTGTGCTCT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCCAATACATGCAAACCTaGAAGCAAGCGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTQYMQT*KQARNW
Trigger: CCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTG...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTGGACCACCTTTATCTaGTGTGTTACTGCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSWTTFI*CVTALV
Trigger: GACGAGAGCAGTAACACAGCAGATAAAGGTGGTCCA...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATCTGTGATACTATGCTaGTGCCAGAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQSVILC*CQSFWI
Trigger: GATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGTCTGTGATACTATGCTaGTGCCAGAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: QQKLNLKSKETACAKGRKSVILC*CQSFWI
Trigger: GATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGA...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCAGTGGGCTAAATGCTaGTACACTTCTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVQWAKC*YTSLLR
Trigger: CCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAACAGAAGCTGAACTTAAAATCTAAAGAAACGGCATGTGCCAAAGGTCGAAAGCAGTGGGCTAAATGCTaGTACACTTCTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QQKLNLKSKETACAKGRKQWAKC*YTSLLR
Trigger: CCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTG...CTTTCGACCTTTGGCACATGCCGTTTCTTTAGATTTTAAGTTCAGCTTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATGCATAAAACACAGGTaGGGTCAACTGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQCIKHR*GQLHSL
Trigger: GAGACTGTGCAGTTGACCCCACCTGTGTTTTATGCA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACATGATCATCAGGAAGTaGTTTGGGTCCATCATGGAG +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNMIIRK*FGSIME
Trigger: CTCCATGATGGACCCAAACCACTTCCTGATGATCAT...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATGGTGCTTCTCTTCCTaGAGAGCCATCCCGATCAAA +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSWCFSS*RAIPIK
Trigger: TTTGATCGGGATGGCTCTCCAGGAAGAGAAGCACCA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTAGCTCTAGGGTCTGCTaGAAGAGCTCTTTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSSSRVC*KSSLFS
Trigger: CGAAAACAAAGAGCTCTTCCAGCAGACCCTAGAGCT...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGCCTTCGCTGCTCCTTaGCTTGAACGGAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCAFAAP*LERNQN
Trigger: ATTTTGATTCCGTTCAAGCCAAGGAGCAGCGAAGGC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTTTCTCCTCAGCATCTaGACCACCTTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNFLLSI*TTFICC
Trigger: ACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGTGCAAAGAGAGAATaGCCAGTTCTTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFCAKRE*PVLLPQ
Trigger: CTGGGGAAGAAGAACTGGCCATTCTCTCTTTGCACA...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
3UTR CAA 72 bp AACTTCTGCCTCAGCTCATCTGACCACTCCGTTGGTTaGCTAATCAATACATACTTGAGATCTAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: NFCLSSSDHSVG*LINTYLRSKMR
Trigger: CCTCATCTTAGATCTCAAGTATGTATTGATTAGCAAACCAACGGAGTGGTCAGATGAGCTGAGGCAGAAGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTGGTGTTCCTCACAATaGCTGTCTTTGCTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVWCSSQ*LSLLDH
Trigger: GTGATCAAGCAAAGACAGTCATTGTGAGGAACACCA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGCACAGGGCTGCTGGATaGACACTCTCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKHRAAG*TLSYLL
Trigger: AAGAAGATAAGAGAGTGTTCATCCAGCAGCCCTGTG...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGCTTTGTTTTCGTCAATaGAGTGCCGCTGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKLCFRQ*SAAASQ
Trigger: CTGAGATGCAGCGGCACTTCATTGACGAAAACAAAG...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCTTTGTTTTCGTCAATaGAGTGCCGCTGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFLCFRQ*SAAASQ
Trigger: CTGAGATGCAGCGGCACTTCATTGACGAAAACAAAG...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACACAGTGGGCTAAATaGTGGTACACTTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVTQWAK*WYTSLL
Trigger: CAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TCTGTGTTTCAAATGGTCCATGAAAGCCTTAATGATAACGGTCATCAGGTTCTCACACAGTGGGCTAAATaGTGGTACACTTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVFQMVHESLNDNGHQVLTQWAK*WYTSLL
Trigger: CAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGT...GAGAACCTGATGACCGTTATCATTAAGGCTTTCATGGACCATTTGAAACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCCTTGACACAAAATCCTaGGAAGGCCATCTGAGTATC +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVLDTKS*EGHLSI
Trigger: GATACTCAGATGGCCTTCGCAGGATTTTGTGTCAAG...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGCCTTGTAAGAACTTCTaGCTCAGCTCATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKPCKNF*LSSSDH
Trigger: GTGGTCAGATGAGCTGAGGCAGAAGTTCTTACAAGG...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAATCGGGTCCATTCCCTaGATGCACTTCAGTAATTCC +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSIGSIP*MHFSNS
Trigger: GGAATTACTGAAGTGCATGCAGGGAATGGACCCGAT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTGCCTTGGACTGCTCTaGCCTGGAGAAATGATAAAA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVCLGLL*PGEMIK
Trigger: TTTTATCATTTCTCCAGGGCAGAGCAGTCCAAGGCA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTAGCATGACGTCACACTaGAAGATGTTAACCAGACTC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCSMTSH*KMLTRL
Trigger: GAGTCTGGTTAACATCTTGCAGTGTGACGTCATGCT...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATCCAGCTCTAGGGTCTaGTGGAAGAGCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSSSSRV*WKSSLF
Trigger: AAACAAAGAGCTCTTCCAGCAGACCCTAGAGCTGGA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGCACGAGAAATTGGATaGTTGGTTAATGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQAREIG*LVNEAA
Trigger: AGCAGCCTCATTAACCAAGCATCCAATTTCTCGTGC...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCGCACGAGAAATTGGATaGTTGGTTAATGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVAREIG*LVNEAA
Trigger: AGCAGCCTCATTAACCAAGCATCCAATTTCTCGTGC...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTATCGATGGTCTCTATaGATACTTCCCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCYRWSL*ILPRKH
Trigger: GTGCTTCCTGGGAAGTATCCATAGAGACCATCGATA...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAGTCATCCTATATCGATaGTCTCTATGGATACTTCCC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTVILYR*SLWILP
Trigger: GGGAAGTATCCATAGAGACCATCGATATAGGATGAC...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTCTAAGATGAGGCTCTaGACTCTCCTGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSSKMRL*TLLNLK
Trigger: CTTCAAGTTCAGGAGAGTCCAGAGCCTCATCTTAGA...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTAGCTCTAGGGTCTGCTaGAAGAGCTCTTTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFSSRVC*KSSLFS
Trigger: CGAAAACAAAGAGCTCTTCCAGCAGACCCTAGAGCT...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTTACCTTTGCCAACAATaGGCATGCATAACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFYLCQQ*ACITCP
Trigger: TGGGCACGTTATGCATGCCCATTGTTGGCAAAGGTA...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
3UTR CAA 72 bp GGTAGGAGCTCTGGAAATTTATATGCCACTTCACTTTaGCTTAACAATACATGCAAACCTGCAAGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: GRSSGNLYATSL*LNNTCKPASKR
Trigger: TCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCATATAAATTTCCAGAGCTCCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR TCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATGACTGTCTTTGCTTaGTCACAGTACTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYMTVFA*SQYWKS
Trigger: AGATTTCCAGTACTGTGATCAAGCAAAGACAGTCAT...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACGATAAAAATACAGGTTaGACTCTTTGGCACACTCTG +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYDKNTG*TLWHTL
Trigger: CAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATC...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTTTTGTCCTTGTCTCTTaGGCTCTCCTCCATTATGGT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFFVLVS*ALLHYG
Trigger: ACCATAATGGAGGAGAGCTCAAGAGACAAGGACAAA...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTACCTCTTGCTCCTCTTaGCATAATATACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSTSCSS*HNIQVT
Trigger: TGTCACCTGTATATTATGTCAAGAGGAGCAAGAGGT...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTCTTGAAAAAGGTGAATaGGGTTGGTTGGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSLEKGE*GWLVGK
Trigger: TTTCCCTACCAACCAACCTCATTCACCTTTTTCAAG...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGACACAGTGGGCTAAATaGTGGTACACTTCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKTQWAK*WYTSLL
Trigger: CAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGT...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTCGAACATCTCTCGCCTaGATTTCACATTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSRTSLA*ISHYGS
Trigger: ACTACCATAATGTGAAATGCAGGCGAGAGATGTTCG...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGAGCCGGAGGAGGGAGTaGTGTATCTTCTTTATTTTC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKSRRRE*CIFFIF
Trigger: GAAAATAAAGAAGATACAGCACTCCCTCCTCCGGCT...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACCAAGACAGATCGGGGTaGATGAATAATGGATCATAT +
Preference number: 4 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYQDRSG*MNNGSY
Trigger: ATATGATCCATTATTCATGCACCCCGATCTGTCTTG...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTATCGATGGTCTCTATaGATACTTCCCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKYRWSL*ILPRKH
Trigger: GTGCTTCCTGGGAAGTATCCATAGAGACCATCGATA...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTAAATGTTGTAAGTTCTaGCGATCACATCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RGSLMVREAESPFLFLETKCCKF*RSHLLI
Trigger: TATCAGAAGATGTGATCGCCAGAACTTACAACATTT...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAGCAAGCGAGAAATTaGGAGGTGAATGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTKQARN*EVNANF
Trigger: AAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTT...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAGATGTTCTATCAACATaGGTGGGCTCAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQDVLST*VGSVHL
Trigger: TAAGTGAACTGAGCCCACCCATGTTGATAGAACATC...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAATGATCATCAGGAAGTaGTTTGGGTCCATCATGGAG +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSMIIRK*FGSIME
Trigger: CTCCATGATGGACCCAAACCACTTCCTGATGATCAT...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATGGACTGCTCTGCCCTaGAGAAATGATAAAAATACA +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTWTALP*RNDKNT
Trigger: TGTATTTTTATCATTTCTCCAGGGCAGAGCAGTCCA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATGTGCCAGATCTGGTTaGTCTGAAAAATTTAACCTC +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTCARSG*SEKFNL
Trigger: GAGGTTAAATTTTTCAGACCAACCAGATCTGGCACA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATCGGTATTATATTCATaGCTTCTGTGTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTSVLYS*LLCPLK
Trigger: CTTCAGAGGACACAGAAGCCATGAATATAATACCGA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTGCTGCTGTAATCCTCTaGAAGGTCTATCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSAAVIL*KVYQFV
Trigger: AACAAACTGATAGACCTTCCAGAGGATTACAGCAGC...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTCTGAAGGGTATAAATaGCTTGCTCATAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVSEGYK*LAHRCE
Trigger: TTCACACCTATGAGCAAGTCATTTATACCCTTCAGA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGCGAGAAATTGGGAGGTaGATGCTAACTTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKREIGR*MLTFSW
Trigger: CCAAGAAAAAGTTAGCATTCACCTCCCAATTTCTCG...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTACCTCTTGCTCCTCTTaGCATAATATACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFTSCSS*HNIQVT
Trigger: TGTCACCTGTATATTATGTCAAGAGGAGCAAGAGGT...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACAATACATGCAAACCTaGAAGCAAGCGAGAAATTGG +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSQYMQT*KQARNW
Trigger: CCAATTTCTCGCTTGCTTGCAGGTTTGCATGTATTG...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTTGCTTAACAATACATaGAAACCTGCAAGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVLLNNT*KPASKR
Trigger: TCGCTTGCTTGCAGGTTTGCATGTATTGTTAAGCAA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACAAGACAGATCGGGGTaGATGAATAATGGATCATAT +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQQDRSG*MNNGSY
Trigger: ATATGATCCATTATTCATGCACCCCGATCTGTCTTG...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTACTAGGCACCAAGGATaGAAAGAGTTTACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFTRHQG*KEFTEV
Trigger: CACTTCTGTAAACTCTTTGCATCCTTGGTGCCTAGT...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGATTCTCTTGATCCATaGCATTCTCTTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCDSLDP*HSLLYM
Trigger: CATGTACAGAAGAGAATGGCATGGATCAAGAGAATC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAATACTGAGTGTGATTaGCTGTTCACCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: DSAELISCCLSGKASCVTNTECD*LFTISK
Trigger: TTTACTGATGGTGAACAGCCAATCACACTCAGTATT...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGCTGCTGTAATCCTCTaGAAGGTCTATCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSAAVIL*KVYQFV
Trigger: AACAAACTGATAGACCTTCCAGAGGATTACAGCAGC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATCTGAAGGGTATAAATaGCTTGCTCATAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSSEGYK*LAHRCE
Trigger: TTCACACCTATGAGCAAGTCATTTATACCCTTCAGA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGATGACTGTCTTTGCTTaGTCACAGTACTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKMTVFA*SQYWKS
Trigger: AGATTTCCAGTACTGTGATCAAGCAAAGACAGTCAT...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTGATAAAAATACAGGTTaGACTCTTTGGCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFDKNTG*TLWHTL
Trigger: CAGAGTGTGCCAAAGAGTTCAACCTGTATTTTTATC...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTACAGATCGGGGTGCATaGATAATGGATCATATTTTT +
Preference number: 4 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCTDRGA*IMDHIF
Trigger: AAAAATATGATCCATTATTCATGCACCCCGATCTGT...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR TCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACAATCAGGGAGTTCATaGTGTCACTGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSQSGSS*CHCFLE
Trigger: TTCAAGAAAACAGTGACATCATGAACTCCCTGATTG...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACACAATGACTGTCTTTaGTTGATCACAGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSHNDCL*LITVLE
Trigger: TTCCAGTACTGTGATCAAGCAAAGACAGTCATTGTG...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTCAAAATTCTTTCTATaGTCTGGATGGTGTATGCAC +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFSKFFL*SGWCMH
Trigger: GTGCATACACCATCCAGAGCATAGAAAGAATTTTGA...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGATTCTCTTGATCCATaGCATTCTCTTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSDSLDP*HSLLYM
Trigger: CATGTACAGAAGAGAATGGCATGGATCAAGAGAATC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATCTCTGTGTTTCAAATaGTCCATGAAAGCCTTAATG +
Preference number: 4 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQSLCFK*SMKALM
Trigger: CATTAAGGCTTTCATGGACCATTTGAAACACAGAGA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTAAGCAAGCGAGAAATTaGGAGGTGAATGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFKQARN*EVNANF
Trigger: AAAGTTAGCATTCACCTCCCAATTTCTCGCTTGCTT...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTGTGCCAGATCTGGTTaGTCTGAAAAATTTAACCTC +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKCARSG*SEKFNL
Trigger: GAGGTTAAATTTTTCAGACCAACCAGATCTGGCACA...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCGGTATTATATTCATaGCTTCTGTGTCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKSVLYS*LLCPLK
Trigger: CTTCAGAGGACACAGAAGCCATGAATATAATACCGA...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
3UTR CAA 72 bp TGTACAGTTCACAGCTTTCTGAAGGGTATAAATGACTaGCTCATAGGTGTGAACCTCATCATTAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: CTVHSFLKGIND*LIGVNLIIKQH
Trigger: ATGCTGTTTAATGATGAGGTTCACACCTATGAGCAAGTCATTTATACCCTTCAGAAAGCTGTGAACTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR GCA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTGGTCAGTATATCTACTaGATATCGAAACATAATAGC +
Preference number: 4 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFGQYIY*ISKHNS
Trigger: GCTATTATGTTTCGATATGCAGTAGATATACTGACC...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTATGCCACTTCACTTTTaGTTAACAATACATGCAAAC +
Preference number: 4 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSMPLHF*LTIHAN
Trigger: GTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCAT...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAATGTTGTAAGTTCTaGCGATCACATCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVKCCKF*RSHLLI
Trigger: TATCAGAAGATGTGATCGCCAGAACTTACAACATTT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATCTCTGTGTTTCAAATaGTCCATGAAAGCCTTAATG +
Preference number: 4 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSSLCFK*SMKALM
Trigger: CATTAAGGCTTTCATGGACCATTTGAAACACAGAGA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCTTTCGAAACCGCTCTTaGCATAAATGTAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LISCCLSGKASCVTKLQVFRNRS*HKCKGF
Trigger: AAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAA...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR GCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTATGCCACTTCACTTTTaGTTAACAATACATGCAAAC +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFMPLHF*LTIHAN
Trigger: GTTTGCATGTATTGTTAAGCAAAAGTGAAGTGGCAT...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CCA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTTTTCGAAACCGCTCTTaGCATAAATGTAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFFRNRS*HKCKGF
Trigger: AAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAA...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp TCAGGAAGATGCCGGCCCCGGAGCCGCAGGAGTAGGTGTGTGCTGTaGAGGCTCCGACGTCCTCACCCTCCAGCTCAGCTTGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SGRCRPRSRRSRCVL*RLRRPHPPAQLGSS
Trigger: ACTGCTGCCAAGCTGAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGCCGGCATCTTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp CACTCTCAGGAAGATGCCGGCCCCGGAGCCGCAGGAGTAGGTGTGTaGTGTGCAGGCTCCGACGTCCTCACCCTCCAGCTCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HSQEDAGPGAAGVGV*CAGSDVLTLQLSLA
Trigger: TGCCAAGCTGAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGCCGGCATCTTCCTGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp CACTTGAGGAAAGGCATGATGGCGGCCCGGACGCTCCTCCACAGGTaGCAGCCGGAGGGGGCTTCTTTCAAGGCACTTCCAGTATACTGG +
Preference number: 5 (lower is better)
Translates to: HLRKGMMAARTLLHR*QPEGASFKALPVYW
Trigger: CCAGTATACTGGAAGTGCCTTGAAAGAAGCCCCCTCCGGCTGGCACCTGTGGAGGAGCGTCCGGGCCGCCATCATGCCTTTCCTCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp GGAACCATGGTGGGACATGTCCTCCTGACAGGCCCCAGGGCTCCTTTTGGCCTCGCTTGTTCCAGAAACTaGAAGGTCTGGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: GTMVGHVLLTGPRAPFGLACSRN*KVWRGR
Trigger: CCGGCCCCTCCAGACCTTCAAGTTTCTGGAACAAGC...GAGGCCAAAAGGAGCCCTGGGGCCTGTCAGGAGGACATGTCCCACCATGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 90 bp GGTCATCAGGTTCTCTTCTGTGAGGAGCATTCGCGCCAGCGTCGGTaGGGTGAAGAACTGGACAGACAGAGCAGTCACCGACACTGCCCG +
Preference number: 5 (lower is better)
Translates to: GHQVLFCEEHSRQRR*GEELDRQSSHRHCP
Trigger: CGGGCAGTGTCGGTGACTGCTCTGTCTGTCCAGTTCTTCACCGCACCGACGCTGGCGCGAATGCTCCTCACAGAAGAGAACCTGATGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS TCA 90 bp AACCAAGTGGAAGATGTGCAGGTCCCCAGTGGCCAGGCTGCTTCCTaGAAAATCCTGACACTGCAGAGCTGGGAAAGCGAGCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: NQVEDVQVPSGQAAS*KILTLQSWESEHQA
Trigger: GGCCTGGTGCTCGCTTTCCCAGCTCTGCAGTGTCAGGATTTTTCAGGAAGCAGCCTGGCCACTGGGGACCTGCACATCTTCCACTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp CGTCGGTGCGGTGAAGAACTGGACAGACAGAGCAGTCACCGACACTaGCCGCTCGTGATCATCCTCCATAAAATCCCTCTGCAACTGCCG +
Preference number: 5 (lower is better)
Translates to: RRCGEELDRQSSHRH*PLVIILHKIPLQLP
Trigger: CGGCAGTTGCAGAGGGATTTTATGGAGGATGATCACGAGCGGGCAGTGTCGGTGACTGCTCTGTCTGTCCAGTTCTTCACCGCACCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGCATCCCCACCTGATCATGTCCTaGTGGGCTTCCAGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LTCFALEVRSSPRAEPHPHLIMS*WASREG
Trigger: CCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTG...GGGATGCGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 90 bp TTCCCCCACTTTAAACACTCGGCCACAGAGGTGAGAAGGCTTGTTTaGCTGCTCGAGCTTTGGAAATCCCAGCGCAGGGTCTTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: FPHFKHSATEVRRLV*LLELWKSQRRVFSA
Trigger: TGCGCTGAAGACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGTGTTTAAAGTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS-3UTR CAA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTCCATGCCGGTCTCCTaGTTCTCATCTTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVSMPVS*FSSSGR
Trigger: TCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS TCA 90 bp TCCGCGATGGTTTTCGTCCTGTCTTTTGACAGAACCGTTGACCTCTaGACAAACGCTGCCAAGACCATCGCCCTGCTTCCCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: SAMVFVLSFDRTVDL*TNAAKTIALLPTVT
Trigger: GGTGACTGTGGGAAGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 90 bp TCCACTGTGCCAGATCTGGTTGGTCTGAAAAATTTAACCTCCTGCTaGGGATGCTCCTGGGAGGAAGCAGCAGGGGGATCACCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: STVPDLVGLKNLTSC*GCSWEEAAGGSPCC
Trigger: GCAACACGGTGATCCCCCTGCTGCTTCCTCCCAGGAGCATCCTCAGCAGGAGGTTAAATTTTTCAGACCAACCAGATCTGGCACAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp GTCTGGTTAGCCTCCTGCGCGTGTCCGATCTCCTCTGTGATACTATaGTGCTGCCAGAGCTTCTGGATCTTTCGAAACCGCTCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VWLASCACPISSVIL*CCQSFWIFRNRSWH
Trigger: ATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 90 bp AGATTTTGGGCACACAGTGGGCTAAATGCTGGTACACTTCTCTGTTaGGGTCGGTTGCTTGCAGCCATCTCCCTGCGATCTCTTCGGCAG +
Preference number: 5 (lower is better)
Translates to: RFWAHSGLNAGTLLC*GRLLAAISLRSLRQ
Trigger: CTGCCGAAGAGATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGTGCCCAAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS-3UTR CAA 90 bp CCACAGTGTGAGGACTGCCATTCCCTGGGAAGTCACTGCCCAGACCCTGATGTTTCGCTGCTCCTTGGCTaGAACGGAATCAAAATACCT +
Preference number: 5 (lower is better)
Translates to: PQCEDCHSLGSHCPDPDVSLLLG*NGIKIP
Trigger: AGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCGA...AACATCAGGGTCTGGGCAGTGACTTCCCAGGGAATGGCAGTCCTCACACTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS TCA 90 bp GCCAAGACCATCGCCCTGCTTCCCACAGTCACCTCTTGCTCCTCTTaGCATAATATACAGGTGACAAACTGTCTCGGTTCAGGGACCTGT +
Preference number: 5 (lower is better)
Translates to: AKTIALLPTVTSCSS*HNIQVTNCLGSGTC
Trigger: ACAGGTCCCTGAACCGAGACAGTTTGTCACCTGTATATTATGTCAAGAGGAGCAAGAGGTGACTGTGGGAAGCAGGGCGATGGTCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 90 bp GTAACGCCACTGTCCAATGTGCTGCTGCAAACCGTGTTAACGACCTaGGACAGTCGTCCAGTCTACAAGGCAGAGGTCCAAAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: VTPLSNVLLQTVLTT*DSRPVYKAEVQKQA
Trigger: AGCCTGTTTTTGGACCTCTGCCTTGTAGACTGGACGACTGTCTCAGGTCGTTAACACGGTTTGCAGCAGCACATTGGACAGTGGCGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp TGGTTAGCCTCCTGCGCGTGTCCGATCTCCTCTGTGATACTATGCTaGTGCCAGAGCTTCTGGATCTTTCGAAACCGCTCTTGGCATAAA +
Preference number: 5 (lower is better)
Translates to: WLASCACPISSVILC*CQSFWIFRNRSWHK
Trigger: TTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 90 bp AAGCCCCCTCCTCCCGATGTGGTCATCCTATATCGATGGTCTCTATaGATACTTCCCAGGAAGCACTCCATGCATAAAACACAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KPPPPDVVILYRWSL*ILPRKHSMHKTQVG
Trigger: CCCCACCTGTGTTTTATGCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACCATCGATATAGGATGACCACATCGGGAGGAGGGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS-3UTR CAA 90 bp CCATCATGGAGACACCTGTCTGAAGCATCACTATGTCCTTGTCGAACATCTCTCGTTGAGGTCGGTTGCTaGCAGCCATCTCCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: PSWRHLSEASLCPCRTSLVEVGC*QPSPCD
Trigger: ATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAAC...GAGAGATGTTCGACAAGGACATAGTGATGCTTCAGACAGGTGTCTCCATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225599.2
CDS-3UTR CAA 90 bp GGCAGGGCAGGCAGCTCAAAACACTGCCTTCTGGATTTCGTTTGGTTTGAGACATGGTACACTTCTCTGTaGAGGTCGGTTGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: GRAGSSKHCLLDFVWFETWYTSL*RSVACS
Trigger: GCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCA...TGTCTCAAACCAAACGAAATCCAGAAGGCAGTGTTTTGAGCTGCCTGCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTCGTTTGGTTTGAGACAGGGTCTCCTCAAGTTACCCACGCTGGCCGCAAGCTTTCATCAGGAAGTGGTTaGGGTCCATCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: FVWFETGSPQVTHAGRKLSSGSG*GPSWRH
Trigger: GTGTCTCCATGATGGACCCAAACCACTTCCTGATGA...AAGCTTGCGGCCAGCGTGGGTAACTTGAGGAGACCCTGTCTCAAACCAAACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCTGGATAATCTCCCTCTaGATTTCATCTGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTWIISL*ISSVAA
Trigger: GGCTGCCACAGATGAAATCAAGAGGGAGATTATCCA...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CCCTTTCTGTTCCTGGAGACTGGAGTTCATCCCTCTGCTGAACCTGCTGTCACCCTTTGTCCTTGTCTCTaGAGCTCTCCTCCATTATGG +
Preference number: 5 (lower is better)
Translates to: PFLFLETGVHPSAEPAVTLCPCL*SSPPLW
Trigger: CCATAATGGAGGAGAGCTCAAGAGACAAGGACAAAG...GGTGACAGCAGGTTCAGCAGAGGGATGAACTCCAGTCTCCAGGAACAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 90 bp TCAGCAGCATTGTGCTTTCTCCTCAGCATCTGGACCACCTTTATCTaGTGTGTTACTGCTCTCGTCCACTGTGCCAGATCTGGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: SAALCFLLSIWTTFI*CVTALVHCARSGWS
Trigger: AGACCAACCAGATCTGGCACAGTGGACGAGAGCAGTAACACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 90 bp TTAGCCTCCTGCGCGTGTCCGATCTCCTCTGTGATACTATGCTGCTaGCAGAGCTTCTGGATCTTTCGAAACCGCTCTTGGCATAAATGT +
Preference number: 5 (lower is better)
Translates to: LASCACPISSVILCC*QSFWIFRNRSWHKC
Trigger: ACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTGTTGAGGTCGGTTGCTaGCAGCCATCTCCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: RGSLMVREAESPFLFLETVEVGC*QPSPCD
Trigger: ATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAAC...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACGTGAGCCCAGGTTTCTaGAAATGTGCAACGGACTCG +
Preference number: 5 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDVSPGF*KCATDS
Trigger: CGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCAC...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 90 bp TCCTATATCGATGGTCTCTATGGATACTTCCCAGGAAGCACTCCATaGATAAAACACAGGTGGGGTCAACTGCACAGTCTCTGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: SYIDGLYGYFPGSTP*IKHRWGQLHSLCRS
Trigger: ACTCCTGCAGAGACTGTGCAGTTGACCCCACCTGTGTTTTATGCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACCATCGATATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS CCA 90 bp TTTATCTGCTGTGTTACTGCTCTCGTCCACTGTGCCAGATCTGGTTaGTCTGAAAAATTTAACCTCCTGCTGAGGATGCTCCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: FICCVTALVHCARSG*SEKFNLLLRMLLGG
Trigger: TCCTCCCAGGAGCATCCTCAGCAGGAGGTTAAATTTTTCAGACCAACCAGATCTGGCACAGTGGACGAGAGCAGTAACACAGCAGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 90 bp ATACTATGCTGCTGCCAGAGCTTCTGGATCTTTCGAAACCGCTCTTaGCATAAATGTAAAGGATTTCCTCGTCTGAGTCCCTGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: ILCCCQSFWIFRNRS*HKCKGFPRLSPWSV
Trigger: GACCGACCAGGGACTCAGACGAGGAAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTCACCTGATCATGTCCTaGTGGGCTTCCAGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCHLIMS*WASREG
Trigger: CCCCTCCCTGGAAGCCCACAAGGACATGATCAGGTG...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AGAGGTTCTTTGATGGTTAGAGAAGCTGAAAGCCCCTTTCTGTTCCTGGAGACTCTCTCTGCTTTGTCCTaGTCTCTTGAGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGSLMVREAESPFLFLETLSALS*SLELSS
Trigger: GGAGGAGAGCTCAAGAGACAAGGACAAAGCAGAGAG...AGTCTCCAGGAACAGAAAGGGGCTTTCAGCTTCTCTAACCATCAAAGAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 90 bp TTCATGGCTTCTGTGTCCTCTGAAGAAGACGTGTCAGCAGCATTGTaGTTTCTCCTCAGCATCTGGACCACCTTTATCTGCTGTGTTACT +
Preference number: 5 (lower is better)
Translates to: FMASVSSEEDVSAAL*FLLSIWTTFICCVT
Trigger: AGTAACACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACAGAAGCCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 90 bp GCACGAGAAATTGGATGCTTGGTTAATGAGGCTGCTGTAATCCTCTaGAAGGTCTATCAGTTTGTTAGCTCCTCTGGGGTAGCTTATCGC +
Preference number: 5 (lower is better)
Translates to: AREIGCLVNEAAVIL*KVYQFVSSSGVAYR
Trigger: GCGATAAGCTACCCCAGAGGAGCTAACAAACTGATAGACCTTCCAGAGGATTACAGCAGCCTCATTAACCAAGCATCCAATTTCTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 90 bp GCGTGTCCGATCTCCTCTGTGATACTATGCTGCTGCCAGAGCTTCTaGATCTTTCGAAACCGCTCTTGGCATAAATGTAAAGGATTTCCT +
Preference number: 5 (lower is better)
Translates to: ACPISSVILCCCQSF*IFRNRSWHKCKGFP
Trigger: AGGAAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTGCTTGTTCCAGAAACTaGAAGGTCTGGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSACSRN*KVWRGR
Trigger: CCGGCCCCTCCAGACCTTCAAGTTTCTGGAACAAGC...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGTTGAGGTCGGTTGCTaGCAGCCATCTCCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSVEVGC*QPSPCD
Trigger: ATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAAC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TCCTGGAGACTGTGCTACCTGCATTTCTTTGAGCCTCTGGTCTGGATTTCTGACAAGGGTATAAATGACTaGCTCATAGGTGTGAACCTC +
Preference number: 5 (lower is better)
Translates to: SWRLCYLHFFEPLVWISDKGIND*LIGVNL
Trigger: GAGGTTCACACCTATGAGCAAGTCATTTATACCCTT...GTCAGAAATCCAGACCAGAGGCTCAAAGAAATGCAGGTAGCACAGTCTCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTGTCCAACCCCAGGGTaGAATCTTTCTCCCACAAGC +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNCPTPG*NLSPTS
Trigger: GCTTGTGGGAGAAAGATTCAACCCTGGGGTTGGACA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCATGCCGGTCTCCTaGTTCTCATCTTCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNSMPVS*FSSSGR
Trigger: TCTGCCTGAAGATGAGAACAAGGAGACCGGCATGGA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACGTGAGCCCAGGTTTCTaGAAATGTGCAACGGACTCG +
Preference number: 5 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYVSPGF*KCATDS
Trigger: CGAGTCCGTTGCACATTTCAAGAAACCTGGGCTCAC...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACCTCTCTGCTTTGTCCTaGTCTCTTGAGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYLSALS*SLELSS
Trigger: GGAGGAGAGCTCAAGAGACAAGGACAAAGCAGAGAG...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAAAAAGAACAGGCGTTTGTGTGCACAGGCTGAGGAATGTCCTAGATCAACCAACAAAGCAGAGCACTaGAGGAAAGGCATGATGGCG +
Preference number: 5 (lower is better)
Translates to: NKKNRRLCAQAEECPRSTNKAEH*RKGMMA
Trigger: CGCCATCATGCCTTTCCTCAAGTGCTCTGCTTTGTT...GGTTGATCTAGGACATTCCTCAGCCTGTGCACACAAACGCCTGTTCTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTACAGGTTGAACTCTTaGGCACACTCTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNYRLNS*AHSGFS
Trigger: GCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTA...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTGACGTGTCAGCAGCATaGTGCTTTCTCCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSDVSAA*CFLLSI
Trigger: GATGCTGAGGAGAAAGCACAATGCTGCTGACACGTC...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTTTGGTACACTTCTCTGTaGAGGTCGGTTGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLSFWKSQLCYKTPSQVFWYTSL*RSVACS
Trigger: GCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCA...AAAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATGGATAATCTCCCTCTaGATTTCATCTGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: DSAELISCCLSGKASCVTWIISL*ISSVAA
Trigger: GGCTGCCACAGATGAAATCAAGAGGGAGATTATCCA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAGGTTGAACTCTTaGGCACACTCTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCYRLNS*AHSGFS
Trigger: GCTGAAGCCAGAGTGTGCCAAAGAGTTCAACCTGTA...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACATCGCTGCTCCTTGGCTaGAACGGAATCAAAATACCT +
Preference number: 5 (lower is better)
Translates to: DSAELISCCLSGKASCVTSLLLG*NGIKIP
Trigger: AGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCGA...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGACGTGTCAGCAGCATaGTGCTTTCTCCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKDVSAA*CFLLSI
Trigger: GATGCTGAGGAGAAAGCACAATGCTGCTGACACGTC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAACCCAGTGGGATTCTCTaGATCCATGCCATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQPSGIL*IHAILF
Trigger: GAAGAGAATGGCATGGATCAAGAGAATCCCACTGGG...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTAACAAAGCAGAGCACTaGAGGAAAGGCATGATGGCG +
Preference number: 5 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFNKAEH*RKGMMA
Trigger: CGCCATCATGCCTTTCCTCAAGTGCTCTGCTTTGTT...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTCAAATTGACTTGCTTTGCTCTGGAGGTGAGGTCTAGTCCCAGAGCTGAACCGGATGTCACTGTTTTCTaGAAAAAGGTGAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: FKLTCFALEVRSSPRAEPDVTVF*KKVNEV
Trigger: AACCTCATTCACCTTTTTCAAGAAAACAGTGACATC...CGGTTCAGCTCTGGGACTAGACCTCACCTCCAGAGCAAAGCAAGTCAATTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAACAGCTTCTTATACTaGAGGTCCATGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LISCCLSGKASCVTKLQVNSFLY*RSMSRL
Trigger: CAGCCTGCTCATGGACCTCAAGTATAAGAAGCTGTT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCATCATCAGGAAGTGGTTaGGGTCCATCATGGAGACAC +
Preference number: 5 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSSSGSG*GPSWRH
Trigger: GTGTCTCCATGATGGACCCAAACCACTTCCTGATGA...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTCTTTGTCCTTGTCTCTaGAGCTCTCCTCCATTATGG +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCLCPCL*SSPPLW
Trigger: CCATAATGGAGGAGAGCTCAAGAGACAAGGACAAAG...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCACCCAGTGGGATTCTCTaGATCCATGCCATTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSPSGIL*IHAILF
Trigger: GAAGAGAATGGCATGGATCAAGAGAATCCCACTGGG...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACGACCACTCCGTTGGTTaGCTAATCAATACATACTTG +
Preference number: 5 (lower is better)
Translates to: RFSRTYFLLSFWKSQLCYDHSVG*LINTYL
Trigger: CAAGTATGTATTGATTAGCAAACCAACGGAGTGGTC...GTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp ATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAATGCTGGAAGAGCTCTTaGTTTTCGTCAATGAAGTGC +
Preference number: 5 (lower is better)
Translates to: IQPNLFPVVFLEKPAVLQCWKSS*FSSMKC
Trigger: GCACTTCATTGACGAAAACAAAGAGCTCTTCCAGCA...TTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTGCTGGAAGAGCTCTTaGTTTTCGTCAATGAAGTGC +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCCWKSS*FSSMKC
Trigger: GCACTTCATTGACGAAAACAAAGAGCTCTTCCAGCA...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACGGAATCAAAATACCTTaGCCAACAATGGGCATGCAT +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNGIKIP*PTMGMH
Trigger: ATGCATGCCCATTGTTGGCAAAGGTATTTTGATTCC...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTCGAGAAATTGGATGCTaGGTTAATGAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSREIGC*VNEAAV
Trigger: TACAGCAGCCTCATTAACCAAGCATCCAATTTCTCG...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGGGTATAAATGACTaGCTCATAGGTGTGAACCTC +
Preference number: 5 (lower is better)
Translates to: LISCCLSGKASCVTKLQVKGIND*LIGVNL
Trigger: GAGGTTCACACCTATGAGCAAGTCATTTATACCCTT...GACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp GATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAATGACTGTCTTTGCTaGATCACAGTACTGGAAATC +
Preference number: 5 (lower is better)
Translates to: DSAELISCCLSGKASCVTNDCLC*ITVLEI
Trigger: GATTTCCAGTACTGTGATCAAGCAAAGACAGTCATT...TGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGCGAGAAATTGGATGCTaGGTTAATGAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKREIGC*VNEAAV
Trigger: TACAGCAGCCTCATTAACCAAGCATCCAATTTCTCG...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACAAACATCCTTTGGTTTaGCCAGCTAAAAATAGCACC +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNKHPLV*PAKNST
Trigger: GGTGCTATTTTTAGCTGGCAAAACCAAAGGATGTTT...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTAATGACTGTCTTTGCTaGATCACAGTACTGGAAATC +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCNDCLC*ITVLEI
Trigger: GATTTCCAGTACTGTGATCAAGCAAAGACAGTCATT...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AATAGATTCAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTGCCCCTTTCCATAATTaGGAATCATTAAGCATCAGT +
Preference number: 5 (lower is better)
Translates to: NRFSRTYFLLSFWKSQLCAPFHN*ESLSIS
Trigger: ACTGATGCTTAATGATTCCAAATTATGGAAAGGGGC...ACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTGAATCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CAGCCGAACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACCTAATCAATACATACTaGAGATCTAAGATGAGGCTC +
Preference number: 5 (lower is better)
Translates to: QPNLFPVVFLEKPAVLQNLINTY*RSKMRL
Trigger: GAGCCTCATCTTAGATCTCAAGTATGTATTGATTAG...GTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTTCGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGGAATCAAAATACCTTaGCCAACAATGGGCATGCAT +
Preference number: 5 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSGIKIP*PTMGMH
Trigger: ATGCATGCCCATTGTTGGCAAAGGTATTTTGATTCC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp CCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTTTTAAACATCCTTTGGTTTaGCCAGCTAAAAATAGCACC +
Preference number: 5 (lower is better)
Translates to: PVVFLEKPAVLQNSKSSFKHPLV*PAKNST
Trigger: GGTGCTATTTTTAGCTGGCAAAACCAAAGGATGTTT...AAAACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAGCCCCTTTCCATAATTaGGAATCATTAAGCATCAGT +
Preference number: 5 (lower is better)
Translates to: LFPVVFLEKPAVLQNSKSAPFHN*ESLSIS
Trigger: ACTGATGCTTAATGATTCCAAATTATGGAAAGGGGC...TGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp TTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGTCAAGTCTAATCAATACATACTaGAGATCTAAGATGAGGCTC +
Preference number: 5 (lower is better)
Translates to: FPVVFLEKPAVLQNSKSSLINTY*RSKMRL
Trigger: GAGCCTCATCTTAGATCTCAAGTATGTATTGATTAG...ACTTGACTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS-3UTR CAA 90 bp AACTTATTTCCTGTTGTCTTTCTGGAAAAGCCAGCTGTGTTACAAAACTCCAAGGATGTCACTGTTTTCTaGAAAAAGGTGAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: NLFPVVFLEKPAVLQNSKDVTVF*KKVNEV
Trigger: AACCTCATTCACCTTTTTCAAGAAAACAGTGACATC...CTTGGAGTTTTGTAACACAGCTGGCTTTTCCAGAAAGACAACAGGAAATAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TGCCGGCCCCGGAGCCGCAGGAGTAGGTGTGTGCTGTaGAGGCTCCGACGTCCTCACCCTCCAGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: CRPRSRRSRCVL*RLRRPHPPAQL
Trigger: AAGCTGAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp GAAGATGCCGGCCCCGGAGCCGCAGGAGTAGGTGTGTaGTGTGCAGGCTCCGACGTCCTCACCCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: EDAGPGAAGVGV*CAGSDVLTLQL
Trigger: GAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACCTACTCCTGCGGCTCCGGGGCCGGCATCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp AAAGGCATGATGGCGGCCCGGACGCTCCTCCACAGGTaGCAGCCGGAGGGGGCTTCTTTCAAGGCACTTCCA +
Preference number: 6 (lower is better)
Translates to: KGMMAARTLLHR*QPEGASFKALP
Trigger: TGGAAGTGCCTTGAAAGAAGCCCCCTCCGGCTGGCACCTGTGGAGGAGCGTCCGGGCCGCCATCATGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp AGGAGCATTCGCGCCAGCGTCGGTGCGGTGAAGAACTaGACAGACAGAGCAGTCACCGACACTGCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: RSIRASVGAVKN*TDRAVTDTARS
Trigger: CGAGCGGGCAGTGTCGGTGACTGCTCTGTCTGTCCAGTTCTTCACCGCACCGACGCTGGCGCGAATGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS CAA 72 bp ATGCTCCTGGGAGGAAGCAGCAGGGGGATCACCGTGTaGCTCAGGCACTCACAGAGCGGGCAGAGGAACTCG +
Preference number: 6 (lower is better)
Translates to: MLLGGSSRGITV*LRHSQSGQRNS
Trigger: CGAGTTCCTCTGCCCGCTCTGTGAGTGCCTGAGCAACACGGTGATCCCCCTGCTGCTTCCTCCCAGGAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp CTGCTGAGGATGCTCCTGGGAGGAAGCAGCAGGGGGATCACCGTGTaGCTCAGGCACTCACAGAGCGGGCAGAGGAACTCGCCATTCTCT +
Preference number: 6 (lower is better)
Translates to: LLRMLLGGSSRGITV*LRHSQSGQRNSPFS
Trigger: AGAGAATGGCGAGTTCCTCTGCCCGCTCTGTGAGTGCCTGAGCAACACGGTGATCCCCCTGCTGCTTCCTCCCAGGAGCATCCTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp GGTGTGTGCTGTGCAGGCTCCGACGTCCTCACCCTCCAGCTCAGCTaGGCAGCAGTAACTCTGAGAGCAGAGGAGACTCCCACACACGAG +
Preference number: 6 (lower is better)
Translates to: GVCCAGSDVLTLQLS*AAVTLRAEETPTHE
Trigger: CTCGTGTGTGGGAGTCTCCTCTGCTCTCAGAGTTACTGCTGCCAAGCTGAGCTGGAGGGTGAGGACGTCGGAGCCTGCACAGCACACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp TGTCTGTGCTGGGCCCAGTGCTGTAAGAGCTGCGTCTaGAACGGGAGGGCTGCTGTCAAGAGTGGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CLCWAQCCKSCV*NGRAAVKSGRG
Trigger: GCCTCTGCCACTCTTGACAGCAGCCCTCCCGTTTCAGACGCAGCTCTTACAGCACTGGGCCCAGCACAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TCCCTGCGATCTCTTCGGCAGAACATTCCAGCAAACTaGGGTCGATGGCCTGCACCTCGGGCTCCATCTCCG +
Preference number: 6 (lower is better)
Translates to: SLRSLRQNIPAN*GRWPAPRAPSP
Trigger: CGGAGATGGAGCCCGAGGTGCAGGCCATCGACCGCAGTTTGCTGGAATGTTCTGCCGAAGAGATCGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS GCA 72 bp GATGTACCACTCCATCGGTCCCAGCAGGATGTGCTGTaGCAGCGTGTCTTCCTTCTGAGGGAAGGGGTTAGG +
Preference number: 6 (lower is better)
Translates to: DVPLHRSQQDVL*QRVFLLREGVR
Trigger: CCTAACCCCTTCCCTCAGAAGGAAGACACGCTGGCACAGCACATCCTGCTGGGACCGATGGAGTGGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS GCA 72 bp GTTCTCTTCTGTGAGGAGCATTCGCGCCAGCGTCGGTaGGGTGAAGAACTGGACAGACAGAGCAGTCACCGA +
Preference number: 6 (lower is better)
Translates to: VLFCEEHSRQRR*GEELDRQSSHR
Trigger: TCGGTGACTGCTCTGTCTGTCCAGTTCTTCACCGCACCGACGCTGGCGCGAATGCTCCTCACAGAAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS TCA 72 bp TGGACAGACAGAGCAGTCACCGACACTGCCCGCTCGTaGTCATCCTCCATAAAATCCCTCTGCAACTGCCGG +
Preference number: 6 (lower is better)
Translates to: WTDRAVTDTARS*SSSIKSLCNCR
Trigger: CCGGCAGTTGCAGAGGGATTTTATGGAGGATGATCACGAGCGGGCAGTGTCGGTGACTGCTCTGTCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS GCA 72 bp GCCTCCTGCGCGTGTCCGATCTCCTCTGTGATACTATaGTGCTGCCAGAGCTTCTGGATCTTTCGAAACCGC +
Preference number: 6 (lower is better)
Translates to: ASCACPISSVIL*CCQSFWIFRNR
Trigger: GCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TGCCAGTCAATTCCGACCAGGGTCTGGTTAGCCTCCTaGGCGTGTCCGATCTCCTCTGTGATACTATGCTGC +
Preference number: 6 (lower is better)
Translates to: CQSIPTRVWLAS*ACPISSVILCC
Trigger: GCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGAGGCTAACCAGACCCTGGTCGGAATTGACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp GCAGAGGCAGAGGTGTCCAGCTCTAGGGTCTGCTGGAAGAGCTCTTaGTTTTCGTCAATGAAGTGCCGCTGCATCTCAGACATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AEAEVSSSRVCWKSS*FSSMKCRCISDIWA
Trigger: GGCCCAGATGTCTGAGATGCAGCGGCACTTCATTGACGAAAACAAAGAGCTCTTCCAGCAGACCCTAGAGCTGGACACCTCTGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp AGAGCTGGGAAAGCGAGCACCAGGCCCACCAGCAAGTaGAACATGTCGATGTCTAGTATGCACGGGAGGTCT +
Preference number: 6 (lower is better)
Translates to: RAGKASTRPTSK*NMSMSSMHGRS
Trigger: AGACCTCCCGTGCATACTAGACATCGACATGTTTCACTTGCTGGTGGGCCTGGTGCTCGCTTTCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 72 bp CACAGAGGTGAGAAGGCTTGTTTGCCTGCTCGAGCTTaGGAAATCCCAGCGCAGGGTCTTCAGCGCAGATGT +
Preference number: 6 (lower is better)
Translates to: HRGEKACLPARA*EIPAQGLQRRC
Trigger: ACATCTGCGCTGAAGACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS CAA 72 bp CAAGCGCAGCCGCTGCTGCCTTCGCTGCTCCTTGGCTaGAACGGAATCAAAATACCTTTGCCAACAATGGGC +
Preference number: 6 (lower is better)
Translates to: QAQPLLPSLLLG*NGIKIPLPTMG
Trigger: GCCCATTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCGAAGGCAGCAGCGGCTGCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 72 bp CTCCCACACACGAGGCACAGAGTAGGAGCTCTGCTCTaGTCGCCACCTGATTTGGGGCACGAGAAATTGGAT +
Preference number: 6 (lower is better)
Translates to: LPHTRHRVGALL*SPPDLGHEKLD
Trigger: ATCCAATTTCTCGTGCCCCAAATCAGGTGGCGACAAGAGCAGAGCTCCTACTCTGTGCCTCGTGTGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp CAGAGGAGACTCCCACACACGAGGCACAGAGTAGGAGCTCTGCTCTaGTCGCCACCTGATTTGGGGCACGAGAAATTGGATGCTTGGTTA +
Preference number: 6 (lower is better)
Translates to: QRRLPHTRHRVGALL*SPPDLGHEKLDAWL
Trigger: TAACCAAGCATCCAATTTCTCGTGCCCCAAATCAGGTGGCGACAAGAGCAGAGCTCCTACTCTGTGCCTCGTGTGTGGGAGTCTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp GCACACAGTGGGCTAAATGCTGGTACACTTCTCTGTTaGGGTCGGTTGCTTGCAGCCATCTCCCTGCGATCT +
Preference number: 6 (lower is better)
Translates to: AHSGLNAGTLLC*GRLLAAISLRS
Trigger: AGATCGCAGGGAGATGGCTGCAAGCAACCGACCTCAACAGAGAAGTGTACCAGCATTTAGCCCACTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS TCA 72 bp AAGCGCAGCCGCTGCTGCCTTCGCTGCTCCTTGGCTTaGACGGAATCAAAATACCTTTGCCAACAATGGGCA +
Preference number: 6 (lower is better)
Translates to: KRSRCCLRCSLA*TESKYLCQQWA
Trigger: TGCCCATTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCCAAGGAGCAGCGAAGGCAGCAGCGGCTGCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TTTAAACACTCGGCCACAGAGGTGAGAAGGCTTGTTTaGCTGCTCGAGCTTTGGAAATCCCAGCGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: FKHSATEVRRLV*LLELWKSQRRV
Trigger: GACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGTGTTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS GCA 72 bp TGCGCGTGTCCGATCTCCTCTGTGATACTATGCTGCTaGCAGAGCTTCTGGATCTTTCGAAACCGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: CACPISSVILCC*QSFWIFRNRSW
Trigger: CCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TCCTGCGCGTGTCCGATCTCCTCTGTGATACTATGCTaGTGCCAGAGCTTCTGGATCTTTCGAAACCGCTCT +
Preference number: 6 (lower is better)
Translates to: SCACPISSVILC*CQSFWIFRNRS
Trigger: AGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGATCGGACACGCGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp GGTGAAGAACTGGACAGACAGAGCAGTCACCGACACTaGCCGCTCGTGATCATCCTCCATAAAATCCCTCTG +
Preference number: 6 (lower is better)
Translates to: GEELDRQSSHRH*PLVIILHKIPL
Trigger: CAGAGGGATTTTATGGAGGATGATCACGAGCGGGCAGTGTCGGTGACTGCTCTGTCTGTCCAGTTCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113337.10
CDS CCA 72 bp ACAGAGGTGAGAAGGCTTGTTTGCCTGCTCGAGCTTTaGAAATCCCAGCGCAGGGTCTTCAGCGCAGATGTA +
Preference number: 6 (lower is better)
Translates to: TEVRRLVCLLEL*KSQRRVFSADV
Trigger: TACATCTGCGCTGAAGACCCTGCGCTGGGATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS CAA 72 bp CCGCGATGGTTTTCGTCCTGTCTTTTGACAGAACCGTaGACCTCTGAACAAACGCTGCCAAGACCATCGCCC +
Preference number: 6 (lower is better)
Translates to: PRWFSSCLLTEP*TSEQTLPRPSP
Trigger: GGGCGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp TTTCTGGGTCCGCGATGGTTTTCGTCCTGTCTTTTGACAGAACCGTaGACCTCTGAACAAACGCTGCCAAGACCATCGCCCTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: FLGPRWFSSCLLTEP*TSEQTLPRPSPCFP
Trigger: TGGGAAGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGACCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp GTTTTCGTCCTGTCTTTTGACAGAACCGTTGACCTCTaGACAAACGCTGCCAAGACCATCGCCCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: VFVLSFDRTVDL*TNAAKTIALLP
Trigger: GGGAAGCAGGGCGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp CTGTCCAATGTGCTGCTGCAAACCGTGTTAACGACCTaGGACAGTCGTCCAGTCTACAAGGCAGAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: LSNVLLQTVLTT*DSRPVYKAEVQ
Trigger: TTGGACCTCTGCCTTGTAGACTGGACGACTGTCTCAGGTCGTTAACACGGTTTGCAGCAGCACATTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp ATCACTCAAAATTCTTTCTATGCTCTGGATGGTGTATaGACAGGTCCCCCAGCACAGGATGGGCACACGGGG +
Preference number: 6 (lower is better)
Translates to: ITQNSFYALDGV*TGPPAQDGHTG
Trigger: CCCCGTGTGCCCATCCTGTGCTGGGGGACCTGTGCATACACCATCCAGAGCATAGAAAGAATTTTGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp GTAGGTTCCCCCACTTTAAACACTCGGCCACAGAGGTaGGAAGGCTTGTTTGCCTGCTCGAGCTTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: VGSPTLNTRPQR*EGLFACSSFGN
Trigger: ATTTCCAAAGCTCGAGCAGGCAAACAAGCCTTCTCACCTCTGTGGCCGAGTGTTTAAAGTGGGGGAACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS TCA 72 bp GAGGCACAGAGTAGGAGCTCTGCTCTTGTCGCCACCTaGTTTGGGGCACGAGAAATTGGATGCTTGGTTAAT +
Preference number: 6 (lower is better)
Translates to: EAQSRSSALVAT*FGAREIGCLVN
Trigger: ATTAACCAAGCATCCAATTTCTCGTGCCCCAAATCAGGTGGCGACAAGAGCAGAGCTCCTACTCTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp GACGTGTCAGCAGCATTGTGCTTTCTCCTCAGCATCTaGACCACCTTTATCTGCTGTGTTACTGCTCTCGTC +
Preference number: 6 (lower is better)
Translates to: DVSAALCFLLSI*TTFICCVTALV
Trigger: GACGAGAGCAGTAACACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TCAAAATACCTTTGCCAACAATGGGCATGCATAACGTaGCCACAGCTGCCAGTGTGTGTCCCACAAGACAGA +
Preference number: 6 (lower is better)
Translates to: SKYLCQQWACIT*PQLPVCVPQDR
Trigger: TCTGTCTTGTGGGACACACACTGGCAGCTGTGGGCACGTTATGCATGCCCATTGTTGGCAAAGGTATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TTGTGCTTTCTCCTCAGCATCTGGACCACCTTTATCTaGTGTGTTACTGCTCTCGTCCACTGTGCCAGATCT +
Preference number: 6 (lower is better)
Translates to: LCFLLSIWTTFI*CVTALVHCARS
Trigger: AGATCTGGCACAGTGGACGAGAGCAGTAACACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS GCA 72 bp TCTGTGTCCTCTGAAGAAGACGTGTCAGCAGCATTGTaGTTTCTCCTCAGCATCTGGACCACCTTTATCTGC +
Preference number: 6 (lower is better)
Translates to: SVSSEEDVSAAL*FLLSIWTTFIC
Trigger: GCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp TCTCCTCATCACTCAAAATTCTTTCTATGCTCTGGATaGTGTATGCACAGGTCCCCCAGCACAGGATGGGCA +
Preference number: 6 (lower is better)
Translates to: SPHHSKFFLCSG*CMHRSPSTGWA
Trigger: TGCCCATCCTGTGCTGGGGGACCTGTGCATACACCATCCAGAGCATAGAAAGAATTTTGAGTGATGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 72 bp GCTTCTGTGTCCTCTGAAGAAGACGTGTCAGCAGCATaGTGCTTTCTCCTCAGCATCTGGACCACCTTTATC +
Preference number: 6 (lower is better)
Translates to: ASVSSEEDVSAA*CFLLSIWTTFI
Trigger: GATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp TGTGTTACTGCTCTCGTCCACTGTGCCAGATCTGGTTaGTCTGAAAAATTTAACCTCCTGCTGAGGATGCTC +
Preference number: 6 (lower is better)
Translates to: CVTALVHCARSG*SEKFNLLLRML
Trigger: GAGCATCCTCAGCAGGAGGTTAAATTTTTCAGACCAACCAGATCTGGCACAGTGGACGAGAGCAGTAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp TGCTGCCAGAGCTTCTGGATCTTTCGAAACCGCTCTTaGCATAAATGTAAAGGATTTCCTCGTCTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: CCQSFWIFRNRS*HKCKGFPRLSP
Trigger: GGGACTCAGACGAGGAAATCCTTTACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 72 bp ATTTTTCTGGGTCCGCGATGGTTTTCGTCCTGTCTTTaGACAGAACCGTTGACCTCTGAACAAACGCTGCCA +
Preference number: 6 (lower is better)
Translates to: IFLGPRWFSSCL*TEPLTSEQTLP
Trigger: TGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGACCCAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp ATGGATCATATTTTTCTGGGTCCGCGATGGTTTTCGTCCTGTCTTTaGACAGAACCGTTGACCTCTGAACAAACGCTGCCAAGACCATCG +
Preference number: 6 (lower is better)
Translates to: MDHIFLGPRWFSSCL*TEPLTSEQTLPRPS
Trigger: CGATGGTCTTGGCAGCGTTTGTTCAGAGGTCAACGGTTCTGTCAAAAGACAGGACGAAAACCATCGCGGACCCAGAAAAATATGATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp ATATTCATGGCTTCTGTGTCCTCTGAAGAAGACGTGTCAGCAGCATaGTGCTTTCTCCTCAGCATCTGGACCACCTTTATCTGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: IFMASVSSEEDVSAA*CFLLSIWTTFICCV
Trigger: AACACAGCAGATAAAGGTGGTCCAGATGCTGAGGAGAAAGCACAATGCTGCTGACACGTCTTCTTCAGAGGACACAGAAGCCATGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CAA 90 bp GGTTGGTTGGTAGGGAAAGGTAGTTACATAAGTGTTCAAAATGGCTaGTTCCAGAAACTTGAAGGTCTGGAGGGGCCGGGACTCCATTTA +
Preference number: 6 (lower is better)
Translates to: GWLVGKGSYISVQNG*FQKLEGLEGPGLHL
Trigger: TAAATGGAGTCCCGGCCCCTCCAGACCTTCAAGTTTCTGGAACAAGCCATTTTGAACACTTATGTAACTACCTTTCCCTACCAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp CCTCCCGATGTGGTCATCCTATATCGATGGTCTCTATaGATACTTCCCAGGAAGCACTCCATGCATAAAACA +
Preference number: 6 (lower is better)
Translates to: PPDVVILYRWSL*ILPRKHSMHKT
Trigger: TGTTTTATGCATGGAGTGCTTCCTGGGAAGTATCCATAGAGACCATCGATATAGGATGACCACATCGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
ENSMUST00000225599.2
CDS CCA 72 bp TGTGCAAAGAGAGAATGGCCAGTTCTTCTTCCCCAGTaGGATTCTCTTGATCCATGCCATTCTCTTCTGTAC +
Preference number: 6 (lower is better)
Translates to: CAKREWPVLLPQ*DSLDPCHSLLY
Trigger: GTACAGAAGAGAATGGCATGGATCAAGAGAATCCCACTGGGGAAGAAGAACTGGCCATTCTCTCTTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS TCA 72 bp AGAATGGCCAGTTCTTCTTCCCCAGTGGGATTCTCTTaGTCCATGCCATTCTCTTCTGTACATGAGGTAAGT +
Preference number: 6 (lower is better)
Translates to: RMASSSSPVGFS*SMPFSSVHEVS
Trigger: ACTTACCTCATGTACAGAAGAGAATGGCATGGATCAAGAGAATCCCACTGGGGAAGAAGAACTGGCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp ATTGGATGCTTGGTTAATGAGGCTGCTGTAATCCTCTaGAAGGTCTATCAGTTTGTTAGCTCCTCTGGGGTA +
Preference number: 6 (lower is better)
Translates to: IGCLVNEAAVIL*KVYQFVSSSGV
Trigger: TACCCCAGAGGAGCTAACAAACTGATAGACCTTCCAGAGGATTACAGCAGCCTCATTAACCAAGCATCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10
CDS CCA 72 bp ATCTCCTCTGTGATACTATGCTGCTGCCAGAGCTTCTaGATCTTTCGAAACCGCTCTTGGCATAAATGTAAA +
Preference number: 6 (lower is better)
Translates to: ISSVILCCCQSF*IFRNRSWHKCK
Trigger: TTTACATTTATGCCAAGAGCGGTTTCGAAAGATCCAGAAGCTCTGGCAGCAGCATAGTATCACAGAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113335.4
ENSMUST00000113337.10