Pregenerated sensors for UBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027272Ensembl transcript IDs: ENSMUST00000028728.6
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGTAAAGCCAAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTaGATTATTTATACGCAAGATGGCTCAACCACAGCAGGTTATAAC | + |
Preference number: 1 (lower is better) Translates to: GKAKNQEVYAQTQES*IIYTQDGSTTAGYN Trigger: GTTATAACCTGCTGTGGTTGAGCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTTGGCTTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR TCA 90 bp | GCACAGCTAGCACTCTCCATAGAGAGATTTAGATCTGTTTCTGACTaGAGCCGTAGGTGGTACAATAAGGATATTTCCTTAAAGAAGAAA | + |
Preference number: 1 (lower is better) Translates to: AQLALSIERFRSVSD*SRRWYNKDISLKKK Trigger: TTTCTTCTTTAAGGAAATATCCTTATTGTACCACCTACGGCTTCAGTCAGAAACAGATCTAAATCTCTCTATGGAGAGTGCTAGCTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR GCA 90 bp | GTAGTATTTATCCAAGTAGGAAATCATGATTGTGAGTCTGGTGCCTaGTCACACCAATTTCTTACTGCAAAACCCACTTTTCATTCCATA | + |
Preference number: 1 (lower is better) Translates to: VVFIQVGNHDCESGA*SHQFLTAKPTFHSI Trigger: TATGGAATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACAATCATGATTTCCTACTTGGATAAATACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAACTGATGGAGAACTTGTaGCTCCACAGAGCTCCCTGG | + |
Preference number: 2 (lower is better) Translates to: KNQEVYAQTQESCIIYTQLMENL*LHRAPW Trigger: CCAGGGAGCTCTGTGGAGTCACAAGTTCTCCATCAG...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTGAATCAAGAGGTCTATaGACAGACTCAGGAGAGCTG | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLAESRGL*TDSGEL Trigger: CAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTC...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCATGAGCACATTCTCCTaGATCTACTTGAGGTCTATA | + |
Preference number: 2 (lower is better) Translates to: QEVYAQTQESCIIYTQDGMSTFS*IYLRSI Trigger: TATAGACCTCAAGTAGATTCAGGAGAATGTGCTCAT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATACTGGGGCAATTTTCTaGTTCCCATTCTACAAAGAG | + |
Preference number: 2 (lower is better) Translates to: CESGACSHQFLTAKPTFHTGAIF*FPFYKE Trigger: CTCTTTGTAGAATGGGAATCAGAAAATTGCCCCAGT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCTTATGACCATTCACTaGGGCAATTTTCTGATTCCC | + |
Preference number: 2 (lower is better) Translates to: CESGACSHQFLTAKPTFHLMTIH*GNFLIP Trigger: GGGAATCAGAAAATTGCCCCAGTGAATGGTCATAAG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTCTCCTGAATCTACTTaGGGTCTATACTGGAAGGAT | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLASPEST*GLYWKD Trigger: ATCCTTCCAGTATAGACCTCAAGTAGATTCAGGAGA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCTTAAGAAATGTAACTaGTGGAGAACTTGTGACTCC | + |
Preference number: 2 (lower is better) Translates to: CESGACSHQFLTAKPTFHLKKCN*WRTCDS Trigger: GGAGTCACAAGTTCTCCATCAGTTACATTTCTTAAG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTCAAGCCATAGAAGGTTaGAGAACTGGCTTAAATACA | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLAQAIEG*RTGLNT Trigger: TGTATTTAAGCCAGTTCTGCAACCTTCTATGGCTTG...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTCAGACTCAGGAGAGCTaGATTATTTATACGCAAGAT | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLAQTQES*IIYTQD Trigger: ATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTG...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGAGATGTTAGCCAGATaGAGAAATGTCCACAAATGC | + |
Preference number: 2 (lower is better) Translates to: KNQEVYAQTQESCIIYTQEMLAR*RNVHKC Trigger: GCATTTGTGGACATTTCTCCATCTGGCTAACATCTC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR CCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTATTTATACGCAAGATaGCTCAACCACAGCAGGTTA | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLAYLYAR*LNHSRL Trigger: TAACCTGCTGTGGTTGAGCCATCTTGCGTATAAATA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATTGTATTTTTACTTCCTaGTCTTCACTAAACAGAAGG | + |
Preference number: 2 (lower is better) Translates to: CESGACSHQFLTAKPTFHCIFTS*SSLNRR Trigger: CCTTCTGTTTAGTGAAGACCAGGAAGTAAAAATACA...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTAACACATCTTTCAACTaGAATATTACCCAATACCAC | + |
Preference number: 2 (lower is better) Translates to: QKLPSQEAELSDELGSLANTSFN*NITQYH Trigger: GTGGTATTGGGTAATATTGCAGTTGAAAGATGTGTT...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR CAA 90 bp | CCTAGACATCAAATCAAGGACCTGTTTCTTACAAGCCATAGAAGGTaGCAGAACTGGCTTAAATACAGTGTTCTAATTTCATCTCTTATG | + |
Preference number: 2 (lower is better) Translates to: PRHQIKDLFLTSHRR*QNWLKYSVLISSLM Trigger: CATAAGAGATGAAATTAGAACACTGTATTTAAGCCAGTTCTGCAACCTTCTATGGCTTGTAAGAAACAGGTCCTTGATTTGATGTCTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR GCA 72 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTaGATTATTTATACGCAAGATGGCTCAACCACAGCA | + |
Preference number: 3 (lower is better) Translates to: KNQEVYAQTQES*IIYTQDGSTTA Trigger: TGCTGTGGTTGAGCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR GCA 72 bp | ATCCAAGTAGGAAATCATGATTGTGAGTCTGGTGCCTaGTCACACCAATTTCTTACTGCAAAACCCACTTTT | + |
Preference number: 3 (lower is better) Translates to: IQVGNHDCESGA*SHQFLTAKPTF Trigger: AAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACAATCATGATTTCCTACTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR TCA 72 bp | GCACTCTCCATAGAGAGATTTAGATCTGTTTCTGACTaGAGCCGTAGGTGGTACAATAAGGATATTTCCTTA | + |
Preference number: 3 (lower is better) Translates to: ALSIERFRSVSD*SRRWYNKDISL Trigger: TAAGGAAATATCCTTATTGTACCACCTACGGCTTCAGTCAGAAACAGATCTAAATCTCTCTATGGAGAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR-3UTR CAA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAAGCAGAAATAGACACTaGGATGAACAAGCATTTCTT | + |
Preference number: 3 (lower is better) Translates to: KNQEVYAQTQESCIIYTQSRNRH*DEQAFL Trigger: AAGAAATGCTTGTTCATCCAAGTGTCTATTTCTGCT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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3UTR CCA 72 bp | GACCTGTTTCTTACAAGCCATAGAAGGTTGCAGAACTaGCTTAAATACAGTGTTCTAATTTCATCTCTTATG | + |
Preference number: 3 (lower is better) Translates to: DLFLTSHRRLQN*LKYSVLISSLM Trigger: CATAAGAGATGAAATTAGAACACTGTATTTAAGCCAGTTCTGCAACCTTCTATGGCTTGTAAGAAACAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCCGATTGCCTGGATGGTaGACGCACACGTGCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGRLPGW*THTCSR Trigger: CCTGGAGCACGTGTGCGTTCACCATCCAGGCAATCG...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCACAGGCTTCCCTCTGTaGTGGGTTAGGGCGGTGGAT | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLTGFPL*WVRAVD Trigger: ATCCACCGCCCTAACCCAGCACAGAGGGAAGCCTGT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCATGATCTTCTGGCGATaGAGCCTAGCGGCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLMIFWR*SLAASA Trigger: AGCTGAGGCCGCTAGGCTTCATCGCCAGAAGATCAT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCCAGACATCTGGGCCATaGTCTTCTGGCGATGAAGCC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLQTSGP*SSGDEA Trigger: GGCTTCATCGCCAGAAGATCATGGCCCAGATGTCTG...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGAACTCCGGAGGAGGTaGCGGCGGCAATGCTTCATC | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHELRRR*RRQCFI Trigger: GATGAAGCATTGCCGCCGCCACCTCCTCCGGAGTTC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGGCCTCACTGACTGCTaGGGTGCTCTCTTCCTCCAT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHGLTDC*GALFLH Trigger: ATGGAGGAAGAGAGCACCTCAGCAGTCAGTGAGGCC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTCAAACAGGTCTACGTaGATGCGCTGCTGCGAGCTC | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGSNRST*MRCCEL Trigger: GAGCTCGCAGCAGCGCATTCACGTAGACCTGTTTGA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTAGCGGAGGTAAGGGGTaGTGCCGTTCCTCAGGGAGA | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLASGGKG*CRSSGR Trigger: TCTCCCTGAGGAACGGCATCACCCCTTACCTCCGCT...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCAGTCGTGTGCAGCTGTaGCTCTGCAAGCTCGCAATC | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGSRVQL*LCKLAI Trigger: GATTGCGAGCTTGCAGAGGCACAGCTGCACACGACT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTGCTCCAGGTCATCATaGGCACTCGTGGGTCTAGTT | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLCSRSS*ALVGLV Trigger: AACTAGACCCACGAGTGCCCATGATGACCTGGAGCA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTATCTCAGCAACAACCTaGGCCACCAGGACCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLAISATT*ATRTRQ Trigger: CTGCCTGGTCCTGGTGGCTCAGGTTGTTGCTGAGAT...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCAGGGCGGTGGATTTCTaGACACATGCTGACAATACC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLRAVDF*THADNT Trigger: GGTATTGTCAGCATGTGTGCAGAAATCCACCGCCCT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTGTGCAACTGCAAACTaGATTAGCGCCTTCAGACCG | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLCATAN*ISAFRP Trigger: CGGTCTGAAGGCGCTAATGCAGTTTGCAGTTGCACA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTGTTGCCAGACCAAATaGAGCTTCCGATACCGCTCC | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGCCQTK*SFRYRS Trigger: GGAGCGGTATCGGAAGCTGCATTTGGTCTGGCAACA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCGGCGATGGCACTATGTaGCATGGGCTCAATGCAAAG | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGGDGTM*HGLNAK Trigger: CTTTGCATTGAGCCCATGCCACATAGTGCCATCGCC...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTGTAAGGCAGACATCTaGGCCATGATCTTCTGGCGA | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLCKADI*AMIFWR Trigger: TCGCCAGAAGATCATGGCCCAGATGTCTGCCTTACA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCACCTCTTGTTCTTCTTaGCAGAGGATGCACGTCAGC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLTSCSS*QRMHVS Trigger: GCTGACGTGCATCCTCTGCCAAGAAGAACAAGAGGT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCCAAGACAGGAACTGCTaGGGCTTCTCCTTTAGCATG | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLQDRNC*GFSFSM Trigger: CATGCTAAAGGAGAAGCCCCAGCAGTTCCTGTCTTG...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGCGCCGACCAGAACATaGAAGAGATCCACGGACAGA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHAPTRT*KRSTDR Trigger: TCTGTCCGTGGATCTCTTCCATGTTCTGGTCGGCGC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCACCAGGACCTCTACTTaGAAGCCGTCAAAAGGCACA | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGTRTST*KPSKGT Trigger: TGTGCCTTTTGACGGCTTTCAAGTAGAGGTCCTGGT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTGCTGCGAGCTCAGCTaGACAGCTTCAAAATACTTC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLCCELS*TASKYF Trigger: GAAGTATTTTGAAGCTGTGCAGCTGAGCTCGCAGCA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCAGACAGAGGACAGGATaGTTTCGCTCATCATCTGCA | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLRQRTG*FRSSSA Trigger: TGCAGATGATGAGCGAAAGCATCCTGTCCTCTGTCT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTGCTGGGTTAGGGCGGTaGATTTCTGCACACATGCTG | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLAAGLGR*ISAHML Trigger: CAGCATGTGTGCAGAAATCCACCGCCCTAACCCAGC...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCCTCCTTCAGCAGAATTaGCAAACAGTTCTTCAGGCG | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLLLQQN*QTVLQA Trigger: CGCCTGAAGAACTGTTTGCCAATTCTGCTGAAGGAG...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAATCCAAGTAAGGGGCTaGGTAGGCACAGCCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQIQVRG*VGTASG Trigger: GCCAGAGGCTGTGCCTACCCAGCCCCTTACTTGGAT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGCTCTTCCAGGCTCGTaGTCCACACAAAAAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQALPGS*STQKGP Trigger: TGGCCCTTTTTGTGTGGATCACGAGCCTGGAAGAGC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGCATGTGCGCCATGGTaGTCAGATGGAAGAGATAGA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHACAPW*SDGRDR Trigger: TCTATCTCTTCCATCTGATCACCATGGCGCACATGC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATTCCTCCTTTGCTTCCTaGCAAGTGGCATACACACCT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHSSFAS*QVAYTP Trigger: AGGTGTGTATGCCACTTGCCAGGAAGCAAAGGAGGA...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTCTGAGAACACAGGATaGCCCCACAGAAAAGACAGA | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGSENTG*PHRKDR Trigger: TCTGTCTTTTCTGTGGGGCCATCCTGTGTTCTCAGA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGGTAGGCACAGCCTCTaGCTTTTCCTTCCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQGRHSL*LFLPPG Trigger: TCCTGGTGGAAGGAAAAGCCAGAGGCTGTGCCTACC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCAATATTCTCCTGGCTTaGGCAATCACCTCTTCATTC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLNILLA*AITSSF Trigger: GAATGAAGAGGTGATTGCTCAAGCCAGGAGAATATT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTTTCTGCACACATGCTaGCAATACCATGGCGTTATT | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLFLHTC*QYHGVI Trigger: AATAACGCCATGGTATTGTCAGCATGTGTGCAGAAA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAAGCAAGCGGCGGCCCTaGAGACAGATCTGTATCTGT | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLSKRRP*RQICIC Trigger: ACAGATACAGATCTGTCTTCAGGGCCGCCGCTTGCT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCAGCTACAGAGTGCACTaGATTCTCCTTCAGCAGAAT | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGSYRVH*ILLQQN Trigger: ATTCTGCTGAAGGAGAATTCAGTGCACTCTGTAGCT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATGGCAACAGATGTTCTaGGAACACAGGATGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQWQQMF*EHRMAP Trigger: TGGGGCCATCCTGTGTTCTCAGAACATCTGTTGCCA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCGCTCCCGAGATAAATaGAGTGGGTTTCCTCTCTTT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHRSRDK*SGFPLF Trigger: AAAGAGAGGAAACCCACTTCATTTATCTCGGGAGCG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTGTACACTCTCTTCTTaGTTTTCCAAATCTGGGTCC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLCTLSS*FSKSGS Trigger: GGACCCAGATTTGGAAAAGCAAGAAGAGAGTGTACA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCCTTTATATCCTCCTTTaGTTCCTGGCAAGTGGCATA | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLLYILL*FLASGI Trigger: TATGCCACTTGCCAGGAAGCAAAGGAGGATATAAAG...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCTTCTGCCAGCACACTaGATGCATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHLLPAH*MHYMTT Trigger: TGTGGTCATGTAATGCATGCAGTGTGCTGGCAGAAG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCTTTCGCTCATCATCTaGAGACCGTGGACACCTAAA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHLSLII*RPWTPK Trigger: TTTAGGTGTCCACGGTCTGCAGATGATGAGCGAAAG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCAAGTGTTCTAGAGAGTaGCAGGTGTATGCTTACAAG | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLKCSRE*QVYAYK Trigger: CTTGTAAGCATACACCTGCCACTCTCTAGAACACTT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGTAGGTTTCTGGCGATaGCACTATGTGGCATGGGCT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQVGFWR*HYVAWA Trigger: AGCCCATGCCACATAGTGCCATCGCCAGAAACCTAC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCACTCCAGTCCTGAAGTaGTTGCCACAACTAAACAAG | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGTPVLK*LPQLNK Trigger: CTTGTTTAGTTGTGGCAACCACTTCAGGACTGGAGT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCCTCCCACAATATAGATaGGGACCTGAAGCATTTCTT | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGLPQYR*GPEAFL Trigger: AAGAAATGCTTCAGGTCCTCATCTATATTGTGGGAG...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCATTGGGGGATTCCTTTaGGTTTTTCCAAGAGCATTT | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLIGGFL*VFPRAF Trigger: AAATGCTCTTGGAAAAACTCAAAGGAATCCCCCAAT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAGCCAAGGTCAAAAGTTaGGCAAGAGCCTCCGCATTC | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLAKVKS*ARASAF Trigger: GAATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGC...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTATTGTGTATCAGGACCTaGGGGCAGGTAGTCCTCTGT | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLLCIRT*GQVVLC Trigger: ACAGAGGACTACCTGCCCTCAGGTCCTGATACACAA...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATAATCCAAATAGCATCTaGTTAGTCTCCTGGCTCCGA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHNPNSI*LVSWLR Trigger: TCGGAGCCAGGAGACTAATCAGATGCTATTTGGATT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATAAACCTTCCAGGAACTaGGCTCTTAATCGTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHKPSRN*ALNRSV Trigger: GACAGAACGATTAAGAGCGCAGTTCCTGGAAGGTTT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTATTGCAGAGAGACTTaGAGAGCGGGCATAGGTACT | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLAYCRET*RAGIGT Trigger: AGTACCTATGCCCGCTCTGCAAGTCTCTCTGCAATA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATACAGAGCACACACGTTaGATCAATTGCACAATCCCT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHTEHTR*INCTIP Trigger: AGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCGTAAGTTCATATCTCTaGAGTACCAGTAACAAGAAC | + |
Preference number: 4 (lower is better) Translates to: SGHGSKDPPILPRPQKVLVSSYL*STSNKN Trigger: GTTCTTGTTACTGGTACTTCAGAGATATGAACTTAC...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTGGCCACTTTGTTTATaGCATTCTCTAAGCCAGTTT | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGWPLCL*HSLSQF Trigger: AAACTGGCTTAGAGAATGTCATAAACAAAGTGGCCA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAACCAAGTCTGGATCCATaGAAAGAGGGTCCAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQPSLDP*KEGPVF Trigger: AAACACTGGACCCTCTTTTCATGGATCCAGACTTGG...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATCTGCTTCAAAGACTTaGGTAAGGCAGGATCTCCAC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQSASKT*VRQDLH Trigger: GTGGAGATCCTGCCTTACTCAAGTCTTTGAAGCAGA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTGTATAAGTTCCATGTaGCAAGTCTGGATCCATGAA | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGCISSM*QVWIHE Trigger: TTCATGGATCCAGACTTGGCACATGGAACTTATACA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATCACTGTTGATCTTCTaGGGCTGCAAAGGGATGATG | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQSLLIF*GCKGMM Trigger: CATCATCCCTTTGCAGCCGCAGAAGATCAACAGTGA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAATAGTGGAAAAGCAGTaGAGCACAGCGGAGGTAAGG | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLIVEKQ*STAEVR Trigger: CCTTACCTCCGCTGTGCTGCACTGCTTTTCCACTAT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGTAGTAAGGGCCTTATaGTATCCCAATATTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHVVRAL*YPNIPG Trigger: TCCAGGAATATTGGGATACCATAAGGCCCTTACTAC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAATCATCTGCAGACCGTaGACACCTAAAGTGAGAAGC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQIICRP*TPKVRS Trigger: GCTTCTCACTTTAGGTGTCCACGGTCTGCAGATGAT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTCTGCTTAAACGTACATaGAGACCAGCAAGTGTTCTA | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLALLKRT*RPASVL Trigger: TAGAACACTTGCTGGTCTTCATGTACGTTTAAGCAG...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGTTTGTGGGTTTCAATaGAGTTTTTCTGTAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHVCGFQ*SFSVRQ Trigger: CTGCCTTACAGAAAAACTTCATTGAAACCCACAAAC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTATTTCACCGAAGACTaGACTCCAAAACTCAGGATG | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLAYFTED*TPKLRM Trigger: CATCCTGAGTTTTGGAGTTCAGTCTTCGGTGAAATA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTTTTTCTCCCTTATCTaGAGTTCAGGAGGCAATTCC | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLAFFSLI*SSGGNS Trigger: GGAATTGCCTCCTGAACTGCAGATAAGGGAGAAAAA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCAAAGGCACAAATTCATaGAGTCTTGAAATAGCACCT | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGKGTNS*SLEIAP Trigger: AGGTGCTATTTCAAGACTGCATGAATTTGTGCCTTT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAAGGTGGCGGCGGCAATaGTTCATCTTTATTTTCTTG | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQRWRRQ*FIFIFL Trigger: CAAGAAAATAAAGATGAAGCATTGCCGCCGCCACCT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAATAATGCAGTGCTGTTaGCAGACCAAATGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQIMQCC*QTKCSF Trigger: GAAGCTGCATTTGGTCTGGCAACAGCACTGCATTAT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGTTATCATGTCCTTCTaGCTTTCTAATTGGGGGATT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHVIMSF*LSNWGI Trigger: AATCCCCCAATTAGAAAGCCAGAAGGACATGATAAC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCACTGTGTCAAACATCTaGAGTATCCATGTTATCATG | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGTVSNI*SIHVIM Trigger: CATGATAACATGGATACTCCAGATGTTTGACACAGT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTATCCATGTGCCAAGTCTaGATCCATGAAAAGAGGGTC | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLSMCQV*IHEKRV Trigger: GACCCTCTTTTCATGGATCCAGACTTGGCACATGGA...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGAGACGTTCTCTGAGTaGCTCTTTATATCCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQETFSE*LFISSF Trigger: AAAGGAGGATATAAAGAGTCACTCAGAGAACGTCTC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAACTAAAGATCAATTCATaGAGGATCTTACGGGCACCT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQLKINS*RILRAP Trigger: AGGTGCCCGTAAGATCCTTCATGAATTGATCTTTAG...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGCTTCAAAATACTTCTaGCAGCACACTGCATGCATT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQASKYF*QHTACI Trigger: AATGCATGCAGTGTGCTGGCAGAAGTATTTTGAAGC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATCTTCTATAATGCAGTaGTGTTGCCAGACCAAATGC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQSSIMQ*CCQTKC Trigger: GCATTTGGTCTGGCAACAGCACTGCATTATAGAAGA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAACACTTTGTAGGATTTaGTTTCCAGACTATGACCGC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQTLCRI*FPDYDR Trigger: GCGGTCATAGTCTGGAAACCAAATCCTACAAAGTGT...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCTGTTTAATCAAATCCTaGTCTTTTGTGGATATGGTC | + |
Preference number: 4 (lower is better) Translates to: QEVYAQTQESCIIYTQDGCLIKS*SFVDMV Trigger: GACCATATCCACAAAAGACCAGGATTTGATTAAACA...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTATCTTGGTACTGGACATaGAATTTGTACTGCACCTCA | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLSWYWT*NLYCTS Trigger: TGAGGTGCAGTACAAATTTCATGTCCAGTACCAAGA...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTAGCATTTGTATATTCTaGGCATTCATGGCTGAACTT | + |
Preference number: 4 (lower is better) Translates to: QKLPSQEAELSDELGSLASICIF*AFMAEL Trigger: AAGTTCAGCCATGAATGCTCAGAATATACAAATGCT...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATATTCTGAGCATTCATaGCTGAACTTCCCAATCTTG | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQYSEHS*LNFPIL Trigger: CAAGATTGGGAAGTTCAGCCATGAATGCTCAGAATA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTATATAACCCGATATTCTaGCAAGGACAGTCTGTATCC | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLYNPIF*QGQSVS Trigger: GGATACAGACTGTCCTTGCCAGAATATCGGGTTATA...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGTATCCCAATATTCCTaGAAAAGCAGGAACAAATTT | + |
Preference number: 4 (lower is better) Translates to: CESGACSHQFLTAKPTFHVSQYS*KSRNKF Trigger: AAATTTGTTCCTGCTTTTCCAGGAATATTGGGATAC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATATAACCCTGGAAGTTaGATTTATTGTTCCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQYNPGS*IYCSCP Trigger: TGGACAGGAACAATAAATTCAACTTCCAGGGTTATA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAAAACTCAGGATGGAATaGAACTCAAAAGTCGAATCC | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLKLRME*NSKVES Trigger: GGATTCGACTTTTGAGTTTCATTCCATCCTGAGTTT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATTATGCTGTCTATTTTaGAGTGCTCCAAATAGAGGT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQLCCLF*SAPNRG Trigger: ACCTCTATTTGGAGCACTTCAAAATAGACAGCATAA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR TCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAAGAGTAACTGCCAGTTaGATCCAAATAGCATCTGAT | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLRVTAS*IQIASD Trigger: ATCAGATGCTATTTGGATTCAACTGGCAGTTACTCT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAACACGTTGGATCAATTaGACAATCCCTACAGGAATA | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLTRWIN*TIPTGI Trigger: TATTCCTGTAGGGATTGTGCAATTGATCCAACGTGT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAACCACAGCACTTTTCTaGTTCAAAGACTTGAGTAAG | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLTTALF*FKDLSK Trigger: CTTACTCAAGTCTTTGAAGCAGAAAAGTGCTGTGGT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGGATTTTTAAGAAAATaGAGACTCCAGCACCACAAT | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQGFLRK*RLQHHN Trigger: ATTGTGGTGCTGGAGTCTGCATTTTCTTAAAAATCC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CCA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGCAGGAACAAATTTGTaGGTAAAGATAGATAGCTAC | + |
Preference number: 4 (lower is better) Translates to: KNQEVYAQTQESCIIYTQAGTNL*VKIDSY Trigger: GTAGCTATCTATCTTTACCCACAAATTTGTTCCTGC...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR GCA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAATTTCTTCCATTCCCTaGATACAGGTAAGAATCTTC | + |
Preference number: 4 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLISSIP*IQVRIF Trigger: GAAGATTCTTACCTGTATGCAGGGAATGGAAGAAAT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | CACAGGTACCAGCCGGGAGCACCGCACCCAGCGAGGCCGTCTGTGTaGTGCGACACTTCCACAAAGAAAGCAGATGCACAGCGAGCCTCC | + |
Preference number: 5 (lower is better) Translates to: HRYQPGAPHPARPSV*CDTSTKKADAQRAS Trigger: GGAGGCTCGCTGTGCATCTGCTTTCTTTGTGGAAGTGTCGCAGCACACAGACGGCCTCGCTGGGTGCGGTGCTCCCGGCTGGTACCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | AGGTACCAGCCGGGAGCACCGCACCCAGCGAGGCCGTCTGTGTGCTaGGACACTTCCACAAAGAAAGCAGATGCACAGCGAGCCTCCTCA | + |
Preference number: 5 (lower is better) Translates to: RYQPGAPHPARPSVC*DTSTKKADAQRASS Trigger: TGAGGAGGCTCGCTGTGCATCTGCTTTCTTTGTGGAAGTGTCGCAGCACACAGACGGCCTCGCTGGGTGCGGTGCTCCCGGCTGGTACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | CAAGTAAATAGTGGAAAAGCAGTGCAGCACAGCGGAGGTAAGGGGTaGTGCCGTTCCTCAGGGAGAGCCACAGGTACCAGCCGGGAGCAC | + |
Preference number: 5 (lower is better) Translates to: QVNSGKAVQHSGGKG*CRSSGRATGTSREH Trigger: GTGCTCCCGGCTGGTACCTGTGGCTCTCCCTGAGGAACGGCATCACCCCTTACCTCCGCTGTGCTGCACTGCTTTTCCACTATTTACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | AGCGAGGCCGTCTGTGTGCTGCGACACTTCCACAAAGAAAGCAGATaGACAGCGAGCCTCCTCACTATCCTCTTCACCCTCAGCAAGCGG | + |
Preference number: 5 (lower is better) Translates to: SEAVCVLRHFHKESR*TASLLTILFTLSKR Trigger: CCGCTTGCTGAGGGTGAAGAGGATAGTGAGGAGGCTCGCTGTGCATCTGCTTTCTTTGTGGAAGTGTCGCAGCACACAGACGGCCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | AGCGGGCATAGGTACTCGCCGCTCTCCAGGTCAAACAGGTCTACGTaGATGCGCTGCTGCGAGCTCAGCTGCACAGCTTCAAAATACTTC | + |
Preference number: 5 (lower is better) Translates to: SGHRYSPLSRSNRST*MRCCELSCTASKYF Trigger: GAAGTATTTTGAAGCTGTGCAGCTGAGCTCGCAGCAGCGCATTCACGTAGACCTGTTTGACCTGGAGAGCGGCGAGTACCTATGCCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | GGCATAGGTACTCGCCGCTCTCCAGGTCAAACAGGTCTACGTGAATaGGCTGCTGCGAGCTCAGCTGCACAGCTTCAAAATACTTCTGCC | + |
Preference number: 5 (lower is better) Translates to: GIGTRRSPGQTGLRE*AAASSAAQLQNTSA Trigger: GGCAGAAGTATTTTGAAGCTGTGCAGCTGAGCTCGCAGCAGCGCATTCACGTAGACCTGTTTGACCTGGAGAGCGGCGAGTACCTATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | TTATATCCTCCTTTGCTTCCTGGCAAGTGGCATACACACCTGCTTTaGCAGCCCGGCGACCCTCTTTGTCGATGGCAGTCGTGTGCAGCT | + |
Preference number: 5 (lower is better) Translates to: LYPPLLPGKWHTHLL*QPGDPLCRWQSCAA Trigger: AGCTGCACACGACTGCCATCGACAAAGAGGGTCGCCGGGCTGTCAAAGCAGGTGTGTATGCCACTTGCCAGGAAGCAAAGGAGGATATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | ATAATTTTGTTCATCCAGGAGCCAAGGCGCAGAGCGAATTTCTGGTaGGCCATAACCACGGAGTGCAGCACTTCCACATGGAGGGGGTGC | + |
Preference number: 5 (lower is better) Translates to: IILFIQEPRRRANFW*AITTECSTSTWRGC Trigger: GCACCCCCTCCATGTGGAAGTGCTGCACTCCGTGGTTATGGCTCACCAGAAATTCGCTCTGCGCCTTGGCTCCTGGATGAACAAAATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | ATTCTGGCAAGGACAGTCTGTATCCACCGGGCCAAGGTCAAAAGTTaGGCAAGAGCCTCCGCATTCTCACTGTTGATCTTCTGCGGCTGC | + |
Preference number: 5 (lower is better) Translates to: ILARTVCIHRAKVKS*ARASAFSLLIFCGC Trigger: GCAGCCGCAGAAGATCAACAGTGAGAATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGCCCGGTGGATACAGACTGTCCTTGCCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | ACTCTTTATATCCTCCTTTGCTTCCTGGCAAGTGGCATACACACCTaGTTTGACAGCCCGGCGACCCTCTTTGTCGATGGCAGTCGTGTG | + |
Preference number: 5 (lower is better) Translates to: TLYILLCFLASGIHT*FDSPATLFVDGSRV Trigger: CACACGACTGCCATCGACAAAGAGGGTCGCCGGGCTGTCAAAGCAGGTGTGTATGCCACTTGCCAGGAAGCAAAGGAGGATATAAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | AGAATAACTGACAGGAGCCGAGCCAGATGTTTGTGTATCAGGACCTaGGGGCAGGTAGTCCTCTGTGCAACTGCAAACTGCATTAGCGCC | + |
Preference number: 5 (lower is better) Translates to: RITDRSRARCLCIRT*GQVVLCATANCISA Trigger: GGCGCTAATGCAGTTTGCAGTTGCACAGAGGACTACCTGCCCTCAGGTCCTGATACACAAACATCTGGCTCGGCTCCTGTCAGTTATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | TTCAGGAGCTTTCTGAAGCTGCTGCTTCTCTTCCAGCAAGCCCAGTaGCAATATATGGAACGCCATCTGCAGCATCCCTTCTGTCCACAG | + |
Preference number: 5 (lower is better) Translates to: FRSFLKLLLLFQQAQ*QYMERHLQHPFCPQ Trigger: CTGTGGACAGAAGGGATGCTGCAGATGGCGTTCCATATATTGGCACTGGGCTTGCTGGAAGAGAAGCAGCAGCTTCAGAAAGCTCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 90 bp | CCCCTAAGTGGTCCACAGGCTTCCCTCTGTGCTGGGTTAGGGCGGTaGATTTCTGCACACATGCTGACAATACCATGGCGTTATTTTCTA | + |
Preference number: 5 (lower is better) Translates to: PLSGPQASLCAGLGR*ISAHMLTIPWRYFL Trigger: TAGAAAATAACGCCATGGTATTGTCAGCATGTGTGCAGAAATCCACCGCCCTAACCCAGCACAGAGGGAAGCCTGTGGACCACTTAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | GACCACAGCTTCCTGTATAAGTTCCATGTGCCAAGTCTGGATCCATaGAAAGAGGGTCCAGTGTTTCCCCTAAGTGGTCCACAGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: DHSFLYKFHVPSLDP*KEGPVFPLSGPQAS Trigger: GGAAGCCTGTGGACCACTTAGGGGAAACACTGGACCCTCTTTTCATGGATCCAGACTTGGCACATGGAACTTATACAGGAAGCTGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | TGGTCCACAGGCTTCCCTCTGTGCTGGGTTAGGGCGGTGGATTTCTaGACACATGCTGACAATACCATGGCGTTATTTTCTAGTTTCACC | + |
Preference number: 5 (lower is better) Translates to: WSTGFPLCWVRAVDF*THADNTMALFSSFT Trigger: GGTGAAACTAGAAAATAACGCCATGGTATTGTCAGCATGTGTGCAGAAATCCACCGCCCTAACCCAGCACAGAGGGAAGCCTGTGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 90 bp | TCCCAATACAAGGATGGGAACGCTAAGACTGCGCCGACCAGAACATaGAAGAGATCCACGGACAGAAGGCCTGGTGTATTTTCTGATTGC | + |
Preference number: 5 (lower is better) Translates to: SQYKDGNAKTAPTRT*KRSTDRRPGVFSDC Trigger: GCAATCAGAAAATACACCAGGCCTTCTGTCCGTGGATCTCTTCCATGTTCTGGTCGGCGCAGTCTTAGCGTTCCCATCCTTGTATTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | TGTTGCCAGACCAAATGCAGCTTCCGATACCGCTCCCGAGATAAATaGAGTGGGTTTCCTCTCTTTAGCCCTGGGTCTGTTTCTCCATAT | + |
Preference number: 5 (lower is better) Translates to: CCQTKCSFRYRSRDK*SGFPLFSPGSVSPY Trigger: ATATGGAGAAACAGACCCAGGGCTAAAGAGAGGAAACCCACTTCATTTATCTCGGGAGCGGTATCGGAAGCTGCATTTGGTCTGGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | CATCTGCAGCATCCCTTCTGTCCACAGATTAGACTCCATGTCCACTaGCCGCTCAAAGATGGTCCTGAGGATGTACATCATAACATCACA | + |
Preference number: 5 (lower is better) Translates to: HLQHPFCPQIRLHVH*PLKDGPEDVHHNIT Trigger: TGTGATGTTATGATGTACATCCTCAGGACCATCTTTGAGCGGGCAGTGGACATGGAGTCTAATCTGTGGACAGAAGGGATGCTGCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | GCACGGACAGGGCGGTTATGGAGATGCTTCTCTCGTGGTCGTCGCTaGTGTACTCTTTCTGCAGCTGTTTATAATACTTCACAAATTCCA | + |
Preference number: 5 (lower is better) Translates to: ARTGRLWRCFSRGRR*CTLSAAVYNTSQIP Trigger: TGGAATTTGTGAAGTATTATAAACAGCTGCAGAAAGAGTACATCAGCGACGACCACGAGAGAAGCATCTCCATAACCGCCCTGTCCGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAGCATACACACCTGCTTaGACAGCCCGGCGACCCTCT | + |
Preference number: 5 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLAYTPA*TARRPS Trigger: AGAGGGTCGCCGGGCTGTCAAAGCAGGTGTGTATGC...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCTCACAGCTGAGCAGGTaGACTACTTTGCTGAAAGCA | + |
Preference number: 5 (lower is better) Translates to: SGHGSKDPPILPRPQKVLSQLSR*TTLLKA Trigger: TGCTTTCAGCAAAGTAGTCAACCTGCTCAGCTGTGA...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATGGCCAAGGTCAAAAGTaGAGCAAGAGCCTCCGCATT | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHGQGQK*SKSLRI Trigger: AATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGCC...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | GGTAAAACTTCTAGCAGCGTTTCAGTAATGACAGAAATAACATTCTaGTCTTCAATAAGATGCCGGGCCAAGGTCGGGACGGTGAGCATC | + |
Preference number: 5 (lower is better) Translates to: GKTSSSVSVMTEITF*SSIRCRAKVGTVSI Trigger: GATGCTCACCGTCCCGACCTTGGCCCGGCATCTTATTGAAGAGCAGAATGTTATTTCTGTCATTACTGAAACGCTGCTAGAAGTTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | TCACAAGCACACCACTCTTGGAACATGAGCAAAATATTCTTTAGTTaGATCTGTATAGCGATGGCAGCCTCCCAGTCAGGGTCCACTTCA | + |
Preference number: 5 (lower is better) Translates to: SQAHHSWNMSKIFFS*ICIAMAASQSGSTS Trigger: TGAAGTGGACCCTGACTGGGAGGCTGCCATCGCTATACAGATGCAACTAAAGAATATTTTGCTCATGTTCCAAGAGTGGTGTGCTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTCACCTCTTGTTCTTCTaGGCAGAGGATGCACGTCAG | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLAHLLFF*AEDARQ Trigger: CTGACGTGCATCCTCTGCCAAGAAGAACAAGAGGTG...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTGTATTGCAGAGAGACTaGCAGAGCGGGCATAGGTAC | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLAVLQRD*QSGHRY Trigger: GTACCTATGCCCGCTCTGCAAGTCTCTCTGCAATAC...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCCGAATCCCCCATTCCTaGATTAAACAAGACAGGAAC | + |
Preference number: 5 (lower is better) Translates to: SGHGSKDPPILPRPQKVLRIPHS*IKQDRN Trigger: GTTCCTGTCTTGTTTAATCAAGGAATGGGGGATTCG...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | TTCTTCTACGAGGCAGGCCTGGCAAAATATCTGTCTAAAGTCACTTaGATAGCTCATAATTTTGTTCATCCAGGAGCCAAGGCGCAGAGC | + |
Preference number: 5 (lower is better) Translates to: FFYEAGLAKYLSKVT*IAHNFVHPGAKAQS Trigger: GCTCTGCGCCTTGGCTCCTGGATGAACAAAATTATGAGCTATTCAAGTGACTTTAGACAGATATTTTGCCAGGCCTGCCTCGTAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | TTTCTGGCGATGGCACTATGTGGCATGGGCTCAATGCAAAGTAAGTaGGTAATCTCTCTCATTATAACCTCCTCTCTGGTAACATTTCCC | + |
Preference number: 5 (lower is better) Translates to: FLAMALCGMGSMQSK*VISLIITSSLVTFP Trigger: GGGAAATGTTACCAGAGAGGAGGTTATAATGAGAGAGATTACTCACTTACTTTGCATTGAGCCCATGCCACATAGTGCCATCGCCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | GCAGGAACAAATTTGTGGGTAAAGATAGATAGCTACAGAGTGCACTaGATTCTCCTTCAGCAGAATTGGCAAACAGTTCTTCAGGCGGAG | + |
Preference number: 5 (lower is better) Translates to: AGTNLWVKIDSYRVH*ILLQQNWQTVLQAE Trigger: CTCCGCCTGAAGAACTGTTTGCCAATTCTGCTGAAGGAGAATTCAGTGCACTCTGTAGCTATCTATCTTTACCCACAAATTTGTTCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 90 bp | ATACAGGTAAGAATCTTCAGAAAAGACCGGAAACCTTCCAGGAACTaGGCTCTTAATCGTTCTGTCCATATGACAGGCTTGCTAATCAGG | + |
Preference number: 5 (lower is better) Translates to: IQVRIFRKDRKPSRN*ALNRSVHMTGLLIR Trigger: CCTGATTAGCAAGCCTGTCATATGGACAGAACGATTAAGAGCGCAGTTCCTGGAAGGTTTCCGGTCTTTTCTGAAGATTCTTACCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTACAGAGCACACACGTaGGATCAATTGCACAATCCC | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLAYRAHT*DQLHNP Trigger: GGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCGAATATTCTCCTGGCTaGAGCAATCACCTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: QEVYAQTQESCIIYTQDGEYSPG*SNHLFI Trigger: AATGAAGAGGTGATTGCTCAAGCCAGGAGAATATTC...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCGTCCACTTCAATGTGTaGTCCAACTTGTCTTCTGAT | + |
Preference number: 5 (lower is better) Translates to: QEVYAQTQESCIIYTQDGVHFNV*SNLSSD Trigger: ATCAGAAGACAAGTTGGACAACACATTGAAGTGGAC...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATACTATGACCGCACAATaGCACTACTGTCTTGGTACT | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHTMTAQ*HYCLGT Trigger: AGTACCAAGACAGTAGTGCAATTGTGCGGTCATAGT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCCAGTCCTGAAGTGGTaGCCACAACTAAACAAGATT | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHPVLKW*PQLNKI Trigger: AATCTTGTTTAGTTGTGGCAACCACTTCAGGACTGG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTAGTATAGAAATCAACTaGCTGATCCCACCACGATGC | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLASIEIN*LIPPRC Trigger: GCATCGTGGTGGGATCAGCAAGTTGATTTCTATACT...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTCACACGTTGGATCAATaGCACAATCCCTACAGGAAT | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLAHTLDQ*HNPYRN Trigger: ATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTG...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTTCTTTATATCCTCCTTaGCTTCCTGGCAAGTGGCAT | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLASLYPP*LPGKWH Trigger: ATGCCACTTGCCAGGAAGCAAAGGAGGATATAAAGA...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TCTGGACATGGATCAAAAGACCCTCCAATACTTCCCCGTCCTCAGAAAGTTCTCAATTGCACTACTGTCTaGGTACTGGACATGAAATTT | + |
Preference number: 5 (lower is better) Translates to: SGHGSKDPPILPRPQKVLNCTTV*VLDMKF Trigger: AAATTTCATGTCCAGTACCAAGACAGTAGTGCAATT...GAGAACTTTCTGAGGACGGGGAAGTATTGGAGGGTCTTTTGATCCATGTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATCCCATTCACTATTTCTaGGCAACAGATGTTCTGAGA | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHPIHYF*ATDVLR Trigger: TCTCAGAACATCTGTTGCCAAGAAATAGTGAATGGG...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | CTGCGTAGACTCTTCCCAGTTTGTCCTGGCTATAACCCTGGAAGTTaGATTTATTGTTCCTGTCCAAGTATTCAGGTAAAACTTCTAGCA | + |
Preference number: 5 (lower is better) Translates to: LRRLFPVCPGYNPGS*IYCSCPSIQVKLLA Trigger: TGCTAGAAGTTTTACCTGAATACTTGGACAGGAACAATAAATTCAACTTCCAGGGTTATAGCCAGGACAAACTGGGAAGAGTCTACGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAGAAACTTCCATCTCAAGAAGCAGAACTGAGTGATGAATTAGGCTCTTTGGCTGTTGTTTCTCCACTTTaGAAAACCTTCCCACACAAC | + |
Preference number: 5 (lower is better) Translates to: QKLPSQEAELSDELGSLAVVSPL*KTFPHN Trigger: GTTGTGTGGGAAGGTTTTCAAAAGTGGAGAAACAAC...AGCCAAAGAGCCTAATTCATCACTCAGTTCTGCTTCTTGAGATGGAAGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATAATTGGGGGATTCCTTaGAGTTTTTCCAAGAGCATT | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHNWGIP*SFSKSI Trigger: AATGCTCTTGGAAAAACTCAAAGGAATCCCCCAATT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTATCTCCTTCAGCAGAATaGGCAAACAGTTCTTCAGGC | + |
Preference number: 5 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLSPSAE*ANSSSG Trigger: GCCTGAAGAACTGTTTGCCAATTCTGCTGAAGGAGA...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | CAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAAGATGGCAAAGCAGGAACAAATTaGTGGGTAAAGATAGATAGC | + |
Preference number: 5 (lower is better) Translates to: QEVYAQTQESCIIYTQDGKAGTN*WVKIDS Trigger: GCTATCTATCTTTACCCACAAATTTGTTCCTGCTTT...GCCATCTTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATTCTGCTTCAAAGACTaGAGTAAGGCAGGATCTCCA | + |
Preference number: 5 (lower is better) Translates to: KNQEVYAQTQESCIIYTQFCFKD*SKAGSP Trigger: TGGAGATCCTGCCTTACTCAAGTCTTTGAAGCAGAA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | AGCAAATATCCGGATCCTCTCCAAATAAGTACCACTCCAAAGGAGTaGGTATTGACATCTGTACACTCTCTTCTTGCTTTTCCAAATCTG | + |
Preference number: 5 (lower is better) Translates to: SKYPDPLQISTTPKE*VLTSVHSLLAFPNL Trigger: CAGATTTGGAAAAGCAAGAAGAGAGTGTACAGATGTCAATACTCACTCCTTTGGAGTGGTACTTATTTGGAGAGGATCCGGATATTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 90 bp | TTTATGAACACTACTTTGGAAGCAGTCCATACAGAGCACACACGTTaGATCAATTGCACAATCCCTACAGGAATATGTTGTTTCTCCACT | + |
Preference number: 5 (lower is better) Translates to: FMNTTLEAVHTEHTR*INCTIPTGICCFST Trigger: AGTGGAGAAACAACATATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGTGTTCATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 90 bp | TCTTCCTTCCCTGTTACTTCTGACGTATTATCATACATGAGTTTGTaGGTTTCAATGAAGTTTTTCTGTAAGGCAGACATCTGGGCCATG | + |
Preference number: 5 (lower is better) Translates to: SSFPVTSDVLSYMSL*VSMKFFCKADIWAM Trigger: CATGGCCCAGATGTCTGCCTTACAGAAAAACTTCATTGAAACCCACAAACTCATGTATGATAATACGTCAGAAGTAACAGGGAAGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | TGTGAGTCTGGTGCCTGCTCACACCAATTTCTTACTGCAAAACCCACTTTTCATAGTAACAAGAACTTGTaGGGATCCATTATAGATGCT | + |
Preference number: 5 (lower is better) Translates to: CESGACSHQFLTAKPTFHSNKNL*GSIIDA Trigger: AGCATCTATAATGGATCCCAACAAGTTCTTGTTACT...ATGAAAAGTGGGTTTTGCAGTAAGAAATTGGTGTGAGCAGGCACCAGACTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | TCTGCAGACTGTAGATCACATGATCATACGAATGGTGCTCATCGTTaGAAAGGACACAATAGTATCGTTCATTTTTCTCCCTTATCTGCA | + |
Preference number: 5 (lower is better) Translates to: SADCRSHDHTNGAHR*KGHNSIVHFSPLSA Trigger: TGCAGATAAGGGAGAAAAATGAACGATACTATTGTGTCCTTTTCAACGATGAGCACCATTCGTATGATCATGTGATCTACAGTCTGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 90 bp | GGTGCTCTCTTCCTCCATAATGGAGTCTTCCTTCCCTGTTACTTCTaGCGTATTATCATACATGAGTTTGTGGGTTTCAATGAAGTTTTT | + |
Preference number: 5 (lower is better) Translates to: GALFLHNGVFLPCYF*RIIIHEFVGFNEVF Trigger: AAAAACTTCATTGAAACCCACAAACTCATGTATGATAATACGTCAGAAGTAACAGGGAAGGAAGACTCCATTATGGAGGAAGAGAGCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 90 bp | TTCACTGTGTCAAACATCTGGAGTATCCATGTTATCATGTCCTTCTaGCTTTCTAATTGGGGGATTCCTTTGAGTTTTTCCAAGAGCATT | + |
Preference number: 5 (lower is better) Translates to: FTVSNIWSIHVIMSF*LSNWGIPLSFSKSI Trigger: AATGCTCTTGGAAAAACTCAAAGGAATCCCCCAATTAGAAAGCCAGAAGGACATGATAACATGGATACTCCAGATGTTTGACACAGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAATTTATGAACACTACTTaGGAAGCAGTCCATACAGAG | + |
Preference number: 5 (lower is better) Translates to: KNQEVYAQTQESCIIYTQFMNTT*EAVHTE Trigger: CTCTGTATGGACTGCTTCCAAAGTAGTGTTCATAAA...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAACTGAACTTCCCAATCTaGAAGCCTTATGGTAAAAGT | + |
Preference number: 5 (lower is better) Translates to: KNQEVYAQTQESCIIYTQLNFPI*KPYGKS Trigger: ACTTTTACCATAAGGCTTCAAGATTGGGAAGTTCAG...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AAGAATCAAGAGGTCTATGCACAGACTCAGGAGAGCTGCATTATTTATACGCAACACCTTTATAAAGTTTaGCATCCCAAAGCATTAGTC | + |
Preference number: 5 (lower is better) Translates to: KNQEVYAQTQESCIIYTQHLYKV*HPKALV Trigger: GACTAATGCTTTGGGATGCAAAACTTTATAAAGGTG...TTGCGTATAAATAATGCAGCTCTCCTGAGTCTGTGCATAGACCTCTTGATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS-3UTR CAA 90 bp | AGAGATGTTAGCCAGATGGAGAAATGTCCACAAATGCTTAATGTGACCTCATTAAATGTGTTGTCCAACTaGTCTTCTGATTTCTTCCAT | + |
Preference number: 5 (lower is better) Translates to: RDVSQMEKCPQMLNVTSLNVLSN*SSDFFH Trigger: ATGGAAGAAATCAGAAGACAAGTTGGACAACACATT...TAATGAGGTCACATTAAGCATTTGTGGACATTTCTCCATCTGGCTAACATCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | ATGCCGGCCGCTGCGGGGCCAGGGGAGGCTCCGGGCTaGCGTCCATCCTCTCGGCGCCGTCCATCTCTTCGT | + |
Preference number: 6 (lower is better) Translates to: MPAAAGPGEAPG*RPSSRRRPSLR Trigger: ACGAAGAGATGGACGGCGCCGAGAGGATGGACGTCAGCCCGGAGCCTCCCCTGGCCCCGCAGCGGCCGGCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CCGGGAGCACCGCACCCAGCGAGGCCGTCTGTGTGCTaGGACACTTCCACAAAGAAAGCAGATGCACAGCGA | + |
Preference number: 6 (lower is better) Translates to: PGAPHPARPSVC*DTSTKKADAQR Trigger: TCGCTGTGCATCTGCTTTCTTTGTGGAAGTGTCGCAGCACACAGACGGCCTCGCTGGGTGCGGTGCTCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CAGCCGGGAGCACCGCACCCAGCGAGGCCGTCTGTGTaGTGCGACACTTCCACAAAGAAAGCAGATGCACAG | + |
Preference number: 6 (lower is better) Translates to: QPGAPHPARPSV*CDTSTKKADAQ Trigger: CTGTGCATCTGCTTTCTTTGTGGAAGTGTCGCAGCACACAGACGGCCTCGCTGGGTGCGGTGCTCCCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | AGTGGAAAAGCAGTGCAGCACAGCGGAGGTAAGGGGTaGTGCCGTTCCTCAGGGAGAGCCACAGGTACCAGC | + |
Preference number: 6 (lower is better) Translates to: SGKAVQHSGGKG*CRSSGRATGTS Trigger: GCTGGTACCTGTGGCTCTCCCTGAGGAACGGCATCACCCCTTACCTCCGCTGTGCTGCACTGCTTTTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | AGGTACTCGCCGCTCTCCAGGTCAAACAGGTCTACGTaGATGCGCTGCTGCGAGCTCAGCTGCACAGCTTCA | + |
Preference number: 6 (lower is better) Translates to: RYSPLSRSNRST*MRCCELSCTAS Trigger: TGAAGCTGTGCAGCTGAGCTCGCAGCAGCGCATTCACGTAGACCTGTTTGACCTGGAGAGCGGCGAGTACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | TGCGGCTGCAAAGGGATGATGGGGATGACAGTATTGCAGAGAGACTaGCAGAGCGGGCATAGGTACTCGCCGCTCTCCAGGTCAAACAGG | + |
Preference number: 6 (lower is better) Translates to: CGCKGMMGMTVLQRD*QSGHRYSPLSRSNR Trigger: CCTGTTTGACCTGGAGAGCGGCGAGTACCTATGCCCGCTCTGCAAGTCTCTCTGCAATACTGTCATCCCCATCATCCCTTTGCAGCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | ATCCTCCTTTGCTTCCTGGCAAGTGGCATACACACCTaGTTTGACAGCCCGGCGACCCTCTTTGTCGATGGC | + |
Preference number: 6 (lower is better) Translates to: ILLCFLASGIHT*FDSPATLFVDG Trigger: GCCATCGACAAAGAGGGTCGCCGGGCTGTCAAAGCAGGTGTGTATGCCACTTGCCAGGAAGCAAAGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | GGTCCACAGGCTTCCCTCTGTGCTGGGTTAGGGCGGTaGATTTCTGCACACATGCTGACAATACCATGGCGT | + |
Preference number: 6 (lower is better) Translates to: GPQASLCAGLGR*ISAHMLTIPWR Trigger: ACGCCATGGTATTGTCAGCATGTGTGCAGAAATCCACCGCCCTAACCCAGCACAGAGGGAAGCCTGTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | CTGTTGATCTTCTGCGGCTGCAAAGGGATGATGGGGATGACAGTATaGCAGAGAGACTTGCAGAGCGGGCATAGGTACTCGCCGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: LLIFCGCKGMMGMTV*QRDLQSGHRYSPLS Trigger: GGAGAGCGGCGAGTACCTATGCCCGCTCTGCAAGTCTCTCTGCAATACTGTCATCCCCATCATCCCTTTGCAGCCGCAGAAGATCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | TTCATCCAGGAGCCAAGGCGCAGAGCGAATTTCTGGTaGGCCATAACCACGGAGTGCAGCACTTCCACATGG | + |
Preference number: 6 (lower is better) Translates to: FIQEPRRRANFW*AITTECSTSTW Trigger: CCATGTGGAAGTGCTGCACTCCGTGGTTATGGCTCACCAGAAATTCGCTCTGCGCCTTGGCTCCTGGATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | GACAGGAGCCGAGCCAGATGTTTGTGTATCAGGACCTaGGGGCAGGTAGTCCTCTGTGCAACTGCAAACTGC | + |
Preference number: 6 (lower is better) Translates to: DRSRARCLCIRT*GQVVLCATANC Trigger: GCAGTTTGCAGTTGCACAGAGGACTACCTGCCCTCAGGTCCTGATACACAAACATCTGGCTCGGCTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | ACTCGCCGCTCTCCAGGTCAAACAGGTCTACGTGAATaGGCTGCTGCGAGCTCAGCTGCACAGCTTCAAAAT | + |
Preference number: 6 (lower is better) Translates to: TRRSPGQTGLRE*AAASSAAQLQN Trigger: ATTTTGAAGCTGTGCAGCTGAGCTCGCAGCAGCGCATTCACGTAGACCTGTTTGACCTGGAGAGCGGCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | ATTCATCCAAGTAAGGGGCTGGGTAGGCACAGCCTCTaGCTTTTCCTTCCACCAGGACCACCCTGCATTCTC | + |
Preference number: 6 (lower is better) Translates to: IHPSKGLGRHSL*LFLPPGPPCIL Trigger: GAGAATGCAGGGTGGTCCTGGTGGAAGGAAAAGCCAGAGGCTGTGCCTACCCAGCCCCTTACTTGGATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | AAAGGGATGATGGGGATGACAGTATTGCAGAGAGACTaGCAGAGCGGGCATAGGTACTCGCCGCTCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: KGMMGMTVLQRD*QSGHRYSPLSR Trigger: CCTGGAGAGCGGCGAGTACCTATGCCCGCTCTGCAAGTCTCTCTGCAATACTGTCATCCCCATCATCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | CTTCATCTCCCAACAGGTTTTCGATTGCCTGGATGGTaGACGCACACGTGCTCCAGGTCATCATGGGCACTC | + |
Preference number: 6 (lower is better) Translates to: LHLPTGFRLPGW*THTCSRSSWAL Trigger: GAGTGCCCATGATGACCTGGAGCACGTGTGCGTTCACCATCCAGGCAATCGAAAACCTGTTGGGAGATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | CAGGCAGCGCAGCGGGTACTCCACCAGGACCTCTACTaGAAAGCCGTCAAAAGGCACAAATTCATGCAGTCT | + |
Preference number: 6 (lower is better) Translates to: QAAQRVLHQDLY*KAVKRHKFMQS Trigger: AGACTGCATGAATTTGTGCCTTTTGACGGCTTTCAAGTAGAGGTCCTGGTGGAGTACCCGCTGCGCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | CTGAGGATGTACATCATAACATCACAGCTGAGCAGGTTGACTACTTaGCTGAAAGCAGGGCAGAACTCCGGAGGAGGTGGCGGCGGCAAT | + |
Preference number: 6 (lower is better) Translates to: LRMYIITSQLSRLTT*LKAGQNSGGGGGGN Trigger: ATTGCCGCCGCCACCTCCTCCGGAGTTCTGCCCTGCTTTCAGCAAAGTAGTCAACCTGCTCAGCTGTGATGTTATGATGTACATCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | AGGCAGCGCAGCGGGTACTCCACCAGGACCTCTACTTaGAAGCCGTCAAAAGGCACAAATTCATGCAGTCTT | + |
Preference number: 6 (lower is better) Translates to: RQRSGYSTRTST*KPSKGTNSCSL Trigger: AAGACTGCATGAATTTGTGCCTTTTGACGGCTTTCAAGTAGAGGTCCTGGTGGAGTACCCGCTGCGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | TGGCTCCGAGCAATCTCTTCTATAATGCAGTGCTGTTaGCAGACCAAATGCAGCTTCCGATACCGCTCCCGA | + |
Preference number: 6 (lower is better) Translates to: WLRAISSIMQCC*QTKCSFRYRSR Trigger: TCGGGAGCGGTATCGGAAGCTGCATTTGGTCTGGCAACAGCACTGCATTATAGAAGAGATTGCTCGGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | GTCTCCTGGCTCCGAGCAATCTCTTCTATAATGCAGTaGTGTTGCCAGACCAAATGCAGCTTCCGATACCGC | + |
Preference number: 6 (lower is better) Translates to: VSWLRAISSIMQ*CCQTKCSFRYR Trigger: GCGGTATCGGAAGCTGCATTTGGTCTGGCAACAGCACTGCATTATAGAAGAGATTGCTCGGAGCCAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | TGCACGGACAGGGCGGTTATGGAGATGCTTCTCTCGTaGTCGTCGCTGATGTACTCTTTCTGCAGCTGTTTA | + |
Preference number: 6 (lower is better) Translates to: CTDRAVMEMLLS*SSLMYSFCSCL Trigger: TAAACAGCTGCAGAAAGAGTACATCAGCGACGACCACGAGAGAAGCATCTCCATAACCGCCCTGTCCGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | TGCTGCTTCTCTTCCAGCAAGCCCAGTGCCAATATATaGAACGCCATCTGCAGCATCCCTTCTGTCCACAGA | + |
Preference number: 6 (lower is better) Translates to: CCFSSSKPSANI*NAICSIPSVHR Trigger: TCTGTGGACAGAAGGGATGCTGCAGATGGCGTTCCATATATTGGCACTGGGCTTGCTGGAAGAGAAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | TATTCTGGCAAGGACAGTCTGTATCCACCGGGCCAAGGTCAAAAGTaGAGCAAGAGCCTCCGCATTCTCACTGTTGATCTTCTGCGGCTG | + |
Preference number: 6 (lower is better) Translates to: YSGKDSLYPPGQGQK*SKSLRILTVDLLRL Trigger: CAGCCGCAGAAGATCAACAGTGAGAATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGCCCGGTGGATACAGACTGTCCTTGCCAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | AAGATGGTCCTGAGGATGTACATCATAACATCACAGCTGAGCAGGTaGACTACTTTGCTGAAAGCAGGGCAGAACTCCGGAGGAGGTGGC | + |
Preference number: 6 (lower is better) Translates to: KMVLRMYIITSQLSR*TTLLKAGQNSGGGG Trigger: GCCACCTCCTCCGGAGTTCTGCCCTGCTTTCAGCAAAGTAGTCAACCTGCTCAGCTGTGATGTTATGATGTACATCCTCAGGACCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | AGGACAGTCTGTATCCACCGGGCCAAGGTCAAAAGTTaGGCAAGAGCCTCCGCATTCTCACTGTTGATCTTC | + |
Preference number: 6 (lower is better) Translates to: RTVCIHRAKVKS*ARASAFSLLIF Trigger: GAAGATCAACAGTGAGAATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGCCCGGTGGATACAGACTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | GGCTTCCCTCTGTGCTGGGTTAGGGCGGTGGATTTCTaGACACATGCTGACAATACCATGGCGTTATTTTCT | + |
Preference number: 6 (lower is better) Translates to: GFPLCWVRAVDF*THADNTMALFS Trigger: AGAAAATAACGCCATGGTATTGTCAGCATGTGTGCAGAAATCCACCGCCCTAACCCAGCACAGAGGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | AGAGCCTCCGCATTCTCACTGTTGATCTTCTGCGGCTaGAAAGGGATGATGGGGATGACAGTATTGCAGAGA | + |
Preference number: 6 (lower is better) Translates to: RASAFSLLIFCG*KGMMGMTVLQR Trigger: TCTCTGCAATACTGTCATCCCCATCATCCCTTTGCAGCCGCAGAAGATCAACAGTGAGAATGCGGAGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | TACATCATAACATCACAGCTGAGCAGGTTGACTACTTaGCTGAAAGCAGGGCAGAACTCCGGAGGAGGTGGC | + |
Preference number: 6 (lower is better) Translates to: YIITSQLSRLTT*LKAGQNSGGGG Trigger: GCCACCTCCTCCGGAGTTCTGCCCTGCTTTCAGCAAAGTAGTCAACCTGCTCAGCTGTGATGTTATGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | ACCAAATGCAGCTTCCGATACCGCTCCCGAGATAAATaGAGTGGGTTTCCTCTCTTTAGCCCTGGGTCTGTT | + |
Preference number: 6 (lower is better) Translates to: TKCSFRYRSRDK*SGFPLFSPGSV Trigger: AACAGACCCAGGGCTAAAGAGAGGAAACCCACTTCATTTATCTCGGGAGCGGTATCGGAAGCTGCATTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CATCCCTTCTGTCCACAGATTAGACTCCATGTCCACTaGCCGCTCAAAGATGGTCCTGAGGATGTACATCAT | + |
Preference number: 6 (lower is better) Translates to: HPFCPQIRLHVH*PLKDGPEDVHH Trigger: ATGATGTACATCCTCAGGACCATCTTTGAGCGGGCAGTGGACATGGAGTCTAATCTGTGGACAGAAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | AAGGACAGTCTGTATCCACCGGGCCAAGGTCAAAAGTaGAGCAAGAGCCTCCGCATTCTCACTGTTGATCTT | + |
Preference number: 6 (lower is better) Translates to: KDSLYPPGQGQK*SKSLRILTVDL Trigger: AAGATCAACAGTGAGAATGCGGAGGCTCTTGCTCAACTTTTGACCTTGGCCCGGTGGATACAGACTGTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | GGGTACCTGACCACAGCACTTTTCTGCTTCAAAGACTaGAGTAAGGCAGGATCTCCACACCACCTCTGTAGT | + |
Preference number: 6 (lower is better) Translates to: GYLTTALFCFKD*SKAGSPHHLCS Trigger: ACTACAGAGGTGGTGTGGAGATCCTGCCTTACTCAAGTCTTTGAAGCAGAAAAGTGCTGTGGTCAGGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | CTGTATAGCGATGGCAGCCTCCCAGTCAGGGTCCACTTCAATGTGTaGTCCAACTTGTCTTCTGATTTCTTCCATTCCCTGCATACAGGT | + |
Preference number: 6 (lower is better) Translates to: LYSDGSLPVRVHFNV*SNLSSDFFHSLHTG Trigger: ACCTGTATGCAGGGAATGGAAGAAATCAGAAGACAAGTTGGACAACACATTGAAGTGGACCCTGACTGGGAGGCTGCCATCGCTATACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | CTGAGGATGTACATCATAACATCACAGCTGAGCAGGTaGACTACTTTGCTGAAAGCAGGGCAGAACTCCGGA | + |
Preference number: 6 (lower is better) Translates to: LRMYIITSQLSR*TTLLKAGQNSG Trigger: TCCGGAGTTCTGCCCTGCTTTCAGCAAAGTAGTCAACCTGCTCAGCTGTGATGTTATGATGTACATCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | CTTTTTCTAGGGTACCTGACCACAGCACTTTTCTGCTTCAAAGACTaGAGTAAGGCAGGATCTCCACACCACCTCTGTAGTAAGGGCCTT | + |
Preference number: 6 (lower is better) Translates to: LFLGYLTTALFCFKD*SKAGSPHHLCSKGL Trigger: AAGGCCCTTACTACAGAGGTGGTGTGGAGATCCTGCCTTACTCAAGTCTTTGAAGCAGAAAAGTGCTGTGGTCAGGTACCCTAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | GATGGCAGCCTCCCAGTCAGGGTCCACTTCAATGTGTTGTCCAACTaGTCTTCTGATTTCTTCCATTCCCTGCATACAGGTAAGAATCTT | + |
Preference number: 6 (lower is better) Translates to: DGSLPVRVHFNVLSN*SSDFFHSLHTGKNL Trigger: AAGATTCTTACCTGTATGCAGGGAATGGAAGAAATCAGAAGACAAGTTGGACAACACATTGAAGTGGACCCTGACTGGGAGGCTGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | GGGCGGTTATGGAGATGCTTCTCTCGTGGTCGTCGCTaGTGTACTCTTTCTGCAGCTGTTTATAATACTTCA | + |
Preference number: 6 (lower is better) Translates to: GRLWRCFSRGRR*CTLSAAVYNTS Trigger: TGAAGTATTATAAACAGCTGCAGAAAGAGTACATCAGCGACGACCACGAGAGAAGCATCTCCATAACCGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | TTCCTGTATAAGTTCCATGTGCCAAGTCTGGATCCATaGAAAGAGGGTCCAGTGTTTCCCCTAAGTGGTCCA | + |
Preference number: 6 (lower is better) Translates to: FLYKFHVPSLDP*KEGPVFPLSGP Trigger: TGGACCACTTAGGGGAAACACTGGACCCTCTTTTCATGGATCCAGACTTGGCACATGGAACTTATACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CACCACTCTTGGAACATGAGCAAAATATTCTTTAGTTaGATCTGTATAGCGATGGCAGCCTCCCAGTCAGGG | + |
Preference number: 6 (lower is better) Translates to: HHSWNMSKIFFS*ICIAMAASQSG Trigger: CCCTGACTGGGAGGCTGCCATCGCTATACAGATGCAACTAAAGAATATTTTGCTCATGTTCCAAGAGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | CCTGAAGACAGATCTGTATCTGTTGTAAGGAGTATCTaGAGCATGTGCGCCATGGTGATCAGATGGAAGAGA | + |
Preference number: 6 (lower is better) Translates to: PEDRSVSVVRSI*SMCAMVIRWKR Trigger: TCTCTTCCATCTGATCACCATGGCGCACATGCTTCAGATACTCCTTACAACAGATACAGATCTGTCTTCAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | AGAATCTTCAGAAAAGACCGGAAACCTTCCAGGAACTaGGCTCTTAATCGTTCTGTCCATATGACAGGCTTG | + |
Preference number: 6 (lower is better) Translates to: RIFRKDRKPSRN*ALNRSVHMTGL Trigger: CAAGCCTGTCATATGGACAGAACGATTAAGAGCGCAGTTCCTGGAAGGTTTCCGGTCTTTTCTGAAGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CATTACATGACCACAGCTTCCTGTATAAGTTCCATGTaGCAAGTCTGGATCCATGAAAAGAGGGTCCAGTGT | + |
Preference number: 6 (lower is better) Translates to: HYMTTASCISSM*QVWIHEKRVQC Trigger: ACACTGGACCCTCTTTTCATGGATCCAGACTTGGCACATGGAACTTATACAGGAAGCTGTGGTCATGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | CCAGGACCACCCTGCATTCTCGGATTTTTAAGAAAATaGAGACTCCAGCACCACAATGAAGCGCATGAAAAA | + |
Preference number: 6 (lower is better) Translates to: PGPPCILGFLRK*RLQHHNEAHEK Trigger: TTTTTCATGCGCTTCATTGTGGTGCTGGAGTCTGCATTTTCTTAAAAATCCGAGAATGCAGGGTGGTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | CAGGATCTCCACACCACCTCTGTAGTAAGGGCCTTATaGTATCCCAATATTCCTGGAAAAGCAGGAACAAAT | + |
Preference number: 6 (lower is better) Translates to: QDLHTTSVVRAL*YPNIPGKAGTN Trigger: ATTTGTTCCTGCTTTTCCAGGAATATTGGGATACCATAAGGCCCTTACTACAGAGGTGGTGTGGAGATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | GGAAGCAGTCCATACAGAGCACACACGTTGGATCAATaGCACAATCCCTACAGGAATATGTTGTTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: GSSPYRAHTLDQ*HNPYRNMLFLH Trigger: GTGGAGAAACAACATATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS GCA 72 bp | TTTCTTTTTCTAGGGTACCTGACCACAGCACTTTTCTaGTTCAAAGACTTGAGTAAGGCAGGATCTCCACAC | + |
Preference number: 6 (lower is better) Translates to: FLFLGYLTTALF*FKDLSKAGSPH Trigger: GTGTGGAGATCCTGCCTTACTCAAGTCTTTGAAGCAGAAAAGTGCTGTGGTCAGGTACCCTAGAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | CACTACTTTGGAAGCAGTCCATACAGAGCACACACGTaGGATCAATTGCACAATCCCTACAGGAATATGTTG | + |
Preference number: 6 (lower is better) Translates to: HYFGSSPYRAHT*DQLHNPYRNML Trigger: CAACATATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | CCGGATCCTCTCCAAATAAGTACCACTCCAAAGGAGTaGGTATTGACATCTGTACACTCTCTTCTTGCTTTT | + |
Preference number: 6 (lower is better) Translates to: PDPLQISTTPKE*VLTSVHSLLAF Trigger: AAAAGCAAGAAGAGAGTGTACAGATGTCAATACTCACTCCTTTGGAGTGGTACTTATTTGGAGAGGATCCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | TTTAACATCTTGATAATAGAAAACCTGGCTGATGAGTaGGAGCCCGTTTCTTCGCCACATCTCAGCAACAAC | + |
Preference number: 6 (lower is better) Translates to: FNILIIENLADE*EPVSSPHLSNN Trigger: GTTGTTGCTGAGATGTGGCGAAGAAACGGGCTCTCACTCATCAGCCAGGTTTTCTATTATCAAGATGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | ATGGCACTATGTGGCATGGGCTCAATGCAAAGTAAGTaGGTAATCTCTCTCATTATAACCTCCTCTCTGGTA | + |
Preference number: 6 (lower is better) Translates to: MALCGMGSMQSK*VISLIITSSLV Trigger: TACCAGAGAGGAGGTTATAATGAGAGAGATTACTCACTTACTTTGCATTGAGCCCATGCCACATAGTGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | ACTACTTTGGAAGCAGTCCATACAGAGCACACACGTTaGATCAATTGCACAATCCCTACAGGAATATGTTGT | + |
Preference number: 6 (lower is better) Translates to: TTLEAVHTEHTR*INCTIPTGICC Trigger: ACAACATATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | TTTCATTATTTTCGTTCTCAGGTAGGTTTCTGGCGATaGCACTATGTGGCATGGGCTCAATGCAAAGTAAGT | + |
Preference number: 6 (lower is better) Translates to: FHYFRSQVGFWR*HYVAWAQCKVS Trigger: ACTTACTTTGCATTGAGCCCATGCCACATAGTGCCATCGCCAGAAACCTACCTGAGAACGAAAATAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | GAGTCTTCCTTCCCTGTTACTTCTGACGTATTATCATACATGAGTTaGTGGGTTTCAATGAAGTTTTTCTGTAAGGCAGACATCTGGGCC | + |
Preference number: 6 (lower is better) Translates to: ESSFPVTSDVLSYMS*WVSMKFFCKADIWA Trigger: GGCCCAGATGTCTGCCTTACAGAAAAACTTCATTGAAACCCACAAACTCATGTATGATAATACGTCAGAAGTAACAGGGAAGGAAGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | ATCCCCCATTCCTTGATTAAACAAGACAGGAACTGCTaGGGCTTCTCCTTTAGCATGCTTTATATTATAACC | + |
Preference number: 6 (lower is better) Translates to: IPHSLIKQDRNC*GFSFSMLYIIT Trigger: GGTTATAATATAAAGCATGCTAAAGGAGAAGCCCCAGCAGTTCCTGTCTTGTTTAATCAAGGAATGGGGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | ATGCATCTTGTAACGATGGTTTTTATGAACACTACTTaGGAAGCAGTCCATACAGAGCACACACGTTGGATC | + |
Preference number: 6 (lower is better) Translates to: MHLVTMVFMNTT*EAVHTEHTRWI Trigger: GATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGTGTTCATAAAAACCATCGTTACAAGATGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | GGATCAATTGCACAATCCCTACAGGAATATGTTGTTTCTCCACTTTaGAAAACCTTCCCACACAACTGGAACGCTCCACTGTGTTTTAAT | + |
Preference number: 6 (lower is better) Translates to: GSIAQSLQEYVVSPL*KTFPHNWNAPLCFN Trigger: ATTAAAACACAGTGGAGCGTTCCAGTTGTGTGGGAAGGTTTTCAAAAGTGGAGAAACAACATATTCCTGTAGGGATTGTGCAATTGATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | TTTTATGAACACTACTTTGGAAGCAGTCCATACAGAGCACACACGTaGGATCAATTGCACAATCCCTACAGGAATATGTTGTTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: FYEHYFGSSPYRAHT*DQLHNPYRNMLFLH Trigger: GTGGAGAAACAACATATTCCTGTAGGGATTGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGTGTTCATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 90 bp | AGTAGAAGTATGCATCTTGTAACGATGGTTTTTATGAACACTACTTaGGAAGCAGTCCATACAGAGCACACACGTTGGATCAATTGCACA | + |
Preference number: 6 (lower is better) Translates to: SRSMHLVTMVFMNTT*EAVHTEHTRWINCT Trigger: TGTGCAATTGATCCAACGTGTGTGCTCTGTATGGACTGCTTCCAAAGTAGTGTTCATAAAAACCATCGTTACAAGATGCATACTTCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | ATGTATTTTATCACCGAAGGGAATATTCTCCTGGCTTaGGCAATCACCTCTTCATTCAATGGGCAATGTAAG | + |
Preference number: 6 (lower is better) Translates to: MYFITEGNILLA*AITSSFNGQCK Trigger: CTTACATTGCCCATTGAATGAAGAGGTGATTGCTCAAGCCAGGAGAATATTCCCTTCGGTGATAAAATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | CTCTTCCCAGTTTGTCCTGGCTATAACCCTGGAAGTTaGATTTATTGTTCCTGTCCAAGTATTCAGGTAAAA | + |
Preference number: 6 (lower is better) Translates to: LFPVCPGYNPGS*IYCSCPSIQVK Trigger: TTTTACCTGAATACTTGGACAGGAACAATAAATTCAACTTCCAGGGTTATAGCCAGGACAAACTGGGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CCA 72 bp | CTCTGTAGTAAGGGCCTTATGGTATCCCAATATTCCTaGAAAAGCAGGAACAAATTTGTGGGTAAAGATAGA | + |
Preference number: 6 (lower is better) Translates to: LCSKGLMVSQYS*KSRNKFVGKDR Trigger: TCTATCTTTACCCACAAATTTGTTCCTGCTTTTCCAGGAATATTGGGATACCATAAGGCCCTTACTACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | TTTGTAGGATTTGGTTTCCAGACTATGACCGCACAATaGCACTACTGTCTTGGTACTGGACATGAAATTTGT | + |
Preference number: 6 (lower is better) Translates to: FVGFGFQTMTAQ*HYCLGTGHEIC Trigger: ACAAATTTCATGTCCAGTACCAAGACAGTAGTGCAATTGTGCGGTCATAGTCTGGAAACCAAATCCTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | TGGCCCGACACACCTGGTTTCTTAAATGTGGCCACTTaGTTTATGACATTCTCTAAGCCAGTTTCATTATTT | + |
Preference number: 6 (lower is better) Translates to: WPDTPGFLNVAT*FMTFSKPVSLF Trigger: AAATAATGAAACTGGCTTAGAGAATGTCATAAACAAAGTGGCCACATTTAAGAAACCAGGTGTGTCGGGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | TGTAGATCACATGATCATACGAATGGTGCTCATCGTTaGAAAGGACACAATAGTATCGTTCATTTTTCTCCC | + |
Preference number: 6 (lower is better) Translates to: CRSHDHTNGAHR*KGHNSIVHFSP Trigger: GGGAGAAAAATGAACGATACTATTGTGTCCTTTTCAACGATGAGCACCATTCGTATGATCATGTGATCTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | AATTTGTGGGTAAAGATAGATAGCTACAGAGTGCACTaGATTCTCCTTCAGCAGAATTGGCAAACAGTTCTT | + |
Preference number: 6 (lower is better) Translates to: NLWVKIDSYRVH*ILLQQNWQTVL Trigger: AAGAACTGTTTGCCAATTCTGCTGAAGGAGAATTCAGTGCACTCTGTAGCTATCTATCTTTACCCACAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | AACTGCGCTCTTAATCGTTCTGTCCATATGACAGGCTaGCTAATCAGGATATACTTTAGGTCACATATAACT | + |
Preference number: 6 (lower is better) Translates to: NCALNRSVHMTG*LIRIYFRSHIT Trigger: AGTTATATGTGACCTAAAGTATATCCTGATTAGCAAGCCTGTCATATGGACAGAACGATTAAGAGCGCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS TCA 72 bp | CCACTCCAGGTACATAACGTTCTCCCACAATATAGATaGGGACCTGAAGCATTTCTTCTATTAATGTATTAT | + |
Preference number: 6 (lower is better) Translates to: PLQVHNVLPQYR*GPEAFLLLMYY Trigger: ATAATACATTAATAGAAGAAATGCTTCAGGTCCTCATCTATATTGTGGGAGAACGTTATGTACCTGGAGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |
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CDS CAA 72 bp | TTCCCTGTTACTTCTGACGTATTATCATACATGAGTTaGTGGGTTTCAATGAAGTTTTTCTGTAAGGCAGAC | + |
Preference number: 6 (lower is better) Translates to: FPVTSDVLSYMS*WVSMKFFCKAD Trigger: GTCTGCCTTACAGAAAAACTTCATTGAAACCCACAAACTCATGTATGATAATACGTCAGAAGTAACAGGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028728.6 |