Pregenerated sensors for UBQLN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008604Ensembl transcript IDs: ENSMUST00000008748.8, ENSMUST00000192962.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGGCGGGGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTaGCAAGGTACTTGTGGGCAAGGAGATGTGGCCAAACTGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: ARRGPPLSPLEKNVC*QGTCGQGDVAKLAH Trigger: GTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACCCCGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | ATGCCTTTCCTTACCTGTCTCTCAGCCAGGGGTCCTCCAAGTACCTaGACCACACAGCAGAGAAAATGTGGCGAGAGCTTCCTCTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: MPFLTCLSARGPPST*TTQQRKCGESFLWY Trigger: GTACCAGAGGAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCTGGCTGAGAGACAGGTAAGGAAAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR GCA 90 bp | TCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATaGTATAGTCTTCCACAAGATTGGCCCTTGTACCCACTTATCTCT | + |
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Preference number: 1 (lower is better) Translates to: SGYPIPRGPGTRLPQ*YSLPQDWPLYPLIS Trigger: AGAGATAAGTGGGTACAAGGGCCAATCTTGTGGAAGACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR GCA 90 bp | CAGGGTACCAGTCAGAGCCATTATTGCTCAGAGAATTACTCAATCTaGTTTCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: QGTSQSHYCSENYSI*FLVTQYPEAQGPGS Trigger: GGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGTAATTCTCTGAGCAATAATGGCTCTGACTGGTACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | CCAGTCAGAGCCATTATTGCTCAGAGAATTACTCAATCTGCTTTCTaGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATG | + |
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Preference number: 1 (lower is better) Translates to: PVRAIIAQRITQSAF*LPNTQRPRDPAPSM Trigger: CATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGTAATTCTCTGAGCAATAATGGCTCTGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | TCCTCTCAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTTGTaGGCAAGGAGATGTGGCCAAACTGGCACACTGTGCACACTAGAT | + |
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Preference number: 1 (lower is better) Translates to: SSQSPGEECMLPRYL*ARRCGQTGTLCTLD Trigger: ATCTAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | AGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCTTCCTCTaGTACTCGTTAAGCAAAGCCCAGTTCCATACCAAAGGCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: STWTTQQRKCGESFL*YSLSKAQFHTKGIC Trigger: GCAGATGCCTTTGGTATGGAACTGGGCTTTGCTTAACGAGTACCAGAGGAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | CAGATCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTaGGTTCATTGGAACGTGAGCGCAAATATGTCTGGAAACAATGGA | + |
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Preference number: 1 (lower is better) Translates to: QIFWRVGLKILEPED*VHWNVSANMSGNNG Trigger: TCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 90 bp | CTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTaGCCAGGGTACCAGTCAGAGCCATTATTGCTCAGAGAATTACTC | + |
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Preference number: 1 (lower is better) Translates to: LWKRNLTILSPRKQW*PGYQSEPLLLRELL Trigger: GAGTAATTCTCTGAGCAATAATGGCTCTGACTGGTACCCTGGCCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCAGCCAGAGCTGCAGGGCTaGACAGGGGCGGCGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSLHLLLQLHKVGGAQAQPELQG*TGAAAG Trigger: ACCTGCCGCCGCCCCTGTCCAGCCCTGCAGCTCTGG...CTGGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGCATGTCTGAACTGTCTGGGACTGTCCCCCACCTACGGCAGGATGCCTGCTGGCGCTGAGAGGTaGGGAAGGCAGGAGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GKACLNCLGLSPTYGRMPAGAER*GRQEAP Trigger: TGGTGCCTCCTGCCTTCCCCACCTCTCAGCGCCAGC...AGGCATCCTGCCGTAGGTGGGGGACAGTCCCAGACAGTTCAGACATGCCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCTTGTATTGCCAGAGCTaGAGGGCTGGACAGGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: SCLCICCCSSIKLAEPRPLYCQS*RAGQGR Trigger: CCGCCCCTGTCCAGCCCTGCAGCTCTGGCAATACAA...GGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCTGCCCAGTCCCAGGATaGCTCCGAAGCCAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SCLCICCCSSIKLAEPRPCPVPG*LRSQRG Trigger: TCCTCTCTGGCTTCGGAGGCATCCTGGGACTGGGCA...GGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGGGTCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCGTTGGGCAGAGGCCTTaGAAGTTGGAAGTCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: ARGPPSTWTTQQRKCGESVGQRP*KLEVTL Trigger: CAGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAAC...GCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCAGAGTCAGGAGTGGATaGAGGAGAAGCAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SCLCICCCSSIKLAEPRPRVRSG*RRSSSS Trigger: ACTGCTGCTGCTTCTCCTCCATCCACTCCTGACTCT...GGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCAGTCCACTGCCAGCATCTaGAGTTGTATTGCCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLHLLLQLHKVGGAQAQSTASI*SCIARA Trigger: AGCTCTGGCAATACAACTTCAGATGCTGGCAGTGGA...CTGGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATGCTATAGTCTTCAGTTGGAAGTCACCCTaGGGTTCTTGCTGCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VTQYPEAQGPGSLNAIVFSWKSP*GSCCSV Trigger: AACAGAGCAGCAAGAACCGCAGGGTGACTTCCAACT...GAAGACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGCTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTGGGTCTCCCCGGGTCCCTaGTTCCGAGAGCTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QELWKRNLTILSPRKQWWVSPGP*FRELSA Trigger: AGCTGAGAGCTCTCGGAAGCAGGGACCCGGGGAGAC...CCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGGGTCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCACTCACTGCTGCCTTTaGACAGAAGGACAGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: ARGPPSTWTTQQRKCGESTHCCL*TEGQAI Trigger: TATAGCCTGTCCTTCTGTCCAAAGGCAGCAGTGAGT...GCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATGCTATAGTCAAACTGGCACACTGTaGACACTAGATAGCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SGYPIPRGPGTRLPQCYSQTGTL*TLDSSA Trigger: AGCAGAGCTATCTAGTGTGCACAGTGTGCCAGTTTG...ACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 90 bp | TCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTaGTGGGCAAGGAGATGTGGCCAAACTGGCACACTGTGCACACTA | + |
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Preference number: 2 (lower is better) Translates to: SSSQSPGEECMLPRY*WARRCGQTGTLCTL Trigger: TAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGATTCTTCTGTCAGGCCTaGGCCTGGCTTCTCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGFFCQA*AWLLHH Trigger: ATGGTGGAGAAGCCAGGCTCAGGCCTGACAGAAGAA...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGAATCCTTGGAGAGCTTTaGGTTGGGCAGAGGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGILGEL*VGQRPW Trigger: CCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGAT...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGATGGAGAGCTTTGGGTTaGGCAGAGGCCTTGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGWRALG*AEALEV Trigger: AACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCA...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATTACTCAATCTGCTTTCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGTGGGGCTCAAAATACTaGAGCCTGAAGACTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: RITQSAFWLPNTQRPRDPWGSKY*SLKTGF Trigger: GAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCA...CGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGTAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 90 bp | TTTCATGAGACAGTAAACGAATCAAAATCCTTGGAGAGCTTTGGGTaGGGCAGAGGCCTTGGAAGTTGGAAGTCACCCTGCGGTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: FHETVNESKSLESFG*GRGLGSWKSPCGSC Trigger: GCAAGAACCGCAGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATTTTGATTCGTTTACTGTCTCATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACCCTACCCAGACTGCTaGCTCACTGCTGCCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VSANMSGNNGANLISHGSPYPDC*LTAAFG Trigger: TCCAAAGGCAGCAGTGAGTCAGCAGTCTGGGTAGGG...TGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCTTCGAGCGCAAATATGTCTaGAAACAATGGAGCCAATTT | + |
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Preference number: 2 (lower is better) Translates to: RGPPSTWTTQQRKCGESFERKYV*KQWSQF Trigger: AAATTGGCTCCATTGTTTCCAGACATATTTGCGCTC...GAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTTCACCCTGCGGTTCTTaGTGCTCTGTTCGTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: ANMSGNNGANLISHGSHCSPCGS*CSVRRG Trigger: ACCCCTACGAACAGAGCAGCAAGAACCGCAGGGTGA...ACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTGTGGGCAAGGAGATGTaGCCAAACTGGCACACTGTG | + |
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Preference number: 2 (lower is better) Translates to: ANMSGNNGANLISHGSHCVGKEM*PNWHTV Trigger: CACAGTGTGCCAGTTTGGCCACATCTCCTTGCCCAC...ACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTGGCACTCAATCTGCTTTCTaGTTACCCAATACCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSSGRETSLFFHQGSNGGTQSAF*LPNTQR Trigger: CCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGT...GCCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAGCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCAGCTTTGCTGAACTTCTATCTTCAGTTCCAAGTCCATCAGACTTTCTTGACCTGGCCAAAGAGTaGGATTCAAACTGGTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFSFAELLSSVPSPSDFLDLAKE*DSNWLG Trigger: GCCCAACCAGTTTGAATCTCACTCTTTGGCCAGGTC...AAGAAAGTCTGATGGACTTGGAACTGAAGATAGAAGTTCAGCAAAGCTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCCCGGGAGAGATTTCATaGGACAGTAAACGAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: RERKYVWKQWSQFDFSWVPGEIS*DSKRIK Trigger: TTTGATTCGTTTACTGTCTCATGAAATCTCTCCCGG...GACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCTCAAATACAAGTTTCTGGCCTAGAGGGAACCAGCAAATAACTGAAAGGCTGGCTTCTCCACCATaGAATCTATTGGTCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LSSNTSFWPRGNQQITERLASPP*NLLVFL Trigger: TAGAAAGACCAATAGATTTCATGGTGGAGAAGCCAG...CCTTTCAGTTATTTGCTGGTTCCCTCTAGGCCAGAAACTTGTATTTGAGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 90 bp | CATTGGAACGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTaGATTTCTCATGGGTCACACTGTTCAGCTTTGCTGAACTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: HWNVSANMSGNNGAN*ISHGSHCSALLNFY Trigger: ATAGAAGTTCAGCAAAGCTGAACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTAGTTTCACCAGGACCTaGCCAAAGAGTGAGATTCAA | + |
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Preference number: 2 (lower is better) Translates to: ANMSGNNGANLISHGSHCSFTRT*PKSEIQ Trigger: TTGAATCTCACTCTTTGGCCAGGTCCTGGTGAAACT...ACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCGCATCTGAAGTTGTATaGCCAGAGCTGCAGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SCLCICCCSSIKLAEPRPASEVV*PELQGW Trigger: CCAGCCCTGCAGCTCTGGCAATACAACTTCAGATGC...GGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCTGCCAGCATCTGAAGTaGTATTGCCAGAGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SCLCICCCSSIKLAEPRPCQHLK*YCQSCR Trigger: CCTGCAGCTCTGGCAATACAACTTCAGATGCTGGCA...GGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR GCA 72 bp | GGGTTGGGCAGAGGCCTTGGAAGTTGGAAGTCACCCTaGGGTTCTTGCTGCTCTGTTCGTAGGGGTCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: GLGRGLGSWKSP*GSCCSVRRGQR Trigger: TCTTTGACCCCTACGAACAGAGCAGCAAGAACCGCAGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR GCA 72 bp | CCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATaGTATAGTCTTCCACAAGATTGGCCCTTGTACCCA | + |
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Preference number: 3 (lower is better) Translates to: PIPRGPGTRLPQ*YSLPQDWPLYP Trigger: TGGGTACAAGGGCCAATCTTGTGGAAGACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 72 bp | GCTGCTCTGTTCGTAGGGGTCAAAGAAGACAGGCCATaGAAGATAGGGCTTCACAGAGGAGCCAGAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AALFVGVKEDRP*KIGLHRGARGW Trigger: CCAGCCTCTGGCTCCTCTGTGAAGCCCTATCTTCCATGGCCTGTCTTCTTTGACCCCTACGAACAGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CAA 90 bp | CCCACCAGATCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTGGAGAGCTTTGGGTaGGGCAGAGGCCTTGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: PTRSSGEWGSKYWSLKTGLESFG*GRGLGS Trigger: ACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAA...CCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGATCTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTCTGCATCTGTTGCTGCAGCTCCATAAAGTTGGCGGAGCCCAGGCCCAGAGCAGTCACTGGATCTaGAGCCTTCTGAGGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LSLHLLLQLHKVGGAQAQSSHWI*SLLRGF Trigger: AAAACCCCTCAGAAGGCTCAAGATCCAGTGACTGCT...CTGGGCCTGGGCTCCGCCAACTTTATGGAGCTGCAGCAACAGATGCAGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192962.2 |
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| 3UTR GCA 72 bp | AGAGGCCTTGGAAGTTGGAAGTCACCCTGCGGTTCTTaGTGCTCTGTTCGTAGGGGTCAAAGAAGACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RGLGSWKSPCGS*CSVRRGQRRQA Trigger: GGCCTGTCTTCTTTGACCCCTACGAACAGAGCAGCAAGAACCGCAGGGTGACTTCCAACTTCCAAGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR GCA 72 bp | TTGTGGGCAAGGAGATGTGGCCAAACTGGCACACTGTaGACACTAGATAGCTCTGCTCCAAGAGGACCGGGA | + |
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Preference number: 3 (lower is better) Translates to: LWARRCGQTGTL*TLDSSAPRGPG Trigger: TCCCGGTCCTCTTGGAGCAGAGCTATCTAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 72 bp | CTTACCTGTCTCTCAGCCAGGGGTCCTCCAAGTACCTaGACCACACAGCAGAGAAAATGTGGCGAGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LTCLSARGPPST*TTQQRKCGESF Trigger: GAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCTGGCTGAGAGACAGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CCA 72 bp | AAAATCCTTGGAGAGCTTTGGGTTGGGCAGAGGCCTTaGAAGTTGGAAGTCACCCTGCGGTTCTTGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KILGELWVGQRP*KLEVTLRFLLL Trigger: GAGCAGCAAGAACCGCAGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTCTGAACTGTCTGGGACTGTCCCCCACCTACGGCAGGATGCCTTTCCTTACACACCTCCCCAACTaGCATGTACGCACACATATA | + |
|
Preference number: 3 (lower is better) Translates to: ACLNCLGLSPTYGRMPFLTHLPN*HVRTHI Trigger: TATATGTGTGCGTACATGCAAGTTGGGGAGGTGTGT...AAGGAAAGGCATCCTGCCGTAGGTGGGGGACAGTCCCAGACAGTTCAGACATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR GCA 72 bp | GGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTaGCAAGGTACTTGTGGGCAAGGAGATGTGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPPLSPLEKNVC*QGTCGQGDVAK Trigger: TTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTTGTaGGCAAGGAGATGTGGCCAAACTGGCACACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPGEECMLPRYL*ARRCGQTGTLC Trigger: GCACAGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TCAGCTGTGGCTCTAGAGCACCAGTGTCCACTGGTCTaGTTTGATCTTGATAACCCTACCCAGACTGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SAVALEHQCPLV*FDLDNPTQTAD Trigger: GTCAGCAGTCTGGGTAGGGTTATCAAGATCAAACCAGACCAGTGGACACTGGTGCTCTAGAGCCACAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | ACAATGCTGAGAAACCCCACCAGATCTTCTGGAGAGTaGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TMLRNPTRSSGE*GSKYWSLKTGF Trigger: GAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGATCTGGTGGGGTTTCTCAGCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | GCCATTATTGCTCAGAGAATTACTCAATCTGCTTTCTaGTTACCCAATACCCAGAGGCCCAGGGACCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AIIAQRITQSAF*LPNTQRPRDPA Trigger: AGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGTAATTCTCTGAGCAATAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTaGCGAGAGCTTCCTCTGGTACTCGTTAAGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSKYLDHTAEKM*RELPLVLVKQS Trigger: GCTTTGCTTAACGAGTACCAGAGGAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGCTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTGGATGTTGCCAAGGTACTaGTGGGCAAGGAGATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QELWKRNLTILSPRKQWWMLPRY*WARRCG Trigger: GCCACATCTCCTTGCCCACAAGTACCTTGGCAACAT...CCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAGCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTGGCGACTCACTGCTGCCTTaGGACAGAAGGACAGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RSSGRETSLFFHQGSNGGDSLLP*DRRTGY Trigger: ATAGCCTGTCCTTCTGTCCAAAGGCAGCAGTGAGTC...GCCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTaGGTTCATTGGAACGTGAGCGCAAATATGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WRVGLKILEPED*VHWNVSANMSG Trigger: TCCAGACATATTTGCGCTCACGTTCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTTCATTGGAACGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTAATCCTTGGAGAGCTTaGGGTTGGGCAGAGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LGSLERERKYVWKQWSQFNPWRA*GWAEAL Trigger: CAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATT...AAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATGAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR TCA 72 bp | CAGTTCCAAGTCCATCAGACTTTCTTCTGTCAGGCCTaGGCCTGGCTTCTCCACCATGAAATCTATTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QFQVHQTFFCQA*AWLLHHEIYWS Trigger: AGACCAATAGATTTCATGGTGGAGAAGCCAGGCTCAGGCCTGACAGAAGAAAGTCTGATGGACTTGGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR TCA 72 bp | GATCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTaGAGACTGGGTTCATTGGAACGTGAGCGCAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: DLLESGAQNTGA*RLGSLERERKY Trigger: ATATTTGCGCTCACGTTCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR GCA 72 bp | TCGTTAAGCAAAGCCCAGTTCCATACCAAAGGCATCTaGCATCCCACCTCTCCTCAAATACAAGTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSKAQFHTKGI*HPTSPQIQVSG Trigger: GCCAGAAACTTGTATTTGAGGAGAGGTGGGATGGCAGATGCCTTTGGTATGGAACTGGGCTTTGCTTAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | ACCACACAGCAGAGAAAATGTGGCGAGAGCTTCCTCTaGTACTCGTTAAGCAAAGCCCAGTTCCATACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTQQRKCGESFL*YSLSKAQFHTK Trigger: TTTGGTATGGAACTGGGCTTTGCTTAACGAGTACCAGAGGAAGCTCTCGCCACATTTTCTCTGCTGTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR GCA 72 bp | AGTCAGAGCCATTATTGCTCAGAGAATTACTCAATCTaGTTTCTGGTTACCCAATACCCAGAGGCCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQSHYCSENYSI*FLVTQYPEAQG Trigger: TCCCTGGGCCTCTGGGTATTGGGTAACCAGAAAGCAGATTGAGTAATTCTCTGAGCAATAATGGCTCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR GCA 72 bp | AGCAATGGTGGCCAGGGTACCAGTCAGAGCCATTATTaGTCAGAGAATTACTCAATCTGCTTTCTGGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: SNGGQGTSQSHY*SENYSICFLVT Trigger: GGTAACCAGAAAGCAGATTGAGTAATTCTCTGAGCAATAATGGCTCTGACTGGTACCCTGGCCACCATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | GGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTaGAACGTGAGCGCAAATATGTCTGGAAACAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLKILEPEDWVH*NVSANMSGNNG Trigger: TCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | ACCCGGCTCCCTCAATGCTATAGTCTTCCACAAGATTaGCCCTTGTACCCACTTATCTCTGTTGACAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TRLPQCYSLPQD*PLYPLISVDKV Trigger: AACTTTGTCAACAGAGATAAGTGGGTACAAGGGCCAATCTTGTGGAAGACTATAGCATTGAGGGAGCCGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR TCA 72 bp | GATAGCTCTGCTCCAAGAGGACCGGGAGAGATTTCATaGGACAGTAAACGAATCAAAATCCTTGGAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DSSAPRGPGEIS*DSKRIKILGEL Trigger: AAGCTCTCCAAGGATTTTGATTCGTTTACTGTCTCATGAAATCTCTCCCGGTCCTCTTGGAGCAGAGCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TCATTGGAACGTGAGCGCAAATATGTCTGGAAACAATaGAGCCAATTTGATTTCTCATGGGTCACACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLERERKYVWKQ*SQFDFSWVTLF Trigger: GAACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CCA 72 bp | TATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATaGGTCACACTGTTCAGCTTTGCTGAACTTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: YVWKQWSQFDFS*VTLFSFAELLS Trigger: AGATAGAAGTTCAGCAAAGCTGAACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGATGTGGCCAAACTGGCACACTGTGCACACTAGATAGCTCTGCTCCACCAGAGCTGCAGGGCTaGACAGGGGCGGCGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARRCGQTGTLCTLDSSAPPELQG*TGAAAG Trigger: ACCTGCCGCCGCCCCTGTCCAGCCCTGCAGCTCTGG...TGGAGCAGAGCTATCTAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATGCTATAGTCACTGGGAGGAGATGTaGCTGGCACGCCCGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGYPIPRGPGTRLPQCYSHWEEM*LARPGK Trigger: CTTCCCCGGGCGTGCCAGCCACATCTCCTCCCAGTG...ACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCCTGCTTCCGAGAGCTCTCAGCTGTGGCTCTAGAGCACCAGTGTCCACTGGCATTTCTGGGCTGTTaGACATCCCTGACCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPCFRELSAVALEHQCPLAFLGC*TSLTPG Trigger: GCCTGGGGTCAGGGATGTTCAACAGCCCAGAAATGC...CAGTGGACACTGGTGCTCTAGAGCCACAGCTGAGAGCTCTCGGAAGCAGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | GCATGTCTGAACTGTCTGGGACTGTCCCCCACCTACGGCAGGATGCCTTTCCTTCAAAGGAGCCAAGGCTaGGTACCAGCCCAGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACLNCLGLSPTYGRMPFLQRSQG*VPAQGL Trigger: AAGCCCCTGGGCTGGTACCCAGCCTTGGCTCCTTTG...AAGGAAAGGCATCCTGCCGTAGGTGGGGGACAGTCCCAGACAGTTCAGACATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCTTCCCATCCTTGATGCCGTaGTGGCTCAGGGTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPPSTWTTQQRKCGESFPSLMP*WLRVSP Trigger: TGGGGACACCCTGAGCCAGCACGGCATCAAGGATGG...GAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTTCCGAGAGCTCTCAGCTGTGGCTCTAGAGCACCAGTGTCCACTGGTCCTCTCCATCAGCTGCTaGATCTGGGGATTAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PCFRELSAVALEHQCPLVLSISC*IWGLAM Trigger: CATGGCTAATCCCCAGATGCAGCAGCTGATGGAGAG...GACCAGTGGACACTGGTGCTCTAGAGCCACAGCTGAGAGCTCTCGGAAGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTTCCGAGAGCTCTCAGCTGTGGCTCTAGAGCACCAGTGTCCACTGGTCGCAAGCTCCATTGTCTaGCTCATGAGCTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFRELSAVALEHQCPLVASSIV*LMSSGL Trigger: CAACCCAGAGCTCATGAGGCAGACAATGGAGCTTGC...GACCAGTGGACACTGGTGCTCTAGAGCCACAGCTGAGAGCTCTCGGAAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTTCCGAGAGCTCTCAGCTGTGGCTCTAGAGCACCAGTGTCCACTGGTCAGAGTCAGGAGTGGATaGAGGAGAAGCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCFRELSAVALEHQCPLVRVRSG*RRSSSS Trigger: ACTGCTGCTGCTTCTCCTCCATCCACTCCTGACTCT...GACCAGTGGACACTGGTGCTCTAGAGCCACAGCTGAGAGCTCTCGGAAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGTCCTCCAAGTACCTGGACCACACAGCAGAGAAAATGTGGCGAGAGCTTCCTGCTCCTGAAGCTGTaGATTCCCTGCGAACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPPSTWTTQQRKCGESFLLLKL*IPCEQR Trigger: CCGCTGTTCGCAGGGAATCCACAGCTTCAGGAGCAG...GAAGCTCTCGCCACATTTTCTCTGCTGTGTGGTCCAGGTACTTGGAGGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTGATCTTGATAACCCTACCCAGACTGCTGACTCACTGCTGCCTTTGGACCGCCCGGGGAAGAAGTaGGGGCCTCTGCCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WFDLDNPTQTADSLLPLDRPGKK*GPLPKI Trigger: GATCTTCGGCAGAGGCCCCCACTTCTTCCCCGGGCG...GTCCAAAGGCAGCAGTGAGTCAGCAGTCTGGGTAGGGTTATCAAGATCAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | GCATGTCTGAACTGTCTGGGACTGTCCCCCACCTACGGCAGGATGCCTTTCCTTGACATGAGCTGTCTCTaGATCTGTTGCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACLNCLGLSPTYGRMPFLDMSCL*ICCCSS Trigger: GGAGCTGCAGCAACAGATGCAGAGACAGCTCATGTC...AAGGAAAGGCATCCTGCCGTAGGTGGGGGACAGTCCCAGACAGTTCAGACATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTTGTGGGGGGTTTTGCATCTGCTaGAGAAACACGGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPPLSPLEKNVCCQGTCGGFCIC*RNTGSC Trigger: GCAGCTCCCCGTGTTTCTGCAGCAGATGCAAAACCC...CCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CAA 72 bp | GGGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTaGCCAAGGTACTTGTGGGCAAGGAGATGTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSQSPGEECM*PRYLWARRCGQ Trigger: TTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | CCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATGCTATAGTCTTCCACAAAAGAGAAGGGATTGTTaGCAAACTGTTCCCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIPRGPGTRLPQCYSLPQKRRDC*QTVPEQ Trigger: CTGCTCGGGAACAGTTTGGCAACAATCCCTTCTCTT...TTGTGGAAGACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGATGTGGCCAAACTGGCACACTGTGCACACTAGATAGCTCTGCTCCATCAGTCCGAAGAGGTTaGGAGGATGAGTTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRCGQTGTLCTLDSSAPSVRRG*EDELSE Trigger: CTCCGACAACTCATCCTCCCAACCTCTTCGGACTGA...TGGAGCAGAGCTATCTAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CAA 72 bp | CAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTaGTGGGCAAGGAGATGTGGCCAAACTGGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPGEECMLPRY*WARRCGQTGTL Trigger: CAGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTTGTGGGTCCACTGCCAGCATCTaGAGTTGTATTGCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPPLSPLEKNVCCQGTCGSTASI*SCIARA Trigger: AGCTCTGGCAATACAACTTCAGATGCTGGCAGTGGA...CCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGACCAAGGGGTTCTCCATaGTCTGCGACAGCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGPRGSP*SATASQ Trigger: CTGAGATGCTGTCGCAGATCATGGAGAACCCCTTGG...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGTTACCCAATACCCAGAGGCCCAGGGACCCGGCTCCCTCAATGCTATAGTTTTTCAGAAATCTGCTaGAGGAGCGCCTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGYPIPRGPGTRLPQCYSFSEIC*RSACIS Trigger: AGAAATGCAGGCGCTCCTCCAGCAGATTTCTGAAAA...ACTATAGCATTGAGGGAGCCGGGTCCCTGGGCCTCTGGGTATTGGGTAACCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGATGCTGCATGAGTTGTTaGTGGGCATTGGAACCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGCCMSC*WALEPA Trigger: TGCGGGTTCCAATGCCCAGCAACAACTCATGCAGCA...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGAGAGTGGGGCTCAAAATACTGGAGCCTGAAGACTGGGTTCATTGGATGCATGAGTTGTTGCTaGGCATTGGAACCCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGEWGSKYWSLKTGFIGCMSCC*ALEPAL Trigger: CAGTGCGGGTTCCAATGCCCAGCAACAACTCATGCA...TCCAATGAACCCAGTCTTCAGGCTCCAGTATTTTGAGCCCCACTCTCCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| 3UTR CAA 72 bp | ACAGTAAACGAATCAAAATCCTTGGAGAGCTTTGGGTaGGGCAGAGGCCTTGGAAGTTGGAAGTCACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVNESKSLESFG*GRGLGSWKSPC Trigger: GCAGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATTTTGATTCGTTTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATGTTGCCAAGGTACTTGTGGGCAAGGAGATGTGGCCAAACTGGCACACTTCTCAGGATTGGACATaGGCTGTCTCTGCATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MYVAKVLVGKEMWPNWHTSQDWT*AVSASV Trigger: AACAGATGCAGAGACAGCTCATGTCCAATCCTGAGA...AGTGTGCCAGTTTGGCCACATCTCCTTGCCCACAAGTACCTTGGCAACATACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCAGCTTTGCTGAACTTCTATCTTCAGTTCCAAGTCCATCAGACTTTCTTTTGTATTGCCAGAGCTaGAGGGCTGGACAGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSFAELLSSVPSPSDFLLYCQS*RAGQGR Trigger: CCGCCCCTGTCCAGCCCTGCAGCTCTGGCAATACAA...AAGAAAGTCTGATGGACTTGGAACTGAAGATAGAAGTTCAGCAAAGCTGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTTGCCCAGTCCCAGGATaGCTCCGAAGCCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANMSGNNGANLISHGSHCCPVPG*LRSQRG Trigger: TCCTCTCTGGCTTCGGAGGCATCCTGGGACTGGGCA...ACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCTCTGGAAGAGAAACCTCACTATTCTTTCACCAAGGAAGCAATGGTGGGATGGAGAGAGACTCTaGGTTTTGCATCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QELWKRNLTILSPRKQWWDGERL*VLHLLQ Trigger: CTGCAGCAGATGCAAAACCCAGAGTCTCTCTCCATC...CCACCATTGCTTCCTTGGTGAAAGAATAGTGAGGTTTCTCTTCCAGAGCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CCA 90 bp | ATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTTCAGCTGGGTTGTTGAGCATGTaGCTGATCTCGGGGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: MSGNNGANLISHGSHCSAGLLSM*LISGFL Trigger: GAGGAACCCCGAGATCAGCCACATGCTCAACAACCC...AGCTGAACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CCA 90 bp | ACGAATCAAAATCCTTGGAGAGCTTTGGGTTGGGCAGAGGCCTTGGAAGTTGGATCATTTCTTGCATCATaGCTGGGTTACGAGCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: TNQNPWRALGWAEALEVGSFLAS*LGYEQA Trigger: AGCTTGCTCGTAACCCAGCCATGATGCAAGAAATGA...TCCAACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATTTTGATTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTTCATTGGAACGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTACATTCACCATCATCTaGGCAGCAAAGTCAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGSLERERKYVWKQWSQFTFTII*AAKSGF Trigger: GAACCCTGACTTTGCTGCTCAGATGATGGTGAATGT...AAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACGTTCCAATGAACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR GCA 90 bp | CGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCAGAGACTCTGGGTTTTaGATCTGCTGCAGAAACACG | + |
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Preference number: 4 (lower is better) Translates to: RERKYVWKQWSQFDFSWVRDSGF*ICCRNT Trigger: CGTGTTTCTGCAGCAGATGCAAAACCCAGAGTCTCT...GACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CCA 90 bp | AGTTCCATACCAAAGGCATCTGCCATCCCACCTCTCCTCAAATACAAGTTTCTGTTAGCCATGATCATGTaGCGCATCAGATCAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SSIPKASAIPPLLKYKFLLAMIM*RIRSGF Trigger: AAACCCTGATCTGATGCGCCACATGATCATGGCTAA...CAGAAACTTGTATTTGAGGAGAGGTGGGATGGCAGATGCCTTTGGTATGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 72 bp | GAGAGATTTCATGAGACAGTAAACGAATCAAAATCCTaGGAGAGCTTTGGGTTGGGCAGAGGCCTTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ERFHETVNESKS*ESFGLGRGLGS Trigger: ACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATTTTGATTCGTTTACTGTCTCATGAAATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR GCA 90 bp | CGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCTGTCTCTGCATCTGTTaGTGCAGCTCCATAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RERKYVWKQWSQFDFSWVCLCIC*CSSIKL Trigger: CAACTTTATGGAGCTGCAGCAACAGATGCAGAGACA...GACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 72 bp | GTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTaGATTTCTCATGGGTCACACTGTTCAGCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSANMSGNNGAN*ISHGSHCSALL Trigger: CAGCAAAGCTGAACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| 3UTR CAA 72 bp | GCCAATTTGATTTCTCATGGGTCACACTGTTCAGCTTaGCTGAACTTCTATCTTCAGTTCCAAGTCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: ANLISHGSHCSA*LNFYLQFQVHQ Trigger: CTGATGGACTTGGAACTGAAGATAGAAGTTCAGCAAAGCTGAACAGTGTGACCCATGAGAAATCAAATTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | AATCCTTGGAGAGCTTTGGGTTGGGCAGAGGCCTTGGAAGTTGGAAGTCACCCTTGCAGCTCCATAAAGTaGGCGGAGCCCAGGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NPWRALGWAEALEVGSHPCSSIK*AEPRPR Trigger: CCTGGGCCTGGGCTCCGCCAACTTTATGGAGCTGCA...AGGGTGACTTCCAACTTCCAAGGCCTCTGCCCAACCCAAAGCTCTCCAAGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | GCATGTCTGAACTGTCTGGGACTGTCCCCCACCTACGGCAGGATGCCTTTCCTTGCATCTGAAGTTGTATaGCCAGAGCTGCAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ACLNCLGLSPTYGRMPFLASEVV*PELQGW Trigger: CCAGCCCTGCAGCTCTGGCAATACAACTTCAGATGC...AAGGAAAGGCATCCTGCCGTAGGTGGGGGACAGTCCCAGACAGTTCAGACATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGAGATGTGGCCAAACTGGCACACTGTGCACACTAGATAGCTCTGCTCCATGCCAGCATCTGAAGTaGTATTGCCAGAGCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ARRCGQTGTLCTLDSSAPCQHLK*YCQSCR Trigger: CCTGCAGCTCTGGCAATACAACTTCAGATGCTGGCA...TGGAGCAGAGCTATCTAGTGTGCACAGTGTGCCAGTTTGGCCACATCTCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | GGTCCTCCTCTCAGTCCCCTGGAGAAGAATGTATGTTGCCAAGGTACTTGTGGGAGCAGTCACTGGATCTaGAGCCTTCTGAGGGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GPPLSPLEKNVCCQGTCGSSHWI*SLLRGF Trigger: AAAACCCCTCAGAAGGCTCAAGATCCAGTGACTGCT...CCCACAAGTACCTTGGCAACATACATTCTTCTCCAGGGGACTGAGAGGAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | CGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACTGTGAGCCCATCCTaGATGCCGTGCTGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RERKYVWKQWSQFDFSWVTVSPS*MPCWLR Trigger: CCTGAGCCAGCACGGCATCAAGGATGGGCTCACAGT...GACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | CGTGAGCGCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCAGTTGTTGCTGGGCATaGGAACCCGCACTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RERKYVWKQWSQFDFSWVSCCWA*EPALGG Trigger: TCCTCCCAGTGCGGGTTCCAATGCCCAGCAACAACT...GACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGCGCTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | CTGTTCAGCTTTGCTGAACTTCTATCTTCAGTTCCAAGTCCATCAGACTTTCTTCGGGAGATCTCCTCCTaGAACTCCTTGACCGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LFSFAELLSSVPSPSDFLREISS*NSLTEA Trigger: AGCCTCGGTCAAGGAGTTCAAGGAGGAGATCTCCCG...AAGAAAGTCTGATGGACTTGGAACTGAAGATAGAAGTTCAGCAAAGCTGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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| CDS-3UTR CAA 90 bp | GCAAATATGTCTGGAAACAATGGAGCCAATTTGATTTCTCATGGGTCACACTGTGACAGCATCTCAGGATaGGACATGAGCTGTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ANMSGNNGANLISHGSHCDSISG*DMSCLC Trigger: GCAGAGACAGCTCATGTCCAATCCTGAGATGCTGTC...ACAGTGTGACCCATGAGAAATCAAATTGGCTCCATTGTTTCCAGACATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008748.8 |
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