Pregenerated sensors for UBQLN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051618Ensembl transcript IDs: ENSMUST00000057254.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGTCAGGCACAGTTGGATTACACAGCATCCCCACCCTATTTCTaGCTTCTCATCTTCCTTATTGACTCCAGAACATTGTCTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: ECQAQLDYTASPPYF*LLIFLIDSRTLSPQ Trigger: CTGTGGAGACAATGTTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATCCAACTGTGCCTGACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| 3UTR CAA 90 bp | TTGACTCCAGAACATTGTCTCCACAGTAAAGAACATCATAGTAATTaGGTTTATAGTGCAGCTGTATTCAAGAATAGGAGAACTAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LTPEHCLHSKEHHSN*VYSAAVFKNRRTRV Trigger: TACCCTAGTTCTCCTATTCTTGAATACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATGTTCTGGAGTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| 3UTR CCA 72 bp | GCACAGTTGGATTACACAGCATCCCCACCCTATTTCTaGCTTCTCATCTTCCTTATTGACTCCAGAACATTG | + |
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Preference number: 3 (lower is better) Translates to: AQLDYTASPPYF*LLIFLIDSRTL Trigger: CAATGTTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATCCAACTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGACTGTTAGGCAGGGCATaGACCAGAGCAGGAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRLLGRA*TRAGGG Trigger: CCCGCCTCCTGCTCTGGTTCATGCCCTGCCTAACAG...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAGTCACCCGGATGAGCTaGGAATCCTGGGCTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEVTRMS*ESWAGA Trigger: AGCGCCAGCCCAGGATTCCCAGCTCATCCGGGTGAC...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAGGTCCCCAGACTGTCTaGCACCTCTTCCTTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRGPQTV*HLFLVF Trigger: GAAGACAAGGAAGAGGTGGCAGACAGTCTGGGGACC...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAACTGAGTGCACGATCCTaGCTACGCATCATCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPELSARS*LRIISC Trigger: GCAGGAGATGATGCGTAGCCAGGATCGTGCACTCAG...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGACTGAGACCCCATATGTaGAAGTCCAGGGGTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRLRPHM*KSRGWA Trigger: TGCCCAACCCCTGGACTTCCACATATGGGGTCTCAG...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGATCCACACTGTGCCAATaGGTCAGGGTCCTTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRSTLCQ*VRVLED Trigger: ATCCTCAAGGACCCTGACTCATTGGCACAGTGTGGA...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAACTCCAGGTTACTGAGTaGACGATCCTGGCTACGCAT | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPELQVTE*TILATH Trigger: ATGCGTAGCCAGGATCGTGCACTCAGTAACCTGGAG...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGATCAGGCACTGAGATGTaGTGCCACATTAGTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRSGTEM*CHISEP Trigger: AGGCTCACTAATGTGGCAGCACATCTCAGTGCCTGA...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGCCAATCTCAGGGTTCTaGTGGATCAGGTGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: IASQDRYRTHSRAPGKRVPISGF*WIRCCM Trigger: CATGCAGCACCTGATCCAGCAGAACCCTGAGATTGG...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAACAGGACCAGCTGATTTaGATGTGCCTTAAAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEQDQLI*MCLKAV Trigger: CACCGCTTTAAGGCACATCCAAATCAGCTGGTCCTG...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | GATTACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCTTGGACAGCAGACCCTaGATAAAGGGGTCATCAACG | + |
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Preference number: 4 (lower is better) Translates to: DYTASPPYFWLLIFLIDSLDSRP*IKGSST Trigger: CGTTGATGACCCCTTTATCCAGGGTCTGCTGTCCAA...GGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGTTGTCAAGAACCAACTaGCGCACTAGGCCCGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: IASQDRYRTHSRAPGKRVLSRTN*RTRPVL Trigger: CAACACGGGCCTAGTGCGCCAGTTGGTTCTTGACAA...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAATTTTCAGATGCATCCTaGTCCCCAGACTGTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEFSDAS*SPDCLP Trigger: TGGCAGACAGTCTGGGGACCAGGATGCATCTGAAAA...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAATTGCTACTGACTCTTTaGGCAGAGATTGGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPELLLTL*AEIGLT Trigger: GGTCAGGCCAATCTCTGCCCAAAGAGTCAGTAGCAA...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGATCCCTTGATTGCTACTaGCTCTTTGGGCAGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRSLDCY*LFGQRL Trigger: CAATCTCTGCCCAAAGAGTCAGTAGCAATCAAGGGA...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAGCAGAATCTCCTATCTaGGAGGTAAGATTGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRAESPI*EVRLGK Trigger: CTTGCCCAATCTTACCTCTCAGATAGGAGATTCTGC...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGATTTGCCATGGCTGTCTaGAGATGCAACAGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRFAMAV*RCNSSG Trigger: ACCACTACTGTTGCATCTTCAGACAGCCATGGCAAA...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGCCTTTAGCTGCCGGATaGTGCATGTGTCTACAACTG | + |
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Preference number: 4 (lower is better) Translates to: IASQDRYRTHSRAPGKRVPLAAG*CMCLQL Trigger: CAGTTGTAGACACATGCACCATCCGGCAGCTAAAGG...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAAGGAAGGGGGAGGAATaGATACCTAGCTCTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPERKGEE*IPSSVE Trigger: TTCTACAGAGCTAGGTATCCATTCCTCCCCCTTCCT...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAGCATGTGTCTACAACTaGGAAATCCTCCTTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEACVYN*EILLVL Trigger: AAGGACAAGGAGGATTTCTCAGTTGTAGACACATGC...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAATGAGTCAGGGTCCTTaGGGATTTTTCCAGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEMSQGP*GFFQQR Trigger: TCTTTGCTGGAAAAATCCTCAAGGACCCTGACTCAT...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGATCAGGTGCTGCATGTaGGGATTGTCAAGAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: IASQDRYRTHSRAPGKRVIRCCM*GLSRTN Trigger: GTTGGTTCTTGACAATCCTCACATGCAGCACCTGAT...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAGGGTTGTTAAGAATATaGCCAATCTCAGGGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRGLLRI*PISGFC Trigger: GCAGAACCCTGAGATTGGTCATATTCTTAACAACCC...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGAGTACTGTTCTCAGTTaGGTGTCTCAAGAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IASQDRYRTHSRAPGKRVSTVLS*VSQESW Trigger: CCAGCTTTCTTGAGACACTCAACTGAGAACAGTACT...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAGTAGTGGTAGCTGTTaGTGTATCTCATTCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: YTASPPYFWLLIFLIDSRSSGSC*CISFWI Trigger: AATCCAGAATGAGATACATCAACAGCTACCACTACT...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAGGCACTGAGATGTGCTaGCACATTAGTGAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVGTEMC*HISEPG Trigger: GCCAGGCTCACTAATGTGGCAGCACATCTCAGTGCC...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAATCTGCAGCAAGGCTTaGATGACACGGGGATTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVICSKA*MTRGFA Trigger: GGCAAATCCCCGTGTCATGCAAGCCTTGCTGCAGAT...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTATGGAAGTCCAGGGGTTaGGCAGAGGGTCACAATTCT | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVWKSRG*AEGHNS Trigger: AGAATTGTGACCCTCTGCCCAACCCCTGGACTTCCA...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAAGTTACCCAGAAAGCTTaGAAGCCTATTTCTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: TQHPHPISGFSSSLLTPEVTQKA*KPISIF Trigger: GAAAATAGAAATAGGCTTCCAAGCTTTCTGGGTAAC...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAAGAATCTGTAGACCCTaGTCAATCTGCAGCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVRICRP*SICSKA Trigger: AGCCTTGCTGCAGATTGAGCAGGGTCTACAGATTCT...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAGATTTCTCCAGGATTTaGGCCTGGAATAGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVDFSRI*AWNRDW Trigger: CCAGTCTCTATTCCAGGCCCAAATCCTGGAGAAATC...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAGTAGCAATGAGGGCCTaGAGATTGGCTTCAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVVAMRA*RLASRF Trigger: GAATCTTGAAGCCAATCTCCAGGCCCTCATTGCTAC...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR TCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAAAGATCAGGACCAGCTaGTTTGGATGTGCCTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVKIRTS*FGCALK Trigger: CTTTAAGGCACATCCAAATCAGCTGGTCCTGATCTT...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR GCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAATTTCTATTTTCAGATaGATCCTGGTCCCCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVISIFR*ILVPRL Trigger: CAGTCTGGGGACCAGGATGCATCTGAAAATAGAAAT...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CCA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTATCATCTCCTGCATCATaGAAGGGTTACGAAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVSSPAS*KGYEET Trigger: AGTTTCTTCGTAACCCTTCCATGATGCAGGAGATGA...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| 3UTR CAA 72 bp | GAACATTGTCTCCACAGTAAAGAACATCATAGTAATTaGGTTTATAGTGCAGCTGTATTCAAGAATAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EHCLHSKEHHSN*VYSAAVFKNRR Trigger: TCTCCTATTCTTGAATACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATGTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 90 bp | TTGTCCTTGGGTGTCTTCACTGTCACCCGGATGAGCTGGGAATCCTaGGCTGGCGCTAGGCTGCCCTGTGGTAGAGCCTCTCCACTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LSLGVFTVTRMSWES*AGARLPCGRASPLL Trigger: CAAAAGTGGAGAGGCTCTACCACAGGGCAGCCTAGCGCCAGCCCAGGATTCCCAGCTCATCCGGGTGACAGTGAAGACACCCAAGGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 90 bp | GGGCACTCTGTGCCTATGGTCCGACGCTGCATCTTGATGACCAGGTaGACTGTGAGGCCATCTCGCACTCCACACTGTGCCAATGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: GHSVPMVRRCILMTR*TVRPSRTPHCANES Trigger: TGACTCATTGGCACAGTGTGGAGTGCGAGATGGCCTCACAGTCCACCTGGTCATCAAGATGCAGCGTCGGACCATAGGCACAGAGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 90 bp | CTGAGGGATTTCTCCAGGATTTGGGCCTGGAATAGAGACTGGTGGTaGTGGGCACTCTGTGCCTATGGTCCGACGCTGCATCTTGATGAC | + |
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Preference number: 5 (lower is better) Translates to: LRDFSRIWAWNRDWW*WALCAYGPTLHLDD Trigger: GTCATCAAGATGCAGCGTCGGACCATAGGCACAGAGTGCCCATCACCACCAGTCTCTATTCCAGGCCCAAATCCTGGAGAAATCCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 90 bp | ACTGTCTGCCACCTCTTCCTTGTCTTCCACCTGAGACCCCATATGTaGAAGTCCAGGGGTTGGGCAGAGGGTCACAATTCTCTGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TVCHLFLVFHLRPHM*KSRGWAEGHNSLSL Trigger: CAAGGACAGAGAATTGTGACCCTCTGCCCAACCCCTGGACTTCCACATATGGGGTCTCAGGTGGAAGACAAGGAAGAGGTGGCAGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGACGCACTAGGCCCGTGTaGGACAGCAGACCCTGGATA | + |
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Preference number: 5 (lower is better) Translates to: YTASPPYFWLLIFLIDSRRTRPV*DSRPWI Trigger: TATCCAGGGTCTGCTGTCCAACACGGGCCTAGTGCG...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | GATTACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCGTCCGACGCTGCATCTaGATGACCAGGTGGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: DYTASPPYFWLLIFLIDSVRRCI*MTRWTV Trigger: CACAGTCCACCTGGTCATCAAGATGCAGCGTCGGAC...GGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAATCTGAGGAGTTGGGGTaGGTCGGGGATCCTCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TQHPHPISGFSSSLLTPESEELG*VGDPQT Trigger: TGTCTGAGGATCCCCGACCAACCCCAACTCCTCAGA...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 90 bp | GATGGTGTAGAAACAAACGAGGATCTGTTGGCAGAATCTCCTATCTaGGAGGTAAGATTGGGCAAGCTAGTACTGGGGCCAGTAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGVETNEDLLAESPI*EVRLGKLVLGPVEP Trigger: GGGCTCTACTGGCCCCAGTACTAGCTTGCCCAATCTTACCTCTCAGATAGGAGATTCTGCCAACAGATCCTCGTTTGTTTCTACACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 90 bp | AGTTGTAGCTGCTGGGGATTGGTACTAGCTAAGGCTTGTAACACCTaGAGGAAGGGGGAGGAATGGATACCTAGCTCTGTAGAACCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SCSCWGLVLAKACNT*RKGEEWIPSSVEPC Trigger: ACAAGGTTCTACAGAGCTAGGTATCCATTCCTCCCCCTTCCTCCAGGTGTTACAAGCCTTAGCTAGTACCAATCCCCAGCAGCTACAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGGTGGAAGTCCAGGGGTaGGGCAGAGGGTCACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IASQDRYRTHSRAPGKRVVEVQG*GRGSQF Trigger: GAATTGTGACCCTCTGCCCAACCCCTGGACTTCCAC...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | GATTACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCGAGAAATCTGAGGAGTaGGGGTTGGTCGGGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: DYTASPPYFWLLIFLIDSEKSEE*GLVGDP Trigger: AGGATCCCCGACCAACCCCAACTCCTCAGATTTCTC...GGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 90 bp | TCTCAGTTGAGTGTCTCAAGAAAGCTGGGCATGATGACTTTCCCTTaGTTGCTACTGACTCTTTGGGCAGAGATTGGCCTGACCCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SQLSVSRKLGMMTFP*LLLTLWAEIGLTQI Trigger: AATCTGGGTCAGGCCAATCTCTGCCCAAAGAGTCAGTAGCAATCAAGGGAAAGTCATCATGCCCAGCTTTCTTGAGACACTCAACTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAGGCTTGGATTTGAAGTaGGCACAGTACCCTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTASPPYFWLLIFLIDSRGLDLK*AQYPAD Trigger: ATCTGCAGGGTACTGTGCCAACTTCAAATCCAAGCC...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | TACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAATTGCTACTGACTCTTaGGGCAGAGATTGGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YTASPPYFWLLIFLIDSRIATDS*GRDWPD Trigger: GTCAGGCCAATCTCTGCCCAAAGAGTCAGTAGCAAT...TCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCAGAATGTAGCTGCTGGGGATaGGTACTAGCTAAGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQHPHPISGFSSSLLTPECSCWG*VLAKAC Trigger: ACAAGCCTTAGCTAGTACCAATCCCCAGCAGCTACA...TTCTGGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | GATTACACAGCATCCCCACCCTATTTCTGGCTTCTCATCTTCCTTATTGACTCCGGGATGATGGTAAAGTaGGAGGAACTCTGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DYTASPPYFWLLIFLIDSGMMVK*EELCFL Trigger: CAGGAAACAGAGTTCCTCCAACTTTACCATCATCCC...GGAGTCAATAAGGAAGATGAGAAGCCAGAAATAGGGTGGGGATGCTGTGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGATCTTGAGTAACCTGTaGGAGGAAGCCAGGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: IASQDRYRTHSRAPGKRVILSNL*EEAREI Trigger: AATCTCCCTGGCTTCCTCCAACAGGTTACTCAAGAT...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGATGAGGGCCTGGAGATaGGCTTCAAGATTCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IASQDRYRTHSRAPGKRVMRAWR*ASRFRK Trigger: CTTTCTGAATCTTGAAGCCAATCTCCAGGCCCTCAT...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | ATTGCATCTCAAGATAGGTACAGAACTCATTCAAGGGCCCCAGGTAAAAGAGTGTGTTACCCAGAAAGCTaGGAAGCCTATTTCTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: IASQDRYRTHSRAPGKRVCYPES*EAYFYF Trigger: AAAATAGAAATAGGCTTCCAAGCTTTCTGGGTAACA...CACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATCTTGAGATGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS-3UTR CAA 90 bp | CATTGTCTCCACAGTAAAGAACATCATAGTAATTTGGTTTATAGTGCAGCTGTAACTGAGAAATCCTCCTaGTCCTTGGGTGTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HCLHSKEHHSNLVYSAAVTEKSS*SLGVFT Trigger: AGTGAAGACACCCAAGGACAAGGAGGATTTCTCAGT...TACAGCTGCACTATAAACCAAATTACTATGATGTTCTTTACTGTGGAGACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 72 bp | GGTGTCTTCACTGTCACCCGGATGAGCTGGGAATCCTaGGCTGGCGCTAGGCTGCCCTGTGGTAGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVFTVTRMSWES*AGARLPCGRAS Trigger: AGAGGCTCTACCACAGGGCAGCCTAGCGCCAGCCCAGGATTCCCAGCTCATCCGGGTGACAGTGAAGACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | ACTGGTGGTGATGGGCACTCTGTGCCTATGGTCCGACGCTGCATCTaGATGACCAGGTGGACTGTGAGGCCATCTCGCACTCCACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGGDGHSVPMVRRCI*MTRWTVRPSRTPHC Trigger: ACAGTGTGGAGTGCGAGATGGCCTCACAGTCCACCTGGTCATCAAGATGCAGCGTCGGACCATAGGCACAGAGTGCCCATCACCACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | CCCAGACTGTCTGCCACCTCTTCCTTGTCTTCCACCTaGGACCCCATATGTGGAAGTCCAGGGGTTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRLSATSSLSST*DPICGSPGVGQ Trigger: CTGCCCAACCCCTGGACTTCCACATATGGGGTCTCAGGTGGAAGACAAGGAAGAGGTGGCAGACAGTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | GATGGGCACTCTGTGCCTATGGTCCGACGCTGCATCTaGATGACCAGGTGGACTGTGAGGCCATCTCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: DGHSVPMVRRCI*MTRWTVRPSRT Trigger: AGTGCGAGATGGCCTCACAGTCCACCTGGTCATCAAGATGCAGCGTCGGACCATAGGCACAGAGTGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | CCCATAGCCCGCAGTTGCTCCAGTTGTACCCGGAAGTaGGCCTCCAGTTGTAGCTGCTGGGGATTGGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: PIARSCSSCTRK*ASSCSCWGLVL Trigger: TAGTACCAATCCCCAGCAGCTACAACTGGAGGCTCACTTCCGGGTACAACTGGAGCAACTGCGGGCTATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | TTCTCCAGGATTTGGGCCTGGAATAGAGACTGGTGGTaGTGGGCACTCTGTGCCTATGGTCCGACGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSRIWAWNRDWW*WALCAYGPTLH Trigger: ATGCAGCGTCGGACCATAGGCACAGAGTGCCCATCACCACCAGTCTCTATTCCAGGCCCAAATCCTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | GGATTGTCAAGAACCAACTGGCGCACTAGGCCCGTGTaGGACAGCAGACCCTGGATAAAGGGGTCATCAACG | + |
|
Preference number: 6 (lower is better) Translates to: GLSRTNWRTRPV*DSRPWIKGSST Trigger: CGTTGATGACCCCTTTATCCAGGGTCTGCTGTCCAACACGGGCCTAGTGCGCCAGTTGGTTCTTGACAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 72 bp | CACCTCTTCCTTGTCTTCCACCTGAGACCCCATATGTaGAAGTCCAGGGGTTGGGCAGAGGGTCACAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLFLVFHLRPHM*KSRGWAEGHNS Trigger: AGAATTGTGACCCTCTGCCCAACCCCTGGACTTCCACATATGGGGTCTCAGGTGGAAGACAAGGAAGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | TTGTGCCCGCTGATCTCAGAGATCTTGAGTAACCTGTaGGAGGAAGCCAGGGAGATTCTGGGACTCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPLISEILSNL*EEAREILGLQE Trigger: CTCCTGGAGTCCCAGAATCTCCCTGGCTTCCTCCAACAGGTTACTCAAGATCTCTGAGATCAGCGGGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS GCA 72 bp | GCTTCAGTAGCCAGAATCTGTAGACCCTGCTCAATCTaGAGCAAGGCTTGCATGACACGGGGATTTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ASVARICRPCSI*SKACMTRGFAM Trigger: CATGGCAAATCCCCGTGTCATGCAAGCCTTGCTGCAGATTGAGCAGGGTCTACAGATTCTGGCTACTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | CGGATGGTGCATGTGTCTACAACTGAGAAATCCTCCTaGTCCTTGGGTGTCTTCACTGTCACCCGGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RMVHVSTTEKSS*SLGVFTVTRMS Trigger: GCTCATCCGGGTGACAGTGAAGACACCCAAGGACAAGGAGGATTTCTCAGTTGTAGACACATGCACCATCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | ATTGGCTTCAAGATTCAGAAAGCCCATAGCCCGCAGTaGCTCCAGTTGTACCCGGAAGTGAGCCTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IGFKIQKAHSPQ*LQLYPEVSLQL Trigger: CAACTGGAGGCTCACTTCCGGGTACAACTGGAGCAACTGCGGGCTATGGGCTTTCTGAATCTTGAAGCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | TTTAGCTGCCGGATGGTGCATGTGTCTACAACTGAGAAATCCTCCTaGTCCTTGGGTGTCTTCACTGTCACCCGGATGAGCTGGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: FSCRMVHVSTTEKSS*SLGVFTVTRMSWES Trigger: GGATTCCCAGCTCATCCGGGTGACAGTGAAGACACCCAAGGACAAGGAGGATTTCTCAGTTGTAGACACATGCACCATCCGGCAGCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | TCTGGATTCGAGGGACTTGATTTGTGCCCGCTGATCTCAGAGATCTaGAGTAACCTGTTGGAGGAAGCCAGGGAGATTCTGGGACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGFEGLDLCPLISEI*SNLLEEAREILGLQ Trigger: CTGGAGTCCCAGAATCTCCCTGGCTTCCTCCAACAGGTTACTCAAGATCTCTGAGATCAGCGGGCACAAATCAAGTCCCTCGAATCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | GACTGTGAGGCCATCTCGCACTCCACACTGTGCCAATaGGTCAGGGTCCTTGAGGATTTTTCCAGCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DCEAISHSTLCQ*VRVLEDFSSKD Trigger: ATCTTTGCTGGAAAAATCCTCAAGGACCCTGACTCATTGGCACAGTGTGGAGTGCGAGATGGCCTCACAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 72 bp | TGCTGGGGATTGGTACTAGCTAAGGCTTGTAACACCTaGAGGAAGGGGGAGGAATGGATACCTAGCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CWGLVLAKACNT*RKGEEWIPSSV Trigger: TACAGAGCTAGGTATCCATTCCTCCCCCTTCCTCCAGGTGTTACAAGCCTTAGCTAGTACCAATCCCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | AGGAAGCCAGGGAGATTCTGGGACTCCAGGAGTAGCTaGCATAAGGGAAGATGGTGTAGAAACAAACGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RKPGRFWDSRSS*HKGRWCRNKRG Trigger: TCCTCGTTTGTTTCTACACCATCTTCCCTTATGTCAGCTACTCCTGGAGTCCCAGAATCTCCCTGGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS GCA 72 bp | ACCCAGAAAGCTTGGAAGCCTATTTCTATTTTCAGATaGATCCTGGTCCCCAGACTGTCTGCCACCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TQKAWKPISIFR*ILVPRLSATSS Trigger: GGAAGAGGTGGCAGACAGTCTGGGGACCAGGATGCATCTGAAAATAGAAATAGGCTTCCAAGCTTTCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | AGTGTCTCAAGAAAGCTGGGCATGATGACTTTCCCTTaGTTGCTACTGACTCTTTGGGCAGAGATTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSRKLGMMTFP*LLLTLWAEIGL Trigger: CAGGCCAATCTCTGCCCAAAGAGTCAGTAGCAATCAAGGGAAAGTCATCATGCCCAGCTTTCTTGAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | GAAACAAACGAGGATCTGTTGGCAGAATCTCCTATCTaGGAGGTAAGATTGGGCAAGCTAGTACTGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ETNEDLLAESPI*EVRLGKLVLGP Trigger: TGGCCCCAGTACTAGCTTGCCCAATCTTACCTCTCAGATAGGAGATTCTGCCAACAGATCCTCGTTTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | GTAAAGTTGGAGGAACTCTGTTTCCTGAAAGTGGTGATTCCTGGCTaGGATTTGAAGTTGGCACAGTACCCTGCAGATAAGATTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VKLEELCFLKVVIPG*DLKLAQYPADKIPG Trigger: CCCTGGAATCTTATCTGCAGGGTACTGTGCCAACTTCAAATCCAAGCCAGGAATCACCACTTTCAGGAAACAGAGTTCCTCCAACTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | AAGAAAGCTGGGCATGATGACTTTCCCTTGATTGCTACTGACTCTTaGGGCAGAGATTGGCCTGACCCAGATTTAGGGGATGATGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KKAGHDDFPLIATDS*GRDWPDPDLGDDGK Trigger: TTTACCATCATCCCCTAAATCTGGGTCAGGCCAATCTCTGCCCAAAGAGTCAGTAGCAATCAAGGGAAAGTCATCATGCCCAGCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | GTGGTAGCTGTTGATGTATCTCATTCTGGATTCGAGGGACTTGATTaGTGCCCGCTGATCTCAGAGATCTTGAGTAACCTGTTGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVAVDVSHSGFEGLD*CPLISEILSNLLEE Trigger: TTCCTCCAACAGGTTACTCAAGATCTCTGAGATCAGCGGGCACAAATCAAGTCCCTCGAATCCAGAATGAGATACATCAACAGCTACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS TCA 72 bp | GAAAGAAGGAGACCCATCCACAGAGTAAACAGAACTTaGCTGAGGGATTTCTCCAGGATTTGGGCCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ERRRPIHRVNRT*LRDFSRIWAWN Trigger: ATTCCAGGCCCAAATCCTGGAGAAATCCCTCAGTCAAGTTCTGTTTACTCTGTGGATGGGTCTCCTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | TTCCTGAAAGTGGTGATTCCTGGCTTGGATTTGAAGTaGGCACAGTACCCTGCAGATAAGATTCCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FLKVVIPGLDLK*AQYPADKIPGT Trigger: AGTCCCTGGAATCTTATCTGCAGGGTACTGTGCCAACTTCAAATCCAAGCCAGGAATCACCACTTTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | CATGTAGGCTTCCACCTTGTCCAGTACTGTTCTCAGTaGAGTGTCTCAAGAAAGCTGGGCATGATGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HVGFHLVQYCSQ*SVSRKLGMMTF Trigger: GAAAGTCATCATGCCCAGCTTTCTTGAGACACTCAACTGAGAACAGTACTGGACAAGGTGGAAGCCTACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | CTCTGTTTCCTGAAAGTGGTGATTCCTGGCTTGGATTaGAAGTTGGCACAGTACCCTGCAGATAAGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCFLKVVIPGLD*KLAQYPADKIP Trigger: TGGAATCTTATCTGCAGGGTACTGTGCCAACTTCAAATCCAAGCCAGGAATCACCACTTTCAGGAAACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | GTTGATGTATCTCATTCTGGATTCGAGGGACTTGATTaGTGCCCGCTGATCTCAGAGATCTTGAGTAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VDVSHSGFEGLD*CPLISEILSNL Trigger: CAGGTTACTCAAGATCTCTGAGATCAGCGGGCACAAATCAAGTCCCTCGAATCCAGAATGAGATACATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | GTGGTGGTACTAGCAGTAGTAGCAGTGACAAAAGGATaGCCACCAAATTGTTCCTGTACTGCATTAAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VVVLAVVAVTKG*PPNCSCTALSM Trigger: CATGCTTAATGCAGTACAGGAACAATTTGGTGGCAATCCTTTTGTCACTGCTACTACTGCTAGTACCACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | GGTGGTACTAGCAGTAGTAGCAGTGACAAAAGGATTGCCACCAAATaGTTCCTGTACTGCATTAAGCATGGGATCCATAATATCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GGTSSSSSDKRIATK*FLYCIKHGIHNICV Trigger: TACACAGATATTATGGATCCCATGCTTAATGCAGTACAGGAACAATTTGGTGGCAATCCTTTTGTCACTGCTACTACTGCTAGTACCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | AGCAGTAGTAGCAGTGACAAAAGGATTGCCACCAAATaGTTCCTGTACTGCATTAAGCATGGGATCCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSDKRIATK*FLYCIKHGIHN Trigger: ATTATGGATCCCATGCTTAATGCAGTACAGGAACAATTTGGTGGCAATCCTTTTGTCACTGCTACTACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 90 bp | GTAACTGTTGAAGATAATCAAAGAGTCCTATGTTACCCAGAAAGCTaGGAAGCCTATTTCTATTTTCAGATGCATCCTGGTCCCCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VTVEDNQRVLCYPES*EAYFYFQMHPGPQT Trigger: AGTCTGGGGACCAGGATGCATCTGAAAATAGAAATAGGCTTCCAAGCTTTCTGGGTAACATAGGACTCTTTGATTATCTTCAACAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CCA 72 bp | AAGATAATCAAAGAGTCCTATGTTACCCAGAAAGCTTaGAAGCCTATTTCTATTTTCAGATGCATCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KIIKESYVTQKA*KPISIFRCILV Trigger: GACCAGGATGCATCTGAAAATAGAAATAGGCTTCCAAGCTTTCTGGGTAACATAGGACTCTTTGATTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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| CDS CAA 72 bp | GAAGATAATCAAAGAGTCCTATGTTACCCAGAAAGCTaGGAAGCCTATTTCTATTTTCAGATGCATCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EDNQRVLCYPES*EAYFYFQMHPG Trigger: ACCAGGATGCATCTGAAAATAGAAATAGGCTTCCAAGCTTTCTGGGTAACATAGGACTCTTTGATTATCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057254.6 |
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