Pregenerated sensors for UBQLN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050148Ensembl transcript IDs: ENSMUST00000060714.10
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATGCAACACCTTTGAGTaGAACAGTATTGATTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GLFMGEAEELLDKKHFPGCNTFE*NSIDSH Trigger: GTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| 3UTR CAA 90 bp | AATAAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATaGATTCCCACCATTCAAATCAGAGAAGGAAGGAAATCAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NKEKCLHATPLSETV*IPTIQIREGRKSKE Trigger: TTCTTTTGATTTCCTTCCTTCTCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGTACAATTCCAATTGTaGTTACTGTACTGTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: TINLQLLTQCYTVRFLYNVQFQL*LLYCVQ Trigger: TTGTACACAGTACAGTAAGCACAATTGGAATTGTAC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| 3UTR-3UTR CAA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGAATCAATCTGCAACTGTaGACACAATGTTACACTGTA | + |
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Preference number: 3 (lower is better) Translates to: GLFMGEAEELLDKKHFPGINLQL*TQCYTV Trigger: TACAGTGTAACATTGTGTCAACAGTTGCAGATTGAT...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| 3UTR TCA 72 bp | TGGACATCTGTAGGACAAAACTTGTTCACCCAACTGTaGAGGCTGATACCTGTTTCCAAAAATCACAATAAA | + |
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Preference number: 3 (lower is better) Translates to: WTSVGQNLFTQL*RLIPVSKNHNK Trigger: TTTATTGTGATTTTTGGAAACAGGTATCAGCCTTCACAGTTGGGTGAACAAGTTTTGTCCTACAGATGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAGCAGTCGTGCTGGGCTaGGTGGTGGCCTGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRAVVLG*VVAWPC Trigger: GCAGGGCCAGGCCACCACGCAGCCCAGCACGACTGC...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGTTCCCGGCGGTGGTaGTGCTGGAGCTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRCSRRW*CWSCCQ Trigger: CTGGCAGCAGCTCCAGCAGCACCACCGCCGGGAACA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGGTCGTGGTGGTGGTaGTGGTCGCAGCCGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRWSWWW*WSQPSG Trigger: CCCAGACGGCTGCGACCACCACCACCACCACGACCA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGGTGTTCCCGGCGGTaGTGCTGCTGGAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRWCSRR*CCWSCC Trigger: GCAGCAGCTCCAGCAGCACCACCGCCGGGAACACCA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGCTGCCAGAGCCACTaGCACTGCTTGTGGTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRCCQSH*HCLWSW Trigger: CCACGACCACAAGCAGTGGCAGTGGCTCTGGCAGCA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAGGCCGCGATGGTTTCTaGATTCTGCATCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRGRDGF*ILHLLQ Trigger: CTGCAGCAGATGCAGAATCCAGAAACCATCGCGGCC...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATCCGTGCGGGAGGGCTaGGTACCTTCCCCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGSVREG*VPSPEV Trigger: CACCTCAGGGGAAGGTACTCAGCCCTCCCGCACGGA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATCTGGATTCTGCATCTaGTGCAGGAAATTCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRSGFCI*CRKFGS Trigger: GCTCCCGAATTTCCTGCAGCAGATGCAGAATCCAGA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGTTCAGTAGGTGGCTaGTTTCTGGGTTTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRCSVGG*FLGFSG Trigger: TCCAGAGAAACCCAGAAATCAGCCACCTACTGAACA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATTCTCAGTTATCTGCTaGAGCAGGCTCTGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRFSVIC*SRLCIP Trigger: AGGAATGCAGAGCCTGCTGCAGCAGATAACTGAGAA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATATGGTTTCAGTAGGTaGAGAGCTGGACACAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRYGFSR*RAGHSG Trigger: ACCACTGTGTCCAGCTCTGCACCTACTGAAACCATA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGGCTGCGTGGTGGCCTaGCCCTGCGGACGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRGCVVA*PCGRFW Trigger: CCAGAACCGTCCGCAGGGCCAGGCCACCACGCAGCC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGATGCTGGGCTGCGTGGTaGCCTGGCCCTGCGGACGGT | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRCWAAW*PGPADG Trigger: ACCGTCCGCAGGGCCAGGCCACCACGCAGCCCAGCA...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATTGACATGGCCGCGATaGTTTCTGGATTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GGREGGREGLHLKMHPIRLTWPR*FLDSAS Trigger: AGATGCAGAATCCAGAAACCATCGCGGCCATGTCAA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGATTCCCGCAGTCGTGCTaGGCTGCGTGGTGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRFPQSC*AAWWPG Trigger: GCCAGGCCACCACGCAGCCCAGCACGACTGCGGGAA...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGCGCCGCCGCCGTGGTaGTGGTCGTGGTCGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNAPPPW*WSWSSC Trigger: GCACGACGACCACGACCACCACCACGGCGGCGGCGC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATACCTTCCCCTGAGGTaGAACTGCTCCCCACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGYLPLR*NCSPPW Trigger: CCACGGTGGGGAGCAGTTCCACCTCAGGGGAAGGTA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATTGTGGTCGTGGTGGTaGTGGTGGTCGCAGCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGLWSWW*WWSQPS Trigger: AGACGGCTGCGACCACCACCACCACCACGACCACAA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGACGGCGGTGGTGCTGCTaGAGCTGCTGCCAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRRRWCC*SCCQSH Trigger: GTGGCTCTGGCAGCAGCTCCAGCAGCACCACCGCCG...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCTGGGCCCTATGGGAGTaGCTGGGCCCACAGGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTWALWE*LGPQGL Trigger: TAACCCCTGTGGGCCCAGTCACTCCCATAGGGCCCA...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATGCTGCAGCAGGCTCTaGATTCCTGGGGTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGCCSRL*IPGVLK Trigger: CTTCAGCACCCCAGGAATGCAGAGCCTGCTGCAGCA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATGCTGCATCTGGTTCTaGAGCTCGGTGAAGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGCCIWF*SSVKLG Trigger: GCCCAACTTCACCGAGCTTCAGAACCAGATGCAGCA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCCTGAGTACCTTCCCCTaGGGTGGAACTGCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTLSTFP*GGTAPH Trigger: GTGGGGAGCAGTTCCACCTCAGGGGAAGGTACTCAG...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCGGGTTGCCCCCAAACTaGTCCTGTGCGGCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTGLPPN*SCAAFS Trigger: GCTGAATGCCGCACAGGAGCAGTTTGGGGGCAACCC...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGGTTGTTGGCGGTGGTaGCCAAGGATTGGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRGCWRW*PRIGQR Trigger: CCGCTGCCCAATCCTTGGGCACCACCGCCAACAACC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGATGGTGCTGCTGGAGCTaGTGCCAGAGCCACTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRWCCWS*CQSHCH Trigger: GTGGCAGTGGCTCTGGCAGCAGCTCCAGCAGCACCA...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCCACTGCCACTGCTTGTaGTCGTGGTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTHCHCL*SWWWWW Trigger: CCACCACCACCACCACGACCACAAGCAGTGGCAGTG...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGAATCTGCTCCTGCAGCTaGGGATTCGAAGTGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGICSCS*GFEVNS Trigger: GCTGTTCACTTCGAATCCTCAGCTGCAGGAGCAGAT...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGAAGAGTCTGTAGCCCCTaGTGGATCTGCATTAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGRVCSP*WICISA Trigger: AGCGCTAATGCAGATCCAGCAGGGGCTACAGACTCT...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCCTGGGCCGCCATATCTaGATTCTGGCTCAGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTLGRHI*ILAQRL Trigger: CAGTCGCTGAGCCAGAATCCAGATATGGCGGCCCAG...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGCTTCCTTGAACTGCTaGACGGTGCTGTTCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRASLNC*TVLFSG Trigger: GCCCGAGAACAGCACCGTGCAGCAGTTCAAGGAAGC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCGTCTGTAGCCCCTGCTaGATCTGCATTAGCGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTVCSPC*ICISAC Trigger: GCAAGCGCTAATGCAGATCCAGCAGGGGCTACAGAC...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGGCCCACAGGGGTTATaGCGGTTCCCAGCACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNGPQGL*RFPALP Trigger: TGGGAGTGCTGGGAACCGCCATAACCCCTGTGGGCC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCTGGAAATCGCTTCCTTaGACTGCTGCACGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTWKSLP*TAARCC Trigger: ACAGCACCGTGCAGCAGTTCAAGGAAGCGATTTCCA...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGCTGAGGATTCGAAGTaGACAGCGGGCTACTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRAEDSK*TAGYSA Trigger: TGCTGAGTAGCCCGCTGTTCACTTCGAATCCTCAGC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAAGAACCCCATGGCGTTaGGCTGTTCCAGTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRRTPWR*AVPVAA Trigger: AGCAGCAACTGGAACAGCTCAACGCCATGGGGTTCT...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATCGCTTCCTTGAACTaGTGCACGGTGCTGTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTIASLN*CTVLFS Trigger: CGAGAACAGCACCGTGCAGCAGTTCAAGGAAGCGAT...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATTGGCCATGATGAGCTaGCTCATCAGATCAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGLAMMS*LIRSGF Trigger: GAATCCTGATCTGATGAGGCAGCTCATCATGGCCAA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATCAGAGCCACTGCCACTaGTTGTGGTCGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNQSHCH*LWSWWW Trigger: CCACCACCACGACCACAAGCAGTGGCAGTGGCTCTG...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCATGGGAGAAGCTGAGGAACTCTTAGATAAAAAGCACTTTCCTGGATGCTTTCGAGATTACTaGGAGCCAGGTCTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: GLFMGEAEELLDKKHFPGCFRDY*EPGLDF Trigger: GAAATCAAGACCTGGCTCTCAGTAATCTCGAAAGCA...TCCAGGAAAGTGCTTTTTATCTAAGAGTTCCTCAGCTTCTCCCATGAAGAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATAGCCGTCTGGGTTGTTaGCGGTGGTGCCCAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNSRLGC*RWCPRI Trigger: AATCCTTGGGCACCACCGCCAACAACCCAGACGGCT...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGAGGGCTTCCTCCAGTaGGAGCCTGCACCATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNEGFLQ*EPAPFV Trigger: AACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATTCTCAATGGCCGCGTTaGTGTCGCCTCCTGTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNSQWPR*CRLLLL Trigger: TAGCAACAGGAGGCGACATCAACGCGGCCATTGAGA...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGAATGTCAGTGTACATaGGCCGCAGAGCATTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRECQCT*AAEHCS Trigger: GCTACAATGCTCTGCGGCGCATGTACACTGACATTC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAGGATTCTGCATCTGCTaGAGGAAATTCGGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRGFCIC*RKFGSC Trigger: ACAGCTCCCGAATTTCCTGCAGCAGATGCAGAATCC...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATAGCCCCTGCTGGATCTaGATTAGCGCTTGCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNSPCWI*ISACIA Trigger: AGCGATGCAAGCGCTAATGCAGATCCAGCAGGGGCT...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCACAGTCAGTCCATCATaGATGCCATGCTGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTTVSPS*MPCCIK Trigger: CTTGATGCAGCATGGCATCCATGATGGACTGACTGT...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCGGGTTGTTCAGTAGGTaGCTGATTTCTGGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTGLFSR*LISGFL Trigger: GAGAAACCCAGAAATCAGCCACCTACTGAACAACCC...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAAAAATCAGCACGAGCTaGTCGGTCTGCGATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRKISTS*SVCDLK Trigger: CTTCAAATCGCAGACCGATCAGCTCGTGCTGATTTT...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCCTTTTGATAACCAGGTaGACAGTCAGTCCATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKCLHATPLSETVLIPTLLITR*TVSPSW Trigger: CCATGATGGACTGACTGTTCACCTGGTTATCAAAAG...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATCCCAAACTGCTCCTGTaGGGCATTCAGCATAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNPKLLL*GIQHRF Trigger: GAACCTATGCTGAATGCCGCACAGGAGCAGTTTGGG...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGCACCATTTGTTGAATaGACTGCTGGTTGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNAPFVE*TAGWVQ Trigger: CTGGACCCAACCAGCAGTTCATTCAACAAATGGTGC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGCCTGCACCATTTGTTaGATGAACTGCTGGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNACTIC*MNCWLG Trigger: ACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATCTACTCAGCATCATCTaGGCCGCCATATCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNLLSII*AAISGF Trigger: GAATCCAGATATGGCGGCCCAGATGATGCTGAGTAG...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGGATTCTCAGTTATCTaGTGCAGCAGGCTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNGFSVI*CSRLCI Trigger: AATGCAGAGCCTGCTGCAGCAGATAACTGAGAATCC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR GCA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAATGGTTTCTGGATTCTaGATCTGCTGCAGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LHATPLSETVLIPTIQIRMVSGF*ICCRKF Trigger: GAATTTCCTGCAGCAGATGCAGAATCCAGAAACCAT...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR TCA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATTGCATCAAGGTATCTTaGTCTTTCAGGATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TINLQLLTQCYTVRFLYNCIKVS*SFRIFP Trigger: CGGAAAGATCCTGAAAGATCAAGATACCTTGATGCA...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | TCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTGGTCGTGGTCGTCGTaGTCGTTCCCGCAGTCGTGCTGGGCTGCGTGGTGGCCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPPAPPPWWWSWSS*SFPQSCWAAWWPGP Trigger: AGGGCCAGGCCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | CCGATGATGTCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTGGTCGTaGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCTGCGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PMMSSPPAPPPWWWS*SSCSFPQSCWAAWW Trigger: CCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | TGGGAGCCGATGATGTCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTaGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: WEPMMSSPPAPPPWW*SWSSCSFPQSCWAA Trigger: CGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGGCTCCCA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | TCCTGGGAGCCGATGATGTCGTCGCCGCCGGCGCCGCCGCCGTGGTaGTGGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWEPMMSSPPAPPPW*WSWSSCSFPQSCWA Trigger: AGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGGCTCCCAGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | TACTCCTGGGAGCCGATGATGTCGTCGCCGCCGGCGCCGCCGCCGTaGTGGTGGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YSWEPMMSSPPAPPP*WWSWSSCSFPQSCW Trigger: CCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGGCTCCCAGGAGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 90 bp | GCTGCTATTCGTGGTGGTAGGTGTGGAGCTACTCCTGGGAGCCGATaGTGTCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTGGTCGTGGT | + |
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Preference number: 5 (lower is better) Translates to: AAIRGGRCGATPGSR*CRRRRRRRRGGGRG Trigger: ACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGGCTCCCAGGAGTAGCTCCACACCTACCACCACGAATAGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | TCCCGGCGGTGGTGCTGCTGGAGCTGCTGCCAGAGCCACTGCCACTaGTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRWCCWSCCQSHCH*LWSWWWWWSQPSGL Trigger: CAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCAGTGGCAGTGGCTCTGGCAGCAGCTCCAGCAGCACCACCGCCGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | CGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTGTTGGCGGTGGTaGCCAAGGATTGGGCAGCGGATCACGATTCTCCGTGCGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGGGGGRSRLGCWRW*PRIGQRITILRAGG Trigger: CCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | GTGGTGGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCTaGGTGGTGGCCTGGCCCTGCGGACGGTTCTGGCTTTTGATAACC | + |
|
Preference number: 5 (lower is better) Translates to: VVVVVVVLVPAVVLG*VVAWPCGRFWLLIT Trigger: GGTTATCAAAAGCCAGAACCGTCCGCAGGGCCAGGCCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | CTGCCACTGCTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTaGGTTGTTGGCGGTGGTGCCCAAGGATTGGGCAGCGGATCACGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLLVVVVVVVVAAV*VVGGGAQGLGSGSR Trigger: TCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCAGTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 90 bp | GCCCAAGGATTGGGCAGCGGATCACGATTCTCCGTGCGGGAGGGCTaGGTACCTTCCCCTGAGGTGGAACTGCTCCCCACCGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQGLGSGSRFSVREG*VPSPEVELLPTVAN Trigger: GTTTGCCACGGTGGGGAGCAGTTCCACCTCAGGGGAAGGTACTCAGCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | TGGTGGTCGCAGCCGTCTGGGTTGTTGGCGGTGGTGCCCAAGGATTaGGCAGCGGATCACGATTCTCCGTGCGGGAGGGCTGAGTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: WWSQPSGLLAVVPKD*AADHDSPCGRAEYL Trigger: AAGGTACTCAGCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | GCTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTGTTaGCGGTGGTGCCCAAGGATTGGGCAGCGGATCACGATTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ACGRGGGGGRSRLGC*RWCPRIGQRITILR Trigger: ACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | GGTTGGACTTATGGTTTCAGTAGGTGCAGAGCTGGACACAGTGGTTaGAGGCGGGATGCCAGTGCCGGTGGAGCCGGGGGAGCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWTYGFSRCRAGHSG*RRDASAGGAGGACR Trigger: CCTGCAAGCTCCCCCGGCTCCACCGGCACTGGCATCCCGCCTGCAACCACTGTGTCCAGCTCTGCACCTACTGAAACCATAAGTCCAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | GCTCTGCATTCCTGGGGTGCTGAAGATGCTAGCCACGTAATTAGCTaGAGCCATGGTGTTCCCGGCGGTGGTGCTGCTGGAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALHSWGAEDASHVIS*SHGVPGGGAAGAAA Trigger: GGCAGCAGCTCCAGCAGCACCACCGCCGGGAACACCATGGCTGCAGCTAATTACGTGGCTAGCATCTTCAGCACCCCAGGAATGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 90 bp | CTGGTTGGGTCCAGATTCCGAGGTTGGACTTATGGTTTCAGTAGGTaGAGAGCTGGACACAGTGGTTGCAGGCGGGATGCCAGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVGSRFRGWTYGFSR*RAGHSGCRRDASAG Trigger: ACCGGCACTGGCATCCCGCCTGCAACCACTGTGTCCAGCTCTGCACCTACTGAAACCATAAGTCCAACCTCGGAATCTGGACCCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAGGTGGTGCCCAAGGATaGGGCAGCGGATCACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRGGAQG*GSGSRF Trigger: GAATCGTGATCCGCTGCCCAATCCTTGGGCACCACC...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 90 bp | GGCGGCTGTGGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTTGTTaGATGAACTGCTGGTTGGGTCCAGATTCCGAGGTTGGACTTATG | + |
|
Preference number: 5 (lower is better) Translates to: GGCGGLPPVRACTIC*MNCWLGPDSEVGLM Trigger: CATAAGTCCAACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCCACAGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAAAGAACCCCATGGCGTaGAGCTGTTCCAGTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRKNPMA*SCSSCC Trigger: GCAGCAACTGGAACAGCTCAACGCCATGGGGTTCTT...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATTGGAAATCGCTTCCTaGAACTGCTGCACGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRLEIAS*NCCTVL Trigger: CAGCACCGTGCAGCAGTTCAAGGAAGCGATTTCCAA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAACTGAGAGCCAGGTCTaGATTTCGCATCATCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRTESQV*ISHHLL Trigger: CAAGAGATGATGCGAAATCAAGACCTGGCTCTCAGT...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGAGAGAGCCTGCACCATTaGTTGAATGAACTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRESLHH*LNELLV Trigger: AACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTC...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGACTCCACCTTAAAATGCATCCTATTAGATGCGATTTGAAGCGTTaGGAAATCGCTTCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGREGGREGLHLKMHPIRCDLKR*EIASLN Trigger: GTTCAAGGAAGCGATTTCCAAACGCTTCAAATCGCA...TCTAATAGGATGCATTTTAAGGTGGAGTCCCTCCCTCCCTCCCTCCCTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCTCGCAGCCGTCTGGGTaGTTGGCGGTGGTGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEKCLHATPLSETVLIPTSQPSG*LAVVPK Trigger: CTTGGGCACCACCGCCAACAACCCAGACGGCTGCGA...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGATGGAGCCGGGGGAGCTaGCAGGGCCAGTGGGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LHATPLSETVLIPTIQIRWSRGS*QGQWVL Trigger: TAGGACCCACTGGCCCTGCAAGCTCCCCCGGCTCCA...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 90 bp | CACCATTTGTTGAATGAACTGCTGGTTGGGTCCAGATTCCGAGGTTaGACTTATGGTTTCAGTAGGTGCAGAGCTGGACACAGTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HHLLNELLVGSRFRG*TYGFSRCRAGHSGC Trigger: GCAACCACTGTGTCCAGCTCTGCACCTACTGAAACCATAAGTCCAACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCAGCCACTGCCACTGCTaGTGGTCGTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KEKCLHATPLSETVLIPTSHCHC*WSWWWW Trigger: CCACCACCACCACGACCACAAGCAGTGGCAGTGGCT...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCACCGTGGCAAACGGGTaGCCCCCAAACTGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KEKCLHATPLSETVLIPTTVANG*PPNCSC Trigger: ACAGGAGCAGTTTGGGGGCAACCCGTTTGCCACGGT...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGTGACTTTGATGATTTaGGGCTCGGCCGGCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TINLQLLTQCYTVRFLYNVTLMI*GSAGGL Trigger: CAGCCCGCCGGCCGAGCCCAAAATCATCAAAGTCAC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCAGCCTGCACCATTTGTaGAATGAACTGCTGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: KEKCLHATPLSETVLIPTSLHHL*NELLVG Trigger: CCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCT...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAGTGTTTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCTTAGGGCCTGCAAGTTaGCTTCGCGGTTTAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: KEKCLHATPLSETVLIPTLGPAS*LRGLRT Trigger: GGTTCTTAAACCGCGAAGCAAACTTGCAGGCCCTAA...GGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAAACACTTCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATCTCTCAATGGCCGCGTaGATGTCGCCTCCTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TINLQLLTQCYTVRFLYNLSMAA*MSPPVA Trigger: AGCAACAGGAGGCGACATCAACGCGGCCATTGAGAG...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | TTGCATGCAACACCTTTGAGTGAAACAGTATTGATTCCCACCATTCAAATCAGAAACTCCTCCTTCTCTTaGGGGGTCTTCACAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: LHATPLSETVLIPTIQIRNSSFS*GVFTVT Trigger: AGTCACTGTGAAGACCCCCAAAGAGAAGGAGGAGTT...TCTGATTTGAATGGTGGGAATCAATACTGTTTCACTCAAAGGTGTTGCATGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATGTCTTCACAGTGACTTaGATGATTTTGGGCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TINLQLLTQCYTVRFLYNVFTVT*MILGSA Trigger: GGCCGAGCCCAAAATCATCAAAGTCACTGTGAAGAC...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS-3UTR CAA 90 bp | ACAATCAATCTGCAACTGTTGACACAATGTTACACTGTAAGGTTTCTGTACAATCTCATTATATCTGGGTaGTTCAGTAGGTGGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: TINLQLLTQCYTVRFLYNLIISG*FSRWLI Trigger: AATCAGCCACCTACTGAACAACCCAGATATAATGAG...ATTGTACAGAAACCTTACAGTGTAACATTGTGTCAACAGTTGCAGATTGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | CCGGCGCCGCCGCCGTGGTGGTGGTCGTGGTCGTCGTaGTCGTTCCCGCAGTCGTGCTGGGCTGCGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PAPPPWWWSWSS*SFPQSCWAAWW Trigger: CCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | TCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTGGTCGTaGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSPPAPPPWWWS*SSCSFPQSCWA Trigger: AGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | CCGATGATGTCGTCGCCGCCGGCGCCGCCGCCGTGGTaGTGGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: PMMSSPPAPPPW*WSWSSCSFPQS Trigger: CGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | ATGATGTCGTCGCCGCCGGCGCCGCCGCCGTGGTGGTaGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: MMSSPPAPPPWW*SWSSCSFPQSC Trigger: GCACGACTGCGGGAACGAGCACGACGACCACGACCACCACCACGGCGGCGGCGCCGGCGGCGACGACATCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 72 bp | CGTGGTGGTAGGTGTGGAGCTACTCCTGGGAGCCGATaGTGTCGTCGCCGCCGGCGCCGCCGCCGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RGGRCGATPGSR*CRRRRRRRRGG Trigger: ACCACCACGGCGGCGGCGCCGGCGGCGACGACATCATCGGCTCCCAGGAGTAGCTCCACACCTACCACCACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | TGGTGGTCGTGGTCGTCGTGCTCGTTCCCGCAGTCGTaGTGGGCTGCGTGGTGGCCTGGCCCTGCGGACGGT | + |
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Preference number: 6 (lower is better) Translates to: WWSWSSCSFPQS*WAAWWPGPADG Trigger: ACCGTCCGCAGGGCCAGGCCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCACGACCACCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | GTGGTCGTCGTGCTCGTTCCCGCAGTCGTGCTGGGCTaGGTGGTGGCCTGGCCCTGCGGACGGTTCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VVVVLVPAVVLG*VVAWPCGRFWL Trigger: AAGCCAGAACCGTCCGCAGGGCCAGGCCACCACGCAGCCCAGCACGACTGCGGGAACGAGCACGACGACCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | CAGAGCTGGACACAGTGGTTGCAGGCGGGATGCCAGTaGCGGTGGAGCCGGGGGAGCTTGCAGGGCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSWTQWLQAGCQ*RWSRGSLQGQW Trigger: CCACTGGCCCTGCAAGCTCCCCCGGCTCCACCGGCACTGGCATCCCGCCTGCAACCACTGTGTCCAGCTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | TGGACACAGTGGTTGCAGGCGGGATGCCAGTGCCGGTaGAGCCGGGGGAGCTTGCAGGGCCAGTGGGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: WTQWLQAGCQCR*SRGSLQGQWVL Trigger: TAGGACCCACTGGCCCTGCAAGCTCCCCCGGCTCCACCGGCACTGGCATCCCGCCTGCAACCACTGTGTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 90 bp | CGGCGGTGGTGCTGCTGGAGCTGCTGCCAGAGCCACTGCCACTGCTaGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RRWCCWSCCQSHCHC*WSWWWWWSQPSGLL Trigger: CAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCAGTGGCAGTGGCTCTGGCAGCAGCTCCAGCAGCACCACCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | TCTCCGTGCGGGAGGGCTGAGTACCTTCCCCTGAGGTaGAACTGCTCCCCACCGTGGCAAACGGGTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SPCGRAEYLPLR*NCSPPWQTGCP Trigger: GGGGCAACCCGTTTGCCACGGTGGGGAGCAGTTCCACCTCAGGGGAAGGTACTCAGCCCTCCCGCACGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | TGCTGGAGCTGCTGCCAGAGCCACTGCCACTGCTTGTaGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CWSCCQSHCHCL*SWWWWWSQPSG Trigger: CCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCAGTGGCAGTGGCTCTGGCAGCAGCTCCAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 72 bp | GCAGCCGTCTGGGTTGTTGGCGGTGGTGCCCAAGGATaGGGCAGCGGATCACGATTCTCCGTGCGGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAVWVVGGGAQG*GSGSRFSVREG Trigger: GCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | CAGCCGTCTGGGTTGTTGGCGGTGGTGCCCAAGGATTaGGCAGCGGATCACGATTCTCCGTGCGGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QPSGLLAVVPKD*AADHDSPCGRA Trigger: AGCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | CTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTaGGTTGTTGGCGGTGGTGCCCAAGGATTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVVVVVVVVAAV*VVGGGAQGLGS Trigger: GCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 72 bp | TCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTGTaGGCGGTGGTGCCCAAGGATTGGGCAGCGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: SWWWWWSQPSGL*AVVPKDWAADH Trigger: GTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 72 bp | TGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTaGTTGGCGGTGGTGCCCAAGGATTGGGCAGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: WSWWWWWSQPSG*LAVVPKDWAAD Trigger: ATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 72 bp | TTGGGCAGCGGATCACGATTCTCCGTGCGGGAGGGCTaGGTACCTTCCCCTGAGGTGGAACTGCTCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: LGSGSRFSVREG*VPSPEVELLPT Trigger: GGTGGGGAGCAGTTCCACCTCAGGGGAAGGTACTCAGCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | GGTGGTGGTCGCAGCCGTCTGGGTTGTTGGCGGTGGTaGCCAAGGATTGGGCAGCGGATCACGATTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: GGGRSRLGCWRW*PRIGQRITILR Trigger: ACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | GGTGGTGGTGGTCGCAGCCGTCTGGGTTGTTGGCGGTaGTGCCCAAGGATTGGGCAGCGGATCACGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGGRSRLGCWR*CPRIGQRITIL Trigger: GAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 90 bp | TGCTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTTGTaGGCGGTGGTGCCCAAGGATTGGGCAGCGGATCACGATTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: CLWSWWWWWSQPSGL*AVVPKDWAADHDSP Trigger: CGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 90 bp | CACTGCTTGTGGTCGTGGTGGTGGTGGTGGTCGCAGCCGTCTGGGTaGTTGGCGGTGGTGCCCAAGGATTGGGCAGCGGATCACGATTCT | + |
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Preference number: 6 (lower is better) Translates to: HCLWSWWWWWSQPSG*LAVVPKDWAADHDS Trigger: AGAATCGTGATCCGCTGCCCAATCCTTGGGCACCACCGCCAACAACCCAGACGGCTGCGACCACCACCACCACCACGACCACAAGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | GTGCCCAAGGATTGGGCAGCGGATCACGATTCTCCGTaGGGGAGGGCTGAGTACCTTCCCCTGAGGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VPKDWAADHDSP*GRAEYLPLRWN Trigger: GTTCCACCTCAGGGGAAGGTACTCAGCCCTCCCGCACGGAGAATCGTGATCCGCTGCCCAATCCTTGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | AGGAACTATAGGGCCGATGGGCCCTATGGGAGTGACTaGGCCCACAGGGGTTATGGCGGTTCCCAGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: RNYRADGPYGSD*AHRGYGGSQHS Trigger: GGAGTGCTGGGAACCGCCATAACCCCTGTGGGCCCAGTCACTCCCATAGGGCCCATCGGCCCTATAGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | GGATTCGAAGTGAACAGCGGGCTACTCAGCATCATCTaGGCCGCCATATCTGGATTCTGGCTCAGCGACTGC | + |
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Preference number: 6 (lower is better) Translates to: GFEVNSGLLSII*AAISGFWLSDC Trigger: GCAGTCGCTGAGCCAGAATCCAGATATGGCGGCCCAGATGATGCTGAGTAGCCCGCTGTTCACTTCGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 90 bp | CGGCGGCTGTGGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTTGTaGAATGAACTGCTGGTTGGGTCCAGATTCCGAGGTTGGACTTAT | + |
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Preference number: 6 (lower is better) Translates to: RRLWRASSSESLHHL*NELLVGSRFRGWTY Trigger: ATAAGTCCAACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCCACAGCCGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 90 bp | ATTCGGCGGCTGTGGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTaGTTGAATGAACTGCTGGTTGGGTCCAGATTCCGAGGTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: IRRLWRASSSESLHH*LNELLVGSRFRGWT Trigger: AGTCCAACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCCACAGCCGCCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | TCCAGATTCCGAGGTTGGACTTATGGTTTCAGTAGGTaGAGAGCTGGACACAGTGGTTGCAGGCGGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SRFRGWTYGFSR*RAGHSGCRRDA Trigger: GGCATCCCGCCTGCAACCACTGTGTCCAGCTCTGCACCTACTGAAACCATAAGTCCAACCTCGGAATCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 72 bp | GGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTTGTTaGATGAACTGCTGGTTGGGTCCAGATTCCGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GGLPPVRACTIC*MNCWLGPDSEV Trigger: AACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS GCA 72 bp | TTTGACATGGCCGCGATGGTTTCTGGATTCTGCATCTaGTGCAGGAAATTCGGGAGCTGTGGACGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: FDMAAMVSGFCI*CRKFGSCGRIC Trigger: GCAGATGCGTCCACAGCTCCCGAATTTCCTGCAGCAGATGCAGAATCCAGAAACCATCGCGGCCATGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 72 bp | TGGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTTGTaGAATGAACTGCTGGTTGGGTCCAGATTCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: WRASSSESLHHL*NELLVGSRFRG Trigger: ACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CAA 72 bp | CTGTGGAGGGCTTCCTCCAGTGAGAGCCTGCACCATTaGTTGAATGAACTGCTGGTTGGGTCCAGATTCCGA | + |
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Preference number: 6 (lower is better) Translates to: LWRASSSESLHH*LNELLVGSRFR Trigger: TCGGAATCTGGACCCAACCAGCAGTTCATTCAACAAATGGTGCAGGCTCTCACTGGAGGAAGCCCTCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS CCA 72 bp | TTGAATGAACTGCTGGTTGGGTCCAGATTCCGAGGTTaGACTTATGGTTTCAGTAGGTGCAGAGCTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LNELLVGSRFRG*TYGFSRCRAGH Trigger: GTGTCCAGCTCTGCACCTACTGAAACCATAAGTCCAACCTCGGAATCTGGACCCAACCAGCAGTTCATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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| CDS TCA 72 bp | TCTTTCAGGATCTTTCCGGCGAAAATCAGCACGAGCTaGTCGGTCTGCGATTTGAAGCGTTTGGAAATCGCT | + |
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Preference number: 6 (lower is better) Translates to: SFRIFPAKISTS*SVCDLKRLEIA Trigger: AGCGATTTCCAAACGCTTCAAATCGCAGACCGATCAGCTCGTGCTGATTTTCGCCGGAAAGATCCTGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060714.10 |
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