Pregenerated sensors for UBOX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027300Ensembl transcript IDs: ENSMUST00000028761.5, ENSMUST00000140581.3
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGCGCAGGCATAGAGTGGGGTGTGCAGGAGCCACCAGGCAGTaGAAGTGGCCTATCCATGCAGATCCTGGTGTCTCATACAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: GRRRHRVGCAGATRQ*KWPIHADPGVSYKG Trigger: GCCTTTGTATGAGACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACACCCCACTCTATGCCTGCGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR TCA 90 bp | TCAGACATGTCCTGTAAGGTACAGGGAGAGTGCTGGCTCTCAGACTaGCCCCCAGGGTCACAGTCACTCTCCATGGGCAAGGCTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SDMSCKVQGECWLSD*PPGSQSLSMGKAGA Trigger: TGCTCCAGCCTTGCCCATGGAGAGTGACTGTGACCCTGGGGGTCAGTCTGAGAGCCAGCACTCTCCCTGTACCTTACAGGACATGTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CCA 90 bp | CCACTGCCCGTCACATGGGTGATGCCGATCTTGAGGTGGGCCACATaGCTAAGGGAAAGAGCCCCTTTATTCCAGAGTTCCTGGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: PLPVTWVMPILRWAT*LRERAPLFQSSWAT Trigger: TGTAGCCCAGGAACTCTGGAATAAAGGGGCTCTTTCCCTTAGCCATGTGGCCCACCTCAAGATCGGCATCACCCATGTGACGGGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR TCA 90 bp | ACTGAGGTTACACTTCTCCAGAGTGCTCTGGTCAATGACCTTGCCTaGGGGCAGCAGCATGGGGCATGGCATGATCTCCAGGGTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: TEVTLLQSALVNDLA*GQQHGAWHDLQGDR Trigger: CCTATCACCCTGGAGATCATGCCATGCCCCATGCTGCTGCCCTCAGGCAAGGTCATTGACCAGAGCACTCTGGAGAAGTGTAACCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CCA 90 bp | TACAACAGCAGGAGAGAGGAGAGTGACTTCCATCGGGCTAAAAGGTaGCCTGGCCTTGAAGCCCCTGTGGCTGAACACCACATGGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: YNSRREESDFHRAKR*PGLEAPVAEHHMVL Trigger: CAGAACCATGTGGTGTTCAGCCACAGGGGCTTCAAGGCCAGGCCACCTTTTAGCCCGATGGAAGTCACTCTCCTCTCTCCTGCTGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CCA 90 bp | CAAGAGATGCCACTGCCCGTCACATGGGTGATGCCGATCTTGAGGTaGGCCACATGGCTAAGGGAAAGAGCCCCTTTATTCCAGAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: QEMPLPVTWVMPILR*ATWLRERAPLFQSS Trigger: GGAACTCTGGAATAAAGGGGCTCTTTCCCTTAGCCATGTGGCCCACCTCAAGATCGGCATCACCCATGTGACGGGCAGTGGCATCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR TCA 90 bp | GAGGTGGTTCAGAGGGTAGAGGAGACTGCCACACTGCTGATGACCTaGGGTTTTGGGAGCCACATAGTTGGAAAGAGTGAGCTGACCCCT | + |
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Preference number: 1 (lower is better) Translates to: EVVQRVEETATLLMT*GFGSHIVGKSELTP Trigger: AGGGGTCAGCTCACTCTTTCCAACTATGTGGCTCCCAAAACCTCAGGTCATCAGCAGTGTGGCAGTCTCCTCTACCCTCTGAACCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | AGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTaGAAGGGAACGGGACAGCGTGAGGACCTGTGCAGGTATCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSRGCDLSQDRAGHA*KGTGQREDLCRYPS Trigger: AGAAGGATACCTGCACAGGTCCTCACGCTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | AGATCCTGGTGTCTCATACAAAGGCTGAAGCACAACAGGCACTGGTaGCGTGTAGGAGGAAGGAGGTGGCATTCCCGTATTGGCTACCTC | + |
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Preference number: 1 (lower is better) Translates to: RSWCLIQRLKHNRHW*RVGGRRWHSRIGYL Trigger: GAGGTAGCCAATACGGGAATGCCACCTCCTTCCTCCTACACGCCACCAGTGCCTGTTGTGCTTCAGCCTTTGTATGAGACACCAGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | TGCAGATCCTGGTGTCTCATACAAAGGCTGAAGCACAACAGGCACTaGTGGCGTGTAGGAGGAAGGAGGTGGCATTCCCGTATTGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: CRSWCLIQRLKHNRH*WRVGGRRWHSRIGY Trigger: GTAGCCAATACGGGAATGCCACCTCCTTCCTCCTACACGCCACCAGTGCCTGTTGTGCTTCAGCCTTTGTATGAGACACCAGGATCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | GGTGGCCTGGCCTTGAAGCCCCTGTGGCTGAACACCACATGGTTCTaGTTTTTCAGTAAGACTTTGCCTACCAAGGTGAAGGCCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: GGLALKPLWLNTTWF*FFSKTLPTKVKASL Trigger: CAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCACAGGGGCTTCAAGGCCAGGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CCA 90 bp | TGGGCCACATGGCTAAGGGAAAGAGCCCCTTTATTCCAGAGTTCCTaGGCTACAACAGCAGGAGAGAGGAGAGTGACTTCCATCGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: WATWLRERAPLFQSS*ATTAGERRVTSIGL Trigger: TAGCCCGATGGAAGTCACTCTCCTCTCTCCTGCTGTTGTAGCCCAGGAACTCTGGAATAAAGGGGCTCTTTCCCTTAGCCATGTGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR TCA 90 bp | ACAGATGTCTCCACCGGGCCTGTAGTCCAGCAGTCCTGGGCATCCTaGGAGACTCTGCTAGATAAGGCAGATGTATATAATTCCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TDVSTGPVVQQSWAS*ETLLDKADVYNSRP Trigger: TGGCCTGGAATTATATACATCTGCCTTATCTAGCAGAGTCTCTCAGGATGCCCAGGACTGCTGGACTACAGGCCCGGTGGAGACATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR TCA 90 bp | GGGCAAGGCTGGAGCATGCAGATCCAAGTCCTGAGGCAGGCTTTCTaGGGCTATCAACAAGACACTATTTATCACCTCCTGAGAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: GQGWSMQIQVLRQAF*GYQQDTIYHLLRAG Trigger: ACCTGCTCTCAGGAGGTGATAAATAGTGTCTTGTTGATAGCCTCAGAAAGCCTGCCTCAGGACTTGGATCTGCATGCTCCAGCCTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR GCA 90 bp | GGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATTATCCTGTTGTTaGCTAAGCAGGAGTGGGATGTCCCTACCCAGTCTCCATAACACA | + |
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Preference number: 1 (lower is better) Translates to: GCLPQPSPMALLSCC*LSRSGMSLPSLHNT Trigger: TGTGTTATGGAGACTGGGTAGGGACATCCCACTCCTGCTTAGGCAACAACAGGATAATAAAGCCATAGGGCTGGGCTGGGGAAGACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | ATAACACACCATGAGGTATTCAAGCCCAAGAGAGAACAGAGGCACTaGGGTCCTGTTCTTGCTTCCTCCACCTTCAGGTCTCCCCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: ITHHEVFKPKREQRH*GPVLASSTFRSPPK Trigger: TTTTGGGGGAGACCTGAAGGTGGAGGAAGCAAGAACAGGACCCCAGTGCCTCTGTTCTCTCTTGGGCTTGAATACCTCATGGTGTGTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | TGTTTTCCTGATGTGGGTTACATATGGAACATGAATCCTCTCCCTTaGAGAGTGACTCCAGGAGCAGCCAGACATACTCTGGCACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: CFPDVGYIWNMNPLP*RVTPGAARHTLAPG Trigger: GCCAGGTGCCAGAGTATGTCTGGCTGCTCCTGGAGTCACTCTCCAAGGGAGAGGATTCATGTTCCATATGTAACCCACATCAGGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | GGAACGGGACAGCGTGAGGACCTGTGCAGGTATCCTTCTACTGGCTaGAAGCTCTTTCAAGCCAATAGGCAATCAATTTCTTTGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GTGQREDLCRYPSTG*KLFQANRQSISLRL Trigger: GAGCCTCAAAGAAATTGATTGCCTATTGGCTTGAAAGAGCTTCCAGCCAGTAGAAGGATACCTGCACAGGTCCTCACGCTGTCCCGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR GCA 90 bp | CCTGGAACACTGACTTCCATAGGTACACCAGGGCACACACGTGCCTaGACACATACAGAATTTGTTAAAAGCCTTTTCTATAAGCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PGTLTSIGTPGHTRA*THTEFVKSLFYKQV Trigger: CACTTGCTTATAGAAAAGGCTTTTAACAAATTCTGTATGTGTGCAGGCACGTGTGTGCCCTGGTGTACCTATGGAAGTCAGTGTTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CCA 90 bp | AAAGCCTTTTCTATAAGCAAGTGTTTTCCTGATGTGGGTTACATATaGAACATGAATCCTCTCCCTTGGAGAGTGACTCCAGGAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: KAFSISKCFPDVGYI*NMNPLPWRVTPGAA Trigger: GGCTGCTCCTGGAGTCACTCTCCAAGGGAGAGGATTCATGTTCCATATGTAACCCACATCAGGAAAACACTTGCTTATAGAAAAGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR TCA 90 bp | CTGCTAGATAAGGCAGATGTATATAATTCCAGGCCAGAGACATTCTaGTATCCCCCAGTTGTGAGATCTATATTAACCCTACAGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: LLDKADVYNSRPETF*YPPVVRSILTLQIS Trigger: GGAAATCTGTAGGGTTAATATAGATCTCACAACTGGGGGATATCAGAATGTCTCTGGCCTGGAATTATATACATCTGCCTTATCTAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CCA 90 bp | CCTACAGATTTCCACATTAAAGGGAAAGGAAACTGTCACATAGATTaGAGGTCTAATGAAATACTCTGTCCTAAAGCCATGGCTTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: PTDFHIKGKGNCHID*RSNEILCPKAMASF Trigger: AAAAGAAGCCATGGCTTTAGGACAGAGTATTTCATTAGACCTCCAATCTATGTGACAGTTTCCTTTCCCTTTAATGTGGAAATCTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCATTCTCTCTCAGGACTaGGTCCTGGGCAACCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CAGATRQCKWPIHADPGVILSQD*VLGNQG Trigger: CCCCTGGTTGCCCAGGACTCAGTCCTGAGAGAGAAT...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR GCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACACTGGGGTCCTGTTCTTaGTTCCTCCACCTTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTLGSCS*FLHLQV Trigger: GACCTGAAGGTGGAGGAAGCAAGAACAGGACCCCAG...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR TCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACAGCAGAGAAGGCTGTGTaGGGTCCCAAGTCAGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTAEKAV*GPKSVY Trigger: ATAGACTGACTTGGGACCTCACACAGCCTTCTCTGC...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACATTGCCTAAGCAGGAGTaGGATGTCCCTACCCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTLPKQE*DVPTQS Trigger: AGACTGGGTAGGGACATCCCACTCCTGCTTAGGCAA...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCACTCGGCCCCAAGCAGCTTCACTGAGGTTACACTTCTCCAGAGTGCTCTTTGCCTACCAAGGTaGAGGCCTCCTTGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TGHSAPSSFTEVTLLQSALCLPR*RPPCLG Trigger: TCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAG...AGCACTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGGGCCGAGTGCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCCTGGAACACTGACTTCCATAGGTACACCAGGGCACACACGTGCCTGCACAACCATGGTCCACTTCTaGGTGACCATGAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TPGTLTSIGTPGHTRACTTMVHF*VTMRQR Trigger: TCTCTGCCTCATGGTCACTCAGAAGTGGACCATGGT...TGTGCAGGCACGTGTGTGCCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCAAGTGTCTGCAGAGGTaGGGGTACACATGGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: CAGATRQCKWPIHADPGVKCLQR*GYTWLT Trigger: AGTTAGCCATGTGTACCCCCACCTCTGCAGACACTT...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR GCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTCTGATGGAAGCTGCTTaGCCTCCCTTGGCACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLLMEAA*PPLALA Trigger: TGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAG...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGAGTGAGGGCTGGCTCTaGTTGGGAAGTGACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQSEGWL*LGSDKV Trigger: CACCTTGTCACTTCCCAACCAGAGCCAGCCCTCACT...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CAA 90 bp | TTCTGGTTTTTCAGTAAGACTTTGCCTACCAAGGTGAAGGCCTCCTaGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCCAGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FWFFSKTLPTKVKAS*SGTDVSTGPVVQQS Trigger: GGACTGCTGGACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGAACGTCACTTTCCACCTCAGACATGTCCTGTAAGGTACAGGGAGAGTTGCAGATCCAAGTCCTaGGGCAGGCTTTCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLERHFPPQTCPVRYRESCRSKS*GRLSEA Trigger: AGCCTCAGAAAGCCTGCCTCAGGACTTGGATCTGCA...ACTCTCCCTGTACCTTACAGGACATGTCTGAGGTGGAAAGTGACGTTCCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGAAGGCTGCAAGTGTCTaGAGAGGTGGGGGTACACAT | + |
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Preference number: 2 (lower is better) Translates to: VGKSELTPGTLTSIGTPGKAASV*RGGGTH Trigger: ATGTGTACCCCCACCTCTGCAGACACTTGCAGCCTT...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGCACTCGGCCCCAAGCAGCTTCACTGAGGTTACACTTCTCCAGAGTGCTGTTGCAGTGAATTCTTaGTCTGAACTGTGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TGHSAPSSFTEVTLLQSAVAVNS*SELWEA Trigger: TGCCTCCCACAGTTCAGACCAAGAATTCACTGCAAC...AGCACTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGGGCCGAGTGCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CAA 90 bp | CCCCTGTGGCTGAACACCACATGGTTCTGGTTTTTCAGTAAGACTTaGCCTACCAAGGTGAAGGCCTCCTTGTCTGGGACAGATGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PLWLNTTWFWFFSKT*PTKVKASLSGTDVS Trigger: GGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCACAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTAGAGAACAGAGGCACTaGGGTCCTGTTCTTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLREQRH*GPVLAS Trigger: GGAAGCAAGAACAGGACCCCAGTGCCTCTGTTCTCT...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGATGAATCCTCTCCCTTaGAGAGTGACTCCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQMNPLP*RVTPGA Trigger: TGCTCCTGGAGTCACTCTCCAAGGGAGAGGATTCAT...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCTATCCTTCTACTGGCTaGAAGCTCTTTCAAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: CAGATRQCKWPIHADPGVYPSTG*KLFQAN Trigger: ATTGGCTTGAAAGAGCTTCCAGCCAGTAGAAGGATA...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCAGGAGGAATCCTTGTTaGATGTCAACTGTCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: CAGATRQCKWPIHADPGVRRNPC*MSTVTL Trigger: TAAAGTGACAGTTGACATTCAACAAGGATTCCTCCT...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGTGGGAAGTGACAAGGTaGGCCAGGGAGAGTAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQWEVTR*ARESRD Trigger: ATCCCTACTCTCCCTGGCCCACCTTGTCACTTCCCA...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGTGTATGCAGATAACATaGGGCACAGGGGAGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQCMQIT*GTGECS Trigger: GGAGCACTCCCCTGTGCCCCATGTTATCTGCATACA...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGAGGTGGGGGTACACATaGCTAACTCATGTGCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: VGKSELTPGTLTSIGTPGRWGYT*LTHVLN Trigger: GTTAAGCACATGAGTTAGCCATGTGTACCCCCACCT...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGTGAAGGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCTCTGTCCTAAAGCCATaGCTTCTTTTTATGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TKVKASLSGTDVSTGPVVSVLKP*LLFMRS Trigger: AGACCTCATAAAAAGAAGCCATGGCTTTAGGACAGA...GACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| 3UTR CAA 90 bp | CCAAGTCAGTCTATTGAGCTCCATCCACAAAGCTCCATTAGAAGGTaGTATGCAGATAACATGGGGCACAGGGGAGTGCTCCTGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: PSQSIELHPQSSIRR*YADNMGHRGVLLTS Trigger: ACTGGTCAGGAGCACTCCCCTGTGCCCCATGTTATCTGCATACAACCTTCTAATGGAGCTTTGTGGATGGAGCTCAATAGACTGACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR TCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTCACACTGAAGACATCTaGACCCTTGCTTATCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLHTEDI*TLAYPV Trigger: TACCGGATAAGCAAGGGTTCAGATGTCTTCAGTGTG...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGTGAAGGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCTACCATCTTAGTAACTaGAACAATAGCTTCCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TKVKASLSGTDVSTGPVVYHLSN*NNSFQA Trigger: TGCTTGGAAGCTATTGTTCCAGTTACTAAGATGGTA...GACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGAGTGACTTCCATCGGGCTAAAAGGTGGCCTGGCCTTGAAGCCCCTGTGGAACACCACATGGTTCTaGTTTTTCAGTAAGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RRVTSIGLKGGLALKPLWNTTWF*FFSKTL Trigger: CAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTT...CCACAGGGGCTTCAAGGCCAGGCCACCTTTTAGCCCGATGGAAGTCACTCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGCCCAAGTCAGTCTATTaGGCTCCATCCACAAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQPKSVY*APSTKL Trigger: GAGCTTTGTGGATGGAGCTCAATAGACTGACTTGGG...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGGGGAACTCTGAAAGCTaGTTCTCTCTCAGGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQGNSES*FSLRTE Trigger: CTCAGTCCTGAGAGAGAATCAGCTTTCAGAGTTCCC...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTATTTCCTGGGAACTCTaGAAGCTGATTCTCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLISWEL*KLILSQ Trigger: CTGAGAGAGAATCAGCTTTCAGAGTTCCCAGGAAAT...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGGATGTGGGTTACATATaGAACATGAATCCTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQDVGYI*NMNPLP Trigger: AGGGAGAGGATTCATGTTCCATATGTAACCCACATC...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CCA 90 bp | TCGGCCCCAAGCAGCTTCACTGAGGTTACACTTCTCCAGAGTGCTCTGGTCAATTCTTGGTCTGAACTGTaGGAGGCAAAGATTTACTAC | + |
|
Preference number: 2 (lower is better) Translates to: SAPSSFTEVTLLQSALVNSWSEL*EAKIYY Trigger: GTAGTAAATCTTTGCCTCCCACAGTTCAGACCAAGA...ATTGACCAGAGCACTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGGGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGGCCCCAAGCAGCTTCACTGAGGTTACACTTCTCCAGAGTGCTCTGGTCAATTGGCTGAACACCACATaGTTCTGGTTTTTCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SAPSSFTEVTLLQSALVNWLNTT*FWFFSK Trigger: CTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCA...ATTGACCAGAGCACTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGGGCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTTTATTATCCTGTTGTTaGCTAAGCAGGAGTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLLLSCC*LSRSGM Trigger: CATCCCACTCCTGCTTAGGCAACAACAGGATAATAA...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CCA 90 bp | TCGGCCCCAAGCAGCTTCACTGAGGTTACACTTCTCCAGAGTGCTCTGGTCAATAGAAGCAGCCTGAGTTaGAAGGAATCCACATTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SAPSSFTEVTLLQSALVNRSSLS*KESTLN Trigger: ATTTAATGTGGATTCCTTCCAACTCAGGCTGCTTCT...ATTGACCAGAGCACTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGGGCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CAA 90 bp | TTAGTAACTGGAACAATAGCTTCCAAGCATCAGAAGCAGCCTGAGTaGGAAGGAATCCACATTAAATTATCTTCATCGTCAGCCTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LVTGTIASKHQKQPE*EGIHIKLSSSSASV Trigger: CACTGAGGCTGACGATGAAGATAATTTAATGTGGATTCCTTCCAACTCAGGCTGCTTCTGATGCTTGGAAGCTATTGTTCCAGTTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CAA 90 bp | TCAGTGTCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTaGAACTCACAGCAGTTCTTTAGATGTTTGGATTTACAAACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SVSLRKEFAMWPRLT*NSQQFFRCLDLQTY Trigger: GTAAGTTTGTAAATCCAAACATCTAAAGAACTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGACACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTGAGGGCTGGCTCTGGTaGGGAAGTGACAAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RVGRVPLVELQRGSSLGVEGWLW*GSDKVG Trigger: GCCCACCTTGTCACTTCCCAACCAGAGCCAGCCCTC...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR GCA 72 bp | AGCCAGACATACTCTGGCACCTGGCCTGATGGAAGCTaGTTGCCCTCCCTTGGCACTGGCACACCCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: SQTYSGTWPDGS*LPSLGTGTPTL Trigger: CAGTGTGGGTGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTATGTCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | AGTGACTCCAGGAGCAGCCAGACATACTCTGGCACCTaGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SDSRSSQTYSGT*PDGSCLPSLGT Trigger: AGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTATGTCTGGCTGCTCCTGGAGTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | ACCCCCAGGGTCACAGTCACTCTCCATGGGCAAGGCTaGAGCATGCAGATCCAAGTCCTGAGGCAGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TPRVTVTLHGQG*SMQIQVLRQAF Trigger: GAAAGCCTGCCTCAGGACTTGGATCTGCATGCTCCAGCCTTGCCCATGGAGAGTGACTGTGACCCTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCACTGGGGTCCTGTTCTaGCTTCCTCCACCTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CAGATRQCKWPIHADPGVTGVLF*LPPPSG Trigger: ACCTGAAGGTGGAGGAAGCAAGAACAGGACCCCAGT...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGCCTGATGGAAGCTGCTaGCCCTCCCTTGGCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGKSELTPGTLTSIGTPGPDGSC*PSLGTG Trigger: GCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGG...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | GCTGCTTGCCCTCCCTTGGCACTGGCACACCCACACTaGAGACATCTGAACCCTTGCTTATCCGGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AACPPLALAHPH*RHLNPCLSGSS Trigger: GCTGCTACCGGATAAGCAAGGGTTCAGATGTCTTCAGTGTGGGTGTGCCAGTGCCAAGGGAGGGCAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | TCCTGTAAGGTACAGGGAGAGTGCTGGCTCTCAGACTaGCCCCCAGGGTCACAGTCACTCTCCATGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCKVQGECWLSD*PPGSQSLSMGK Trigger: CTTGCCCATGGAGAGTGACTGTGACCCTGGGGGTCAGTCTGAGAGCCAGCACTCTCCCTGTACCTTACAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR GCA 72 bp | GGGATCCGAGGAGGTGGTTCAGAGGGTAGAGGAGACTaGCACACTGCTGATGACCTGAGGTTTTGGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GIRGGGSEGRGD*HTADDLRFWEP Trigger: TGGCTCCCAAAACCTCAGGTCATCAGCAGTGTGGCAGTCTCCTCTACCCTCTGAACCACCTCCTCGGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR GCA 72 bp | AGGCATAGAGTGGGGTGTGCAGGAGCCACCAGGCAGTaGAAGTGGCCTATCCATGCAGATCCTGGTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHRVGCAGATRQ*KWPIHADPGVS Trigger: TGAGACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACACCCCACTCTATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | AGGAGAGAGGAGAGTGACTTCCATCGGGCTAAAAGGTaGCCTGGCCTTGAAGCCCCTGTGGCTGAACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RREESDFHRAKR*PGLEAPVAEHH Trigger: GTGGTGTTCAGCCACAGGGGCTTCAAGGCCAGGCCACCTTTTAGCCCGATGGAAGTCACTCTCCTCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCCAGCAGTCCTGCCTCAGTGTTACCTCTaGCCTTCGATCTGGTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: GLLVWDRCLHRACSPAVLPQCYL*PSIWYL Trigger: AAGATACCAGATCGAAGGCAAGAGGTAACACTGAGG...CAGGACTGCTGGACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CCA 72 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTaGAAGGGAACGGGACAGCGTGAGGACCTGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCDLSQDRAGHA*KGTGQREDLCR Trigger: CCTGCACAGGTCCTCACGCTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | CCACTGCCCGTCACATGGGTGATGCCGATCTTGAGGTaGGCCACATGGCTAAGGGAAAGAGCCCCTTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPVTWVMPILR*ATWLRERAPLF Trigger: GAATAAAGGGGCTCTTTCCCTTAGCCATGTGGCCCACCTCAAGATCGGCATCACCCATGTGACGGGCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CAA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACATCCCAAGTCAGTCTATaGAGCTCCATCCACAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTSQVSL*SSIHKA Trigger: AGCTTTGTGGATGGAGCTCAATAGACTGACTTGGGA...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR GCA 72 bp | TGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATaGAGATCCTGGTGTCTCATACAAAGGCTGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CRSHQAVQVAYP*RSWCLIQRLKH Trigger: GTGCTTCAGCCTTTGTATGAGACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | TGGTGTCTCATACAAAGGCTGAAGCACAACAGGCACTaGTGGCGTGTAGGAGGAAGGAGGTGGCATTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: WCLIQRLKHNRH*WRVGGRRWHSR Trigger: ACGGGAATGCCACCTCCTTCCTCCTACACGCCACCAGTGCCTGTTGTGCTTCAGCCTTTGTATGAGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | AGAGTGGGGTGTGCAGGAGCCACCAGGCAGTGCAAGTaGCCTATCCATGCAGATCCTGGTGTCTCATACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RVGCAGATRQCK*PIHADPGVSYK Trigger: TTTGTATGAGACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACACCCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | GGTGTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATaGGCTAAGAACACACCACTTAGAAGGGAGGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVNPQSKPSVVA*AKNTPLRREAQ Trigger: CTGCGCCTCCCTTCTAAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | AAACGCTTGATGCAAGAGATGCCACTGCCCGTCACATaGGTGATGCCGATCTTGAGGTGGGCCACATGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KRLMQEMPLPVT*VMPILRWATWL Trigger: TAGCCATGTGGCCCACCTCAAGATCGGCATCACCCATGTGACGGGCAGTGGCATCTCTTGCATCAAGCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR TCA 72 bp | CTCATGTGCTTAACAGCCCCTACCATGGTCCACTTCTaGGTGACCATGAGGCAGAGAAGGCTGTGTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LMCLTAPTMVHF*VTMRQRRLCEV Trigger: GACCTCACACAGCCTTCTCTGCCTCATGGTCACTCAGAAGTGGACCATGGTAGGGGCTGTTAAGCACATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | GTGGCGTGTAGGAGGAAGGAGGTGGCATTCCCGTATTaGCTACCTCTATGGAGAGATTTCCTGGGAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VACRRKEVAFPY*LPLWRDFLGTL Trigger: CAGAGTTCCCAGGAAATCTCTCCATAGAGGTAGCCAATACGGGAATGCCACCTCCTTCCTCCTACACGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | TGGGAAGTGGGTTACTCCAGAGACCGTGACAGGTTATaGGTAGGTGTCAACCCCCAAAGCAAGCCCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WEVGYSRDRDRL*VGVNPQSKPSV Trigger: TACAGAGGGCTTGCTTTGGGGGTTGACACCTACCCATAACCTGTCACGGTCTCTGGAGTAACCCACTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGAGAGTGACTTCCATCGGGCTAAAAGGTGGCCTGGCCTTGAAGCCCCTGCAGAAGCAGCCTGAGTaGGAAGGAATCCACATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ERRVTSIGLKGGLALKPLQKQPE*EGIHIK Trigger: TTTAATGTGGATTCCTTCCAACTCAGGCTGCTTCTG...CAGGGGCTTCAAGGCCAGGCCACCTTTTAGCCCGATGGAAGTCACTCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR TCA 72 bp | CTCCCTTGGCACTGGCACACCCACACTGAAGACATCTaGACCCTTGCTTATCCGGTAGCAGCAACTGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: LPWHWHTHTEDI*TLAYPVAATAY Trigger: ATATGCAGTTGCTGCTACCGGATAAGCAAGGGTTCAGATGTCTTCAGTGTGGGTGTGCCAGTGCCAAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | CAGAGGGTAGAGGAGACTGCCACACTGCTGATGACCTaGGGTTTTGGGAGCCACATAGTTGGAAAGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRVEETATLLMT*GFGSHIVGKSE Trigger: CTCACTCTTTCCAACTATGTGGCTCCCAAAACCTCAGGTCATCAGCAGTGTGGCAGTCTCCTCTACCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | CATGAGGTATTCAAGCCCAAGAGAGAACAGAGGCACTaGGGTCCTGTTCTTGCTTCCTCCACCTTCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HEVFKPKREQRH*GPVLASSTFRS Trigger: AGACCTGAAGGTGGAGGAAGCAAGAACAGGACCCCAGTGCCTCTGTTCTCTCTTGGGCTTGAATACCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGCATGAATCCTCTCCCTaGGAGAGTGACTCCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQHESSP*ESDSRS Trigger: GCTCCTGGAGTCACTCTCCAAGGGAGAGGATTCATG...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGGGCTTTATTATCCTGTaGTTGCCTAAGCAGGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGKSELTPGTLTSIGTPGGFIIL*LPKQEW Trigger: CCACTCCTGCTTAGGCAACAACAGGATAATAAAGCC...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | GACCTGAGGTTTTGGGAGCCACATAGTTGGAAAGAGTaGGCTGACCCCTGGAACACTGACTTCCATAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DLRFWEPHSWKE*ADPWNTDFHRY Trigger: GTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAACTATGTGGCTCCCAAAACCTCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | ACCTCTATGGAGAGATTTCCTGGGAACTCTGAAAGCTaGTTCTCTCTCAGGACTGAGTCCTGGGCAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSMERFPGNSES*FSLRTESWATR Trigger: CCTGGTTGCCCAGGACTCAGTCCTGAGAGAGAATCAGCTTTCAGAGTTCCCAGGAAATCTCTCCATAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | GGTTCTGGTTTTTCAGTAAGACTTTGCCTACCAAGGTaGAGGCCTCCTTGTCTGGGACAGATGTCTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: GSGFSVRLCLPR*RPPCLGQMSPP Trigger: CGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CCA 72 bp | GATGTGGGTTACATATGGAACATGAATCCTCTCCCTTaGAGAGTGACTCCAGGAGCAGCCAGACATACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DVGYIWNMNPLP*RVTPGAARHTL Trigger: CAGAGTATGTCTGGCTGCTCCTGGAGTCACTCTCCAAGGGAGAGGATTCATGTTCCATATGTAACCCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CCA 72 bp | GCCTTGAAGCCCCTGTGGCTGAACACCACATGGTTCTaGTTTTTCAGTAAGACTTTGCCTACCAAGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALKPLWLNTTWF*FFSKTLPTKVK Trigger: CTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCACAGGGGCTTCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGTTTATTATCCTGTTGTaGCCTAAGCAGGAGTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGKSELTPGTLTSIGTPGFIILL*PKQEWD Trigger: ATCCCACTCCTGCTTAGGCAACAACAGGATAATAAA...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | TGGAGCATGCAGATCCAAGTCCTGAGGCAGGCTTTCTaGGGCTATCAACAAGACACTATTTATCACCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WSMQIQVLRQAF*GYQQDTIYHLL Trigger: CAGGAGGTGATAAATAGTGTCTTGTTGATAGCCTCAGAAAGCCTGCCTCAGGACTTGGATCTGCATGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CCA 72 bp | CAGCGTGAGGACCTGTGCAGGTATCCTTCTACTGGCTaGAAGCTCTTTCAAGCCAATAGGCAATCAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QREDLCRYPSTG*KLFQANRQSIS Trigger: AGAAATTGATTGCCTATTGGCTTGAAAGAGCTTCCAGCCAGTAGAAGGATACCTGCACAGGTCCTCACGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGAATCCACATTAAATTATCTTCATCGTCAGCCTCAGTGTTACCTCTTGCCAGGGACTGTGGCAGATaGTATCCCATACCTGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGIHIKLSSSSASVLPLARDCGR*YPIPDS Trigger: GCTATCAGGTATGGGATACAATCTGCCACAGTCCCT...GGCAAGAGGTAACACTGAGGCTGACGATGAAGATAATTTAATGTGGATTCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR GCA 72 bp | CTGACTTCCATAGGTACACCAGGGCACACACGTGCCTaGACACATACAGAATTTGTTAAAAGCCTTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSIGTPGHTRA*THTEFVKSLFY Trigger: ATAGAAAAGGCTTTTAACAAATTCTGTATGTGTGCAGGCACGTGTGTGCCCTGGTGTACCTATGGAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR TCA 72 bp | AAGGCAGATGTATATAATTCCAGGCCAGAGACATTCTaGTATCCCCCAGTTGTGAGATCTATATTAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KADVYNSRPETF*YPPVVRSILTL Trigger: TAGGGTTAATATAGATCTCACAACTGGGGGATATCAGAATGTCTCTGGCCTGGAATTATATACATCTGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| 3UTR CCA 72 bp | TTCCACATTAAAGGGAAAGGAAACTGTCACATAGATTaGAGGTCTAATGAAATACTCTGTCCTAAAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FHIKGKGNCHID*RSNEILCPKAM Trigger: CATGGCTTTAGGACAGAGTATTTCATTAGACCTCCAATCTATGTGACAGTTTCCTTTCCCTTTAATGTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| CDS-3UTR GCA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTCACTGCTCCCTCTTGTaGCCAGCTGGAGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGRVPLVELQRGSSLGVHCSLL*PAGAAL Trigger: AAGGGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTG...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTCTATTTATCACCTCCTaGGAGCAGGTCCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGRVPLVELQRGSSLGVLFITS*EQVLAG Trigger: GCCAGCCAGGACCTGCTCTCAGGAGGTGATAAATAG...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCGGTCGGCACAGAAGGTaGCCACAGGGCAGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CAGATRQCKWPIHADPGVGRHRR*PQGSWY Trigger: GTACCAGCTGCCCTGTGGTCACCTTCTGTGCCGACC...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTGCCTTGAAGCCCCTGTaGCTGAACACCACATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGRVPLVELQRGSSLGVALKPL*LNTTWF Trigger: GAACCATGTGGTGTTCAGCCACAGGGGCTTCAAGGC...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCCCTGAGAGCAGGTCCTaGCTGGCTGACCCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGATRQCKWPIHADPGVPESRS*LADPTP Trigger: AGGTGTGGGGTCAGCCAGCCAGGACCTGCTCTCAGG...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTCAGCAGCATGGGGCATaGCATGATCTCCAGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGRVPLVELQRGSSLGVQQHGA*HDLQGD Trigger: ATCACCCTGGAGATCATGCCATGCCCCATGCTGCTG...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACATTGGATGCTCGGAGCTaGAGGCTGGCCTCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTLDARS*RLASCK Trigger: CTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAA...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACAGAGTGCTCTGGTCAATaGCCTTGCCTGAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTECSGQ*PCLRAA Trigger: TGCTGCCCTCAGGCAAGGTCATTGACCAGAGCACTC...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACAGAAGGCCTCCTTGTCTaGGACAGATGTCTCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTEGLLV*DRCLHR Trigger: CCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTC...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCATCCTGGCTGGTGACTaGCTGCCGACAGGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAGATRQCKWPIHADPGVILAGD*LPTGCA Trigger: TGCACAGCCTGTCGGCAGCCAGTCACCAGCCAGGAT...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTAGGCCGGGTACCTCTGGTAGAGCTGCAGAGGGGCAGCAGCCTGGGGGTTAGGCCAGAGACATTCTaGTATCCCCCAGTTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGRVPLVELQRGSSLGVRPETF*YPPVVR Trigger: TCTCACAACTGGGGGATATCAGAATGTCTCTGGCCT...AACCCCCAGGCTGCTGCCCCTCTGCAGCTCTACCAGAGGTACCCGGCCTACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATGCCAAGGCTGTAGTGTaGGCTGTGTTCAGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYAKAVV*AVFSLL Trigger: GAGCAGGCTGAACACAGCTCACACTACAGCCTTGGC...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TACTCTGGCACCTGGCCTGATGGAAGCTGCTTGCCCTCCCTTGGCACTGGCACAGGCCAAGCTCACTGGTaGCTTTCATCTTCTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTWPDGSCLPSLGTGTGQAHW*LSSSWQ Trigger: CTGCCAAGAAGATGAAAGCCACCAGTGAGCTTGGCC...TGTGCCAGTGCCAAGGGAGGGCAAGCAGCTTCCATCAGGCCAGGTGCCAGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATGCCAGCTTCTGCTCATaGGACACTGGACCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYASFCS*DTGPAE Trigger: TTCAGCAGGTCCAGTGTCCCATGAGCAGAAGCTGGC...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGCTCGGAGCTGGAGGCTaGCCTCCTGCAAGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQLGAGG*PPASTA Trigger: AGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAG...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCCAGCCTGAAATAGAGTaGTGGAGTAGGAACCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CAGATRQCKWPIHADPGVQPEIE*WSRNRS Trigger: CGACCGGTTCCTACTCCAGCACTCTATTTCAGGCTG...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATAGGAAGACGCACTCATaGCAAGGCTGTAGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYRKTHS*QGCSVS Trigger: GCTCACACTACAGCCTTGGCATGAGTGCGTCTTCCT...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGTGGCTGGTGACTGGCTaGCGACAGGCTGTGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQWLVTG*RQAVHI Trigger: GATGTGCACAGCCTGTCGGCAGCCAGTCACCAGCCA...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGGAACACTGACTTCCATAGGTACACCAGGGCACACACGTGCCTGCACACTCCATGGGCAAGGCTaGAGCATGCAGATCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGTLTSIGTPGHTRACTLHGQG*SMQIQV Trigger: GACTTGGATCTGCATGCTCCAGCCTTGCCCATGGAG...TGTGCAGGCACGTGTGTGCCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATGTGCACATCATGGGCTaGGAACGTTGCTTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYVHIMG*ERCFSL Trigger: GAGTGAGAAGCAACGTTCCCAGCCCATGATGTGCAC...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTTGGAGGCTGGCCTCCTaGAAGCACTGCTCCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLWRLAS*KHCSLL Trigger: CAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCA...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATTTCTCCAGAGTGCTCTaGTCAATGACCTTGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYFSRVL*SMTLPE Trigger: CTCAGGCAAGGTCATTGACCAGAGCACTCTGGAGAA...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGCTTTGCCTACCAAGGTaGAGGCCTCCTTGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQLCLPR*RPPCLG Trigger: TCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAG...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | GGAGTGGGATGTCCCTACCCAGTCTCCATAACACACCATGAGGTATTCAAGCCCTGCAGATCCAAGTCCTaGGGCAGGCTTTCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGCPYPVSITHHEVFKPCRSKS*GRLSEA Trigger: AGCCTCAGAAAGCCTGCCTCAGGACTTGGATCTGCA...GGGCTTGAATACCTCATGGTGTGTTATGGAGACTGGGTAGGGACATCCCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGGCCTCCTGCAAGCACTaGTCCCTCTTGTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQASCKH*SLLCPA Trigger: AGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGC...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGTTGAGGTGGGCCACATaGCTAAGGGAAAGAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQLRWAT*LRERAP Trigger: AGGGGCTCTTTCCCTTAGCCATGTGGCCCACCTCAA...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCCAGGGAGAGTAGGGATGTCTTCCCCAGCCCAGCCCTATGGCTTTATAGAATAAAGGGCTTGTaGCAGAGGAAGACGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RWARESRDVFPSPALWLYRIKGL*QRKTHS Trigger: TGAGTGCGTCTTCCTCTGCCACAAGCCCTTTATTCT...ATAAAGCCATAGGGCTGGGCTGGGGAAGACATCCCTACTCTCCCTGGCCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CAA 72 bp | TCCCCAGCCCAGCCCTATGGCTTTATTATCCTGTTGTaGCCTAAGCAGGAGTGGGATGTCCCTACCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAQPYGFIILL*PKQEWDVPTQS Trigger: AGACTGGGTAGGGACATCCCACTCCTGCTTAGGCAACAACAGGATAATAAAGCCATAGGGCTGGGCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| 3UTR CAA 72 bp | TTCAGTAAGACTTTGCCTACCAAGGTGAAGGCCTCCTaGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSKTLPTKVKAS*SGTDVSTGPVV Trigger: GACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGTGCTGGCTCTCAGACTaGCCCCCAGGGTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQCWLSD*PPGSQS Trigger: TGACTGTGACCCTGGGGGTCAGTCTGAGAGCCAGCA...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTAGAAGGGGTCATTGCTaGTGGAGTCTGTGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLRRGHC*WSLCSP Trigger: GGGAGAGCACAGACTCCATCAGCAATGACCCCTTCT...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | ACCCCTGGAACACTGACTTCCATAGGTACACCAGGGCACACACGTGCCTGCACAAAGAAAATGCTTGTTTaGAGGAGGCACACTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGTLTSIGTPGHTRACTKKMLV*RRHTLG Trigger: GCCCAGAGTGTGCCTCCTGCAAACAAGCATTTTCTT...TGTGCAGGCACGTGTGTGCCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGGATGTCCCTACCCAGTCTCCATAACACACCATGAGGTATTCAAGCCCAGGCTGTGCACATCATaGGCTGGGAACGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGCPYPVSITHHEVFKPRLCTS*AGNVAS Trigger: AGAAGCAACGTTCCCAGCCCATGATGTGCACAGCCT...GGGCTTGAATACCTCATGGTGTGTTATGGAGACTGGGTAGGGACATCCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCTGGCTGAACACCACATaGTTCTGGTTTTTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAGATRQCKWPIHADPGVWLNTT*FWFFSK Trigger: CTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCA...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGCATCGGGCTAAAAGGTaGCCTGGCCTTGAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQHRAKR*PGLEAP Trigger: AGGGGCTTCAAGGCCAGGCCACCTTTTAGCCCGATG...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGCACAGTCACTCTCCATaGGCAAGGCTGGAGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQHSHSP*ARLEHA Trigger: TGCATGCTCCAGCCTTGCCCATGGAGAGTGACTGTG...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGTTCTGTTCTGTGTGCTAGGAGGAATCCTTGTTGAATGTCAACTGTCAGCTGCCGACAGGCTGTaGACATCATGGGCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MAVLFCVLGGILVECQLSAADRL*TSWAGN Trigger: GTTCCCAGCCCATGATGTGCACAGCCTGTCGGCAGC...TGACAGTTGACATTCAACAAGGATTCCTCCTAGCACACAGAACAGAACAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGGTTGCAGTGAATTCTTaGTCTGAACTGTGGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGKSELTPGTLTSIGTPGVAVNS*SELWEA Trigger: TGCCTCCCACAGTTCAGACCAAGAATTCACTGCAAC...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR TCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGCCCAAGCAGCTTCACTaGGGTTACACTTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQPKQLH*GYTSPE Trigger: CTCTGGAGAAGTGTAACCTCAGTGAAGCTGCTTGGG...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTGAGCTGTGTTCAGCCTaGTCTGTCTTCCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLELCSA*SVFLFL Trigger: AAGGAAAAGGAAGACAGAGCAGGCTGAACACAGCTC...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGGCAATTTCCAGACTTTaGGCCAGCTTCTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQAISRL*ASFCSW Trigger: CCATGAGCAGAAGCTGGCGCAAAGTCTGGAAATTGC...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTTTATTCCAGAGTTCCTaGGCTACAACAGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLLFQSS*ATTAGE Trigger: CTCTCCTGCTGTTGTAGCCCAGGAACTCTGGAATAA...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGCCTGAAATAGAGTGCTaGAGTAGGAACCGGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQPEIEC*SRNRSI Trigger: GATCGACCGGTTCCTACTCCAGCACTCTATTTCAGG...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGTCAGGCCAAGCTCACTaGTGGCTTTCATCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQSGQAH*WLSSSW Trigger: CCAAGAAGATGAAAGCCACCAGTGAGCTTGGCCTGA...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR TCA 90 bp | GTCAACCCCCAAAGCAAGCCCTCTGTAGTTGCATGGGCTAAGAACACACCACTTGACACCTTGTTGCAGTaGATTCTTGGTCTGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: VNPQSKPSVVAWAKNTPLDTLLQ*ILGLNC Trigger: ACAGTTCAGACCAAGAATTCACTGCAACAAGGTGTC...AAGTGGTGTGTTCTTAGCCCATGCAACTACAGAGGGCTTGCTTTGGGGGTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR GCA 90 bp | ATGGCTGTTCTGTTCTGTGTGCTAGGAGGAATCCTTGTTGAATGTCAACTGTCAATGGGCTGGGAACGTTaGTTCTCACTCAGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MAVLFCVLGGILVECQLSMGWER*FSLRQG Trigger: ACCCTGCCTGAGTGAGAAGCAACGTTCCCAGCCCAT...TGACAGTTGACATTCAACAAGGATTCCTCCTAGCACACAGAACAGAACAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| 3UTR CAA 72 bp | CTGAACACCACATGGTTCTGGTTTTTCAGTAAGACTTaGCCTACCAAGGTGAAGGCCTCCTTGTCTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LNTTWFWFFSKT*PTKVKASLSGT Trigger: TGTCCCAGACAAGGAGGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR TCA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGAGTGAATTCTTGGTCTaGACTGTGGGAGGCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQSEFLV*TVGGKD Trigger: ATCTTTGCCTCCCACAGTTCAGACCAAGAATTCACT...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR TCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGTGTCTTCCTTTTCCTTaGGGGCAGGGTAATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQCLPFP*GQGNDR Trigger: TCTGTCATTACCCTGCCCTCAAGGAAAAGGAAGACA...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTGATTTATCTCAAGACAGAGCAGGTCATGCCTGGAAGGGAACGGGACAGTCTGTCCTAAAGCCATaGCTTCTTTTTATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCDLSQDRAGHAWKGTGQSVLKP*LLFMRS Trigger: AGACCTCATAAAAAGAAGCCATGGCTTTAGGACAGA...CTGTCCCGTTCCCTTCCAGGCATGACCTGCTCTGTCTTGAGATAAATCACAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGTCTTGGTCTGAACTGTaGGAGGCAAAGATTTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQSWSEL*EAKIYY Trigger: GTAGTAAATCTTTGCCTCCCACAGTTCAGACCAAGA...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CCA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGAACTGTCACATAGATTaGAGGTCTAATGAAATACTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKSELTPGTLTSIGTPGNCHID*RSNEIL Trigger: GAGTATTTCATTAGACCTCCAATCTATGTGACAGTT...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CCA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGAACACCACATGGTTCTaGTTTTTCAGTAAGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQNTTWF*FFSKTL Trigger: CAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTT...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 90 bp | GCTGGCCTCCTGCAAGCACTGCTCCCTCTTGTGCCCAGCTGGAGCTaGCCTTTGGTGAGCCGGGCAGTGAAGGAAGGCATGGAGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLQALLPLVPSWS*PLVSRAVKEGMEPR Trigger: CCTTGGCTCCATGCCTTCCTTCACTGCCCGGCTCACCAAAGGGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 90 bp | GGCCAGAAACACTCCTTGGATGCTCGGAGCTGGAGGCTGGCCTCCTaGAAGCACTGCTCCCTCTTGTGCCCAGCTGGAGCTGCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQKHSLDARSWRLAS*KHCSLLCPAGAALW Trigger: CCAAAGGGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTGTTTCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CCA 90 bp | ACACTCTGGGCCAGAAACACTCCTTGGATGCTCGGAGCTGGAGGCTaGCCTCCTGCAAGCACTGCTCCCTCTTGTGCCCAGCTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWARNTPWMLGAGG*PPASTAPSCAQLEL Trigger: CAGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTGTTTCTGGCCCAGAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CCA 90 bp | AGGAGGCACACTCTGGGCCAGAAACACTCCTTGGATGCTCGGAGCTaGAGGCTGGCCTCCTGCAAGCACTGCTCCCTCTTGTGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRHTLGQKHSLDARS*RLASCKHCSLLCPA Trigger: AGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTGTTTCTGGCCCAGAGTGTGCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGAAAAGAGTTTGCTATGTGGCCCAGGCTGACCTTGAACTCACAGCAGAAGCACTGCTCCCTCTaGTGCCCAGCTGGAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRKEFAMWPRLTLNSQQKHCSL*CPAGAA Trigger: GGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTT...CTGCTGTGAGTTCAAGGTCAGCCTGGGCCACATAGCAAACTCTTTTCTCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCCAGCAGTCCTGCAGGTCCTGTGGTACTaGACGATTTTCACCTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLLVWDRCLHRACSPAVLQVLWY*TIFTYN Trigger: ATTATAGGTGAAAATCGTCAAGTACCACAGGACCTG...CAGGACTGCTGGACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGATGTCCCTACCCAGTCTCCATAACACACCATGAGGTATTCAAGCCCGGCAATTTCCAGACTTaGCGCCAGCTTCTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: GVGCPYPVSITHHEVFKPGNFQT*RQLLLM Trigger: CATGAGCAGAAGCTGGCGCAAAGTCTGGAAATTGCC...GGGCTTGAATACCTCATGGTGTGTTATGGAGACTGGGTAGGGACATCCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | TGTGCAGGAGCCACCAGGCAGTGCAAGTGGCCTATCCATGCAGATCCTGGTGTCGGTACACAGGCTCATTaGTGGAGTAGGAAGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: CAGATRQCKWPIHADPGVGTQAH*WSRKKM Trigger: CATTTTCTTCCTACTCCACAAATGAGCCTGTGTACC...GACACCAGGATCTGCATGGATAGGCCACTTGCACTGCCTGGTGGCTCCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 90 bp | GCTGGTACACAGGCTCATTTGTGGAGTAGGAAGAAAATGCTTGTTTaGAGGAGGCACACTCTGGGCCAGAAACACTCCTTGGATGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGTQAHLWSRKKMLV*RRHTLGQKHSLDAR Trigger: CCGAGCATCCAAGGAGTGTTTCTGGCCCAGAGTGTGCCTCCTGCAAACAAGCATTTTCTTCCTACTCCACAAATGAGCCTGTGTACCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | CAGGGGAGACAACATGTAGCTCAAGGGGCTGTGATTTATCTCAAGACAGAGCAGAAGGTGAAGGCCTCCTaGTCTGGGACAGATGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGRQHVAQGAVIYLKTEQKVKAS*SGTDVS Trigger: GGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTT...CTGCTCTGTCTTGAGATAAATCACAGCCCCTTGAGCTACATGTTGTCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | GTTGGAAAGAGTGAGCTGACCCCTGGAACACTGACTTCCATAGGTACACCAGGGGAAGAAAATGCTTGTTaGCAGGAGGCACACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGKSELTPGTLTSIGTPGEENAC*QEAHSG Trigger: CCCAGAGTGTGCCTCCTGCAAACAAGCATTTTCTTC...CCCTGGTGTACCTATGGAAGTCAGTGTTCCAGGGGTCAGCTCACTCTTTCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCCAGCAGTCCTGCTAGATTCCACAGATTaGCAGATGTTTCTTGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLLVWDRCLHRACSPAVLLDSTD*QMFLVE Trigger: TTCAACAAGAAACATCTGCAAATCTGTGGAATCTAG...CAGGACTGCTGGACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | ACCAAGGTGAAGGCCTCCTTGTCTGGGACAGATGTCTCCACCGGGCCTGTAGTCTGGCTGGAGTTTATTTaGGTAGAATGTGACTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKVKASLSGTDVSTGPVVWLEFI*VECDFV Trigger: CACAAAGTCACATTCTACCAAAATAAACTCCAGCCA...GACTACAGGCCCGGTGGAGACATCTGTCCCAGACAAGGAGGCCTTCACCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGATGTCCCTACCCAGTCTCCATAACACACCATGAGGTATTCAAGCCCTTTTTCAGTAAGACTTaGCCTACCAAGGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GVGCPYPVSITHHEVFKPFFSKT*PTKVKA Trigger: GGCCTTCACCTTGGTAGGCAAAGTCTTACTGAAAAA...GGGCTTGAATACCTCATGGTGTGTTATGGAGACTGGGTAGGGACATCCCACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 90 bp | ACCTCTACATCCTCTTCACCTCCTCCAGCACTGGATGAGTCTGGATaGAGTGTGCTGGCATTAAGGGTAGAAGCTTTGTTGAACTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: TSTSSSPPPALDESG*SVLALRVEALLNSK Trigger: TTTGGAGTTCAACAAAGCTTCTACCCTTAATGCCAGCACACTGCATCCAGACTCATCCAGTGCTGGAGGAGGTGAAGAGGATGTAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS GCA 90 bp | TCCAAAGGACCACAGAATTTTGGCAACATCTTTACTTCGACAGTGTaGTACCCTCGGAGGCAAAGAGGCAGCTACTGCGTTCATTACTCT | + |
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Preference number: 5 (lower is better) Translates to: SKGPQNFGNIFTSTV*YPRRQRGSYCVHYS Trigger: AGAGTAATGAACGCAGTAGCTGCCTCTTTGCCTCCGAGGGTAGCACACTGTCGAAGTAAAGATGTTGCCAAAATTCTGTGGTCCTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | TCATCGTCAGCCTCAGTGTTACCTCTTGCCTTCGATCTGGTATCTTTAGGGACTTGCTCTGGGTACTGGTaGAATTCAGGCATCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSASVLPLAFDLVSLGTCSGYW*NSGIFL Trigger: CAGAAAGATGCCTGAATTCAACCAGTACCCAGAGCA...AGTCCCTAAAGATACCAGATCGAAGGCAAGAGGTAACACTGAGGCTGACGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | AAGCCCCTGTGGCTGAACACCACATGGTTCTGGTTTTTCAGTAAGACTTTGCCTTTAAGGGTAGAAGCTTaGTTGAACTCCAAACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPLWLNTTWFWFFSKTLPLRVEA*LNSKPR Trigger: CCTGGGTTTGGAGTTCAACAAAGCTTCTACCCTTAA...AGGCAAAGTCTTACTGAAAAACCAGAACCATGTGGTGTTCAGCCACAGGGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS GCA 90 bp | GCTCAGAGCAACATTTATGAACTCAACTGGAAAGTATTCAGAAAATaGCAAGCCAATCAGGCAGGTGAGAAGGTGCTCTGGGTACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQSNIYELNWKVFRK*QANQAGEKVLWVLV Trigger: AACCAGTACCCAGAGCACCTTCTCACCTGCCTGATTGGCTTGGCATTTTCTGAATACTTTCCAGTTGAGTTCATAAATGTTGCTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | TCATCGTCAGCCTCAGTGTTACCTCTTGCCTTCGATCTGGTATCTTTAGGGACTAAATGGGATCCTCACTaGCTAGATTCCACAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSASVLPLAFDLVSLGTKWDPH*LDSTDL Trigger: CAAATCTGTGGAATCTAGCAAGTGAGGATCCCATTT...AGTCCCTAAAGATACCAGATCGAAGGCAAGAGGTAACACTGAGGCTGACGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | TCCAAGCATCAGAAGCAGCCTGAGTTGGAAGGAATCCACATTAAATTATCTTCATGCAGATGTTTCTTGTaGAAGGTGAGAATTAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SKHQKQPELEGIHIKLSSCRCFL*KVRIKT Trigger: CGTCTTAATTCTCACCTTCAACAAGAAACATCTGCA...TGAAGATAATTTAATGTGGATTCCTTCCAACTCAGGCTGCTTCTGATGCTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS-3UTR CAA 90 bp | TATCCCCCAGTTGTGAGATCTATATTAACCCTACAGATTTCCACATTAAAGGGAAAAACCCCAAACAGATaGTACCAACTTCCTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YPPVVRSILTLQISTLKGKTPNR*YQLPLN Trigger: ATTTAGAGGAAGTTGGTACAATCTGTTTGGGGTTTT...TCCCTTTAATGTGGAAATCTGTAGGGTTAATATAGATCTCACAACTGGGGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS GCA 72 bp | CACTCCTTGGATGCTCGGAGCTGGAGGCTGGCCTCCTaGAAGCACTGCTCCCTCTTGTGCCCAGCTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HSLDARSWRLAS*KHCSLLCPAGA Trigger: AGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CAA 72 bp | GCACTGCTCCCTCTTGTGCCCAGCTGGAGCTGCCCTTaGGTGAGCCGGGCAGTGAAGGAAGGCATGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLPLVPSWSCP*VSRAVKEGMEP Trigger: TGGCTCCATGCCTTCCTTCACTGCCCGGCTCACCAAAGGGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CAA 90 bp | GGTGACTGGCTGCCGACAGGCTGTGCACATCATGGGCTGGGAACGTaGCTTCTCACTCAGGCAGGGTCGGCACAGAAGGTGACCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GDWLPTGCAHHGLGT*LLTQAGSAQKVTTG Trigger: CCCTGTGGTCACCTTCTGTGCCGACCCTGCCTGAGTGAGAAGCAACGTTCCCAGCCCATGATGTGCACAGCCTGTCGGCAGCCAGTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 72 bp | CTGCAAGCACTGCTCCCTCTTGTGCCCAGCTGGAGCTaGCCTTTGGTGAGCCGGGCAGTGAAGGAAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQALLPLVPSWS*PLVSRAVKEGM Trigger: CATGCCTTCCTTCACTGCCCGGCTCACCAAAGGGCAGCTCCAGCTGGGCACAAGAGGGAGCAGTGCTTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CCA 72 bp | GCCAGAAACACTCCTTGGATGCTCGGAGCTGGAGGCTaGCCTCCTGCAAGCACTGCTCCCTCTTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARNTPWMLGAGG*PPASTAPSCAQ Trigger: CTGGGCACAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTGTTTCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 72 bp | AAATGGACCCGCAGCACATCCTGGCTGGTGACTGGCTaGCGACAGGCTGTGCACATCATGGGCTGGGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: KWTRSTSWLVTG*RQAVHIMGWER Trigger: ACGTTCCCAGCCCATGATGTGCACAGCCTGTCGGCAGCCAGTCACCAGCCAGGATGTGCTGCGGGTCCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CCA 72 bp | ACTCTGGGCCAGAAACACTCCTTGGATGCTCGGAGCTaGAGGCTGGCCTCCTGCAAGCACTGCTCCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLGQKHSLDARS*RLASCKHCSLL Trigger: CAAGAGGGAGCAGTGCTTGCAGGAGGCCAGCCTCCAGCTCCGAGCATCCAAGGAGTGTTTCTGGCCCAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 72 bp | TGTGCTCTCCCAAGCAGGCGGCAGCCTGAAATAGAGTaGTGGAGTAGGAACCGGTCGATCCGGGCTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CALPSRRQPEIE*WSRNRSIRAFR Trigger: CCTGAAAGCCCGGATCGACCGGTTCCTACTCCAGCACTCTATTTCAGGCTGCCGCCTGCTTGGGAGAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS TCA 72 bp | CGTTGCTTCTCACTCAGGCAGGGTCGGCACAGAAGGTaGCCACAGGGCAGCTGGTACACAGGCTCATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RCFSLRQGRHRR*PQGSWYTGSFV Trigger: CACAAATGAGCCTGTGTACCAGCTGCCCTGTGGTCACCTTCTGTGCCGACCCTGCCTGAGTGAGAAGCAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CCA 72 bp | AGGGCAATTTCCAGACTTTGCGCCAGCTTCTGCTCATaGGACACTGGACCTGCTGAACAGTCCATGTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RAISRLCASFCS*DTGPAEQSMSV Trigger: GACGGACATGGACTGTTCAGCAGGTCCAGTGTCCCATGAGCAGAAGCTGGCGCAAAGTCTGGAAATTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS TCA 72 bp | GGCAGAGGAAGACGCACTCATGCCAAGGCTGTAGTGTaGGCTGTGTTCAGCCTGCTCTGTCTTCCTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRGRRTHAKAVV*AVFSLLCLPFP Trigger: AGGAAAAGGAAGACAGAGCAGGCTGAACACAGCTCACACTACAGCCTTGGCATGAGTGCGTCTTCCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CAA 72 bp | TGGCGTGATGTTTCCCATGTGCCAATGGGCCACGCTTaGGGCTGCACGGTAAGCAGGATTACAAGGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WRDVSHVPMGHA*GCTVSRITRCF Trigger: AAAGCACCTTGTAATCCTGCTTACCGTGCAGCCCAAAGCGTGGCCCATTGGCACATGGGAAACATCACGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS CAA 90 bp | GTCGGCACAGAAGGTGACCACAGGGCAGCTGGTACACAGGCTCATTaGTGGAGTAGGAAGAAAATGCTTGTTTGCAGGAGGCACACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGTEGDHRAAGTQAH*WSRKKMLVCRRHTL Trigger: CAGAGTGTGCCTCCTGCAAACAAGCATTTTCTTCCTACTCCACAAATGAGCCTGTGTACCAGCTGCCCTGTGGTCACCTTCTGTGCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS CAA 72 bp | TCTGGATGCAGTGTGCTGGCATTAAGGGTAGAAGCTTaGTTGAACTCCAAACCCAGGTGGGCACTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGCSVLALRVEA*LNSKPRWALLA Trigger: AGCCAGCAGTGCCCACCTGGGTTTGGAGTTCAACAAAGCTTCTACCCTTAATGCCAGCACACTGCATCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS CAA 90 bp | CAGTCCATGTCCGTCAGGCCAAGCTCACTGGTGGCTTTCATCTTCTaGGCAGTTGGCTCTGAGGTAGTAGGTGAGAATAAAGGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QSMSVRPSSLVAFIF*AVGSEVVGENKGLV Trigger: CACAAGCCCTTTATTCTCACCTACTACCTCAGAGCCAACTGCCAAGAAGATGAAAGCCACCAGTGAGCTTGGCCTGACGGACATGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028761.5 |
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| CDS GCA 72 bp | TCCTCTTCACCTCCTCCAGCACTGGATGAGTCTGGATaGAGTGTGCTGGCATTAAGGGTAGAAGCTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSPPPALDESG*SVLALRVEALL Trigger: CAACAAAGCTTCTACCCTTAATGCCAGCACACTGCATCCAGACTCATCCAGTGCTGGAGGAGGTGAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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| CDS GCA 72 bp | CCACAGAATTTTGGCAACATCTTTACTTCGACAGTGTaGTACCCTCGGAGGCAAAGAGGCAGCTACTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: PQNFGNIFTSTV*YPRRQRGSYCV Trigger: AACGCAGTAGCTGCCTCTTTGCCTCCGAGGGTAGCACACTGTCGAAGTAAAGATGTTGCCAAAATTCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140581.3 |
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