Pregenerated sensors for UBLCP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041231Ensembl transcript IDs: ENSMUST00000102795.4
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCATGACTAGTTTTAGGCAGAAGTGCTTCTACTCGGCCTTGTCCTaGTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCATGTAGGG | + |
|
Preference number: 1 (lower is better) Translates to: LMTSFRQKCFYSALS*CVISVCLSCPCHVG Trigger: CCCTACATGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAGAAGCACTTCTGCCTAAAACTAGTCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR CAA 90 bp | AAGTGCTTCTACTCGGCCTTGTCCTGCTGTGTTATTTCAGTCTGCTaGTCCTGTCCCTGTCATGTAGGGCACAGCCTTACCACGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: KCFYSALSCCVISVC*SCPCHVGHSLTTQM Trigger: CATCTGCGTGGTAAGGCTGTGCCCTACATGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAGAAGCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR GCA 90 bp | GACAAGGAAGGACAACTCTTGCGAGTTTTCAGCATAACAAACCAGGTCGTTACTAGGCAGGCTGGCATCTaGTTCAGTGTCCAGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: DKEGQLLRVFSITNQVVTRQAGI*FSVQHS Trigger: GCTGTGCTGGACACTGAAGCAGATGCCAGCCTGCCT...AGTAACGACCTGGTTTGTTATGCTGAAAACTCGCAAGAGTTGTCCTTCCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR CAA 90 bp | GCTGTGCTCATGACTAGTTTTAGGCAGAAGTGCTTCTACTCGGCCTaGTCCTGCTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AVLMTSFRQKCFYSA*SCCVISVCLSCPCH Trigger: ATGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAGAAGCACTTCTGCCTAAAACTAGTCATGAGCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR TCA 90 bp | CTACTCGGCCTTGTCCTGCTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCATCAGACTCAGGCAGATaGTTATACAAGGAGACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLGLVLLCYFSLLVLSLSSDSGR*LYKETK Trigger: TTTTGTCTCCTTGTATAATCATCTGCCTGAGTCTGA...TGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGCTGATTCTTAAGGAGCACTaGCACAACACAGCTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MLLRVELVMVPFYYCGKLILKEH*HNTASG Trigger: TCCTGAAGCTGTGTTGTGTCAGTGCTCCTTAAGAAT...CAGCTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGCTGTGTGTTATTTCAGTCTaGTTGTCCTGTCCCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MLLRVELVMVPFYYCGKLCVISV*LSCPCH Trigger: ATGACAGGGACAGGACAAGCAGACTGAAATAACACA...CAGCTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGGACAACTCTTGCGAGTTTTCAGCATAACAAACCAGGTCGTTACTTAGAATTGTTTACAAAGCATTaGAAGACCACAGCTAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GRTTLASFQHNKPGRYLELFTKH*KTTARQ Trigger: CTGCCTAGCTGTGGTCTTCCAATGCTTTGTAAACAA...TTCTAAGTAACGACCTGGTTTGTTATGCTGAAAACTCGCAAGAGTTGTCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR-3UTR CAA 90 bp | CTACTCGGCCTTGTCCTGCTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCAAGTTTGAAGACAGATTaGGTCTCAGACTCAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLGLVLLCYFSLLVLSLSSLKTD*VSDSGR Trigger: TCTGCCTGAGTCTGAGACCAAATCTGTCTTCAAACT...TGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR TCA 72 bp | ATGGTGCCTTTTTACTACTGTGGTAAGCTGTGCTCATaGCTAGTTTTAGGCAGAAGTGCTTCTACTCGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MVPFYYCGKLCS*LVLGRSASTRP Trigger: AGGCCGAGTAGAAGCACTTCTGCCTAAAACTAGTCATGAGCACAGCTTACCACAGTAGTAAAAAGGCACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR TCA 72 bp | AGTTTGAAGACAGATTTGGTCTCAGACTCAGGCAGATaGTTATACAAGGAGACAAAAGCAGAAAAGCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLKTDLVSDSGR*LYKETKAEKHK Trigger: CTTATGCTTTTCTGCTTTTGTCTCCTTGTATAATCATCTGCCTGAGTCTGAGACCAAATCTGTCTTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR TCA 90 bp | CTACTCGGCCTTGTCCTGCTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCAGGGGCGTGTGCACAGTaGTCATGGCCGCACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLVLLCYFSLLVLSLSGACAQ*SWPHCP Trigger: TGGACAGTGCGGCCATGATCACTGTGCACACGCCCC...TGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGGACAACTCTTGCGAGTTTTCAGCATAACAAACCAGGTCGTTACTTAGAAGCACCAGGAGCTTCTTaGCCTCCCGGGGAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTTLASFQHNKPGRYLEAPGAS*PPGEGS Trigger: TGAACCCTCCCCGGGAGGGCAAGAAGCTCCTGGTGC...TTCTAAGTAACGACCTGGTTTGTTATGCTGAAAACTCGCAAGAGTTGTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR GCA 90 bp | GACACAACACAGCTTCAGGATCTTCTGAGTAGACTGCAGGAGAGAAACTCTGACGTCACTGAGTACTCCTaGCCACCCCATTTCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: DTTQLQDLLSRLQERNSDVTEYS*PPHFTM Trigger: CATAGTGAAATGGGGTGGGCAGGAGTACTCAGTGAC...GTCAGAGTTTCTCTCCTGCAGTCTACTCAGAAGATCCTGAAGCTGTGTTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR TCA 90 bp | TCCATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGAAAACTTTCCCCAAATaGCACCAAGAGGCTTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SMLLRVELVMVPFYYCGKKTFPK*HQEASR Trigger: ACGTGAAGCCTCTTGGTGTCATTTGGGGAAAGTTTT...CTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGCTGTTAGATGAGCTTTCATaGAAGGCCTTATCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLLRVELVMVPFYYCGKLLDELS*KALSSV Trigger: GACTGAAGATAAGGCCTTTCATGAAAGCTCATCTAA...CAGCTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGGACAACTCTTGCGAGTTTTCAGCATAACAAACCAGGTCGTTACTTAGAATTATCACGGTTTAGATaGGCTTTCATGAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTTLASFQHNKPGRYLELSRFR*AFMKGL Trigger: AAGGCCTTTCATGAAAGCTCATCTAAACCGTGATAA...TTCTAAGTAACGACCTGGTTTGTTATGCTGAAAACTCGCAAGAGTTGTCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR GCA 90 bp | TCCATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGCCACTTCATATTTGTTaGAGACCAAATAACAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SMLLRVELVMVPFYYCGKPLHIC*RPNNNV Trigger: GACATTGTTATTTGGTCTGCAACAAATATGAAGTGG...CTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| 3UTR CAA 72 bp | GAAGAGAACTTTTTGTTTGTTTGTTTGTTTAGCACTTaGTTTACAAAGCATTGGAAGACCACAGCTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EENFLFVCLFST*FTKHWKTTARQ Trigger: CTGCCTAGCTGTGGTCTTCCAATGCTTTGTAAACAAAGTGCTAAACAAACAAACAAACAAAAAGTTCTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGAGCACCAGGAGCTTCTaGCCCTCCCGGGGAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMLLRVELVMVPFYYCGKSTRSF*PSRGGF Trigger: GAACCCTCCCCGGGAGGGCAAGAAGCTCCTGGTGCT...CTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR CAA 90 bp | TCAGTGTCCAGCACAGCCGTGGTAATGCCTAGCAAAGAAACAGAGGTCCACAGAACTGTCCTTGCTTCTTaGATAGATACCTCTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSTAVVMPSKETEVHRTVLAS*IDTSPS Trigger: ACTGGGAGAGGTATCTATCAAAGAAGCAAGGACAGT...TCTGTGGACCTCTGTTTCTTTGCTAGGCATTACCACGGCTGTGCTGGACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR CAA 90 bp | ATGCTTCTGAGAGTCGAGTTGGTGATGGTGCCTTTTTACTACTGTGGTAAGCTGACTCCCGTAAGGGTCTaGAGGAACTGTTTAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: MLLRVELVMVPFYYCGKLTPVRV*RNCLRS Trigger: GGATCTTAAACAGTTCCTCAAGACCCTTACGGGAGT...CAGCTTACCACAGTAGTAAAAAGGCACCATCACCAACTCGACTCTCAGAAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR CAA 90 bp | CTACTCGGCCTTGTCCTGCTGTGTTATTTCAGTCTGCTTGTCCTGTCCCTGTCAGTATTTGGTTTCAGTTaGAGAGCTCCAAGCTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLGLVLLCYFSLLVLSLSVFGFS*RAPSLT Trigger: TGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATAC...TGACAGGGACAGGACAAGCAGACTGAAATAACACAGCAGGACAAGGCCGAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS-3UTR CAA 90 bp | GACACAACACAGCTTCAGGATCTTCTGAGTAGACTGCAGGAGAGAAACTCTGACTCATTTTCTGCAGGTTaGCCTTTAACTTTGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTTQLQDLLSRLQERNSDSFSAG*PLTLSP Trigger: AGGGCTCAAAGTTAAAGGCAAACCTGCAGAAAATGA...GTCAGAGTTTCTCTCCTGCAGTCTACTCAGAAGATCCTGAAGCTGTGTTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS GCA 72 bp | AGAGGCTTCACGTCAATGAGCCCTCTCCGGGGCGTGTaGACAGTGATCATGGCCGCACTGTCCAGCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGFTSMSPLRGV*TVIMAALSSMK Trigger: CTTCATGCTGGACAGTGCGGCCATGATCACTGTGCACACGCCCCGGAGAGGGCTCATTGACGTGAAGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS CAA 72 bp | TCCCGGGGAGGGTTCAGCACCTCCACCTTGTACTCCTaGACTCTGCGAGAGACCTTCAGGAGGTTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGGFSTSTLYS*TLRETFRRFSS Trigger: GGAGGAAAACCTCCTGAAGGTCTCTCGCAGAGTCAAGGAGTACAAGGTGGAGGTGCTGAACCCTCCCCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS CAA 90 bp | AGCCCTAGTAACTTCTGGCGTTCTGGGAGCACTCCCGTAAGGGTCTaGAGGAACTGTTTAAGATCCAGCACAGTATCATCTTCTGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSNFWRSGSTPVRV*RNCLRSSTVSSSES Trigger: GCTCTCAGAAGATGATACTGTGCTGGATCTTAAACAGTTCCTCAAGACCCTTACGGGAGTGCTCCCAGAACGCCAGAAGTTACTAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS TCA 72 bp | AAGAAGTCATCAAGCTTAGCGATCTCCTTGAGGTACTaGGTGAGCTTCACCAGTTCCTTGTCTTTATCACGG | + |
|
Preference number: 6 (lower is better) Translates to: KKSSSLAISLRY*VSFTSSLSLSR Trigger: CCGTGATAAAGACAAGGAACTGGTGAAGCTCACTCAGTACCTCAAGGAGATCGCTAAGCTTGATGACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||
| CDS TCA 72 bp | GTTCCTTGTCTTTATCACGGTTTAGATGAGCTTTCATaGAAGGCCTTATCTTCAGTCCATTTTGTGGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPCLYHGLDELS*KALSSVHFVDS Trigger: TGAATCCACAAAATGGACTGAAGATAAGGCCTTTCATGAAAGCTCATCTAAACCGTGATAAAGACAAGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102795.4 |
||