Pregenerated sensors for UBL5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000113489Ensembl transcript IDs: ENSMUST00000220528.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS-3UTR GCA 90 bp | CCATCTATAGAAGTGTCAAATGAGGGTGGGATAGGAAGGCAGGGTAGAGTGGGGTCTTATTCCAGCGGGTaGCAGTTTGAGCCGCTATCA | + |
Preference number: 4 (lower is better) Translates to: PSIEVSNEGGIGRQGRVGSYSSG*QFEPLS Trigger: TGATAGCGGCTCAAACTGGCACCCGCTGGAATAAGA...CCCCACTCTACCCTGCCTTCCTATCCCACCCTCATTTGACACTTCTATAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220528.2 |
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CDS CCA 72 bp | CAGTTTGAGCCGCTATCAGTTTCTTCAAGTCACCAATaGTATCATCGGTGTTGCACTTCACTCGGACTTTCT | + |
Preference number: 6 (lower is better) Translates to: QFEPLSVSSSHQ*YHRCCTSLGLS Trigger: AGAAAGTCCGAGTGAAGTGCAACACCGATGATACCATTGGTGACTTGAAGAAACTGATAGCGGCTCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220528.2 |