Pregenerated sensors for UBL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000084786Ensembl transcript IDs: ENSMUST00000129414.9, ENSMUST00000160124.2, ENSMUST00000160682.8, ENSMUST00000160874.8, ENSMUST00000161486.8, ENSMUST00000162303.8
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAACAGACAGCCTTCCTTTCCATTTCCAAACTTGGGCCATACTATaGAGGGTAGATGAAATCCATGAGGCATCCACAGCTCCTGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VTDSLPFHFQTWAIL*RVDEIHEASTAPGN Trigger: ATTGCCAGGAGCTGTGGATGCCTCATGGATTTCATCTACCCTCCATAGTATGGCCCAAGTTTGGAAATGGAAAGGAAGGCTGTCTGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161486.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAGGTGTGCATCACCAACCAGGCCCAGCTTCCAGTCAATCTTCCCCTCAATACACCAGTGTCAGATaGGGATGGGAGAGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: MPGVHHQPGPASSQSSPQYTSVR*GWERRA Trigger: TGCCCTCCTCTCCCATCCTCATCTGACACTGGTGTA...TTGAGGGGAAGATTGACTGGAAGCTGGGCCTGGTTGGTGATGCACACCTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| 3UTR-3UTR GCA 90 bp | CATCACCAACCAGGCCCAGCTTCCAGTCAATCTTCCCCTCAAGTAGCAGTACCCACTAGACAGCAGCTCTaGCCTCACACACAACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HHQPGPASSQSSPQVAVPTRQQL*PHTQLS Trigger: TGAGAGTTGTGTGTGAGGGCAGAGCTGCTGTCTAGT...GGGTACTGCTACTTGAGGGGAAGATTGACTGGAAGCTGGGCCTGGTTGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATTTTCCAAGTGTTGAGATGCCAGGTGTGCATCACCAACCAGGCCCAGCTTACTAGACAGCAGCTCTaGCCTCACACACAACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: KIFQVLRCQVCITNQAQLTRQQL*PHTQLS Trigger: TGAGAGTTGTGTGTGAGGGCAGAGCTGCTGTCTAGT...AAGCTGGGCCTGGTTGGTGATGCACACCTGGCATCTCAACACTTGGAAAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAAGTATGACAGCAGCAAAGCAGCAGCCAAGTTTTTATTCATGTGAACTGTACACCAGTGTCAGATaGGGATGGGAGAGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HTSMTAAKQQPSFYSCELYTSVR*GWERRA Trigger: TGCCCTCCTCTCCCATCCTCATCTGACACTGGTGTA...CAGTTCACATGAATAAAAACTTGGCTGCTGCTTTGCTGCTGTCATACTTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| 3UTR TCA 72 bp | GCAGCTCTGCCCTCACACACAACTCTCACACAAGTATaGCAGCAGCAAAGCAGCAGCCAAGTTTTTATTCAT | + |
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Preference number: 3 (lower is better) Translates to: AALPSHTTLTQV*QQQSSSQVFIH Trigger: ATGAATAAAAACTTGGCTGCTGCTTTGCTGCTGTCATACTTGTGTGAGAGTTGTGTGTGAGGGCAGAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| 3UTR CCA 72 bp | AGCCTTCCTTTCCATTTCCAAACTTGGGCCATACTATaGAGGGTAGATGAAATCCATGAGGCATCCACAGCT | + |
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Preference number: 3 (lower is better) Translates to: SLPFHFQTWAIL*RVDEIHEASTA Trigger: AGCTGTGGATGCCTCATGGATTTCATCTACCCTCCATAGTATGGCCCAAGTTTGGAAATGGAAAGGAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161486.8 |
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| 3UTR CCA 72 bp | CACGTAACAGACAGCCTTCCTTTCCATTTCCAAACTTaGGCCATACTATGGAGGGTAGATGAAATCCATGAG | + |
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Preference number: 3 (lower is better) Translates to: HVTDSLPFHFQT*AILWRVDEIHE Trigger: CTCATGGATTTCATCTACCCTCCATAGTATGGCCCAAGTTTGGAAATGGAAAGGAAGGCTGTCTGTTACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161486.8 |
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| 3UTR TCA 72 bp | GACAGCAGCAAAGCAGCAGCCAAGTTTTTATTCATGTaGACTGTTAAAAATGACCATCTACACCAGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: DSSKAAAKFLFM*TVKNDHLHQCQ Trigger: CTGACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTGCTGCTTTGCTGCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGTTGAGATGCCAGGTGTGCATCACCAACCAGGCCCAGCTTCCAGTCAATATGGTGTCATCGGTGTaGCACTTAACGCGGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: QVLRCQVCITNQAQLPVNMVSSV*HLTRTF Trigger: GAAAGTCCGCGTTAAGTGCAACACCGATGACACCAT...ATTGACTGGAAGCTGGGCCTGGTTGGTGATGCACACCTGGCATCTCAACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTGCCCTCACACACAACTCTCACACAAGTATGACAGCAGCAAAGCAGCAGCCAGCGGGTGCCAGTTaGAGCAGCTATCAGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSALTHNSHTSMTAAKQQPAGAS*SSYQFL Trigger: AAGAAACTGATAGCTGCTCAAACTGGCACCCGCTGG...CTGCTGCTTTGCTGCTGTCATACTTGTGTGAGAGTTGTGTGTGAGGGCAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | ATGCCAGGTGTGCATCACCAACCAGGCCCAGCTTCCAGTCAATCTTCCCCTCAATTTTTAAGAACGATCTaGTTCCAGCGGGTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: MPGVHHQPGPASSQSSPQFLRTI*FQRVPV Trigger: AACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAA...TTGAGGGGAAGATTGACTGGAAGCTGGGCCTGGTTGGTGATGCACACCTGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | TTCAATCTCAGCACTTGTAGTGGAGGCAGGAGTCACGGTCATTGTGGTACACAGATGGTGTCATCGGTGTaGCACTTAACGCGGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: FNLSTCSGGRSHGHCGTQMVSSV*HLTRTF Trigger: GAAAGTCCGCGTTAAGTGCAACACCGATGACACCAT...CTGTGTACCACAATGACCGTGACTCCTGCCTCCACTACAAGTGCTGAGATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGTTGAGATGCCAGGTGTGCATCACCAACCAGGCCCAGCTTCCAGTCAATTTTTTAAGAACGATCTaGTTCCAGCGGGTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: QVLRCQVCITNQAQLPVNFLRTI*FQRVPV Trigger: AACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAA...ATTGACTGGAAGCTGGGCCTGGTTGGTGATGCACACCTGGCATCTCAACACTTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000129414.9 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGTTTTTATTCATGTGAACTGTTAAAAATGACCATCTACACCAGTGTCATGGTGTCATCGGTGTaGCACTTAACGCGGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: QPSFYSCELLKMTIYTSVMVSSV*HLTRTF Trigger: GAAAGTCCGCGTTAAGTGCAACACCGATGACACCAT...GACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000129414.9 ENSMUST00000160124.2 ENSMUST00000160682.8 ENSMUST00000160874.8 ENSMUST00000161486.8 ENSMUST00000162303.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCAAGTTTTTATTCATGTGAACTGTTAAAAATGACCATCTACACCAGTATGGTGTCATCGGTGTaGCACTTAACGCGGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: QQPSFYSCELLKMTIYTSMVSSV*HLTRTF Trigger: GAAAGTCCGCGTTAAGTGCAACACCGATGACACCAT...ACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000129414.9 ENSMUST00000160682.8 ENSMUST00000161486.8 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGTTTTTATTCATGTGAACTGTTAAAAATGACCATCTACACCAGTGTCTTTTTAAGAACGATCTaGTTCCAGCGGGTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: QPSFYSCELLKMTIYTSVFLRTI*FQRVPV Trigger: AACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAA...GACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000129414.9 ENSMUST00000160124.2 ENSMUST00000160682.8 ENSMUST00000160874.8 ENSMUST00000161486.8 ENSMUST00000162303.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTTTTTATTCATGTGAACTGTTAAAAATGACCATCTACACCAGTGTCAGATTTTTAAGAACGATCTaGTTCCAGCGGGTGCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PSFYSCELLKMTIYTSVRFLRTI*FQRVPV Trigger: AACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAA...TCTGACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000129414.9 ENSMUST00000160124.2 ENSMUST00000160682.8 ENSMUST00000160874.8 ENSMUST00000161486.8 ENSMUST00000162303.8 |
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