Pregenerated sensors for UBL4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015290Ensembl transcript IDs: ENSMUST00000015434.15, ENSMUST00000155676.8, ENSMUST00000178691.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGTAGTTGTTCCAGGACCCTGCTGGCATCTGCTACACTGAAGTaGCGGGCCAGGACTTTGGAGATCAGCTGCCAGATGGGGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LCSCSRTLLASATLK*RARTLEISCQMGVA Trigger: AGCCACCCCCATCTGGCAGCTGATCTCCAAAGTCCTGGCCCGTCACTTCAGTGTAGCAGATGCCAGCAGGGTCCTGGAACAACTACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 90 bp | GAGATCAGCTGCCAGATGGGGGTGGCTGGGGAGTCGACCAGTCTGTaGGCAGACCCTTCTTCCAGTAGCACCTTCTCCAAAGGCTTAACA | + |
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Preference number: 1 (lower is better) Translates to: EISCQMGVAGESTSL*ADPSSSSTFSKGLT Trigger: TGTTAAGCCTTTGGAGAAGGTGCTACTGGAAGAAGGGTCTGCCCACAGACTGGTCGACTCCCCAGCCACCCCCATCTGGCAGCTGATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 90 bp | AGCACACTGGCTGCAGCAGTGGAGGGGCCCTGGATAGCTAACACTTaGCCTCCTATAGAGATTTGCCAAGGGACACACCAGAGGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: STLAAAVEGPWIANT*PPIEICQGTHQRAG Trigger: ACCTGCCCTCTGGTGTGTCCCTTGGCAAATCTCTATAGGAGGCCAAGTGTTAGCTATCCAGGGCCCCTCCACTGCTGCAGCCAGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR TCA 90 bp | AATCCCTCTGTAGTTGTTCCAGGACCCTGCTGGCATCTGCTACACTaGAGTGACGGGCCAGGACTTTGGAGATCAGCTGCCAGATGGGGG | + |
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Preference number: 1 (lower is better) Translates to: NPSVVVPGPCWHLLH*SDGPGLWRSAARWG Trigger: CCCCCATCTGGCAGCTGATCTCCAAAGTCCTGGCCCGTCACTTCAGTGTAGCAGATGCCAGCAGGGTCCTGGAACAACTACAGAGGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 90 bp | TGCTTGTTATTCAAGAGCACACTGGCTGCAGCAGTGGAGGGGCCCTaGATAGCTAACACTTGGCCTCCTATAGAGATTTGCCAAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: CLLFKSTLAAAVEGP*IANTWPPIEICQGT Trigger: TGTCCCTTGGCAAATCTCTATAGGAGGCCAAGTGTTAGCTATCCAGGGCCCCTCCACTGCTGCAGCCAGTGTGCTCTTGAATAACAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 90 bp | ATGCAGCTGTGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATaGTATTTGCAGAACCCTTTTTCCATAGCCTCAGTCACTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: MQLWPDLGFLPTIPE*YLQNPFSIASVTSG Trigger: CCCTGAAGTGACTGAGGCTATGGAAAAAGGGTTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR GCA 90 bp | TGTCCCAAGCCATTGCTAGGTGTCTCTACAGTGCAGCCTCAACTTTaGTGTGGGAGGCAGAAGAGAACTCAGGCCATGTACTTTGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: CPKPLLGVSTVQPQL*CGRQKRTQAMYFEY Trigger: GTACTCAAAGTACATGGCCTGAGTTCTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCACTGTAGAGACACCTAGCAATGGCTTGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 90 bp | CCTGATATGATACCCCAGGTCTTAGGAGTACCAGGGTCTATCACCTaGACACCCCCTCAGGCCTCTATCATTTCTGTACAAGGACTCAAG | + |
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Preference number: 1 (lower is better) Translates to: PDMIPQVLGVPGSIT*TPPQASIISVQGLK Trigger: CTTGAGTCCTTGTACAGAAATGATAGAGGCCTGAGGGGGTGTGCAGGTGATAGACCCTGGTACTCCTAAGACCTGGGGTATCATATCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 90 bp | TACAGGTGGCAGAGGAAGCATCCATTTCATACTGTGGGTGAGCACTaGATAAGGAGACCAAGGCAGAGTGTTCTAGTTGTGACACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: YRWQRKHPFHTVGEH*IRRPRQSVLVVTLP Trigger: AGGCAGTGTCACAACTAGAACACTCTGCCTTGGTCTCCTTATCCAGTGCTCACCCACAGTATGAAATGGATGCTTCCTCTGCCACCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 90 bp | GCTATGCTACAAAGGCCCAGGATACTCCATCTAGTGGCCCATGCTTaGCTATCACTTCACTTTTGCTTTCTGAACACAAGGTGGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: AMLQRPRILHLVAHA*LSLHFCFLNTRWNC Trigger: GCAGTTCCACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTGTAGCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 90 bp | CGACATGAGAACACATTTAATGCAACATGCAGCTGTGGCCTGACCTaGGATTTCTCCCCACAATCCCAGAATGCTATTTGCAGAACCCTT | + |
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Preference number: 1 (lower is better) Translates to: RHENTFNATCSCGLT*DFSPQSQNAICRTL Trigger: AAGGGTTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGTGTTCTCATGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR TCA 90 bp | AACTGCGACATGAGAACACATTTAATGCAACATGCAGCTGTGGCCTaGCCTGGGATTTCTCCCCACAATCCCAGAATGCTATTTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: NCDMRTHLMQHAAVA*PGISPHNPRMLFAE Trigger: TTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGTGTTCTCATGTCGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR GCA 90 bp | AAGAGCTATGCTACAAAGGCCCAGGATACTCCATCTAGTGGCCCATaGTTGGCTATCACTTCACTTTTGCTTTCTGAACACAAGGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: KSYATKAQDTPSSGP*LAITSLLLSEHKVE Trigger: TTCCACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTGTAGCATAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 90 bp | ATTCAGGTCAGAGGAGTGCCTAACATGGGACAGATTCACTTTGGTTaGGGACCAAAGTGGCATAGAAACATGACTCAAACTATGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: IQVRGVPNMGQIHFG*GPKWHRNMTQTMME Trigger: CTCCATCATAGTTTGAGTCATGTTTCTATGCCACTTTGGTCCCCAACCAAAGTGAATCTGTCCCATGTTAGGCACTCCTCTGACCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR TCA 90 bp | GAGACAGAAGCTATGCTACAGAAAGAAAGTGCTCCTCATTGGCAGTaGATGAAAGGTTTTGATGGAGCTGTAGACAGCTTTGATCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ETEAMLQKESAPHWQ*MKGFDGAVDSFDPW Trigger: CCAAGGATCAAAGCTGTCTACAGCTCCATCAAAACCTTTCATTCACTGCCAATGAGGAGCACTTTCTTTCTGTAGCATAGCTTCTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 90 bp | ATAAAGGAGAAAGGAAACTTATTCAGGTCAGAGGAGTGCCTAACATaGGACAGATTCACTTTGGTTGGGGACCAAAGTGGCATAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: IKEKGNLFRSEECLT*DRFTLVGDQSGIET Trigger: TGTTTCTATGCCACTTTGGTCCCCAACCAAAGTGAATCTGTCCCATGTTAGGCACTCCTCTGACCTGAATAAGTTTCCTTTCTCCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR TCA 90 bp | TGCATCTTTAGTGTTAATTTTACAAATACGTTCCCTGACTCAAAGTaGACAAGGTCACTGGTAAGCTTATTATCTGAGCTGGCACTCTAT | + |
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Preference number: 1 (lower is better) Translates to: CIFSVNFTNTFPDSK*TRSLVSLLSELALY Trigger: ATAGAGTGCCAGCTCAGATAATAAGCTTACCAGTGACCTTGTTCACTTTGAGTCAGGGAACGTATTTGTAAAATTAACACTAAAGATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR TCA 90 bp | CGACAAGGTCTATGCAGGAGGCCCTTGGGCAAGAAAGGCAAGTGTAGCCCCAATCATGCAGCTGTGGCCTaGCCTGGGATTTCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RQGLCRRPLGKKGKCSPNHAAVA*PGISPH Trigger: GTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATG...ATTGGGGCTACACTTGCCTTTCTTGCCCAAGGGCCTCCTGCATAGACCTTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAGAAAGCGGCTGGCCAAACGTTCGATGTCATCCAGTGTTAGGCGGCTCAAGACTTTGGAGATCAGCTaGCAGATGGGGGTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CRKRLAKRSMSSSVRRLKTLEIS*QMGVAG Trigger: CCCAGCCACCCCCATCTGGCAGCTGATCTCCAAAGT...CTTGAGCCGCCTAACACTGGATGACATCGAACGTTTGGCCAGCCGCTTTCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCGGCTGGCCAAACGTTCGATGTCATCCAGTGTTAGGCGGCTCAAGGACGAGTCGACCAGTCTGTaGGCAGACCCTTCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RKRLAKRSMSSSVRRLKDESTSL*ADPSSS Trigger: ACTGGAAGAAGGGTCTGCCCACAGACTGGTCGACTC...GTCCTTGAGCCGCCTAACACTGGATGACATCGAACGTTTGGCCAGCCGCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATGCTATTTGCAGAACCGACCCTGCTGGCATCTaGTACACTGAAGTGACGGGC | + |
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Preference number: 2 (lower is better) Translates to: CGLTWDFSPQSQNAICRTDPAGI*YTEVTG Trigger: GCCCGTCACTTCAGTGTAGCAGATGCCAGCAGGGTC...GGTTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CAA 90 bp | ACTTCTATAGGCTGGCTAGACTTGGACCCTGTCTGTCCCAAGCCATaGCTAGGTGTCTCTACAGTGCAGCCTCAACTTTGCTGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TSIGWLDLDPVCPKP*LGVSTVQPQLCCGR Trigger: CCTCCCACAGCAAAGTTGAGGCTGCACTGTAGAGACACCTAGCAATGGCTTGGGACAGACAGGGTCCAAGTCTAGCCAGCCTATAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACATGCAGCTGTGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATGCTGGTGTAGAAAGCGGCTaGCCAAACGTTCGATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ATCSCGLTWDFSPQSQNAGVESG*PNVRCH Trigger: ATGACATCGAACGTTTGGCCAGCCGCTTTCTACACC...AGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGAAAGAGCCAAGCAAATAGGGTGCTCCAGAGAAGAGCTATGCTACAAAGCTGGGGTATCTTTCTaGTCCTCCAGCCCCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: LPERAKQIGCSREELCYKAGVSF*SSSPLT Trigger: GGTTAAGGGGCTGGAGGATCAGAAAGATACCCCAGC...TTTGTAGCATAGCTCTTCTCTGGAGCACCCTATTTGCTTGGCTCTTTCTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCAGCTGTGGCCTGACCTaGGATTTCTCCCCACAATCC | + |
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Preference number: 2 (lower is better) Translates to: WARKASVAPITFIVEWLSSCGLT*DFSPQS Trigger: GGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCT...GGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAGAAAGAGCCAAGCAAATAGGGTGCTCCAGAGAAGAGCTATGCTACAAAGTGCAGCCTCAACTTTaGTGTGGGAGGCAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPERAKQIGCSREELCYKVQPQL*CGRQKR Trigger: TCTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCAC...TTTGTAGCATAGCTCTTCTCTGGAGCACCCTATTTGCTTGGCTCTTTCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CAA 90 bp | AGCTATGCTACAAAGGCCCAGGATACTCCATCTAGTGGCCCATGCTaGGCTATCACTTCACTTTTGCTTTCTGAACACAAGGTGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: SYATKAQDTPSSGPC*AITSLLLSEHKVEL Trigger: CAGTTCCACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTGTAGCATAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAAAGCCCCTGTATACAGGTGGCAGAGGAAGCATCCATTTCATACTGTGGGTACATTTAATGCAACATaGAGCTGTGGCCTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: VKAPVYRWQRKHPFHTVGTFNAT*SCGLTW Trigger: CCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGT...ACCCACAGTATGAAATGGATGCTTCCTCTGCCACCTGTATACAGGGGCTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CAA 90 bp | TACAAGGACTCAAGATTTGACCGACAAGGTCTATGCAGGAGGCCCTaGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: YKDSRFDRQGLCRRP*GKKGKCSPNNIHSR Trigger: TCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCAAGGGCCTCCTGCATAGACCTTGTCGGTCAAATCTTGAGTCCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGAAAGAGCCAAGCAAATAGGGTGCTCCAGAGAAGAGCTATGCTACAAACAGATTCACTTTGGTTaGGGACCAAAGTGGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: LPERAKQIGCSREELCYKQIHFG*GPKWHR Trigger: TCTATGCCACTTTGGTCCCCAACCAAAGTGAATCTG...TTTGTAGCATAGCTCTTCTCTGGAGCACCCTATTTGCTTGGCTCTTTCTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCAAAGACTCCCACCTTaGACTGATAAAGGAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGKKGKCSPNNIHSRVAFQRLPP*TDKGER Trigger: CCTTTCTCCTTTATCAGTTCAAGGTGGGAGTCTTTG...GAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCGCACCTAGCAAGAGCTaGATACATACCAGCTATTAT | + |
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Preference number: 2 (lower is better) Translates to: WARKASVAPITFIVEWLSAPSKS*IHTSYY Trigger: ATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGC...GGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTACCTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATTATCACTATACATTTAATGCAACATaGAGCTGTGGCCTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: EYLAPSKSWIHTSYYYHYTFNAT*SCGLTW Trigger: CCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGT...ATAGTGATAATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
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| 3UTR CCA 72 bp | GGGCCAGGACTTTGGAGATCAGCTGCCAGATGGGGGTaGCTGGGGAGTCGACCAGTCTGTGGGCAGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: GPGLWRSAARWG*LGSRPVCGQTL Trigger: AAGGGTCTGCCCACAGACTGGTCGACTCCCCAGCCACCCCCATCTGGCAGCTGATCTCCAAAGTCCTGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 72 bp | AGTGACGGGCCAGGACTTTGGAGATCAGCTGCCAGATaGGGGTGGCTGGGGAGTCGACCAGTCTGTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SDGPGLWRSAAR*GWLGSRPVCGQ Trigger: CTGCCCACAGACTGGTCGACTCCCCAGCCACCCCCATCTGGCAGCTGATCTCCAAAGTCCTGGCCCGTCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 72 bp | TGCCAGATGGGGGTGGCTGGGGAGTCGACCAGTCTGTaGGCAGACCCTTCTTCCAGTAGCACCTTCTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: CQMGVAGESTSL*ADPSSSSTFSK Trigger: TTTGGAGAAGGTGCTACTGGAAGAAGGGTCTGCCCACAGACTGGTCGACTCCCCAGCCACCCCCATCTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR TCA 72 bp | TGTTCCAGGACCCTGCTGGCATCTGCTACACTGAAGTaGCGGGCCAGGACTTTGGAGATCAGCTGCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: CSRTLLASATLK*RARTLEISCQM Trigger: CATCTGGCAGCTGATCTCCAAAGTCCTGGCCCGTCACTTCAGTGTAGCAGATGCCAGCAGGGTCCTGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR CCA 72 bp | GCTGCAGCAGTGGAGGGGCCCTGGATAGCTAACACTTaGCCTCCTATAGAGATTTGCCAAGGGACACACCAG | + |
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Preference number: 3 (lower is better) Translates to: AAAVEGPWIANT*PPIEICQGTHQ Trigger: CTGGTGTGTCCCTTGGCAAATCTCTATAGGAGGCCAAGTGTTAGCTATCCAGGGCCCCTCCACTGCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 72 bp | CCCTGGATAGCTAACACTTGGCCTCCTATAGAGATTTaGCAAGGGACACACCAGAGGGCAGGTGACAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PWIANTWPPIEI*QGTHQRAGDRN Trigger: GTTCCTGTCACCTGCCCTCTGGTGTGTCCCTTGGCAAATCTCTATAGGAGGCCAAGTGTTAGCTATCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 72 bp | CCATTGCTAGGTGTCTCTACAGTGCAGCCTCAACTTTaGTGTGGGAGGCAGAAGAGAACTCAGGCCATGTAC | + |
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Preference number: 3 (lower is better) Translates to: PLLGVSTVQPQL*CGRQKRTQAMY Trigger: GTACATGGCCTGAGTTCTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCACTGTAGAGACACCTAGCAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR CCA 72 bp | GCACACTCTTTCTCCTACAGAGGCACTTCTATAGGCTaGCTAGACTTGGACCCTGTCTGTCCCAAGCCATTG | + |
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Preference number: 3 (lower is better) Translates to: AHSFSYRGTSIG*LDLDPVCPKPL Trigger: CAATGGCTTGGGACAGACAGGGTCCAAGTCTAGCCAGCCTATAGAAGTGCCTCTGTAGGAGAAAGAGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR TCA 72 bp | CACTGCCTTTCTGAGTCACCTGTTGTCCCTCATGGGTaGGACCTACTTCCAGAAAGAGCCAAGCAAATAGGG | + |
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Preference number: 3 (lower is better) Translates to: HCLSESPVVPHG*DLLPERAKQIG Trigger: CCCTATTTGCTTGGCTCTTTCTGGAAGTAGGTCTCACCCATGAGGGACAACAGGTGACTCAGAAAGGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR TCA 72 bp | CAGGTGGCAGAGGAAGCATCCATTTCATACTGTGGGTaGGCACTGGATAAGGAGACCAAGGCAGAGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QVAEEASISYCG*ALDKETKAECS Trigger: AGAACACTCTGCCTTGGTCTCCTTATCCAGTGCTCACCCACAGTATGAAATGGATGCTTCCTCTGCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 72 bp | ATACCCCAGGTCTTAGGAGTACCAGGGTCTATCACCTaGACACCCCCTCAGGCCTCTATCATTTCTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: IPQVLGVPGSIT*TPPQASIISVQ Trigger: TTGTACAGAAATGATAGAGGCCTGAGGGGGTGTGCAGGTGATAGACCCTGGTACTCCTAAGACCTGGGGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCATAGGCTGGCTAGACTaGGACCCTGTCTGTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: WARKASVAPITFIVEWLSIGWLD*DPVCPK Trigger: CTTGGGACAGACAGGGTCCAAGTCTAGCCAGCCTAT...GGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 72 bp | TGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATaGTATTTGCAGAACCCTTTTTCCATAGCCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: WPDLGFLPTIPE*YLQNPFSIASV Trigger: GACTGAGGCTATGGAAAAAGGGTTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCAGTGCAGCCTCAACTTaGCTGTGGGAGGCAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LGKKGKCSPNNIHSRVAFSAAST*LWEAEE Trigger: CTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCACT...GAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
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| 3UTR GCA 72 bp | GCTACAAAGGCCCAGGATACTCCATCTAGTGGCCCATaGTTGGCTATCACTTCACTTTTGCTTTCTGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: ATKAQDTPSSGP*LAITSLLLSEH Trigger: GTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CCA 72 bp | CAAAGGCCCAGGATACTCCATCTAGTGGCCCATGCTTaGCTATCACTTCACTTTTGCTTTCTGAACACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRPRILHLVAHA*LSLHFCFLNTR Trigger: CCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CCA 72 bp | CAGAGGAAGCATCCATTTCATACTGTGGGTGAGCACTaGATAAGGAGACCAAGGCAGAGTGTTCTAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QRKHPFHTVGEH*IRRPRQSVLVV Trigger: CACAACTAGAACACTCTGCCTTGGTCTCCTTATCCAGTGCTCACCCACAGTATGAAATGGATGCTTCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTGGATAAGGAGACCAAGGCAGAGTGTTCTAGTTGTGACACTGCCTTTCTGGCTATCACTTCACTTTaGCTTTCTGAACACAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALDKETKAECSSCDTAFLAITSL*LSEHKV Trigger: CACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGC...CAGAAAGGCAGTGTCACAACTAGAACACTCTGCCTTGGTCTCCTTATCCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR TCA 72 bp | ATGAGAACACATTTAATGCAACATGCAGCTGTGGCCTaGCCTGGGATTTCTCCCCACAATCCCAGAATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: MRTHLMQHAAVA*PGISPHNPRML Trigger: TAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGTGTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| 3UTR TCA 72 bp | TGGCCCATGCTTGGCTATCACTTCACTTTTGCTTTCTaGACACAAGGTGGAACTGCAGGTGATGAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPMLGYHFTFAF*TQGGTAGDESK Trigger: TTTGCTCTCATCACCTGCAGTTCCACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CCA 72 bp | AACACATTTAATGCAACATGCAGCTGTGGCCTGACCTaGGATTTCTCCCCACAATCCCAGAATGCTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NTFNATCSCGLT*DFSPQSQNAIC Trigger: GCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCATGTTGCATTAAATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| 3UTR TCA 72 bp | CTGAGTGGGCTAAATGGGAATACTAAGACCCATCTCTaGAAACAGCACACTCTTTCTCCTACAGAGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSGLNGNTKTHL*KQHTLSPTEAL Trigger: AAGTGCCTCTGTAGGAGAAAGAGTGTGCTGTTTTCAGAGATGGGTCTTAGTATTCCCATTTAGCCCACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR TCA 72 bp | CATGACTCAAACTATGATGGAGCTGGGGTATCTTTCTaGTCCTCCAGCCCCTTAACCTGCTTGTTATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HDSNYDGAGVSF*SSSPLTCLLFK Trigger: CTTGAATAACAAGCAGGTTAAGGGGCTGGAGGATCAGAAAGATACCCCAGCTCCATCATAGTTTGAGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CCA 72 bp | AGAGGAGTGCCTAACATGGGACAGATTCACTTTGGTTaGGGACCAAAGTGGCATAGAAACATGACTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RGVPNMGQIHFG*GPKWHRNMTQT Trigger: AGTTTGAGTCATGTTTCTATGCCACTTTGGTCCCCAACCAAAGTGAATCTGTCCCATGTTAGGCACTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR GCA 72 bp | AGCATTTATTTGCTGGGGCATCTGAGACAGAAGCTATaGTACAGAAAGAAAGTGCTCCTCATTGGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIYLLGHLRQKL*YRKKVLLIGSE Trigger: TTCACTGCCAATGAGGAGCACTTTCTTTCTGTAGCATAGCTTCTGTCTCAGATGCCCCAGCAAATAAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR TCA 72 bp | GCTATGCTACAGAAAGAAAGTGCTCCTCATTGGCAGTaGATGAAAGGTTTTGATGGAGCTGTAGACAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AMLQKESAPHWQ*MKGFDGAVDSF Trigger: AAAGCTGTCTACAGCTCCATCAAAACCTTTCATTCACTGCCAATGAGGAGCACTTTCTTTCTGTAGCATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CCA 72 bp | GCCATGTACTTTGAGTACCTAGCACCTAGCAAGAGCTaGATACATACCAGCTATTATTATCACTATGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AMYFEYLAPSKS*IHTSYYYHYEP Trigger: TGGCTCATAGTGATAATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTCAAAGTACATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
||
| 3UTR TCA 72 bp | CAAGAGCTGGATACATACCAGCTATTATTATCACTATaGGCCAAACTGCGACATGAGAACACATTTAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: QELDTYQLLLSL*AKLRHENTFNA Trigger: TGCATTAAATGTGTTCTCATGTCGCAGTTTGGCTCATAGTGATAATAATAGCTGGTATGTATCCAGCTCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
||
| 3UTR GCA 72 bp | ATACATACCAGCTATTATTATCACTATGAGCCAAACTaGGACATGAGAACACATTTAATGCAACATGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IHTSYYYHYEPN*DMRTHLMQHAA Trigger: AGCTGCATGTTGCATTAAATGTGTTCTCATGTCGCAGTTTGGCTCATAGTGATAATAATAGCTGGTATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGAGTCGACCAGTCTGTGGGCAGACCCTTCTTCCAGTAGCACCTTCTCCCTAGGGCCTTGCCCTTaGACAGCAGACGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGESTSLWADPSSSSTFSLGPCP*TADVAG Trigger: GCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAG...GGAGAAGGTGCTACTGGAAGAAGGGTCTGCCCACAGACTGGTCGACTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR CCA 90 bp | TGTAGAAAGCGGCTGGCCAAACGTTCGATGTCATCCAGTGTTAGGCGGCTCAAGTCACTGATGTGGAGGTaGCTGGGAAGCAATCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRKRLAKRSMSSSVRRLKSLMWR*LGSNPA Trigger: GGCAGGATTGCTTCCCAGCCACCTCCACATCAGTGA...CTTGAGCCGCCTAACACTGGATGACATCGAACGTTTGGCCAGCCGCTTTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATGCTATTTGCAGAACCTGGTTCCTTCCTCACTaGTGTGGAGGTGGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CGLTWDFSPQSQNAICRTWFLPH*CGGGWE Trigger: TTCCCAGCCACCTCCACATCAGTGAGGAAGGAACCA...GGTTCTGCAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR GCA 90 bp | GCACTGGATAAGGAGACCAAGGCAGAGTGTTCTAGTTGTGACACTGCCTTTCTGGACCCTGCTGGCATCTaGTACACTGAAGTGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALDKETKAECSSCDTAFLDPAGI*YTEVTG Trigger: GCCCGTCACTTCAGTGTAGCAGATGCCAGCAGGGTC...CAGAAAGGCAGTGTCACAACTAGAACACTCTGCCTTGGTCTCCTTATCCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CAA 72 bp | GCCATTGCTAGGTGTCTCTACAGTGCAGCCTCAACTTaGCTGTGGGAGGCAGAAGAGAACTCAGGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIARCLYSAAST*LWEAEENSGHV Trigger: TACATGGCCTGAGTTCTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCACTGTAGAGACACCTAGCAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CAA 72 bp | TTCTCCTACAGAGGCACTTCTATAGGCTGGCTAGACTaGGACCCTGTCTGTCCCAAGCCATTGCTAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYRGTSIGWLD*DPVCPKPLLGV Trigger: GACACCTAGCAATGGCTTGGGACAGACAGGGTCCAAGTCTAGCCAGCCTATAGAAGTGCCTCTGTAGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCTGTGGCCTGACCTGGGATTTCTCCCCACAATCCCAGAATGCTATTTGTTGAACAGCAGACGTTaGTGGCGCACAGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: MQLWPDLGFLPTIPECYLLNSRR*WRTGTF Trigger: GAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAA...CAAATAGCATTCTGGGATTGTGGGGAGAAATCCCAGGTCAGGCCACAGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTACACTGAAGTGACGGGCCAGGACTTTGGAGATCAGCTGCCAGATGGGCTGCCAAAGAGAGATTaGTGTGGTTCCTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTEVTGQDFGDQLPDGLPKRD*CGSFLT Trigger: AGTGAGGAAGGAACCACACCAATCTCTCTTTGGCAG...CCCATCTGGCAGCTGATCTCCAAAGTCCTGGCCCGTCACTTCAGTGTAGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGCATCTGCTACACTGAAGTGACGGGCCAGGACTTTGGAGATCAGCTGCCCAATGTTGTAATCTaGCAGTCGTTTTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAGICYTEVTGQDFGDQLPNVVI*QSFFIC Trigger: GCAGATGAAAAACGACTGTCAGATTACAACATTGGG...CAGCTGATCTCCAAAGTCCTGGCCCGTCACTTCAGTGTAGCAGATGCCAGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCTGGCAAAGATCAGCTGCCAGATaGGGGTGGCTGGGGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RKASVAPITFIVEWLSWQRSAAR*GWLGSR Trigger: TCGACTCCCCAGCCACCCCCATCTGGCAGCTGATCT...TTGCCAGGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR TCA 90 bp | TGCTATTTGCAGAACCCTTTTTCCATAGCCTCAGTCACTTCAGGGTGTAGAAAGCACAGACAGCCAGAGTaGAGCACTGCAGCATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLQNPFSIASVTSGCRKHRQPE*STAASG Trigger: GCCAGATGCTGCAGTGCTTCACTCTGGCTGTCTGTG...CTTTCTACACCCTGAAGTGACTGAGGCTATGGAAAAAGGGTTCTGCAAATAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR GCA 90 bp | ACCAGTCTGTGGGCAGACCCTTCTTCCAGTAGCACCTTCTCCAAAGGCTTAACATTATCCGAGACCAGGTaGTTCAGTGTAGACACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLWADPSSSSTFSKGLTLSETR*FSVDTS Trigger: GCTAGTGTCTACACTGAAGCACCTGGTCTCGGATAA...TGTTAAGCCTTTGGAGAAGGTGCTACTGGAAGAAGGGTCTGCCCACAGACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR TCA 90 bp | ATGTACTTTGAGTACCTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATCTAGGGCCTTGCCCTTaGACAGCAGACGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYFEYLAPSKSWIHTSYYLGPCP*TADVAG Trigger: GCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAG...ATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTCAAAGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGTTTGGTGAAATTGTTCATCCACTGCCAGTACTCCTAGGCTTTTTCAGCGAGTCGACCAGTCTGTaGGCAGACCCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WMFGEIVHPLPVLLGFFSESTSL*ADPSSS Trigger: ACTGGAAGAAGGGTCTGCCCACAGACTGGTCGACTC...GCTGAAAAAGCCTAGGAGTACTGGCAGTGGATGAACAATTTCACCAAACATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CAA 72 bp | CCATCTAGTGGCCCATGCTTGGCTATCACTTCACTTTaGCTTTCTGAACACAAGGTGGAACTGCAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSSGPCLAITSL*LSEHKVELQVM Trigger: CATCACCTGCAGTTCCACCTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CAA 72 bp | TCAAGATTTGACCGACAAGGTCTATGCAGGAGGCCCTaGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATT | + |
|
Preference number: 4 (lower is better) Translates to: SRFDRQGLCRRP*GKKGKCSPNNI Trigger: AATGTTATTGGGGCTACACTTGCCTTTCTTGCCCAAGGGCCTCCTGCATAGACCTTGTCGGTCAAATCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCTGGCAATTGAACAGCAGACGTTaGTGGCGCACAGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKASVAPITFIVEWLSWQLNSRR*WRTGTF Trigger: GAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAA...TTGCCAGGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTACCTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATTATCACACTTTGGAGATCAGCTaGCAGATGGGGGTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FEYLAPSKSWIHTSYYYHTLEIS*QMGVAG Trigger: CCCAGCCACCCCCATCTGGCAGCTGATCTCCAAAGT...GTGATAATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| 3UTR CAA 72 bp | ACAAAGGCCCAGGATACTCCATCTAGTGGCCCATGCTaGGCTATCACTTCACTTTTGCTTTCTGAACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKAQDTPSSGPC*AITSLLLSEHK Trigger: CTTGTGTTCAGAAAGCAAAAGTGAAGTGATAGCCAAGCATGGGCCACTAGATGGAGTATCCTGGGCCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCTGGCAATTATCCGAGACCAGGTaGTTCAGTGTAGACACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKASVAPITFIVEWLSWQLSETR*FSVDTS Trigger: GCTAGTGTCTACACTGAAGCACCTGGTCTCGGATAA...TTGCCAGGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATTATCACTATGAGCCAGGTGTAGAAAGCGGCTaGCCAAACGTTCGATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPSKSWIHTSYYYHYEPGVESG*PNVRCH Trigger: ATGACATCGAACGTTTGGCCAGCCGCTTTCTACACC...TGGCTCATAGTGATAATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS TCA 90 bp | GCCAGAGTGAAGCACTGCAGCATCTGGCTGCTAGGGCCTTGCCCTTaGACAGCAGACGTTGCTGGCGCACAGGGACATTCAGCTTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARVKHCSIWLLGPCP*TADVAGAQGHSAYP Trigger: CGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAGTGCTTCACTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS GCA 90 bp | CTGCAGCATCTGGCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTaGTGGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQHLAARALPLNSRR*WRTGTFSLSETRCF Trigger: GAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS CCA 90 bp | CAGCATCTGGCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTGCTaGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QHLAARALPLNSRRC*RTGTFSLSETRCFS Trigger: ACTGAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR CAA 90 bp | GTCTCTACAGTGCAGCCTCAACTTTGCTGTGGGAGGCAGAAGAGAACTCAGGCCCTGGCTGCTAGGGCCTaGCCCTTGAACAGCAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTVQPQLCCGRQKRTQALAARA*PLNSRR Trigger: ACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAG...GGCCTGAGTTCTCTTCTGCCTCCCACAGCAAAGTTGAGGCTGCACTGTAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS GCA 90 bp | AGACGTTGCTGGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTaGTTCAGTGTAGACACTAGCTCGTCCTCCGCCACCTGTAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RRCWRTGTFSLSETR*FSVDTSSSSATCRL Trigger: TAGCCTACAGGTGGCGGAGGACGAGCTAGTGTCTACACTGAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 ENSMUST00000178691.2 |
||
| CDS-3UTR CAA 90 bp | GACACTGCCTTTCTGAGTCACCTGTTGTCCCTCATGGGTGAGACCTACTTCCAGGCTAGGGCCTTGCCCTaGAACAGCAGACGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DTAFLSHLLSLMGETYFQARALP*NSRRCW Trigger: CCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGC...CTGGAAGTAGGTCTCACCCATGAGGGACAACAGGTGACTCAGAAAGGCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS GCA 90 bp | AGTCGTTTTTCATCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTaGTGGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRFSSARALPLNSRR*WRTGTFSLSETRCF Trigger: GAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGAAAAACGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
||
| CDS CCA 90 bp | CGTTTTTCATCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTGCTaGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RFSSARALPLNSRRC*RTGTFSLSETRCFS Trigger: ACTGAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGAAAAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
||
| CDS TCA 90 bp | TGTTGTAATCTGACAGTCGTTTTTCATCTGCTAGGGCCTTGCCCTTaGACAGCAGACGTTGCTGGCGCACAGGGACATTCAGCTTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: CCNLTVVFHLLGPCP*TADVAGAQGHSAYP Trigger: CGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGAAAAACGACTGTCAGATTACAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCAAGAAAGGCAAGTGTAGCCCCAATAACATTCATAGTAGAGTGGCTTTCCTCATCTGCTAGGGCCTaGCCCTTGAACAGCAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: WARKASVAPITFIVEWLSSSARA*PLNSRR Trigger: ACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGA...GGAAAGCCACTCTACTATGAATGTTATTGGGGCTACACTTGCCTTTCTTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155676.8 |
||
| CDS-3UTR CAA 90 bp | TGCTATTTGCAGAACCCTTTTTCCATAGCCTCAGTCACTTCAGGGTGTAGAAAGCTTGAACAGCAGACGTaGCTGGCGCACAGGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: CYLQNPFSIASVTSGCRKLEQQT*LAHRDI Trigger: AATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAG...CTTTCTACACCCTGAAGTGACTGAGGCTATGGAAAAAGGGTTCTGCAAATAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
||
| CDS-3UTR CAA 90 bp | TTTGAGTACCTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATTATCACGCTAGGGCCTTGCCCTaGAACAGCAGACGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FEYLAPSKSWIHTSYYYHARALP*NSRRCW Trigger: CCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGC...GTGATAATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
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| CDS-3UTR CAA 90 bp | ATGTACTTTGAGTACCTAGCACCTAGCAAGAGCTGGATACATACCAGCTATTATCTTGAACAGCAGACGTaGCTGGCGCACAGGGACATT | + |
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Preference number: 5 (lower is better) Translates to: MYFEYLAPSKSWIHTSYYLEQQT*LAHRDI Trigger: AATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAG...ATAATAGCTGGTATGTATCCAGCTCTTGCTAGGTGCTAGGTACTCAAAGTACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 |
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| CDS CAA 72 bp | CAGAGTGAAGCACTGCAGCATCTGGCTGCTAGGGCCTaGCCCTTGAACAGCAGACGTTGCTGGCGCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: QSEALQHLAARA*PLNSRRCWRTG Trigger: CCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAGTGCTTCACTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS GCA 72 bp | CTGGCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTaGTGGCGCACAGGGACATTCAGCTTATCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: LAARALPLNSRR*WRTGTFSLSET Trigger: GGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS CCA 72 bp | GCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTGCTaGCGCACAGGGACATTCAGCTTATCCGAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AARALPLNSRRC*RTGTFSLSETR Trigger: CCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS CAA 72 bp | GAAGCACTGCAGCATCTGGCTGCTAGGGCCTTGCCCTaGAACAGCAGACGTTGCTGGCGCACAGGGACATTC | + |
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Preference number: 6 (lower is better) Translates to: EALQHLAARALP*NSRRCWRTGTF Trigger: GAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAGTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS CAA 90 bp | ACAGACAGCCAGAGTGAAGCACTGCAGCATCTGGCTGCTAGGGCCTaGCCCTTGAACAGCAGACGTTGCTGGCGCACAGGGACATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TDSQSEALQHLAARA*PLNSRRCWRTGTFS Trigger: GCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAGTGCTTCACTCTGGCTGTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS CAA 90 bp | AGCCAGAGTGAAGCACTGCAGCATCTGGCTGCTAGGGCCTTGCCCTaGAACAGCAGACGTTGCTGGCGCACAGGGACATTCAGCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SQSEALQHLAARALP*NSRRCWRTGTFSLS Trigger: GGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGCCAGATGCTGCAGTGCTTCACTCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015434.15 |
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| CDS GCA 72 bp | TGGCGCACAGGGACATTCAGCTTATCCGAGACCAGGTaGTTCAGTGTAGACACTAGCTCGTCCTCCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: WRTGTFSLSETR*FSVDTSSSSAT Trigger: GGTGGCGGAGGACGAGCTAGTGTCTACACTGAAGCACCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015434.15 ENSMUST00000155676.8 ENSMUST00000178691.2 |
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| CDS CCA 72 bp | TCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTGCTaGCGCACAGGGACATTCAGCTTATCCGAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SARALPLNSRRC*RTGTFSLSETR Trigger: CCTGGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
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| CDS GCA 72 bp | TCATCTGCTAGGGCCTTGCCCTTGAACAGCAGACGTTaGTGGCGCACAGGGACATTCAGCTTATCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: SSARALPLNSRR*WRTGTFSLSET Trigger: GGTCTCGGATAAGCTGAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
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| CDS CAA 72 bp | TCTGACAGTCGTTTTTCATCTGCTAGGGCCTTGCCCTaGAACAGCAGACGTTGCTGGCGCACAGGGACATTC | + |
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Preference number: 6 (lower is better) Translates to: SDSRFSSARALP*NSRRCWRTGTF Trigger: GAATGTCCCTGTGCGCCAGCAACGTCTGCTGTTCAAGGGCAAGGCCCTAGCAGATGAAAAACGACTGTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000155676.8 ENSMUST00000178691.2 |
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