Pregenerated sensors for UBL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001687Ensembl transcript IDs: ENSMUST00000079324.14, ENSMUST00000164904.2, ENSMUST00000201595.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCTCGGTGTGGGCCGGCAGCAGGGGCACCCTCTACAGAGCGCTaGGAGCAGCAGGCATGGCTTCTCACTTGCTGCAGTGACAACAGT | + |
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Preference number: 1 (lower is better) Translates to: APRCGPAAGAPSTER*EQQAWLLTCCSDNS Trigger: ACTGTTGTCACTGCAGCAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGGCCCACACCGAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 90 bp | CCTGTCCCCCTGGCTGACCAGCCTCGTATTTACTCCACCGATGATTaGTGTCCTCCAGGGTGGACTACACACAGGAGAACTGGGCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PVPLADQPRIYSTDD*CPPGWTTHRRTGRH Trigger: GTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAATACGAGGCTGGTCAGCCAGGGGGACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 90 bp | CCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATaGCTTCTCACTTGCTGCAGTGACAACAGTCTTGCCCAGTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: PAAGAPSTERWEQQA*LLTCCSDNSLAQFD Trigger: ATCAAACTGGGCAAGACTGTTGTCACTGCAGCAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 90 bp | AGTGATTCAGTCCCACGGATGTGCTGGCGACTGTCCTACAGGTGTTaGAAGCTGCTGAGTCTCCTCTGTCCCCGCAGTGCCAACAAACTG | + |
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Preference number: 1 (lower is better) Translates to: SDSVPRMCWRLSYRC*KLLSLLCPRSANKL Trigger: CAGTTTGTTGGCACTGCGGGGACAGAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAGTCGCCAGCACATCCGTGGGACTGAATCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR TCA 90 bp | CTCACTTGCTGCAGTGACAACAGTCTTGCCCAGTTTGATATCCTGTaGGGACAGCCACTGCGGCCGACTTTGGTAGAAGTCACCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LTCCSDNSLAQFDIL*GQPLRPTLVEVTQH Trigger: GTGCTGGGTGACTTCTACCAAAGTCGGCCGCAGTGGCTGTCCTCACAGGATATCAAACTGGGCAAGACTGTTGTCACTGCAGCAAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR TCA 90 bp | CCTGATTGCATTGAAACAAGGATGACCTTAGAGACCATTTACATCTaGTGCTGCAGAGGGCCAGGAGCCCTCGTTAAATACAGAACACAA | + |
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Preference number: 1 (lower is better) Translates to: PDCIETRMTLETIYI*CCRGPGALVKYRTQ Trigger: TTGTGTTCTGTATTTAACGAGGGCTCCTGGCCCTCTGCAGCATCAGATGTAAATGGTCTCTAAGGTCATCCTTGTTTCAATGCAATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079324.14 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTTCCTTCCTGTCCCCCTaGCTGACCAGCCTCGTATTT | + |
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Preference number: 2 (lower is better) Translates to: AGSRGTLYRALGAAGMASSFLSP*LTSLVF Trigger: AAATACGAGGCTGGTCAGCCAGGGGGACAGGAAGGA...AGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTCAGTCCCACGGATGTaGTGGCGACTGTCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: AAGAPSTERWEQQAWLLTSVPRM*WRLSYR Trigger: CCTGTAGGACAGTCGCCAGCACATCCGTGGGACTGA...AGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTCTGTCCTACAGGTGTTaGAAGCTGCTGAGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AAGAPSTERWEQQAWLLTLSYRC*KLLSLL Trigger: GAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAG...AGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTGTGGTGTCCTCCAGGGTaGACTACACACAGGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: SRGTLYRALGAAGMASHLWCPPG*TTHRRT Trigger: AGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCA...CAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTACTTGCAGCACTTGCCTTCAGACTTCTGCGGAGGGAGGAGTCTCTGCGGCTCAGTCCCACGGATGTaGTGGCGACTGTCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LYLQHLPSDFCGGRSLCGSVPRM*WRLSYR Trigger: CCTGTAGGACAGTCGCCAGCACATCCGTGGGACTGA...GCCGCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTGCTGCAAGTACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | CCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCAGTGCAAATTGTACTTaGAGCACTTGCCTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: PAAGAPSTERWEQQAWLLSANCT*STCLQT Trigger: AGTCTGAAGGCAAGTGCTGCAAGTACAATTTGCACT...GAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | ATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTGGGCGCCACAGACACTTGCTGCGTCCCCTaGGGACCACTGTGCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: MIGVLQGGLHTGELGATDTCCVP*GPLCTS Trigger: TGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGT...GTCTGTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | CGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCCCTGCCCTGGGGACCACTGTaGACTTCAGACTGCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: RPTLVEVTQHVRFLPVPLPWGPL*TSDCST Trigger: TGTTGAGCAGTCTGAAGTGCACAGTGGTCCCCAGGG...CAGGGGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | ATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTGGGCGCCACAGACTTGCCTTCAGACTTCTaGGGAGGGAGGAGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: MIGVLQGGLHTGELGATDLPSDF*GGRSLC Trigger: GCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAA...GTCTGTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | CGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCCCTGTTGCCTTCAGACTTCTaGGGAGGGAGGAGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RPTLVEVTQHVRFLPVPLLPSDF*GGRSLC Trigger: GCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAA...CAGGGGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | ATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTGGGCGCCACAGACCTGTCCTACAGGTGTTaGAAGCTGCTGAGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: MIGVLQGGLHTGELGATDLSYRC*KLLSLL Trigger: GAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAG...GTCTGTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | TATCCTGTGAGGACAGCCACTGCGGCCGACTTTGGTAGAAGTCACCCAGCACGTGGCGCCACAGACACGTaGAGATTATGTGATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YPVRTATAADFGRSHPARGATDT*RLCDEE Trigger: TTCCTCATCACATAATCTGCACGTGTCTGTGGCGCC...ACGTGCTGGGTGACTTCTACCAAAGTCGGCCGCAGTGGCTGTCCTCACAGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | GTATTTACTCCACCGATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAATCAGTCCCACGGATGTaGTGGCGACTGTCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: VFTPPMIGVLQGGLHTGESVPRM*WRLSYR Trigger: CCTGTAGGACAGTCGCCAGCACATCCGTGGGACTGA...TTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCATCCTGTCCCCCTGGCTaGCCAGCCTCGTATTTACTC | + |
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Preference number: 2 (lower is better) Translates to: HLETLKDPSALVNECNPASCPPG*PASYLL Trigger: GAGTAAATACGAGGCTGGTCAGCCAGGGGGACAGGA...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGACTGCTCAACACACACACAAATAAAGGACCACACTaGAAGTGTTCTTGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LLRPLGTTVHFRLLNTHTNKGPH*KCSWFF Trigger: AAAGAACCAAGAACACTTTCAGTGTGGTCCTTTATT...TGTGTGTGTGTTGAGCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCAGGCGCCACAGACACGTaGAGATTATGTGATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLETLKDPSALVNECNPAGATDT*RLCDEE Trigger: TTCCTCATCACATAATCTGCACGTGTCTGTGGCGCC...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCATGGCTTCTCACTTGCTaGAGTGACAACAGTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLETLKDPSALVNECNPAWLLTC*SDNSLA Trigger: GGCAAGACTGTTGTCACTGCAGCAAGTGAGAAGCCA...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGCGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCAATAAAGGACCACACTaGAAGTGTTCTTGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TAADFGRSHPARKIPSCPNKGPH*KCSWFF Trigger: AAAGAACCAAGAACACTTTCAGTGTGGTCCTTTATT...GGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTACTCCACCGATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTCTGTGCACTTCAGACTaGTCAACACACACACAGATA | + |
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Preference number: 2 (lower is better) Translates to: IYSTDDWCPPGWTTHRRTLCTSD*STHTQI Trigger: TATCTGTGTGTGTGTTGAGCAGTCTGAAGTGCACAG...AGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGAACTGGGCGCCACAGACACGTGCAGATTATGTGATGAGGAAAATAATAATCTGTCCTACAGGTGTTaGAAGCTGCTGAGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GELGATDTCRLCDEENNNLSYRC*KLLSLL Trigger: GAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAG...ATTATTATTTTCCTCATCACATAATCTGCACGTGTCTGTGGCGCCCAGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR TCA 90 bp | TGCAAATTGTACTTGCAGCACTTGCCTTCAGACTTCTGCGGAGGGAGGAGTCTCAATAAAGGACCACACTaGAAGTGTTCTTGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CKLYLQHLPSDFCGGRSLNKGPH*KCSWFF Trigger: AAAGAACCAAGAACACTTTCAGTGTGGTCCTTTATT...GAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTGCTGCAAGTACAATTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR TCA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGTCCTGTCCCCCTGGCTaGCCAGCCTCGTATTTACTC | + |
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Preference number: 2 (lower is better) Translates to: VCLKTQLVILIQLQALIPSCPPG*PASYLL Trigger: GAGTAAATACGAGGCTGGTCAGCCAGGGGGACAGGA...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGTTGCCTTCAGACTTCTaGGGAGGGAGGAGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VCLKTQLVILIQLQALIPLPSDF*GGRSLC Trigger: GCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAA...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CCA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGTCCTTCCTGTCCCCCTaGCTGACCAGCCTCGTATTT | + |
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Preference number: 2 (lower is better) Translates to: VCLKTQLVILIQLQALIPSFLSP*LTSLVF Trigger: AAATACGAGGCTGGTCAGCCAGGGGGACAGGAAGGA...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGAACTGGGCGCCACAGACACGTGCAGATTATGTGATGAGGAAAATAATAATAGTGCAAATTGTACTTaGAGCACTTGCCTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: GELGATDTCRLCDEENNNSANCT*STCLQT Trigger: AGTCTGAAGGCAAGTGCTGCAAGTACAATTTGCACT...ATTATTATTTTCCTCATCACATAATCTGCACGTGTCTGTGGCGCCCAGTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CAA 90 bp | CGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCATGTCTGCAGAGAGACTaGCTGCGTCCCCTGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: RQQGHPLQSAGSSRHGFSCLQRD*LRPLGT Trigger: GGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACA...TGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR GCA 72 bp | GGCAGCAGGGCCACCGGTGTCTGCAGAGAGACTTGCTaGGTCCCCTGGGGACCACTGTGCACTTCAGACTGC | + |
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Preference number: 3 (lower is better) Translates to: GSRATGVCRETC*VPWGPLCTSDC Trigger: GCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACACCGGTGGCCCTGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR GCA 72 bp | TGCGGCAGCAGGGCCACCGGTGTCTGCAGAGAGACTTaGTGCGTCCCCTGGGGACCACTGTGCACTTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: CGSRATGVCRET*CVPWGPLCTSD Trigger: GTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACACCGGTGGCCCTGCTGCCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR GCA 72 bp | CACTTGCCTTCAGACTTCTGCGGAGGGAGGAGTCTCTaGGGCAGCAGGGCCACCGGTGTCTGCAGAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: HLPSDFCGGRSL*GSRATGVCRET Trigger: AGTCTCTCTGCAGACACCGGTGGCCCTGCTGCCGCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 72 bp | GTCCCACGGATGTGCTGGCGACTGTCCTACAGGTGTTaGAAGCTGCTGAGTCTCCTCTGTCCCCGCAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: VPRMCWRLSYRC*KLLSLLCPRSA Trigger: GGCACTGCGGGGACAGAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAGTCGCCAGCACATCCGTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 72 bp | GGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATaGCTTCTCACTTGCTGCAGTGACAACAGTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GAPSTERWEQQA*LLTCCSDNSLA Trigger: GGCAAGACTGTTGTCACTGCAGCAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR GCA 72 bp | TGCAAATTGTACTTGCAGCACTTGCCTTCAGACTTCTaGGGAGGGAGGAGTCTCTGCGGCAGCAGGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: CKLYLQHLPSDF*GGRSLCGSRAT Trigger: GGTGGCCCTGCTGCCGCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTGCTGCAAGTACAATTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR-3UTR CAA 90 bp | AAATTGTACTTGCAGCACTTGCCTTCAGACTTCTGCGGAGGGAGGAGTCTCTGCTGTCTGCAGAGAGACTaGCTGCGTCCCCTGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: KLYLQHLPSDFCGGRSLCCLQRD*LRPLGT Trigger: GGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACA...GCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTGCTGCAAGTACAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR TCA 72 bp | TATCTGCCACTCAGGCTTCCCACCAGTTCTGCACAGTaGCGGCCCCTCCACATTAAGGCTTGGGTCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: YLPLRLPTSSAQ*RPLHIKAWVIL Trigger: CAGGATGACCCAAGCCTTAATGTGGAGGGGCCGTCACTGTGCAGAACTGGTGGGAAGCCTGAGTGGCAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR GCA 72 bp | GAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTGCTaGAGTGACAACAGTCTTGCCCAGTTTGATATCCTG | + |
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Preference number: 3 (lower is better) Translates to: ERWEQQAWLLTC*SDNSLAQFDIL Trigger: CAGGATATCAAACTGGGCAAGACTGTTGTCACTGCAGCAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 72 bp | TTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTaGGCGCCACAGACACGTGCAGATTATGTGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LVSSRVDYTQEN*APQTRADYVMR Trigger: CCTCATCACATAATCTGCACGTGTCTGTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| 3UTR CCA 72 bp | CGTATTTACTCCACCGATGATTGGTGTCCTCCAGGGTaGACTACACACAGGAGAACTGGGCGCCACAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: RIYSTDDWCPPG*TTHRRTGRHRH Trigger: GTGTCTGTGGCGCCCAGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| 3UTR CCA 72 bp | CTGGCTGACCAGCCTCGTATTTACTCCACCGATGATTaGTGTCCTCCAGGGTGGACTACACACAGGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LADQPRIYSTDD*CPPGWTTHRRT Trigger: AGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAATACGAGGCTGGTCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| 3UTR TCA 72 bp | TGCAGTGACAACAGTCTTGCCCAGTTTGATATCCTGTaGGGACAGCCACTGCGGCCGACTTTGGTAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CSDNSLAQFDIL*GQPLRPTLVEV Trigger: GACTTCTACCAAAGTCGGCCGCAGTGGCTGTCCTCACAGGATATCAAACTGGGCAAGACTGTTGTCACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| 3UTR-3UTR CAA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGTGTCTGCAGAGAGACTaGCTGCGTCCCCTGGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: VCLKTQLVILIQLQALIPCLQRD*LRPLGT Trigger: GGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACA...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| 3UTR TCA 72 bp | ATTGAAACAAGGATGACCTTAGAGACCATTTACATCTaGTGCTGCAGAGGGCCAGGAGCCCTCGTTAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: IETRMTLETIYI*CCRGPGALVKY Trigger: GTATTTAACGAGGGCTCCTGGCCCTCTGCAGCATCAGATGTAAATGGTCTCTAAGGTCATCCTTGTTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079324.14 |
||
| 3UTR CAA 72 bp | CTGCGGCAGCAGGGCCACCGGTGTCTGCAGAGAGACTaGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRQQGHRCLQRD*LRPLGTTVHFR Trigger: TCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACACCGGTGGCCCTGCTGCCGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | CCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCGAATGTTTGGGCTGCTaGCCTGCTCTTCTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAAGAPSTERWEQQAWLLECLGC*PALLPS Trigger: ACTGGGAAGAAGAGCAGGTCAGCAGCCCAAACATTC...GAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | CTGCGGAGGGAGGAGTCTCTGCGGCAGCAGGGCCACCGGTGTCTGCAGAGAGACATTTCTCTGACCTTGTaGGTTGGGCTCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRREESLRQQGHRCLQRDISLTL*VGLWQG Trigger: ACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAAT...GTCTCTCTGCAGACACCGGTGGCCCTGCTGCCGCAGAGACTCCTCCCTCCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | CCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCATTTCTCTGACCTTGTaGGTTGGGCTCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAAGAPSTERWEQQAWLLISLTL*VGLWQG Trigger: ACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAAT...GAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | CCGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCGGATCACACAGCAGTTaGTCTCACCAGTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAAGAPSTERWEQQAWLLGSHSS*SHQFSP Trigger: GGGAGAAAACTGGTGAGAGCAACTGCTGTGTGATCC...GAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| 3UTR CAA 72 bp | AGTCCCACGGATGTGCTGGCGACTGTCCTACAGGTGTaGGAAGCTGCTGAGTCTCCTCTGTCCCCGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTDVLATVLQV*EAAESPLSPQC Trigger: GCACTGCGGGGACAGAGGAGACTCAGCAGCTTCCAACACCTGTAGGACAGTCGCCAGCACATCCGTGGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGACTTCTGCGGAGGGAGGAGTCTCTGCGGCAGCAGGGCCACCGGTGTCGTCATACACGTGCTTTaGGATGTCAGAGGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDFCGGRSLCGSRATGVVIHVL*DVRGRV Trigger: GACTCTGCCTCTGACATCGCAAAGCACGTGTATGAC...GACACCGGTGGCCCTGCTGCCGCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTCTGGCAGGGTCTCTCTaGCCACCAAATGCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QQGHPLQSAGSSRHGFSLLAGSL*PPNASL Trigger: CAGTGATGCATTTGGTGGCCAGAGAGACCCTGCCAG...AAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTGGAATGTTTGGGCTGCTaGCCTGCTCTTCTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGTLYRALGAAGMASHLECLGC*PALLPS Trigger: ACTGGGAAGAAGAGCAGGTCAGCAGCCCAAACATTC...CAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTGTCATACACGTGCTTTaGGATGTCAGAGGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGAPSTERWEQQAWLLTVIHVL*DVRGRV Trigger: GACTCTGCCTCTGACATCGCAAAGCACGTGTATGAC...AGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTGTTTGGGCTGCTGACCTaGTCTTCTTCCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRGTLYRALGAAGMASHLFGLLT*SSSQSM Trigger: CATGGACTGGGAAGAAGAGCAGGTCAGCAGCCCAAA...CAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTGGATCACACAGCAGTTaGTCTCACCAGTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGAPSTERWEQQAWLLTGSHSS*SHQFSP Trigger: GGGAGAAAACTGGTGAGAGCAACTGCTGTGTGATCC...AGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCAAGAGGCAGAGTCGTTTaGGGAGAAGAGGAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQQGHPLQSAGSSRHGFSRGRVV*GEEELF Trigger: AAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCT...TGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTGAGAGGCAGAGTCGTTTaGGGAGAAGAGGAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGTLYRALGAAGMASHLRGRVV*GEEELF Trigger: AAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCT...CAAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | CGGTGTCTGCAGAGAGACTTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGAGAGTCGAAGAATGTTTaGGCTGCTGACCTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLQRDLLRPLGTTVHFRESKNV*AADLLF Trigger: GAAGAGCAGGTCAGCAGCCCAAACATTCTTCGACTC...TCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGACACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | TATCCTGTGAGGACAGCCACTGCGGCCGACTTTGGTAGAAGTCACCCAGCACGTTCTGACCTTGTGAGTTaGGCTCTGGCAGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPVRTATAADFGRSHPARSDLVS*ALAGSL Trigger: GAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGA...ACGTGCTGGGTGACTTCTACCAAAGTCGGCCGCAGTGGCTGTCCTCACAGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGACTGCTCAACACACACAATTTCTCTGACCTTGTaGGTTGGGCTCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCCVPWGPLCTSDCSTHTISLTL*VGLWQG Trigger: ACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAAT...TGTGTGTGTTGAGCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTTCTCTGGCCACCAAATaGATCACTGTTGTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQGHPLQSAGSSRHGFSLSLATK*ITVVLP Trigger: TGGCAAAACAACAGTGATGCATTTGGTGGCCAGAGA...AAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGAGAGACTTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGACTGCAGAGGCAGAGTCGTTTaGGGAGAAGAGGAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCRETCCVPWGPLCTSDCRGRVV*GEEELF Trigger: AAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCT...GCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGTCTCTCTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | TGTACTTGCAGCACTTGCCTTCAGACTTCTGCGGAGGGAGGAGTCTCTGCGGCAGTCATACACGTGCTTTaGGATGTCAGAGGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTCSTCLQTSAEGGVSAAVIHVL*DVRGRV Trigger: GACTCTGCCTCTGACATCGCAAAGCACGTGTATGAC...TGCCGCAGAGACTCCTCCCTCCGCAGAAGTCTGAAGGCAAGTGCTGCAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGACTGCTCAACACACACAGGATCACACAGCAGTTaGTCTCACCAGTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TCCVPWGPLCTSDCSTHTGSHSS*SHQFSP Trigger: GGGAGAAAACTGGTGAGAGCAACTGCTGTGTGATCC...TGTGTGTGTTGAGCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCCCTGAGTCGAAGAATGTTTaGGCTGCTGACCTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AADFGRSHPARKIPSCPPESKNV*AADLLF Trigger: GAAGAGCAGGTCAGCAGCCCAAACATTCTTCGACTC...AGGGGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | TTGCTGCGTCCCCTGGGGACCACTGTGCACTTCAGACTGCTCAACACACACACATCTCTGGCCACCAAATaGATCACTGTTGTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRPLGTTVHFRLLNTHTSLATK*ITVVLP Trigger: TGGCAAAACAACAGTGATGCATTTGGTGGCCAGAGA...TGTGTGTGTGTTGAGCAGTCTGAAGTGCACAGTGGTCCCCAGGGGACGCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | ATTTACTCCACCGATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTCTGGCAGGGTCTCTCTaGCCACCAAATGCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSTDDWCPPGWTTHRRTLAGSL*PPNASL Trigger: CAGTGATGCATTTGGTGGCCAGAGAGACCCTGCCAG...AGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCATCTGACCTTGTGAGTTaGGCTCTGGCAGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLETLKDPSALVNECNPASDLVS*ALAGSL Trigger: GAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGA...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | ACTGCGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCATCTGCCTTGATAAATaGGTCGAAGAATGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAADFGRSHPARKIPSCPICLDK*VEECLG Trigger: GCCCAAACATTCTTCGACTCATTTATCAAGGCAGAT...GGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCATTTGGGCTGCTGACCTaGTCTTCTTCCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLETLKDPSALVNECNPAFGLLT*SSSQSM Trigger: CATGGACTGGGAAGAAGAGCAGGTCAGCAGCCCAAA...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | GGAGAACTGGGCGCCACAGACACGTGCAGATTATGTGATGAGGAAAATAATAATTCTGACCTTGTGAGTTaGGCTCTGGCAGGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GELGATDTCRLCDEENNNSDLVS*ALAGSL Trigger: GAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGA...ATTATTATTTTCCTCATCACATAATCTGCACGTGTCTGTGGCGCCCAGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCACTTCAGACTGCTCAACACACACACAGATATAAGGAATAAAGGACCACTGGCAGGGTCTCTCTaGCCACCAAATGCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVHFRLLNTHTDIRNKGPLAGSL*PPNASL Trigger: CAGTGATGCATTTGGTGGCCAGAGAGACCCTGCCAG...TGGTCCTTTATTCCTTATATCTGTGTGTGTGTTGAGCAGTCTGAAGTGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | ATTTACTCCACCGATGATTGGTGTCCTCCAGGGTGGACTACACACAGGAGAACTATCTGCCTTGATAAATaGGTCGAAGAATGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYSTDDWCPPGWTTHRRTICLDK*VEECLG Trigger: GCCCAAACATTCTTCGACTCATTTATCAAGGCAGAT...AGTTCTCCTGTGTGTAGTCCACCCTGGAGGACACCAATCATCGGTGGAGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR GCA 90 bp | CATCTGGAGACTTTAAAAGATCCCTCTGCTCTAGTGAATGAGTGCAACCCGGCATCTCTGGCCACCAAATaGATCACTGTTGTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLETLKDPSALVNECNPASLATK*ITVVLP Trigger: TGGCAAAACAACAGTGATGCATTTGGTGGCCAGAGA...TGCCGGGTTGCACTCATTCACTAGAGCAGAGGGATCTTTTAAAGTCTCCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR TCA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGGAATGTTTGGGCTGCTaGCCTGCTCTTCTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLKTQLVILIQLQALIPECLGC*PALLPS Trigger: ACTGGGAAGAAGAGCAGGTCAGCAGCCCAAACATTC...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS GCA 90 bp | CTGACCTGCTCTTCTTCCCAGTCCATGGGCCAGTTGTCATACACGTaGTTTGCGATGTCAGAGGCAGAGTCGTTTGGGGAGAAGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTCSSSQSMGQLSYT*FAMSEAESFGEKRN Trigger: GTTCCTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGGCCCATGGACTGGGAAGAAGAGCAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS TCA 90 bp | AGGATCACACAGCAGTTGCTCTCACCAGTTTTCTCCCGATTTCTCTaGCCTTGTGAGTTGGGCTCTGGCAGGGTCTCTCTGGCCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RITQQLLSPVFSRFL*PCELGSGRVSLATK Trigger: TTTGGTGGCCAGAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAATCGGGAGAAAACTGGTGAGAGCAACTGCTGTGTGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGGGCACCCTCTACAGAGCGCTGGGAGCAGCAGGCATGGCTTCTCACTTCCAAATGCATCACTGTaGTTTTGCCAAAAGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QQGHPLQSAGSSRHGFSLPNASL*FCQKEV Trigger: AACTTCCTTTTGGCAAAACAACAGTGATGCATTTGG...AAGTGAGAAGCCATGCCTGCTGCTCCCAGCGCTCTGTAGAGGGTGCCCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS GCA 90 bp | CTGCTCTTCTTCCCAGTCCATGGGCCAGTTGTCATACACGTGCTTTaGGATGTCAGAGGCAGAGTCGTTTGGGGAGAAGAGGAACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFFPVHGPVVIHVL*DVRGRVVWGEEELF Trigger: AAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGGCCCATGGACTGGGAAGAAGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS CCA 90 bp | AGTTGCTCTCACCAGTTTTCTCCCGATTTCTCTGACCTTGTGAGTTaGGCTCTGGCAGGGTCTCTCTGGCCACCAAATGCATCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSHQFSPDFSDLVS*ALAGSLWPPNASLL Trigger: CAACAGTGATGCATTTGGTGGCCAGAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAATCGGGAGAAAACTGGTGAGAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
||
| CDS CCA 90 bp | CCAGTTGTCATACACGTGCTTTGCGATGTCAGAGGCAGAGTCGTTTaGGGAGAAGAGGAACTCTTTCGTCTTCCCACTCACCAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVVIHVLCDVRGRVV*GEEELFRLPTHQDE Trigger: CTCATCTTGGTGAGTGGGAAGACGAAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS-3UTR CAA 90 bp | CGGCCGACTTTGGTAGAAGTCACCCAGCACGTAAGATTCCTTCCTGTCCCCCTGCCAAATGCATCACTGTaGTTTTGCCAAAAGGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: RPTLVEVTQHVRFLPVPLPNASL*FCQKEV Trigger: AACTTCCTTTTGGCAAAACAACAGTGATGCATTTGG...CAGGGGGACAGGAAGGAATCTTACGTGCTGGGTGACTTCTACCAAAGTCGGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS-3UTR CAA 90 bp | GTATGCCTTAAAACTCAGCTTGTGATTTTAATACAATTGCAAGCACTGATTCCGCCAAATGCATCACTGTaGTTTTGCCAAAAGGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: VCLKTQLVILIQLQALIPPNASL*FCQKEV Trigger: AACTTCCTTTTGGCAAAACAACAGTGATGCATTTGG...CGGAATCAGTGCTTGCAATTGTATTAAAATCACAAGCTGAGTTTTAAGGCATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS CAA 90 bp | ATGTTTGGGCTGCTGACCTGCTCTTCTTCCCAGTCCATGGGCCAGTaGTCATACACGTGCTTTGCGATGTCAGAGGCAGAGTCGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: MFGLLTCSSSQSMGQ*SYTCFAMSEAESFG Trigger: CCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGGCCCATGGACTGGGAAGAAGAGCAGGTCAGCAGCCCAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS TCA 72 bp | CAGCAGTTGCTCTCACCAGTTTTCTCCCGATTTCTCTaGCCTTGTGAGTTGGGCTCTGGCAGGGTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QQLLSPVFSRFL*PCELGSGRVSL Trigger: CAGAGAGACCCTGCCAGAGCCCAACTCACAAGGTCAGAGAAATCGGGAGAAAACTGGTGAGAGCAACTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS GCA 72 bp | TTCCCAGTCCATGGGCCAGTTGTCATACACGTGCTTTaGGATGTCAGAGGCAGAGTCGTTTGGGGAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FPVHGPVVIHVL*DVRGRVVWGEE Trigger: CTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGGCCCATGGACTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS CAA 72 bp | CTTCCCAGTCCATGGGCCAGTTGTCATACACGTGCTTaGCGATGTCAGAGGCAGAGTCGTTTGGGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPSPWASCHTRA*RCQRQSRLGRR Trigger: TCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATGACAACTGGCCCATGGACTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS CCA 72 bp | ATACACGTGCTTTGCGATGTCAGAGGCAGAGTCGTTTaGGGAGAAGAGGAACTCTTTCGTCTTCCCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: IHVLCDVRGRVV*GEEELFRLPTH Trigger: GTGAGTGGGAAGACGAAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS CAA 72 bp | CATACACGTGCTTTGCGATGTCAGAGGCAGAGTCGTTaGGGGAGAAGAGGAACTCTTTCGTCTTCCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: HTRALRCQRQSR*GRRGTLSSSHS Trigger: TGAGTGGGAAGACGAAAGAGTTCCTCTTCTCCCCAAACGACTCTGCCTCTGACATCGCAAAGCACGTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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| CDS CAA 90 bp | GGCTCTGGCAGGGTCTCTCTGGCCACCAAATGCATCACTGTTGTTTaGCCAAAAGGAAGTTTTAATGCTCCTAGGGTGACGTTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: GSGRVSLATKCITVV*PKGSFNAPRVTFPC Trigger: ACATGGAAACGTCACCCTAGGAGCATTAAAACTTCCTTTTGGCAAAACAACAGTGATGCATTTGGTGGCCAGAGAGACCCTGCCAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079324.14 ENSMUST00000164904.2 ENSMUST00000201595.4 |
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