Pregenerated sensors for UBIAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047719Ensembl transcript IDs: ENSMUST00000051633.3
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCCCACAGTCTGGCACTGGAAACAGACGGAGGGACAGAGATCCTaGGTAGGCAAGAGGAATACCAGGGGAGGCAGCTGGGAGGGGACA | + |
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Preference number: 1 (lower is better) Translates to: LPTVWHWKQTEGQRS*VGKRNTRGGSWEGT Trigger: TGTCCCCTCCCAGCTGCCTCCCCTGGTATTCCTCTTGCCTACCCAGGATCTCTGTCCCTCCGTCTGTTTCCAGTGCCAGACTGTGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 90 bp | AACACACAAGTTCAGGAGTTTGCAGCCTATGCTGTGCACCCACCCTaGCCAGTGGCACCCCTTCTCAGTCTCTGGCTTCTGCACTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: NTQVQEFAAYAVHPP*PVAPLLSLWLLHCL Trigger: CAGGCAGTGCAGAAGCCAGAGACTGAGAAGGGGTGCCACTGGCCAGGGTGGGTGCACAGCATAGGCTGCAAACTCCTGAACTTGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 90 bp | CAAGAGGAATACCAGGGGAGGCAGCTGGGAGGGGACAAAGCCCTTTaGGCTTTAAACGCCCATCCCACTGCCACTTCAGGTCCCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: QEEYQGRQLGGDKAL*ALNAHPTATSGPRI Trigger: GATTCTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCCCCTCCCAGCTGCCTCCCCTGGTATTCCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 90 bp | GGCTTTAAACGCCCATCCCACTGCCACTTCAGGTCCCAGAATCACTaGCTTCCTAGTGGAGTCTACAGAGGGAAGCAGCTCCCTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: GFKRPSHCHFRSQNH*LPSGVYRGKQLPQP Trigger: TGGCTGAGGGAGCTGCTTCCCTCTGTAGACTCCACTAGGAAGGCAGTGATTCTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 90 bp | GCTGGGAGGGGACAAAGCCCTTTGGGCTTTAAACGCCCATCCCACTaGCACTTCAGGTCCCAGAATCACTGCCTTCCTAGTGGAGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: AGRGQSPLGFKRPSH*HFRSQNHCLPSGVY Trigger: GTAGACTCCACTAGGAAGGCAGTGATTCTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCCCCTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR TCA 90 bp | AGTGCTTTTCTCAGCCGCCCCAGGCTTAACTGTCTTGCTACAGGGTaGTCTGACACTTTCCTCCACAGTGGCGAGGATCGAAGGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: SAFLSRPRLNCLATG*SDTFLHSGEDRRET Trigger: TGTCTCCCTTCGATCCTCGCCACTGTGGAGGAAAGTGTCAGATCACCCTGTAGCAAGACAGTTAAGCCTGGGGCGGCTGAGAAAAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 90 bp | CTTTCTCTGGCAGGGCCTCACATTCCAGCTGAGTGTGGCCAGGACTaGTGTCCACTGACTCATACATTCAGAAGGTCCCTGATTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LSLAGPHIPAECGQD*CPLTHTFRRSLICP Trigger: TGGGCAAATCAGGGACCTTCTGAATGTATGAGTCAGTGGACAGCAGTCCTGGCCACACTCAGCTGGAATGTGAGGCCCTGCCAGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR TCA 90 bp | CTGATTTGCCCATCTTGTGGCTCTGTGGAGAGGGGTAAGTGTCCTTaGCTCATGTGTTGCTGTTGCCCACAGTCTGGCACTGGAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: LICPSCGSVERGKCP*LMCCCCPQSGTGNR Trigger: TCTGTTTCCAGTGCCAGACTGTGGGCAACAGCAACACATGAGTCAAGGACACTTACCCCTCTCCACAGAGCCACAAGATGGGCAAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 90 bp | GCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGCACACTGGAGATaGTATGATCATCTCCATGCAAGATGTTATACTCAGAGAGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: AAPFRAADQSKAHWR*YDHLHARCYTQRGY Trigger: GTACCCTCTCTGAGTATAACATCTTGCATGGAGATGATCATACCATCTCCAGTGTGCTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 90 bp | GAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGCACACTaGAGATGGTATGATCATCTCCATGCAAGATGTTATACTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: EPAAPFRAADQSKAH*RWYDHLHARCYTQR Trigger: TCTCTGAGTATAACATCTTGCATGGAGATGATCATACCATCTCCAGTGTGCTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 90 bp | AACACAGGAACGACACTAGAGTGGCTTCAGGGTTTCCCTGTAACATaGAACACAAATCACGAGCAGGTTATCTTTAGGAAGATAATCCCA | + |
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Preference number: 1 (lower is better) Translates to: NTGTTLEWLQGFPVT*NTNHEQVIFRKIIP Trigger: TGGGATTATCTTCCTAAAGATAACCTGCTCGTGATTTGTGTTCCATGTTACAGGGAAACCCTGAAGCCACTCTAGTGTCGTTCCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCACAGGCAGGACACTCAAAAGCACCAGACGTACAAACCCAGCACGCTGGGGTGCAGGCTAAGAGCCTaGAGCCCCCTTCAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GHRQDTQKHQTYKPSTLGCRLRA*SPLQGS Trigger: GCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCA...CCCCAGCGTGCTGGGTTTGTACGTCTGGTGCTTTTGAGTGTCCTGCCTGTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 90 bp | GCAAGAGGAATACCAGGGGAGGCAGCTGGGAGGGGACAAAGCCCTTaGGGCTTTAAACGCCCATCCCACTGCCACTTCAGGTCCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ARGIPGEAAGRGQSP*GFKRPSHCHFRSQN Trigger: ATTCTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCCCCTCCCAGCTGCCTCCCCTGGTATTCCTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGCTAAGAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGCACGAGTGTGGCCAGGACTaGTGTCCACTGACTCATACA | + |
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Preference number: 2 (lower is better) Translates to: LQAKSLQPPSGQLIRVKHECGQD*CPLTHT Trigger: TGTATGAGTCAGTGGACAGCAGTCCTGGCCACACTC...GTGCTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGCAGGCTAAGAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGCCCCTTCTCAGTCTCTaGCTTCTGCACTGCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: FLQAKSLQPPSGQLIRVKPLLSL*LLHCLR Trigger: CCTCAGGCAGTGCAGAAGCCAGAGACTGAGAAGGGG...CTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGATGTTATACTCAGAGAGGGTACAGAAGACAGCGAGACACCTCTGGTCCGCTGTGCACCCACCCTaGCCAGTGGCACCCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: CKMLYSERVQKTARHLWSAVHPP*PVAPLL Trigger: GAGAAGGGGTGCCACTGGCCAGGGTGGGTGCACAGC...GGACCAGAGGTGTCTCGCTGTCTTCTGTACCCTCTCTGAGTATAACATCTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAGCTCCCTCAGCCACCATGCCATGTTTTACTGAAAGCAGAGTGCTTTTCCCTGAGGAGGGGCTGTaGTGTGGTGGGAGTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EAAPSATMPCFTESRVLFPEEGL*CGGSCW Trigger: CCAGCAACTCCCACCACAGCACAGCCCCTCCTCAGG...GAAAAGCACTCTGCTTTCAGTAAAACATGGCATGGTGGCTGAGGGAGCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 90 bp | ACTGAAAGCAGAGTGCTTTTCTCAGCCGCCCCAGGCTTAACTGTCTaGCTACAGGGTGATCTGACACTTTCCTCCACAGTGGCGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: TESRVLFSAAPGLTV*LQGDLTLSSTVARI Trigger: GATCCTCGCCACTGTGGAGGAAAGTGTCAGATCACCCTGTAGCAAGACAGTTAAGCCTGGGGCGGCTGAGAAAAGCACTCTGCTTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGCAGGCTAAGAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGTTACTGAAAGCAGAGTaGTTTTCTCAGCCGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLQAKSLQPPSGQLIRVKLLKAE*FSQPPQ Trigger: CTGGGGCGGCTGAGAAAAGCACTCTGCTTTCAGTAA...CTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 90 bp | CAGGTTATCTTTAGGAAGATAATCCCAACACACAAGTTCAGGAGTTaGCAGCCTATGCTGTGCACCCACCCTGGCCAGTGGCACCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QVIFRKIIPTHKFRS*QPMLCTHPGQWHPF Trigger: GAAGGGGTGCCACTGGCCAGGGTGGGTGCACAGCATAGGCTGCAAACTCCTGAACTTGTGTGTTGGGATTATCTTCCTAAAGATAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACTGTCTTGCTACAGGGTaGTCTGACACTTTCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TQHAGENRKEHPVPRILDCLATG*SDTFLH Trigger: GTGGAGGAAAGTGTCAGATCACCCTGTAGCAAGACA...GTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCAGGCTAAGAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGAGGACTGCTGTCCACTaGCTCATACATTCAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: FLQAKSLQPPSGQLIRVKRTAVH*LIHSEG Trigger: ACCTTCTGAATGTATGAGTCAGTGGACAGCAGTCCT...CTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACCCTGATTCAAGCTCTGGGAGGGGACAAAGCCCTTTaGGCTTTAAACGCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: TGKNILFLGFWTLIQALGGDKAL*ALNAHP Trigger: GGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCCCC...TCCCAGAGCTTGAATCAGGGTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 90 bp | TGCCAAGGTAACGGGTCAGTACCATGCCTAGTTACTATGGCTCTTTaGGGACACAGCTCCTTCACAAACTGTCAGGGCATTCTGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: CQGNGSVPCLVTMAL*GHSSFTNCQGILSR Trigger: CCTAGACAGAATGCCCTGACAGTTTGTGAAGGAGCTGTGTCCCAAAAGAGCCATAGTAACTAGGCATGGTACTGACCCGTTACCTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCAGGCTAAGAGCCTGCAGCCCCCTTCAGGGCAGCTGATCAGAGTAAAGCATGCCATGTTTTACTaGAAGCAGAGTGCTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: FLQAKSLQPPSGQLIRVKHAMFY*KQSAFL Trigger: GAGAAAAGCACTCTGCTTTCAGTAAAACATGGCATG...CTTTACTCTGATCAGCTGCCCTGAAGGGGGCTGCAGGCTCTTAGCCTGCAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGATGTTATACTCAGAGAGGGTACAGAAGACAGCGAGACACCTCTGGTCCAGGGGTAAGTGTCCTTaGCTCATGTGTTGCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CKMLYSERVQKTARHLWSRGKCP*LMCCCC Trigger: GCAACAGCAACACATGAGTCAAGGACACTTACCCCT...GGACCAGAGGTGTCTCGCTGTCTTCTGTACCCTCTCTGAGTATAACATCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCACATTCAGGGGACAAGCGCTCTGTATAAATGGGGCCTGGCACCAATTAGGTTTCCCTGTAACATaGAACACAAATCACGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSTFRGQALCINGAWHQLGFPVT*NTNHEQ Trigger: CTGCTCGTGATTTGTGTTCCATGTTACAGGGAAACC...TAATTGGTGCCAGGCCCCATTTATACAGAGCGCTTGTCCCCTGAATGTGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACCCTGATTCAAGCTCTGGGAACTGAAGCCACATTCTaGACAAGGCATCAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: TGKNILFLGFWTLIQALGTEATF*TRHQST Trigger: TGTGCTCTGATGCCTTGTTCAGAATGTGGCTTCAGT...TCCCAGAGCTTGAATCAGGGTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR TCA 90 bp | CTTATGAACAGTGAGAGTCATTGGTCCTCCAGGCTCTGGGTGACAACTATCAGCACACTGGAGATGGTATaGTCATCTCCATGCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LMNSESHWSSRLWVTTISTLEMV*SSPCKM Trigger: CATCTTGCATGGAGATGATCATACCATCTCCAGTGT...GCTGATAGTTGTCACCCAGAGCCTGGAGGACCAATGACTCTCACTGTTCATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 72 bp | GTTCAGGAGTTTGCAGCCTATGCTGTGCACCCACCCTaGCCAGTGGCACCCCTTCTCAGTCTCTGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: VQEFAAYAVHPP*PVAPLLSLWLL Trigger: CAGAAGCCAGAGACTGAGAAGGGGTGCCACTGGCCAGGGTGGGTGCACAGCATAGGCTGCAAACTCCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 72 bp | GTCTGGCACTGGAAACAGACGGAGGGACAGAGATCCTaGGTAGGCAAGAGGAATACCAGGGGAGGCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VWHWKQTEGQRS*VGKRNTRGGSW Trigger: CCAGCTGCCTCCCCTGGTATTCCTCTTGCCTACCCAGGATCTCTGTCCCTCCGTCTGTTTCCAGTGCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR TCA 72 bp | GAGGGTAGCCACGTGTCAGGCCCGCCTTATGAACAGTaGGAGTCATTGGTCCTCCAGGCTCTGGGTGACAAC | + |
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Preference number: 3 (lower is better) Translates to: EGSHVSGPPYEQ*ESLVLQALGDN Trigger: GTTGTCACCCAGAGCCTGGAGGACCAATGACTCTCACTGTTCATAAGGCGGGCCTGACACGTGGCTACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR TCA 72 bp | CTCAGCCGCCCCAGGCTTAACTGTCTTGCTACAGGGTaGTCTGACACTTTCCTCCACAGTGGCGAGGATCGA | + |
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Preference number: 3 (lower is better) Translates to: LSRPRLNCLATG*SDTFLHSGEDR Trigger: TCGATCCTCGCCACTGTGGAGGAAAGTGTCAGATCACCCTGTAGCAAGACAGTTAAGCCTGGGGCGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 72 bp | TTGACTCATGTGTTGCTGTTGCCCACAGTCTGGCACTaGAAACAGACGGAGGGACAGAGATCCTGGGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: LTHVLLLPTVWH*KQTEGQRSWVG Trigger: GCCTACCCAGGATCTCTGTCCCTCCGTCTGTTTCCAGTGCCAGACTGTGGGCAACAGCAACACATGAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CAA 90 bp | CAAACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGCCTGATTTGCCCATCTaGTGGCTCTGTGGAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: QTQHAGENRKEHPVPRILPDLPI*WLCGEG Trigger: CCCCTCTCCACAGAGCCACAAGATGGGCAAATCAGG...CAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACGACACCTCTGGTCCTTaGGGTGTGACCTCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: TQHAGENRKEHPVPRILDDTSGP*GVTSLK Trigger: CTTCAGTGAGGTCACACCCAAAGGACCAGAGGTGTC...GTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 72 bp | GGACAAAGCCCTTTGGGCTTTAAACGCCCATCCCACTaGCACTTCAGGTCCCAGAATCACTGCCTTCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: GQSPLGFKRPSH*HFRSQNHCLPS Trigger: ACTAGGAAGGCAGTGATTCTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 72 bp | CTTATGAACAGTGAGAGTCATTGGTCCTCCAGGCTCTaGGTGACAACTATCAGCCCCAAGCTAGGGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: LMNSESHWSSRL*VTTISPKLGSQ Trigger: CTGTGACCCTAGCTTGGGGCTGATAGTTGTCACCCAGAGCCTGGAGGACCAATGACTCTCACTGTTCATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CAA 90 bp | CTTATGAACAGTGAGAGTCATTGGTCCTCCAGGCTCTGGGTGACAACTATCAGCACTCATGTGTTGCTGTaGCCCACAGTCTGGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: LMNSESHWSSRLWVTTISTHVLL*PTVWHW Trigger: CCAGTGCCAGACTGTGGGCAACAGCAACACATGAGT...GCTGATAGTTGTCACCCAGAGCCTGGAGGACCAATGACTCTCACTGTTCATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CAA 90 bp | CCACTGACTCATACATTCAGAAGGTCCCTGATTTGCCCATCTTGTGGCTCTGTGCACAAGTTCAGGAGTTaGCAGCCTATGCTGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: PLTHTFRRSLICPSCGSVHKFRS*QPMLCT Trigger: GGTGCACAGCATAGGCTGCAAACTCCTGAACTTGTG...CACAGAGCCACAAGATGGGCAAATCAGGGACCTTCTGAATGTATGAGTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR TCA 72 bp | GCATTTAAAATCTGCACCAGAGCTCAGTGTAGCAGCTaGCACAGTTCTGATGAGGGTAGCCACGTGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: AFKICTRAQCSS*HSSDEGSHVSG Trigger: GCCTGACACGTGGCTACCCTCATCAGAACTGTGTCAGCTGCTACACTGAGCTCTGGTGCAGATTTTAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 72 bp | CAATTTCCTACGTGCCAAGGTAACGGGTCAGTACCATaGCTAGTTACTATGGCTCTTTTGGGACACAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: QFPTCQGNGSVP*LVTMALLGHSS Trigger: GGAGCTGTGTCCCAAAAGAGCCATAGTAACTAGGCATGGTACTGACCCGTTACCTTGGCACGTAGGAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR GCA 72 bp | TGTCCACTGACTCATACATTCAGAAGGTCCCTGATTTaGCCATCTTGTGGCTCTGTGGAGAGGGGTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: CPLTHTFRRSLI*PSCGSVERGKC Trigger: ACACTTACCCCTCTCCACAGAGCCACAAGATGGGCAAATCAGGGACCTTCTGAATGTATGAGTCAGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CCA 72 bp | AGGCAGCACATTCAGGGGACAAGCGCTCTGTATAAATaGGGCCTGGCACCAATTAGTACAATTTCCTACGTG | + |
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Preference number: 3 (lower is better) Translates to: RQHIQGTSALYK*GLAPISTISYV Trigger: CACGTAGGAAATTGTACTAATTGGTGCCAGGCCCCATTTATACAGAGCGCTTGTCCCCTGAATGTGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACCCTGATTCAAGCTCTGGGAGTTACTATGGCTCTTTaGGGACACAGCTCCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: TGKNILFLGFWTLIQALGVTMAL*GHSSFT Trigger: TGTGAAGGAGCTGTGTCCCAAAAGAGCCATAGTAAC...TCCCAGAGCTTGAATCAGGGTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR TCA 90 bp | CTTCTCAGTCTCTGGCTTCTGCACTGCCTGAGGAGGGGCTGTGCTGTGGTGGGAGGCCACAGGGGTGAGTaGGGCACTGAAGCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLSLWLLHCLRRGCAVVGGHRGE*GTEAPG Trigger: CCCTGGAGCTTCAGTGCCTCACTCACCCCTGTGGCC...TCCCACCACAGCACAGCCCCTCCTCAGGCAGTGCAGAAGCCAGAGACTGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR TCA 90 bp | GGACAAAGCCCTTTGGGCTTTAAACGCCCATCCCACTGCCACTTCAGGTCCCAGGAATGGCCTCCGTGCTaGGGGCCAGAGGGATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GQSPLGFKRPSHCHFRSQEWPPC*GPEGWR Trigger: ACGCCATCCCTCTGGCCCTCAGCACGGAGGCCATTC...CTGGGACCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 72 bp | ATACCAGGGGAGGCAGCTGGGAGGGGACAAAGCCCTTaGGGCTTTAAACGCCCATCCCACTGCCACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IPGEAAGRGQSP*GFKRPSHCHFR Trigger: CCTGAAGTGGCAGTGGGATGGGCGTTTAAAGCCCAAAGGGCTTTGTCCCCTCCCAGCTGCCTCCCCTGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR GCA 90 bp | GGTCACAGGCAGGACACTCAAAAGCACCAGACGTACAAACCCAGCACGCTGGGGAGGCTGATGCTGCAGTaGGTGGCCAGGATGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: GHRQDTQKHQTYKPSTLGRLMLQ*VARMVK Trigger: CTTTACCATCCTGGCCACGCACTGCAGCATCAGCCT...CCCCAGCGTGCTGGGTTTGTACGTCTGGTGCTTTTGAGTGTCCTGCCTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CCA 90 bp | GCTAGGGTCACAGGCAGGACACTCAAAAGCACCAGACGTACAAACCCAGCACGCAGCTTGTTGAAGGCCTaGCTGCGGAACTGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ARVTGRTLKSTRRTNPARSLLKA*LRNCLS Trigger: TGAGAGGCAGTTCCGCAGCCAGGCCTTCAACAAGCT...GCGTGCTGGGTTTGTACGTCTGGTGCTTTTGAGTGTCCTGCCTGTGACCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR GCA 90 bp | TGCAAGATGTTATACTCAGAGAGGGTACAGAAGACAGCGAGACACCTCTGGTCCGGTGAGCAGGGGCAGTaGCAGGCTGATGCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CKMLYSERVQKTARHLWSGEQGQ*QADAAV Trigger: CACTGCAGCATCAGCCTGGCACTGCCCCTGCTCACC...GGACCAGAGGTGTCTCGCTGTCTTCTGTACCCTCTCTGAGTATAACATCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR TCA 90 bp | CTTTTGGGACACAGCTCCTTCACAAACTGTCAGGGCATTCTGTCTAGGACAAGGTCTGGGGCAGCTTGTTaGAGGCCTGGCTGCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LLGHSSFTNCQGILSRTRSGAAC*RPGCGT Trigger: AGTTCCGCAGCCAGGCCTTCAACAAGCTGCCCCAGA...CCTTGTCCTAGACAGAATGCCCTGACAGTTTGTGAAGGAGCTGTGTCCCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR GCA 90 bp | ACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACCCTGATTCAAGCTCTGGGATCTGGGCAGGCTGCCTaGTGGTGCCAGGATGATGCC | + |
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Preference number: 4 (lower is better) Translates to: TGKNILFLGFWTLIQALGSGQAA*WCQDDA Trigger: GGCATCATCCTGGCACCAGCAGGCAGCCTGCCCAGA...TCCCAGAGCTTGAATCAGGGTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CCA 90 bp | ACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACAACCCAACAACAGCCTaGGATCCAGGACACCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TQHAGENRKEHPVPRILDNPTTA*DPGHPE Trigger: CTCAGGGTGTCCTGGATCCCAGGCTGTTGTTGGGTT...GTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CCA 90 bp | CAAACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGAGCTTGGCTGTCCTCTaGGGCAGCTTGTTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QTQHAGENRKEHPVPRILSLAVL*GSLLKA Trigger: GGCCTTCAACAAGCTGCCCCAGAGGACAGCCAAGCT...CAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CCA 90 bp | CAAACCCAGCACGCTGGGGAGAACAGGAAAGAACATCCTGTTCCTAGGATTCTGCTGGTGTTGTTGGAATaGAGAATGGCCTCCGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QTQHAGENRKEHPVPRILLVLLE*RMASVL Trigger: CAGCACGGAGGCCATTCTCCATTCCAACAACACCAG...CAGAATCCTAGGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 72 bp | TTTAGGAAGATAATCCCAACACACAAGTTCAGGAGTTaGCAGCCTATGCTGTGCACCCACCCTGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FRKIIPTHKFRS*QPMLCTHPGQW Trigger: CCACTGGCCAGGGTGGGTGCACAGCATAGGCTGCAAACTCCTGAACTTGTGTGTTGGGATTATCTTCCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR TCA 90 bp | AACTGTCAGGGCATTCTGTCTAGGACAAGGGGGAGATGGACTTTCCATCCTAAACCAGGGCCACATACTTaGATCCAATTCCTCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NCQGILSRTRGRWTFHPKPGPHT*IQFLLC Trigger: ACACAGGAGGAATTGGATTCAAGTATGTGGCCCTGG...TTTAGGATGGAAAGTCCATCTCCCCCTTGTCCTAGACAGAATGCCCTGACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| 3UTR CAA 72 bp | AACGGGTCAGTACCATGCCTAGTTACTATGGCTCTTTaGGGACACAGCTCCTTCACAAACTGTCAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: NGSVPCLVTMAL*GHSSFTNCQGI Trigger: AATGCCCTGACAGTTTGTGAAGGAGCTGTGTCCCAAAAGAGCCATAGTAACTAGGCATGGTACTGACCCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR GCA 90 bp | CCACTGACTCATACATTCAGAAGGTCCCTGATTTGCCCATCTTGTGGCTCTGTGCTTGGCTGTCTCTCCTaGCAGGATATTAATCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PLTHTFRRSLICPSCGSVLGCLS*QDINLL Trigger: GAGAAGATTAATATCCTGGCAGGAGAGACAGCCAAG...CACAGAGCCACAAGATGGGCAAATCAGGGACCTTCTGAATGTATGAGTCAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR GCA 90 bp | AACAGTGAGAGTCATTGGTCCTCCAGGCTCTGGGTGACAACTATCAGCCCCAAGTCTTTTTGTGGTCAATaGCCTTGGAAAAGTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: NSESHWSSRLWVTTISPKSFCGQ*PWKSHS Trigger: ACTATGACTTTTCCAAGGGCATTGACCACAAAAAGA...CTTGGGGCTGATAGTTGTCACCCAGAGCCTGGAGGACCAATGACTCTCACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CCA 90 bp | CAGAAACATCTGAACCACCAACTACACAAAAAGCCAGGAGCACTCCTTGCTAATCAGATTCCATGTCCCTaGTGTTGTTGGAATGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: QKHLNHQLHKKPGALLANQIPCP*CCWNGE Trigger: TTCTCCATTCCAACAACACCAGGGACATGGAATCTG...ATTAGCAAGGAGTGCTCCTGGCTTTTTGTGTAGTTGGTGGTTCAGATGTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | GGTCACAGGCAGGACACTCAAAAGCACCAGACGTACAAACCCAGCACGCTGGGGGTCCTCTGGGGCAGCTaGTTGAAGGCCTGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GHRQDTQKHQTYKPSTLGVLWGS*LKAWLR Trigger: CCGCAGCCAGGCCTTCAACAAGCTGCCCCAGAGGAC...CCCCAGCGTGCTGGGTTTGTACGTCTGGTGCTTTTGAGTGTCCTGCCTGTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CCA 90 bp | AGGAGGTTGAGCTTGGCTGTCCTCTGGGGCAGCTTGTTGAAGGCCTaGCTGCGGAACTGCCTCTCAAGGGAGAAGGCCATGGGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: RRLSLAVLWGSLLKA*LRNCLSREKAMGMV Trigger: CACCATCCCCATGGCCTTCTCCCTTGAGAGGCAGTTCCGCAGCCAGGCCTTCAACAAGCTGCCCCAGAGGACAGCCAAGCTCAACCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | AACTGTCAGGGCATTCTGTCTAGGACAAGGGGGAGATGGACTTTCCATCCTAAATGCGGGTCCCCGACCTaGGCTGTCTCTCCTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NCQGILSRTRGRWTFHPKCGSPT*AVSPAR Trigger: CCTGGCAGGAGAGACAGCCAAGGTCGGGGACCCGCA...TTTAGGATGGAAAGTCCATCTCCCCCTTGTCCTAGACAGAATGCCCTGACAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | CTTCTCAGTCTCTGGCTTCTGCACTGCCTGAGGAGGGGCTGTGCTGTGGTGGGACTGTCATCACTCTTTTaGTGGTCAATGCCCTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LLSLWLLHCLRRGCAVVGLSSLF*WSMPLE Trigger: TTCCAAGGGCATTGACCACAAAAAGAGTGATGACAG...TCCCACCACAGCACAGCCCCTCCTCAGGCAGTGCAGAAGCCAGAGACTGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | GGCAGCACATTCAGGGGACAAGCGCTCTGTATAAATGGGGCCTGGCACCAATTATCCATGTCCCTGGTGTaGTTGGAATGGAGAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: GSTFRGQALCINGAWHQLSMSLV*LEWRMA Trigger: GGCCATTCTCCATTCCAACAACACCAGGGACATGGA...TAATTGGTGCCAGGCCCCATTTATACAGAGCGCTTGTCCCCTGAATGTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS TCA 90 bp | TTCCTCCTGTGTAGAGAAAGGAGCCAGACAGGCCTCCGAAGTAGATaGGAGCCAAGTGTTCCAATTTCAGAGCGGACAGGTAGTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: FLLCRERSQTGLRSR*EPSVPISERTGSRG Trigger: GCCTCTACTACCTGTCCGCTCTGAAATTGGAACACTTGGCTCTCATCTACTTCGGAGGCCTGTCTGGCTCCTTTCTCTACACAGGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | ACAGGAAAGAACATCCTGTTCCTAGGATTCTGGACCCTGATTCAAGCTCTGGGATATGTGTTGACCAAATaGCCGGCCCCGTGTACAGCC | + |
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Preference number: 5 (lower is better) Translates to: TGKNILFLGFWTLIQALGYVLTK*PAPCTA Trigger: GGCTGTACACGGGGCCGGCAATTTGGTCAACACATA...TCCCAGAGCTTGAATCAGGGTCCAGAATCCTAGGAACAGGATGTTCTTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS-3UTR CAA 90 bp | TGCAAGATGTTATACTCAGAGAGGGTACAGAAGACAGCGAGACACCTCTGGTCCATGTCCCTGGTGTTGTaGGAATGGAGAATGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CKMLYSERVQKTARHLWSMSLVL*EWRMAS Trigger: GGAGGCCATTCTCCATTCCAACAACACCAGGGACAT...GGACCAGAGGTGTCTCGCTGTCTTCTGTACCCTCTCTGAGTATAACATCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS GCA 72 bp | TCGGGAAGCCTGTCCTGCTCGGGCCATTCGTTCTTCTaGGGGTCCCCGACCTTGGCTGTCTCTCCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGSLSCSGHSFF*GSPTLAVSPAR Trigger: CCTGGCAGGAGAGACAGCCAAGGTCGGGGACCCGCAGAAGAACGAATGGCCCGAGCAGGACAGGCTTCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS GCA 72 bp | CACTTGTGCCTCCAGGATCGTTCGGGAAGCCTGTCCTaGTCGGGCCATTCGTTCTTCTGCGGGTCCCCGACC | + |
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Preference number: 6 (lower is better) Translates to: HLCLQDRSGSLS*SGHSFFCGSPT Trigger: GGTCGGGGACCCGCAGAAGAACGAATGGCCCGAGCAGGACAGGCTTCCCGAACGATCCTGGAGGCACAAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS GCA 72 bp | CTCTGGGGCAGCTTGTTGAAGGCCTGGCTGCGGAACTaGCTCTCAAGGGAGAAGGCCATGGGGATGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LWGSLLKAWLRN*LSREKAMGMVS Trigger: GCTCACCATCCCCATGGCCTTCTCCCTTGAGAGGCAGTTCCGCAGCCAGGCCTTCAACAAGCTGCCCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CCA 72 bp | AGCTTGGCTGTCCTCTGGGGCAGCTTGTTGAAGGCCTaGCTGCGGAACTGCCTCTCAAGGGAGAAGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: SLAVLWGSLLKA*LRNCLSREKAM Trigger: CATGGCCTTCTCCCTTGAGAGGCAGTTCCGCAGCCAGGCCTTCAACAAGCTGCCCCAGAGGACAGCCAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CAA 90 bp | GTGACGATGCCAGCCTCTCGGTCAGATTCCATGTCCCTGGTGTTGTaGGAATGGAGAATGGCCTCCGTGCTGAGGGCCAGAGGGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: VTMPASRSDSMSLVL*EWRMASVLRARGMA Trigger: CGCCATCCCTCTGGCCCTCAGCACGGAGGCCATTCTCCATTCCAACAACACCAGGGACATGGAATCTGACCGAGAGGCTGGCATCGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CAA 90 bp | AGCGTGACGATGCCAGCCTCTCGGTCAGATTCCATGTCCCTGGTGTaGTTGGAATGGAGAATGGCCTCCGTGCTGAGGGCCAGAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: SVTMPASRSDSMSLV*LEWRMASVLRARGM Trigger: CATCCCTCTGGCCCTCAGCACGGAGGCCATTCTCCATTCCAACAACACCAGGGACATGGAATCTGACCGAGAGGCTGGCATCGTCACGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CAA 72 bp | CCAGCCTCTCGGTCAGATTCCATGTCCCTGGTGTTGTaGGAATGGAGAATGGCCTCCGTGCTGAGGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PASRSDSMSLVL*EWRMASVLRAR Trigger: TCTGGCCCTCAGCACGGAGGCCATTCTCCATTCCAACAACACCAGGGACATGGAATCTGACCGAGAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS CAA 72 bp | ATGCCAGCCTCTCGGTCAGATTCCATGTCCCTGGTGTaGTTGGAATGGAGAATGGCCTCCGTGCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: MPASRSDSMSLV*LEWRMASVLRA Trigger: GGCCCTCAGCACGGAGGCCATTCTCCATTCCAACAACACCAGGGACATGGAATCTGACCGAGAGGCTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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| CDS TCA 72 bp | TGTGGTCAATGCCCTTGGAAAAGTCATAGTATGTGTTaGCCAAATTGCCGGCCCCGTGTACAGCCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: CGQCPWKSHSMC*PNCRPRVQPGQ Trigger: CTGTCCTGGCTGTACACGGGGCCGGCAATTTGGTCAACACATACTATGACTTTTCCAAGGGCATTGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051633.3 |
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