Pregenerated sensors for UBE3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039000Ensembl transcript IDs: ENSMUST00000049453.9, ENSMUST00000199032.2
Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAATTAGAAAGGGAGAGATGCCAGATAGAAGGCCTGAGGAGAGCTaGGGGTCCTGCCTGAGTGCTCTCTTGGGTCTGGTAGGTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: KIRKGEMPDRRPEES*GSCLSALLGLVGAG Trigger: GCCAGCACCTACCAGACCCAAGAGAGCACTCAGGCAGGACCCTCAGCTCTCCTCAGGCCTTCTATCTGGCATCTCTCCCTTTCTAATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 90 bp | CCTGGAAAGCTTTCCAGGCATAAAGCAGAGACAGGCAAAGAGCAATaGGGGCAGCAGTCACCTCAACCCACACAGCCATGTCCAAACCTC | + |
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Preference number: 1 (lower is better) Translates to: PGKLSRHKAETGKEQ*GQQSPQPTQPCPNL Trigger: GAGGTTTGGACATGGCTGTGTGGGTTGAGGTGACTGCTGCCCTCATTGCTCTTTGCCTGTCTCTGCTTTATGCCTGGAAAGCTTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 90 bp | ACAAGTTTGACCCTGATAAAGTGCCCAAGTGAGAATCACCTGGCCTaGTGCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCA | + |
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Preference number: 1 (lower is better) Translates to: TSLTLIKCPSENHLA*CSSLADARDAVFLS Trigger: TGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGCATCAGGCCAGGTGATTCTCACTTGGGCACTTTATCAGGGTCAAACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR GCA 90 bp | ATCCATCTGGCCCTGGAGCTGTTCACTTTGCAAGACCTGACCATATaGAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAACT | + |
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Preference number: 1 (lower is better) Translates to: IHLALELFTLQDLTI*KFCQWVELKVSGST Trigger: AGTTGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTGCAAAGTGAACAGCTCCAGGGCCAGATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR TCA 90 bp | TGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAACTTaGAGATCGCTTGTCCCTGAAGACATAGACATACCTCCAATGTCC | + |
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Preference number: 1 (lower is better) Translates to: CKFCQWVELKVSGST*RSLVPEDIDIPPMS Trigger: GGACATTGGAGGTATGTCTATGTCTTCAGGGACAAGCGATCTTCAAGTTGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR GCA 90 bp | GACATACCTCCAATGTCCTGCCACATTCCTGTCCTGGATTCTTGGTaGACCCGTATCCCTGTCTCATATCTGACTGTCTTTTACTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: DIPPMSCHIPVLDSW*TRIPVSYLTVFYSQ Trigger: TTGAGAGTAAAAGACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGGAGGTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR CCA 90 bp | ATAGACATACCTCCAATGTCCTGCCACATTCCTGTCCTGGATTCTTaGTGCACCCGTATCCCTGTCTCATATCTGACTGTCTTTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: IDIPPMSCHIPVLDS*CTRIPVSYLTVFYS Trigger: AGAGTAAAAGACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGGAGGTATGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR CCA 90 bp | TTCTGTATGCAGATACTGGTGCCTGACCCAAGAAGGGATATAAACTaGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: FCMQILVPDPRRDIN*VSKAKASSLVNFTE Trigger: CTCAGTGAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCTTGGGTCAGGCACCAGTATCTGCATACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CCA 90 bp | GCTATTTTCAGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTaGAAGGAAGGGTTCTTAGGAGTCCCTAACCTTTCTTCATACATC | + |
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Preference number: 1 (lower is better) Translates to: AIFSVTQSSLDNVHA*KEGFLGVPNLSSYI Trigger: GATGTATGAAGAAAGGTTAGGGACTCCTAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAAAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR GCA 90 bp | GGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCACTGAGTTaGCACTATTCTAAAACCTGTGCTCTTCTTGGCAAAATTACTAAA | + |
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Preference number: 1 (lower is better) Translates to: GSARPKLHLWLISLS*HYSKTCALLGKITK Trigger: TTTAGTAATTTTGCCAAGAAGAGCACAGGTTTTAGAATAGTGGCAACTCAGTGAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCACAGGCAAAGAGCAATaGGGGCAGCAGTCACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: DGHSQARRAYGSRRDAARTGKEQ*GQQSPQ Trigger: TTGAGGTGACTGCTGCCCTCATTGCTCTTTGCCTGT...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR TCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCAGGCCTGAGGAGAGCTaGGGGTCCTGCCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ANSVHLTPTAQRASRHRCRPEES*GSCLSA Trigger: AGCACTCAGGCAGGACCCTCAGCTCTCCTCAGGCCT...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CAA 90 bp | AGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCCACTTaGGTTCAAATGACTTTAATAAAAGCTGCAGTGCCCACATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: RLGGHMDHGETQPAT*VQMTLIKAAVPTSP Trigger: TGGGGATGTGGGCACTGCAGCTTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCACATGCGATTCCCACCTaGGGGACATGGCTTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LQQHKEPPGTDAGLRREAHAIPT*GTWLKK Trigger: CTTTTTAAGCCATGTCCCCCAGGTGGGAATCGCATG...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR GCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCCTGGTAGGTGCTGGCTaGCTTTGGGTGAGATCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ANSVHLTPTAQRASRHRCLVGAG*LWVRSS Trigger: ACTTGATCTCACCCAAAGGCAGCCAGCACCTACCAG...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCATTAGAAAGGGAGAGATaGCAGATAGAAGGCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LQQHKEPPGTDAGLRREALERER*QIEGLR Trigger: CCTCAGGCCTTCTATCTGGCATCTCTCCCTTTCTAA...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR CCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCCAAGTGAGAATCACCTaGCCTGATGCTCTTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ANSVHLTPTAQRASRHRCQVRIT*PDALPW Trigger: CCAGGGAAGAGCATCAGGCCAGGTGATTCTCACTTG...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCGCTGAGGGTCCTGCCTaGGTGCTCTCTTGGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RRDINWVSKAKASSLVNFAEGPA*VLSWVW Trigger: CCAGACCCAAGAGAGCACTCAGGCAGGACCCTCAGC...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR CCA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACCACATGAGAAGCAGTaGCTTGGCTCTGTGTATCAG | + |
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Preference number: 2 (lower is better) Translates to: LIKAAVPTSPVANSLQVTPHEKQ*LGSVYQ Trigger: CTGATACACAGAGCCAAGCCACTGCTTCTCATGTGG...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CAA 90 bp | AAAAAGTTCCTTAGAGTCATCCATCTGGCCCTGGAGCTGTTCACTTaGCAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KKFLRVIHLALELFT*QDLTICKFCQWVEL Trigger: CAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTGCAAAGTGAACAGCTCCAGGGCCAGATGGATGACTCTAAGGAACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR CAA 90 bp | ATGAGGCCAGGCCATGCAGCTATTTTCAGTGTTACTCAGAGTTCCTaGGACAATGTACATGCCTGGAAGGAAGGGTTCTTAGGAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: MRPGHAAIFSVTQSS*DNVHAWKEGFLGVP Trigger: AGGGACTCCTAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAAAATAGCTGCATGGCCTGGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR CAA 90 bp | CATAGACATACCTCCAATGTCCTGCCACATTCCTGTCCTGGATTCTaGGTGCACCCGTATCCCTGTCTCATATCTGACTGTCTTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: HRHTSNVLPHSCPGF*VHPYPCLISDCLLL Trigger: GAGTAAAAGACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGGAGGTATGTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCGACTTTAATAAAAGCTaGAGTGCCCACATCCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPDFNKS*SAHIPS Trigger: ACTGGGGATGTGGGCACTGCAGCTTTTATTAAAGTC...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCAGTCCATCTATGTATGTaGCTATGTCACGATAAAATC | + |
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Preference number: 2 (lower is better) Translates to: LQQHKEPPGTDAGLRREAVHLCM*LCHDKI Trigger: GATTTTATCGTGACATAGTCACATACATAGATGGAC...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAAGTATGCAGATACTGGTaGCTGACCCAAGAAGGGATA | + |
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Preference number: 2 (lower is better) Translates to: MDHGETQPATLVQMTLIKVCRYW*LTQEGI Trigger: TATCCCTTCTTGGGTCAGGCACCAGTATCTGCATAC...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR GCA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCACCATATGCAAATTCTaGCAGTGGGTGGAGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: HYCLDSLREACQMFTASFTICKF*QWVELK Trigger: CTTCAGCTCCACCCACTGGCAGAATTTGCATATGGT...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAATGTAGAGTTACTATATaGGGCCAGGCCATGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PEITKYDTHYVEEMHKQECRVTI*GQAMQL Trigger: TAGCTGCATGGCCTGGCCTCATATAGTAACTCTACA...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAATGCAAATTCTGCCAGTaGGTGGAGCTGAAGGTATCA | + |
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Preference number: 2 (lower is better) Translates to: PEITKYDTHYVEEMHKQECKFCQ*VELKVS Trigger: TGATACCTTCAGCTCCACCCACTGGCAGAATTTGCA...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAACGAAGGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCATCCCTGTCTCATATCTaGCTGTCTTTTACTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: FNEGTSFCLWSGMYPLLASLSHI*LSFTLK Trigger: TTTGAGAGTAAAAGACAGTCAGATATGAGACAGGGA...TGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACCTTCGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAAAGCCTTAGAGAGGCATaGCAAATGTTTACTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PEITKYDTHYVEEMHKQESLREA*QMFTAS Trigger: AGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCT...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACACTCTTCCTGGTGATCTGGAAGATTAAGTCTGTTTTAGGTTCAAATTTTGGTTTCACTACAACCTaGGGCAATAACAGTATAATC | + |
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Preference number: 2 (lower is better) Translates to: CTLFLVIWKIKSVLGSNFGFTTT*GNNSII Trigger: GATTATACTGTTATTGCCTCAGGTTGTAGTGAAACC...AAAATTTGAACCTAAAACAGACTTAATCTTCCAGATCACCAGGAAGAGTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR CCA 72 bp | GTCCTGCCTGAGTGCTCTCTTGGGTCTGGTAGGTGCTaGCTGCCTTTGGGTGAGATCAAGTTCTCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VLPECSLGSGRC*LPLGEIKFSGL Trigger: GAGCCCAGAGAACTTGATCTCACCCAAAGGCAGCCAGCACCTACCAGACCCAAGAGAGCACTCAGGCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 72 bp | AAGGGAGAGATGCCAGATAGAAGGCCTGAGGAGAGCTaGGGGTCCTGCCTGAGTGCTCTCTTGGGTCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: KGEMPDRRPEES*GSCLSALLGLV Trigger: TACCAGACCCAAGAGAGCACTCAGGCAGGACCCTCAGCTCTCCTCAGGCCTTCTATCTGGCATCTCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 72 bp | CAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTaGCACGGTACCTCAGGAAGTGTAAGGACCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: QCPHPQLPTHCR*HGTSGSVRTLL Trigger: GAGAAGGGTCCTTACACTTCCTGAGGTACCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR GCA 72 bp | CCTGGCCTGATGCTCTTCCCTGGCAGATGCCAGGGATaGTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PGLMLFPGRCQG*CLLIKTAAESR Trigger: TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGCATCAGGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CCA 72 bp | GCCCAAGTGAGAATCACCTGGCCTGATGCTCTTCCCTaGCAGATGCCAGGGATGCTGTCTTCTTATCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: AQVRITWPDALP*QMPGMLSSYQD Trigger: GTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGCATCAGGCCAGGTGATTCTCACTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 72 bp | CTTTCCAGGCATAAAGCAGAGACAGGCAAAGAGCAATaGGGGCAGCAGTCACCTCAACCCACACAGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: LSRHKAETGKEQ*GQQSPQPTQPC Trigger: ACATGGCTGTGTGGGTTGAGGTGACTGCTGCCCTCATTGCTCTTTGCCTGTCTCTGCTTTATGCCTGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CCA 72 bp | CCTCCAATGTCCTGCCACATTCCTGTCCTGGATTCTTaGTGCACCCGTATCCCTGTCTCATATCTGACTGTC | + |
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Preference number: 3 (lower is better) Translates to: PPMSCHIPVLDS*CTRIPVSYLTV Trigger: GACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR CAA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGACGCAGCCCGCCACTTaGGTTCAAATGACTTTAATA | + |
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Preference number: 3 (lower is better) Translates to: GCCLLIKTAAESRGAEAWTQPAT*VQMTLI Trigger: TATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGT...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR-3UTR CAA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCGCTTCCCTGCTTTGTTaGCAGAGGCTGAGGTCAACT | + |
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Preference number: 3 (lower is better) Translates to: ANSVHLTPTAQRASRHRCASLLC*QRLRST Trigger: AGTTGACCTCAGCCTCTGCAAACAAAGCAGGGAAGC...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR GCA 72 bp | GCCCTGGAGCTGTTCACTTTGCAAGACCTGACCATATaGAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCA | + |
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Preference number: 3 (lower is better) Translates to: ALELFTLQDLTI*KFCQWVELKVS Trigger: TGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTGCAAAGTGAACAGCTCCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR TCA 72 bp | TATCAGCCCCAGATTCTGTATGCAGATACTGGTGCCTaGCCCAAGAAGGGATATAAACTGGGTCAGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: YQPQILYADTGA*PKKGYKLGQQG Trigger: GCCTTGCTGACCCAGTTTATATCCCTTCTTGGGTCAGGCACCAGTATCTGCATACAGAATCTGGGGCTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR GCA 72 bp | CCAATGTCCTGCCACATTCCTGTCCTGGATTCTTGGTaGACCCGTATCCCTGTCTCATATCTGACTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: PMSCHIPVLDSW*TRIPVSYLTVF Trigger: AAAGACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCCCAAACCTAACCACTTaGGGAAAAGGCAGCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ANSVHLTPTAQRASRHRCPNLTT*GKGSRK Trigger: TTTCCTGCTGCCTTTTCCCAAAGTGGTTAGGTTTGG...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR TCA 72 bp | TGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAACTTaGAGATCGCTTGTCCCTGAAGACATAGACATACCT | + |
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Preference number: 3 (lower is better) Translates to: CQWVELKVSGST*RSLVPEDIDIP Trigger: AGGTATGTCTATGTCTTCAGGGACAAGCGATCTTCAAGTTGAACCTGATACCTTCAGCTCCACCCACTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR GCA 72 bp | CTGTTCACTTTGCAAGACCTGACCATATGCAAATTCTaGCAGTGGGTGGAGCTGAAGGTATCAGGTTCAACT | + |
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Preference number: 3 (lower is better) Translates to: LFTLQDLTICKF*QWVELKVSGST Trigger: AGTTGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTGCAAAGTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
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| 3UTR-3UTR CAA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACAAAACCTGTGCTCTTCTaGGCAAAATTACTAAACCAG | + |
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Preference number: 3 (lower is better) Translates to: LIKAAVPTSPVANSLQVTKPVLF*AKLLNQ Trigger: CTGGTTTAGTAATTTTGCCAAGAAGAGCACAGGTTT...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| 3UTR CCA 72 bp | CAGATACTGGTGCCTGACCCAAGAAGGGATATAAACTaGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QILVPDPRRDIN*VSKAKASSLVN Trigger: ATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCTTGGGTCAGGCACCAGTATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| 3UTR CCA 72 bp | AGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTaGAAGGAAGGGTTCTTAGGAGTCCCTAACCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVTQSSLDNVHA*KEGFLGVPNLS Trigger: AGAAAGGTTAGGGACTCCTAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| 3UTR GCA 72 bp | AAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTaGAGGCTCAATGTGTATGGTGAAATGTTACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLLFMVWNVPIT*RLNVYGEMLHP Trigger: AGGGTGTAACATTTCACCATACACATTGAGCCTGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| 3UTR GCA 72 bp | AGATATCACTACTGTCTAGATAGCCTTAGAGAGGCATaGCAAATGTTTACTGCTTCTTTCAAGAAAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RYHYCLDSLREA*QMFTASFKKSF Trigger: GAAACTTTTCTTGAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTGATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCCTAGGCTCACAACATTaGCCAGGCCCTGGCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DGHSQARRAYGSRRDAARLGSQH*PGPGGK Trigger: CTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAG...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGACCAGGCCATGGGCATTaGGCAAGTGCACCCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRPGHGH*ASAPGS Trigger: GGATCCGGGTGCACTTGCTCAATGCCCATGGCCTGG...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCCAGCAGCACACTCAATaGCATACAGCAGCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGHSQARRAYGSRRDAARQQHTQ*HTAACF Trigger: GAAGCAAGCTGCTGTATGCCATTGAGTGTGCTGCTG...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCAATCTTCAAAAGACATaGGCGAACCCCGCGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: DGHSQARRAYGSRRDAARNLQKT*ANPAIS Trigger: TGATATCGCGGGGTTCGCCCATGTCTTTTGAAGATT...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGTCTCCCACAAGCATCTaGGCAGCTGGGTTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GCCLLIKTAAESRGAEAWSPTSI*AAGLGY Trigger: ATACCCCAACCCAGCTGCTCAGATGCTTGTGGGAGA...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGACCTTTTCTTCCTTCCTaGTCGCGCCACCGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRPFLPS*SRHRET Trigger: TGTCTCTCGGTGGCGCGAGCAGGAAGGAAGAAAAGG...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGACATCCTCAGGGCTGTTaGGTTGGTCAGTCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRHPQGC*VGQSPR Trigger: ACGAGGAGACTGACCAACCCAACAGCCCTGAGGATG...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCCAGGGTGGACTGCAGTaGGCCAATCCTGCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPQGGLQ*ANPAHP Trigger: AGGATGGGCAGGATTGGCCCACTGCAGTCCACCCTG...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAGCAGTTCTGTCAGGATaGCAAGCTGTCGTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRAVLSG*QAVVPQ Trigger: CTGAGGAACGACAGCTTGCCATCCTGACAGAACTGC...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACGGGATATCCTCTTGTTCTaGCAGCCAGTGGTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKAAVPTSPVANSLQVTRDILLF*QPVVWR Trigger: CCTCCAAACCACTGGCTGTCAGAACAAGAGGATATC...CCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGGGTTCAGCAGGGTGTTaGTTTGCTGCTTCGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCCLLIKTAAESRGAEAWGSAGC*FAASYP Trigger: TGGATACGAAGCAGCAAACCAACACCCTGCTGAACC...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCATCAGGCTCATTTTCTaGAGAAAGTTTGTCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGHSQARRAYGSRRDAARIRLIF*RKFVIS Trigger: GCTTATGACAAACTTTCTCCAGAAAATGAGCCTGAT...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGAAAACTTGATGCCTTaGGGCTTCAGGACAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRENLMP*GFRTGA Trigger: AGCTCCTGTCCTGAAGCCTCAAGGCATCAAGTTTTC...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAATGGAGATCAGCGAATaGCTGAACAAGGAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRMEISE*LNKELK Trigger: CTTCAGCTCCTTGTTCAGTCATTCGCTGATCTCCAT...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAAACCTCCAGGGTGGACTaGAGTGGGCCAATCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MDHGETQPATLVQMTLIKTSRVD*SGPILP Trigger: GGGCAGGATTGGCCCACTGCAGTCCACCCTGGAGGT...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | CATTCCTGTCCTGGATTCTTGGTGCACCCGTATCCCTGTCTCATATCTGACTGTCGTCCTCAGAGTCACTaGTGGAATCAGGACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSCPGFLVHPYPCLISDCRPQSH*WNQDSL Trigger: CAGGCTGTCCTGATTCCACCAGTGACTCTGAGGACG...ACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCAGTAATATATGGGGCTaGCACCCTGCCATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPSNIWG*HPAILR Trigger: CCTGAGGATGGCAGGGTGTCAGCCCCATATATTACT...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTAGTAATATATGGGGCTaGCACCCTGCCATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDLTICKFCQWVELKVSGSNIWG*HPAILR Trigger: CCTGAGGATGGCAGGGTGTCAGCCCCATATATTACT...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGACCCAATACTCTGAAATaGGGTGACATATTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRPNTLK*GDIFFP Trigger: CGGGAAGAATATGTCACCGCATTTCAGAGTATTGGG...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTACCACCACCATCGATaGCAGCTTCATCCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCYHHHR*QLHPGH Trigger: ATGGCCTGGATGAAGCTGGCATCGATGGTGGTGGTA...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCCCTCAGAGTCACTGGTaGAATCAGGACAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCPQSHW*NQDSLY Trigger: GTACAGGCTGTCCTGATTCCACCAGTGACTCTGAGG...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| 3UTR CAA 72 bp | ACCTCCAATGTCCTGCCACATTCCTGTCCTGGATTCTaGGTGCACCCGTATCCCTGTCTCATATCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNVLPHSCPGF*VHPYPCLISDC Trigger: ACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACATTGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTGAAAACTTGATGCCTTaGGGCTTCAGGACAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDLTICKFCQWVELKVSGENLMP*GFRTGA Trigger: AGCTCCTGTCCTGAAGCCTCAAGGCATCAAGTTTTC...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCCCCCGCGATATCAACTaGAGCAATGGCACCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCPRDIN*SNGTID Trigger: ATCTATGGTGCCATTGCTTCAGTTGATATCGCGGGG...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGATTAACTCCTCCAGAGTaGAAGGCATCATGGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRLTPPE*KASWMI Trigger: AATCATCCATGATGCCTTTCACTCTGGAGGAGTTAA...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAGTCTTTCTTCCTGAGTaGGATGTAAAAGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRVFLPE*DVKEKP Trigger: AGGCTTCTCTTTTACATCGCACTCAGGAAGAAAGAC...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCATCATCACTACAGTTTTaGAGCAACCTGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQHKEPPGTDAGLRREASSLQF*SNLQQR Trigger: CCTCTGTTGCAGGTTGCTGCAAAACTGTAGTGATGA...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAAGCAGGGTGTTGGTTTaGTGCTTCGTATCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRSRVLV*CFVSSF Trigger: AAAACTGGATACGAAGCAGCAAACCAACACCCTGCT...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGACTCAAGCATTCGCATTaGAAGTGCAACATTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRLKHSH*KCNIQT Trigger: AGTCTGAATGTTGCACTTCCAATGCGAATGCTTGAG...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTGGTTCAGCAGGGTGTTaGTTTGCTGCTTCGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDLTICKFCQWVELKVSGGSAGC*FAASYP Trigger: TGGATACGAAGCAGCAAACCAACACCCTGCTGAACC...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| 3UTR CAA 72 bp | CTTAGAGTCATCCATCTGGCCCTGGAGCTGTTCACTTaGCAAGACCTGACCATATGCAAATTCTGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVIHLALELFT*QDLTICKFCQW Trigger: CCACTGGCAGAATTTGCATATGGTCAGGTCTTGCAAAGTGAACAGCTCCAGGGCCAGATGGATGACTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACGGCTGCAAAGGCCGGAATaGCGAAATGAAAAATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKAAVPTSPVANSLQVTRLQRPE*RNEKFD Trigger: ATCAAATTTTTCATTTCGTCATTCCGGCCTTTGCAG...CCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACCACACATGTCTAGATaGAGGTACATAGAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIKAAVPTSPVANSLQVTPHMSR*RYIELG Trigger: ACCCAGCTCTATGTACCTGCATCTAGACATGTGTGG...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCCACTCGCTCCTCAAATaGAACCACAAAAGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPHSLLK*NHKRQF Trigger: GAACTGCCTTTTGTGGTTCCATTTGAGGAGCGAGTG...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCTTTAGTTCAACCACCTaGGCTTCTCCCAGGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPFSSTT*ASPRSL Trigger: CAATGACCTGGGAGAAGCCCAGGTGGTTGAACTAAA...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACGGTTCATCATAAAACTCTaGGAGCTTCAGCAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKAAVPTSPVANSLQVTRFIIKL*ELQQVH Trigger: ATGAACCTGCTGAAGCTCCCAGAGTTTTATGATGAA...CCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| 3UTR CAA 72 bp | TTGTATGCTAGCCTCTCAGATGCTTCCCTGCTTTGTTaGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYASLSDASLLC*QRLRSTGNKFD Trigger: GTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACAAAGCAGGGAAGCATCTGAGAGGCTAGCATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCAACGCGCTTCTTTGGATaGAGTATTGTTGTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQHKEPPGTDAGLRREATRFFG*SIVVFC Trigger: ACAGAAAACAACAATACTTCATCCAAAGAAGCGCGT...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCGAAAGGCATCATGGATaGTTGTCTCTGACCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCERHHG*LSLTYN Trigger: GTTGTAGGTCAGAGACAATCATCCATGATGCCTTTC...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACGGCCAGAAATTAATACCTaGATTTCCTGTTGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IKAAVPTSPVANSLQVTRPEINT*ISCWSN Trigger: GTTTGACCAACAGGAAATTCAGGTATTAATTTCTGG...CCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCCCTTTTCTTCCTTCCTaGTCGCGCCACCGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HYCLDSLREACQMFTASFPFLPS*SRHRET Trigger: TGTCTCTCGGTGGCGCGAGCAGGAAGGAAGAAAAGG...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCATCACTACAGTTTTaGAGCAACCTGCAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDLTICKFCQWVELKVSGSSLQF*SNLQQR Trigger: CCTCTGTTGCAGGTTGCTGCAAAACTGTAGTGATGA...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGGCTTCATCCAGGCCATaGGCATTGAGCAAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRASSRP*ALSKCT Trigger: GGTGCACTTGCTCAATGCCCATGGCCTGGATGAAGC...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTTGCGTCTTTCTTCCTaGGTGCGATGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCLRLSS*VRCKRE Trigger: TTCTCTTTTACATCGCACTCAGGAAGAAAGACGCAA...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGACACCGTTTTGAACTTTaGCTCTCAAGTAACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRHRFEL*LSSNNN Trigger: ATTGTTGTTACTTGAGAGTCAAAGTTCAAAACGGTG...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CATGCAGCTATTTTCAGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGCCCCGCGATATCAACTaGAGCAATGGCACCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HAAIFSVTQSSLDNVHAWPRDIN*SNGTID Trigger: ATCTATGGTGCCATTGCTTCAGTTGATATCGCGGGG...CCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAAAATAGCTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACAGGCAGAATAGCCCCCTaGATAGTTTGTAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKAAVPTSPVANSLQVTGRIAP*IVCKGF Trigger: AAATCCTTTACAAACTATTCAGGGGGCTATTCTGCC...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAAACTTGTTACAAACTTaGGCAACTTGCGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCQGCCLLIKTAAESRNLLQT*ATCAFL Trigger: AAGAAAAGCGCAAGTTGCTCAAGTTTGTAACAAGTT...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCACATTCGCATTGGAAGTaGAACATTCAGACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DLTICKFCQWVELKVSGSHSHWK*NIQTVI Trigger: GATGACAGTCTGAATGTTGCACTTCCAATGCGAATG...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTCTCAAGCATTCGCATTaGAAGTGCAACATTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QDLTICKFCQWVELKVSGLKHSH*KCNIQT Trigger: AGTCTGAATGTTGCACTTCCAATGCGAATGCTTGAG...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCAAAATAGAAGAGCCATaGCACTCCACTACACCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ANSVHLTPTAQRASRHRCKIEEP*HSTTPF Trigger: AAACGGTGTAGTGGAGTGCCATGGCTCTTCTATTTT...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCCGTCCTCAGAGTCACTaGTGGAATCAGGACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFRPQSH*WNQDSL Trigger: CAGGCTGTCCTGATTCCACCAGTGACTCTGAGGACG...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCCATCTGTGTTGTCATTaGAGAGATGAGAAACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPHLCCH*RDEKPK Trigger: CTTTGGTTTCTCATCTCTTCAATGACAACACAGATG...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAATGAGAAACCAAAGATaGCTCAAAAACCTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DLTICKFCQWVELKVSGSMRNQR*LKNLAL Trigger: CAATGCCAGGTTTTTGAGGCATCTTTGGTTTCTCAT...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | TTCAACGAAGGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCACATCCTCAGGGCTGTTaGGTTGGTCAGTCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FNEGTSFCLWSGMYPLLAHPQGC*VGQSPR Trigger: ACGAGGAGACTGACCAACCCAACAGCCCTGAGGATG...TGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACCTTCGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGTGTCCACATCTGCACTaGTTCCCAGTAGCTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRCPHLH*FPVAWT Trigger: TGTCCAAGCTACTGGGAACCAGTGCAGATGTGGACA...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCAATTTGTTCAATCACTaGCACCACATAGCTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPNLFNH*HHIARI Trigger: GATTCTAGCTATGTGGTGTCAGTGATTGAACAAATT...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAAATTTGTTCAATCACTaGCACCACATAGCTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: DLTICKFCQWVELKVSGSNLFNH*HHIARI Trigger: GATTCTAGCTATGTGGTGTCAGTGATTGAACAAATT...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | CATTCCTGTCCTGGATTCTTGGTGCACCCGTATCCCTGTCTCATATCTGACTGTCACCGTTTTGAACTTTaGCTCTCAAGTAACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSCPGFLVHPYPCLISDCHRFEL*LSSNNN Trigger: ATTGTTGTTACTTGAGAGTCAAAGTTCAAAACGGTG...ACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGAACTGTAGAGAAGCCTaGCTTTGGGCACCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRNCREA*LWAPSF Trigger: GAATGATGGTGCCCAAAGTCAGGCTTCTCTACAGTT...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAGGCTCAATGAACTGTAGAGAAGCCTaGCTTTGGGCACCATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSFCLWSGMYPLLAGSMNCREA*LWAPSF Trigger: GAATGATGGTGCCCAAAGTCAGGCTTCTCTACAGTT...CATTGAGCCTGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCCCTCCTCATAGCTCTTaGGGAAAAGCAGGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFPPHSS*GKAGSC Trigger: ACAGGAACCTGCTTTTCCTCAAGAGCTATGAGGAGG...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGAAGGAAGGGTTCTTAAGCAGGGTGTTGGTTTaGTGCTTCGTATCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTQSSLDNVHAWKEGFLSRVLV*CFVSSF Trigger: AAAACTGGATACGAAGCAGCAAACCAACACCCTGCT...TAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACAATTTGTATGCACTGCTaGATCTCAGAATTAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIKAAVPTSPVANSLQVTICMHC*ISELVV Trigger: CACTACTAATTCTGAGATGCAGCAGTGCATACAAAT...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCAGAGGCTGAGGTCAACTGGCAACAAGTTTGACCCTGATAAAGTGCCCCTGGGTAACTTTATCTaGTTTGATATCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQRLRSTGNKFDPDKVPLGNFI*FDILLF Trigger: GAACAAGAGGATATCAAAGCAGATAAAGTTACCCAG...GGGCACTTTATCAGGGTCAAACTTGTTGCCAGTTGACCTCAGCCTCTGCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCGCATGTCAGTCTCTCTaGTCCATCCAATTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFACQSL*SIQLLD Trigger: GTCAAGCAATTGGATGGATCAGAGAGACTGACATGC...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGAAGGAAGGGTTCCTGCAAAGGCCGGAATaGCGAAATGAAAAATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVTQSSLDNVHAWKEGFLQRPE*RNEKFD Trigger: ATCAAATTTTTCATTTCGTCATTCCGGCCTTTGCAG...GAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAATACTCTGAAATGCGGTaGCATATTCTTCCCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MDHGETQPATLVQMTLIKYSEMR*HILPEL Trigger: AAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTA...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAATGTGTATGGTGAAATGTTACACCCTTCCCTGAGATCACAAAATATGATAACCTTGAACAGCTaGACCCATCGCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLNVYGEMLHPSLRSQNMITLNS*THRFCS Trigger: GGAACAGAAGCGATGGGTTCAGCTGTTCAAGGTTAT...CATATTTTGTGATCTCAGGGAAGGGTGTAACATTTCACCATACACATTGAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | TTCAACGAAGGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAGATATCCTCTTGTTCTaGCAGCCAGTGGTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNEGTSFCLWSGMYPLLADILLF*QPVVWR Trigger: CCTCCAAACCACTGGCTGTCAGAACAAGAGGATATC...TGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACCTTCGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCAATGAGGCAAGATGGTaGATGTCCACATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFNEARW*MSTSAL Trigger: CAGTGCAGATGTGGACATTCACCATCTTGCCTCATT...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGTTGATCGGTAAAAGGTaGTCCCAGAAACTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRLIGKR*SQKLLC Trigger: ACAGAGGAGTTTCTGGGAGCACCTTTTACCGATCAA...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCCTTTCCAAGCATTCTaGCTAGGAAGTAGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRPFQAF*LGSSNA Trigger: GGCATTACTACTTCCTAGGCAGAATGCTTGGAAAGG...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCATCCACTAACTTTATCTaGTTTGATATCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLTICKFCQWVELKVSGSSTNFI*FDILLF Trigger: GAACAAGAGGATATCAAAGCAGATAAAGTTAGTGGA...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | CATTCCTGTCCTGGATTCTTGGTGCACCCGTATCCCTGTCTCATATCTGACTGTTCAAACGCGCTTCTTTaGATGAAGTATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSCPGFLVHPYPCLISDCSNALL*MKYCCF Trigger: AAAACAACAATACTTCATCCAAAGAAGCGCGTTTGA...ACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | CATGCAGCTATTTTCAGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGACGCGCTTCTTTGGATaGAGTATTGTTGTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAAIFSVTQSSLDNVHAWTRFFG*SIVVFC Trigger: ACAGAAAACAACAATACTTCATCCAAAGAAGCGCGT...CCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAAAATAGCTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGAAGGAAGGGTTCTTACATCTGTGTTGTCATTaGAGAGATGAGAAACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVTQSSLDNVHAWKEGFLHLCCH*RDEKPK Trigger: CTTTGGTTTCTCATCTCTTCAATGACAACACAGATG...TAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGTCTGATCCATCCAATTaGTTGACAAACAGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYIANSVHLTPTAQRASRSDPSN*LTNREL Trigger: CAGCTCTCTGTTTGTCAAGCAATTGGATGGATCAGA...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAAATGAGAAACCAAAGATaGCTCAAAAACCTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MDHGETQPATLVQMTLIKMRNQR*LKNLAL Trigger: CAATGCCAGGTTTTTGAGGCATCTTTGGTTTCTCAT...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | ACACAATTTAAAAAGGCTTACACTTCCTATGATACAAAAGCTGAGAAACCCATCCCTCAGAGTCACTGGTaGAATCAGGACAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TQFKKAYTSYDTKAEKPIPQSHW*NQDSLY Trigger: GTACAGGCTGTCCTGATTCCACCAGTGACTCTGAGG...GATGGGTTTCTCAGCTTTTGTATCATAGGAAGTGTAAGCCTTTTTAAATTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAAGAAGAGGTAAAAGAGTaGGATGATTCGACTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MDHGETQPATLVQMTLIKEEVKE*DDSTRI Trigger: GATTCTAGTCGAATCATCCCACTCTTTTACCTCTTC...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAAATGGAGATCAGCGAATaGCTGAACAAGGAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEITKYDTHYVEEMHKQEMEISE*LNKELK Trigger: CTTCAGCTCCTTGTTCAGTCATTCGCTGATCTCCAT...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTCAATGTGTATGGTGAAATGTTACACCCTTCCCTGAGATCACAAAATATGTTAACTCCTCCAGAGTaGAAGGCATCATGGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: RLNVYGEMLHPSLRSQNMLTPPE*KASWMI Trigger: AATCATCCATGATGCCTTTCACTCTGGAGGAGTTAA...CATATTTTGTGATCTCAGGGAAGGGTGTAACATTTCACCATACACATTGAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCGAAGTAGTAATGCCTTaGGAAAGAATCTCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFEVVMP*ERISHK Trigger: CTTGTGGGAGATTCTTTCGCAAGGCATTACTACTTC...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGTCTGAGCAGCTGGGTTaGGGTATAGAAGCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHESEQLG*GIEALH Trigger: ATGAAGGGCTTCTATACCCCAACCCAGCTGCTCAGA...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGATAACCTTGAACAGCTaGACCCATCGCTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEITLNS*THRFCS Trigger: GGAACAGAAGCGATGGGTTCAGCTGTTCAAGGTTAT...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGTCAGAGCCTCCATTGTaGATGCAAAACGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHESEPPL*MQNAGY Trigger: ATACCCTGCGTTTTGCATTCACAATGGAGGCTCTGA...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCTCCATTTGTATGCACTaGTGCATCTCAGAATTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HYCLDSLREACQMFTASFSICMH*CISELV Trigger: TACTAATTCTGAGATGCAGCAGTGCATACAAATGGA...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAAAATCTTCAAAAGACATaGGCGAACCCCGCGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEITKYDTHYVEEMHKQENLQKT*ANPAIS Trigger: TGATATCGCGGGGTTCGCCCATGTCTTTTGAAGATT...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGATCACAAAATATGACACCCATTATGTGGAAGAAATGCATAAACAGGAATTGCGTCTTTCTTCCTaGGTGCGATGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PEITKYDTHYVEEMHKQELRLSS*VRCKRE Trigger: TTCTCTTTTACATCGCACTCAGGAAGAAAGACGCAA...TTCCTGTTTATGCATTTCTTCCACATAATGGGTGTCATATTTTGTGATCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR TCA 90 bp | CACAATTTAAAAAGGCTTACACTTCCTATGATACAAAAGCTGAGAAACCCATCTGAAAGGCATCATGGATaGTTGTCTCTGACCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: HNLKRLTLPMIQKLRNPSERHHG*LSLTYN Trigger: GTTGTAGGTCAGAGACAATCATCCATGATGCCTTTC...AGATGGGTTTCTCAGCTTTTGTATCATAGGAAGTGTAAGCCTTTTTAAATTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTCAATGTGTATGGTGAAATGTTACACCCTTCCCTGAGATCACAAAATATGGAGCTATACGTAAAGTaGAATGGTTTTAGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RLNVYGEMLHPSLRSQNMELYVK*NGFRTF Trigger: GAATGTCCTAAAACCATTGCACTTTACGTATAGCTC...CATATTTTGTGATCTCAGGGAAGGGTGTAACATTTCACCATACACATTGAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | ACACAATTTAAAAAGGCTTACACTTCCTATGATACAAAAGCTGAGAAACCCATCTTGATCGGTAAAAGGTaGTCCCAGAAACTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQFKKAYTSYDTKAEKPILIGKR*SQKLLC Trigger: ACAGAGGAGTTTCTGGGAGCACCTTTTACCGATCAA...GATGGGTTTCTCAGCTTTTGTATCATAGGAAGTGTAAGCCTTTTTAAATTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | TGTACACTCTTCCTGGTGATCTGGAAGATTAAGTCTGTTTTAGGTTCAAATTTTCCCAATACTCTGAAATaGGGTGACATATTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CTLFLVIWKIKSVLGSNFPNTLK*GDIFFP Trigger: CGGGAAGAATATGTCACCGCATTTCAGAGTATTGGG...AAAATTTGAACCTAAAACAGACTTAATCTTCCAGATCACCAGGAAGAGTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCTCCATTTGTATGCACTaGTGCATCTCAGAATTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFSICMH*CISELV Trigger: TACTAATTCTGAGATGCAGCAGTGCATACAAATGGA...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGGATTCCATCCAGAAATaGACCATCGCCTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEDSIQK*TIALNF Trigger: GAAGTTCAAGGCGATGGTCCATTTCTGGATGGAATC...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR TCA 90 bp | TGTACACTCTTCCTGGTGATCTGGAAGATTAAGTCTGTTTTAGGTTCAAATTTTTACTCTGAAATGCGGTaGCATATTCTTCCCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CTLFLVIWKIKSVLGSNFYSEMR*HILPEL Trigger: AAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTA...AAAATTTGAACCTAAAACAGACTTAATCTTCCAGATCACCAGGAAGAGTGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | ACACAATTTAAAAAGGCTTACACTTCCTATGATACAAAAGCTGAGAAACCCATCGTCTTTCTTCCTGAGTaGGATGTAAAAGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQFKKAYTSYDTKAEKPIVFLPE*DVKEKP Trigger: AGGCTTCTCTTTTACATCGCACTCAGGAAGAAAGAC...GATGGGTTTCTCAGCTTTTGTATCATAGGAAGTGTAAGCCTTTTTAAATTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGCATTCGCATTGGAAGTaGAACATTCAGACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEHSHWK*NIQTVI Trigger: GATGACAGTCTGAATGTTGCACTTCCAATGCGAATG...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR GCA 90 bp | TTCAACGAAGGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAATTTGTATGCACTGCTaGATCTCAGAATTAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNEGTSFCLWSGMYPLLAICMHC*ISELVV Trigger: CACTACTAATTCTGAGATGCAGCAGTGCATACAAAT...TGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACCTTCGTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCTCAAACGCGCTTCTTTaGATGAAGTATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRDINWVSKAKASSLVNFSNALL*MKYCCF Trigger: AAAACAACAATACTTCATCCAAAGAAGCGCGTTTGA...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CCA 90 bp | TGTACACTCTTCCTGGTGATCTGGAAGATTAAGTCTGTTTTAGGTTCAAATTTTGAAGAGGTAAAAGAGTaGGATGATTCGACTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CTLFLVIWKIKSVLGSNFEEVKE*DDSTRI Trigger: GATTCTAGTCGAATCATCCCACTCTTTTACCTCTTC...AAAATTTGAACCTAAAACAGACTTAATCTTCCAGATCACCAGGAAGAGTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGGAGCTATACGTAAAGTaGAATGGTTTTAGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEELYVK*NGFRTF Trigger: GAATGTCCTAAAACCATTGCACTTTACGTATAGCTC...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | GACACAGACAGGGGTAAGGACTCCAGACCCACCTCCAGGGTGGACTaGAGTGGGCCAATCCTGCCCATCCTCCGGAATCGCCACACATGT | + |
|
Preference number: 5 (lower is better) Translates to: DTDRGKDSRPTSRVD*SGPILPILRNRHTC Trigger: ACATGTGTGGCGATTCCGGAGGATGGGCAGGATTGGCCCACTGCAGTCCACCCTGGAGGTGGGTCTGGAGTCCTTACCCCTGTCTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 90 bp | TCAAACATTCGGAGCCACTCTAGGCTCACAACATTGGCCAGGCCCTaGCGGAAAGCTAGGCAATGCGGTCGGATCTGCTTGTTCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNIRSHSRLTTLARP*RKARQCGRICLFSR Trigger: CCGGCTGAACAAGCAGATCCGACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCGAATGTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCTCGCTTCTGTTCCATTaGTATGCACTGCTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGHSQARRAYGSRRDAARSLLFH*YALLHL Trigger: GAGATGCAGCAGTGCATACAAATGGAACAGAAGCGA...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCGATCCATCCAATTGCTaGACAAACAGAGAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGHSQARRAYGSRRDAARDPSNC*TNRELC Trigger: ACACAGCTCTCTGTTTGTCAAGCAATTGGATGGATC...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGATCCAGGCCATGGGCATaGAGCAAGTGCACCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PGRCQGCCLLIKTAAESRSRPWA*SKCTRI Trigger: GATCCGGGTGCACTTGCTCAATGCCCATGGCCTGGA...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGCACAGCCAGGCTAGGAGGGCATATGGATCACGGAGAGACGCAGCCCGCACAAACTTGAGCAACTaGCGCTTTTCTTCGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DGHSQARRAYGSRRDAARTNLSN*RFSSSV Trigger: CACTGACGAAGAAAAGCGCAAGTTGCTCAAGTTTGT...GCGGGCTGCGTCTCTCCGTGATCCATATGCCCTCCTAGCCTGGCTGTGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS TCA 90 bp | CAGGTGCTGGCTGTAGGTAGCCGCTCAAGGTCAGAGCCTCCATTGTaGATGCAAAACGCAGGGTATAGCTCCTTGAAACCCAGGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLAVGSRSRSEPPL*MQNAGYSSLKPRRG Trigger: CCCTCTCCTGGGTTTCAAGGAGCTATACCCTGCGTTTTGCATTCACAATGGAGGCTCTGACCTTGAGCGGCTACCTACAGCCAGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 90 bp | TTTCCTGTTGGTCAAACATTCGGAGCCACTCTAGGCTCACAACATTaGCCAGGCCCTGGCGGAAAGCTAGGCAATGCGGTCGGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPVGQTFGATLGSQH*PGPGGKLGNAVGSA Trigger: AGCAGATCCGACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCGAATGTTTGACCAACAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS TCA 90 bp | AGGGTAAGGTTGGGACCATCAGCAAGGCAGAAGGTACCACCAGGCTaGGCCGAGTCAGTGCATTGGTCAAACGCGCTTCTTTGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRLGPSARQKVPPG*AESVHWSNALLWMK Trigger: CTTCATCCAAAGAAGCGCGTTTGACCAATGCACTGACTCGGCTCAGCCTGGTGGTACCTTCTGCCTTGCTGATGGTCCCAACCTTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 90 bp | TATCGTCCTCAGAGTCACTGGTGGAATCAGGACAGCCTGTACCAGTaGGTGAAGCAGGTAGCTGAGAGAGGAAGGTCTGAAGCACTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRPQSHWWNQDSLYQ*VKQVAERGRSEALA Trigger: TGCGAGTGCTTCAGACCTTCCTCTCTCAGCTACCTGCTTCACCCACTGGTACAGGCTGTCCTGATTCCACCAGTGACTCTGAGGACGATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 90 bp | AGCCTGACTTTGGGCACCATCATTCGGTGCTGCACCATCAATGTGTaGCAGATAGAAGCCATCCTTGTGAAGACCTCCTCACTGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTLGTIIRCCTINV*QIEAILVKTSSLAE Trigger: CTCGGCCAGTGAGGAGGTCTTCACAAGGATGGCTTCTATCTGCCACACATTGATGGTGCAGCACCGAATGATGGTGCCCAAAGTCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACGGCCCGAACTTCTGGCTTaGTTTCCGGGTATGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKAAVPTSPVANSLQVTRPELLA*FPGMLA Trigger: AGCTAGCATACCCGGAAACAAAGCCAGAAGTTCGGG...CCGTGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCACTGGTTCCCAGTAGCTaGGACAGGAAAAAGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQQHKEPPGTDAGLRREALVPSS*DRKKPA Trigger: TGCTGGCTTTTTCCTGTCCAAGCTACTGGGAACCAG...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | AGCTCAGCTCAAAGCCAGCAGCACACTCAATGGCATACAGCAGCTTaGTTCGCAGCAGGGCTTCATCATAAAACTCTGGGAGCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAQSQQHTQWHTAA*FAAGLHHKTLGASA Trigger: TGCTGAAGCTCCCAGAGTTTTATGATGAAGCCCTGCTGCGAAGCAAGCTGCTGTATGCCATTGAGTGTGCTGCTGGCTTTGAGCTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCCTGCCACATTCCTGTCCTGGATTCTTGGTGCACCCGTATCCCTGTCTCACAGCAGGGTGTTGGTTaGCTGCTTCGTATCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MSCHIPVLDSWCTRIPVSQQGVG*LLRIQF Trigger: AAACTGGATACGAAGCAGCAAACCAACACCCTGCTG...TGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATGTGGCAGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS GCA 90 bp | CTGGCCGAGTCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTTGCTaGTTCGTATCCAGTTTTCTCAGACACTCTTCAGTAATATATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAESLHTRFSRVLVC*FVSSFLRHSSVIYG Trigger: CCCATATATTACTGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCAGTCATCACTACAGTTTaGCAGCAACCTGCAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQQHKEPPGTDAGLRREAVITTV*QQPATE Trigger: CTCTGTTGCAGGTTGCTGCAAAACTGTAGTGATGAC...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCAGGTTCAGCAGGGTGTaGGTTTGCTGCTTCGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: ANSVHLTPTAQRASRHRCRFSRV*VCCFVS Trigger: GGATACGAAGCAGCAAACCAACACCCTGCTGAACCT...GCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGAAATGGACCATCGCCTaGAACTTCTTGCTTATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCCLLIKTAAESRGAEAWKWTIA*NFLLIS Trigger: GCTGATAAGCAAGAAGTTCAAGGCGATGGTCCATTT...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGGGAAGTAGTAATGCCTaGCGAAAGAATCTCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GCCLLIKTAAESRGAEAWGSSNA*RKNLPQ Trigger: TTGTGGGAGATTCTTTCGCAAGGCATTACTACTTCC...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCAGCTTCTCCCAGGTCATaGTTCACCACAGTAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQQHKEPPGTDAGLRREAASPRS*FTTVKF Trigger: GAACTTTACTGTGGTGAACAATGACCTGGGAGAAGC...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | TGGGCCAATCCTGCCCATCCTCCGGAATCGCCACACATGTCTAGATaGAGGTACATAGAGCTGGGTAACTTTATCTGCTTTGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WANPAHPPESPHMSR*RYIELGNFICFDIL Trigger: GAGGATATCAAAGCAGATAAAGTTACCCAGCTCTATGTACCTGCATCTAGACATGTGTGGCGATTCCGGAGGATGGGCAGGATTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAAGCCATATCAAACGTTaGGAGTCTTCACTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRCQGCCLLIKTAAESRSHIKR*ESSLCL Trigger: CAAGCAGAGTGAAGACTCCAAACGTTTGATATGGCT...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | TTAATAAAAGCTGCAGTGCCCACATCCCCAGTTGCCAACTCACTGCAGGTGACACAGCAGGGTGTTGGTTaGCTGCTTCGTATCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LIKAAVPTSPVANSLQVTQQGVG*LLRIQF Trigger: AAACTGGATACGAAGCAGCAAACCAACACCCTGCTG...TGTCACCTGCAGTGAGTTGGCAACTGGGGATGTGGGCACTGCAGCTTTTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAATCTAGGCTCACAACATaGGCCAGGCCCTGGCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MDHGETQPATLVQMTLIKSRLTT*ARPWRK Trigger: TTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGA...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | TCACTGGCCGAGTCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTTaGTGCTTCGTATCCAGTTTTCTCAGACACTCTTCAGTAATATAT | + |
|
Preference number: 5 (lower is better) Translates to: SLAESLHTRFSRVLV*CFVSSFLRHSSVIY Trigger: ATATATTACTGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCGGCCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTCCTCAAGCATTCGCATaGGAAGTGCAACATTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QDLTICKFCQWVELKVSGPQAFA*EVQHSD Trigger: GTCTGAATGTTGCACTTCCAATGCGAATGCTTGAGG...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAGACGAAATGAAAAATTaGATCGGTAAAAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRDEMKN*IGKRCS Trigger: GGAGCACCTTTTACCGATCAAATTTTTCATTTCGTC...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCTGTCCTGGATTCTTGGTGCACCCGTATCCCTGTCTCATATCTGACTGTTCGCTTCTGTTCCATTaGTATGCACTGCTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSCPGFLVHPYPCLISDCSLLFH*YALLHL Trigger: GAGATGCAGCAGTGCATACAAATGGAACAGAAGCGA...ACAGTCAGATATGAGACAGGGATACGGGTGCACCAAGAATCCAGGACAGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGAGGTGCTGAGGCCTGGAGCATAAATCAACCTTaGAAAGATCTTCACTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCCLLIKTAAESRGAEAWSINQP*KDLHSL Trigger: GAGCGAGTGAAGATCTTTCAAAGGTTGATTTATGCT...CCAGGCCTCAGCACCTCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAACAGCACAAAGAGCCTCCAGGCACAGATGCTGGACTTAGACGAGAAGCATTAAAGAAGCCCTGGTaGGGGTTAAATCCAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQQHKEPPGTDAGLRREALKKPW*GLNPDF Trigger: GAAATCTGGATTTAACCCCAACCAGGGCTTCTTTAA...TGCTTCTCGTCTAAGTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGAAGGAAGGGTTCTTAACTTTGGGCCTTGTCTaGAAGTCGCCTTCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVTQSSLDNVHAWKEGFLTLGLV*KSPSKL Trigger: CAGCTTCGAAGGCGACTTCAAGACAAGGCCCAAAGT...TAAGAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGACCAAGAGGGTAAGGTaGGGACCATCAGCAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYIANSVHLTPTAQRASRTKRVR*GPSARQ Trigger: CTGCCTTGCTGATGGTCCCAACCTTACCCTCTTGGT...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTTACTCAGAGTTCCTTGGACAATGTACATGCCTGGAAGGAAGGGTTCATAAGGGAACACAGTTaGTGCATCTGCAAAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVTQSSLDNVHAWKEGFIREHS*CICKGR Trigger: CCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTAT...GAACCCTTCCTTCCAGGCATGTACATTGTCCAAGGAACTCTGAGTAACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAATCGCCTTGAACTTCTaGCTTATCAGCATAAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALPWQMPGMLSSYQDSGRIALNF*LISINQ Trigger: TTGATTTATGCTGATAAGCAAGAAGTTCAAGGCGAT...TCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGGGAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | GCACTGCTGCATCTCAGAATTAGTAGTGACCCCAATACTCTGAAATaGGGTGACATATTCTTCCCGAACTTCTGGCTTTGTTTCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALLHLRISSDPNTLK*GDIFFPNFWLCFRV Trigger: TACCCGGAAACAAAGCCAGAAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTATTGGGGTCACTACTAATTCTGAGATGCAGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGACTTTGGGCCTTGTCTaGAAGTCGCCTTCGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KYIANSVHLTPTAQRASRTLGLV*KSPSKL Trigger: CAGCTTCGAAGGCGACTTCAAGACAAGGCCCAAAGT...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAGGCTCAATGAGGTTCAGCAGGGTGTaGGTTTGCTGCTTCGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GTSFCLWSGMYPLLAGSMRFSRV*VCCFVS Trigger: GGATACGAAGCAGCAAACCAACACCCTGCTGAACCT...CATTGAGCCTGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCAAGCATTTTCACTAGGTaGGTGATAACCTTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLTICKFCQWVELKVSGSSIFTR*VITLNS Trigger: GCTGTTCAAGGTTATCACCAACCTAGTGAAAATGCT...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAGATGCCAGGGATGCTGTCTTCTTATCAAGACAGCGGCAGAAAGCAGACTCCTTATAGTAACATaGATTCCATCCAGAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGRCQGCCLLIKTAAESRLLIVT*IPSRNG Trigger: TCCATTTCTGGATGGAATCAATGTTACTATAAGGAG...TCTGCTTTCTGCCGCTGTCTTGATAAGAAGACAGCATCCCTGGCATCTGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS TCA 90 bp | CGACTAGAATCTTCAAAAGACATGGGCGAACCCCGCGATATCAACTaGAGCAATGGCACCATAGATCCTGTGATCATCTGTGTTGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: RLESSKDMGEPRDIN*SNGTIDPVIICVVI Trigger: AATGACAACACAGATGATCACAGGATCTATGGTGCCATTGCTTCAGTTGATATCGCGGGGTTCGCCCATGTCTTTTGAAGATTCTAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCAGAAAACTTGATGCCTaGAGGCTTCAGGACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HYCLDSLREACQMFTASFRKLDA*RLQDRS Trigger: GCTCCTGTCCTGAAGCCTCAAGGCATCAAGTTTTCT...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CAAGACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTGACGAAATGAAAAATTaGATCGGTAAAAGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDLTICKFCQWVELKVSGDEMKN*IGKRCS Trigger: GGAGCACCTTTTACCGATCAAATTTTTCATTTCGTC...ACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTCAATGTGTATGGTGAAATGTTACACCCTTCCCTGAGATCACAAAATATGCCCGAACTTCTGGCTTaGTTTCCGGGTATGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLNVYGEMLHPSLRSQNMPELLA*FPGMLA Trigger: AGCTAGCATACCCGGAAACAAAGCCAGAAGTTCGGG...CATATTTTGTGATCTCAGGGAAGGGTGTAACATTTCACCATACACATTGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATATTGCTAATTCTGTTCACCTAACTCCAACAGCACAAAGAGCCTCCAGGCTGACAGCCAGTGGTTaGGAGGACAGAAATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYIANSVHLTPTAQRASRLTASG*EDRNFS Trigger: GGAGAAATTTCTGTCCTCCAAACCACTGGCTGTCAG...CCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAACAGAATTAGCAATATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCCTGACAGCCAGTGGTTaGGAGGACAGAAATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HYCLDSLREACQMFTASFLTASG*EDRNFS Trigger: GGAGAAATTTCTGTCCTCCAAACCACTGGCTGTCAG...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS TCA 90 bp | TGTATGCACTGCTGCATCTCAGAATTAGTAGTGACCCCAATACTCTaGAATGCGGTGACATATTCTTCCCGAACTTCTGGCTTTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CMHCCISELVVTPIL*NAVTYSSRTSGFVS Trigger: GGAAACAAAGCCAGAAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTATTGGGGTCACTACTAATTCTGAGATGCAGCAGTGCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 90 bp | TGGGTAACTTTATCTGCTTTGATATCCTCTTGTTCTGACAGCCAGTaGTTTGGAGGACAGAAATTTCTCCTCGTGTCTCTAGACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVTLSALISSCSDSQ*FGGQKFLLVSLDFS Trigger: GCTGAAGTCTAGAGACACGAGGAGAAATTTCTGTCCTCCAAACCACTGGCTGTCAGAACAAGAGGATATCAAAGCAGATAAAGTTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 90 bp | CCACTAACTTTATCTGCTTTGATATCCTCTTGTTCTGACAGCCAGTaGTTTGGAGGACAGAAATTTCTCCTCGTGTCTCTAGACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLTLSALISSCSDSQ*FGGQKFLLVSLDFS Trigger: GCTGAAGTCTAGAGACACGAGGAGAAATTTCTGTCCTCCAAACCACTGGCTGTCAGAACAAGAGGATATCAAAGCAGATAAAGTTAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GACCTGACCATATGCAAATTCTGCCAGTGGGTGGAGCTGAAGGTATCAGGTTCATTGGATGAAGTATTGTaGTTTTCTGTCTCTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLTICKFCQWVELKVSGSLDEVL*FSVSIA Trigger: GGCTATAGAGACAGAAAACAACAATACTTCATCCAA...TGAACCTGATACCTTCAGCTCCACCCACTGGCAGAATTTGCATATGGTCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | ATGGATCACGGAGAGACGCAGCCCGCCACTTTGGTTCAAATGACTTTAATAAAATACCTGAATTTCCTGTaGGTCAAACATTCGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MDHGETQPATLVQMTLIKYLNFL*VKHSEP Trigger: TGGCTCCGAATGTTTGACCAACAGGAAATTCAGGTA...TTTTATTAAAGTCATTTGAACCAAAGTGGCGGGCTGCGTCTCTCCGTGATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAGGCTCAATGAGCCATATCAAACGTTaGGAGTCTTCACTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTSFCLWSGMYPLLAGSMSHIKR*ESSLCL Trigger: CAAGCAGAGTGAAGACTCCAAACGTTTGATATGGCT...CATTGAGCCTGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | CACTACTGTCTAGATAGCCTTAGAGAGGCATGCCAAATGTTTACTGCTTCTTTCGATCCATCCAATTGCTaGACAAACAGAGAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HYCLDSLREACQMFTASFDPSNC*TNRELC Trigger: ACACAGCTCTCTGTTTGTCAAGCAATTGGATGGATC...GAAAGAAGCAGTAAACATTTGGCATGCCTCTCTAAGGCTATCTAGACAGTAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCCCTCAAGCATTCGCATaGGAAGTGCAACATTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRDINWVSKAKASSLVNFPQAFA*EVQHSD Trigger: GTCTGAATGTTGCACTTCCAATGCGAATGCTTGAGG...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 90 bp | GTATGTATTCTCAGATGTAAACACCTCAAGCATTCGCATTGGAAGTaGAACATTCAGACTGTCATCACTACAGTTTTGCAGCAACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCILRCKHLKHSHWK*NIQTVITTVLQQPA Trigger: TGCAGGTTGCTGCAAAACTGTAGTGATGACAGTCTGAATGTTGCACTTCCAATGCGAATGCTTGAGGTGTTTACATCTGAGAATACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS GCA 90 bp | CAATGCATTGAGAAAGGGCTCATAAGGGAACACAGTTTGTGCATCTaGAAAGGCCGGAATGACGAAATGAAAAATTTGATCGGTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCIEKGLIREHSLCI*KGRNDEMKNLIGKR Trigger: CCTTTTACCGATCAAATTTTTCATTTCGTCATTCCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTATGAGCCCTTTCTCAATGCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | TTCAACGAAGGTACAAGCTTTTGTTTATGGTCTGGAATGTACCCATTACTTGCAGTCATCACTACAGTTTaGCAGCAACCTGCAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FNEGTSFCLWSGMYPLLAVITTV*QQPATE Trigger: CTCTGTTGCAGGTTGCTGCAAAACTGTAGTGATGAC...TGCAAGTAATGGGTACATTCCAGACCATAAACAAAAGCTTGTACCTTCGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199032.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGAGAAAACTTGATGCCTaGAGGCTTCAGGACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKMPSVFTIRLVNNQPHERKLDA*RLQDRS Trigger: GCTCCTGTCCTGAAGCCTCAAGGCATCAAGTTTTCT...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGATAAGGGAACACAGTTaGTGCATCTGCAAAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEIREHS*CICKGR Trigger: CCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTAT...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGATATAAACTGGGTCAGCAAGGCCAAAGCTTCATCTTTGGTTAATTTCTTGGATGAAGTATTGTaGTTTTCTGTCTCTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRDINWVSKAKASSLVNFLDEVL*FSVSIA Trigger: GGCTATAGAGACAGAAAACAACAATACTTCATCCAA...GAAATTAACCAAAGATGAAGCTTTGGCCTTGCTGACCCAGTTTATATCCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGAGCATTTTCACTAGGTaGGTGATAACCTTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKMPSVFTIRLVNNQPHESIFTR*VITLNS Trigger: GCTGTTCAAGGTTATCACCAACCTAGTGAAAATGCT...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAAATGCCTTCAGTTTTTACAATTAGGCTTGTAAACAATCAACCACATGAGCAACTTGTTACAAACTaGAGCAACTTGCGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKMPSVFTIRLVNNQPHEQLVTN*SNLRFS Trigger: AGAAAAGCGCAAGTTGCTCAAGTTTGTAACAAGTTG...CTCATGTGGTTGATTGTTTACAAGCCTAATTGTAAAAACTGAAGGCATTTTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS GCA 72 bp | AGGGGTAAGGACTCCAGACCCACCTCCAGGGTGGACTaGAGTGGGCCAATCCTGCCCATCCTCCGGAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGKDSRPTSRVD*SGPILPILRNR Trigger: GCGATTCCGGAGGATGGGCAGGATTGGCCCACTGCAGTCCACCCTGGAGGTGGGTCTGGAGTCCTTACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 72 bp | CAGACAGGGGTAAGGACTCCAGACCCACCTCCAGGGTaGACTGCAGTGGGCCAATCCTGCCCATCCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QTGVRTPDPPPG*TAVGQSCPSSG Trigger: TCCGGAGGATGGGCAGGATTGGCCCACTGCAGTCCACCCTGGAGGTGGGTCTGGAGTCCTTACCCCTGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 72 bp | CGGAGCCACTCTAGGCTCACAACATTGGCCAGGCCCTaGCGGAAAGCTAGGCAATGCGGTCGGATCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSHSRLTTLARP*RKARQCGRICL Trigger: CAAGCAGATCCGACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CCA 72 bp | GGTCAAACATTCGGAGCCACTCTAGGCTCACAACATTaGCCAGGCCCTGGCGGAAAGCTAGGCAATGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GQTFGATLGSQH*PGPGGKLGNAV Trigger: GACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCGAATGTTTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CAA 72 bp | TGGTCAAACATTCGGAGCCACTCTAGGCTCACAACATaGGCCAGGCCCTGGCGGAAAGCTAGGCAATGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WSNIRSHSRLTT*ARPWRKARQCG Trigger: ACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCGAATGTTTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CAA 90 bp | ATTTCCTGTTGGTCAAACATTCGGAGCCACTCTAGGCTCACAACATaGGCCAGGCCCTGGCGGAAAGCTAGGCAATGCGGTCGGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISCWSNIRSHSRLTT*ARPWRKARQCGRIC Trigger: GCAGATCCGACCGCATTGCCTAGCTTTCCGCCAGGGCCTGGCCAATGTTGTGAGCCTAGAGTGGCTCCGAATGTTTGACCAACAGGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS TCA 72 bp | TTGGGACCATCAGCAAGGCAGAAGGTACCACCAGGCTaGGCCGAGTCAGTGCATTGGTCAAACGCGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGPSARQKVPPG*AESVHWSNALL Trigger: AAGAAGCGCGTTTGACCAATGCACTGACTCGGCTCAGCCTGGTGGTACCTTCTGCCTTGCTGATGGTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 72 bp | GGTCAGTCTCCTCGTTATCGTCCTCAGAGTCACTGGTaGAATCAGGACAGCCTGTACCAGTGGGTGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GQSPRYRPQSHW*NQDSLYQWVKQ Trigger: CTGCTTCACCCACTGGTACAGGCTGTCCTGATTCCACCAGTGACTCTGAGGACGATAACGAGGAGACTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CAA 72 bp | ATATATGGGGCTGACACCCTGCCATCCTCAGGGCTGTaGGGTTGGTCAGTCTCCTCGTTATCGTCCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IYGADTLPSSGL*GWSVSSLSSSE Trigger: CTCTGAGGACGATAACGAGGAGACTGACCAACCCAACAGCCCTGAGGATGGCAGGGTGTCAGCCCCATATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CAA 72 bp | CTGGCCGAGTCCCTCCACACCAGGTTCAGCAGGGTGTaGGTTTGCTGCTTCGTATCCAGTTTTCTCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LAESLHTRFSRV*VCCFVSSFLRH Trigger: GTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 72 bp | CAGAGTCACTGGTGGAATCAGGACAGCCTGTACCAGTaGGTGAAGCAGGTAGCTGAGAGAGGAAGGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSHWWNQDSLYQ*VKQVAERGRSE Trigger: TTCAGACCTTCCTCTCTCAGCTACCTGCTTCACCCACTGGTACAGGCTGTCCTGATTCCACCAGTGACTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 72 bp | GTTGGTCAGTCTCCTCGTTATCGTCCTCAGAGTCACTaGTGGAATCAGGACAGCCTGTACCAGTGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VGQSPRYRPQSH*WNQDSLYQWVK Trigger: CTTCACCCACTGGTACAGGCTGTCCTGATTCCACCAGTGACTCTGAGGACGATAACGAGGAGACTGACCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CCA 72 bp | CAGCTTGCTTCGCAGCAGGGCTTCATCATAAAACTCTaGGAGCTTCAGCAGGTTCATGCAGGTGCTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLASQQGFIIKL*ELQQVHAGAGC Trigger: ACAGCCAGCACCTGCATGAACCTGCTGAAGCTCCCAGAGTTTTATGATGAAGCCCTGCTGCGAAGCAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
||
| CDS CAA 72 bp | TTTTCTTCCTTCCTGCTCGCGCCACCGAGAGACACTTaGGGCCTTGTCTTGAAGTCGCCTTCGAAGCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSSFLLAPPRDT*GLVLKSPSKLN Trigger: GTTCAGCTTCGAAGGCGACTTCAAGACAAGGCCCAAAGTGTCTCTCGGTGGCGCGAGCAGGAAGGAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
||
| CDS CAA 90 bp | ACCTCCTCACTGGCCGAGTCCCTCCACACCAGGTTCAGCAGGGTGTaGGTTTGCTGCTTCGTATCCAGTTTTCTCAGACACTCTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TSSLAESLHTRFSRV*VCCFVSSFLRHSSV Trigger: TACTGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCGGCCAGTGAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS TCA 72 bp | TCAGTCCCAGTTCCTCCACATCCTCCTCATAGCTCTTaGGGAAAAGCAGGTTCCTGTAGACTTCGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVPVPPHPPHSS*GKAGSCRLRGP Trigger: TGGACCCCGAAGTCTACAGGAACCTGCTTTTCCTCAAGAGCTATGAGGAGGATGTGGAGGAACTGGGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS TCA 72 bp | GCTGTAGGTAGCCGCTCAAGGTCAGAGCCTCCATTGTaGATGCAAAACGCAGGGTATAGCTCCTTGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: AVGSRSRSEPPL*MQNAGYSSLKP Trigger: GGGTTTCAAGGAGCTATACCCTGCGTTTTGCATTCACAATGGAGGCTCTGACCTTGAGCGGCTACCTACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CCA 72 bp | GGTAGTCAGCCACCAGGTGGATGTAGGCAATTCGGTTaGCCCCAGTTACCGGGATGTCTTTTCCACCAAATT | + |
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Preference number: 6 (lower is better) Translates to: GSQPPGGCRQFG*PQLPGCLFHQI Trigger: AATTTGGTGGAAAAGACATCCCGGTAACTGGGGCCAACCGAATTGCCTACATCCACCTGGTGGCTGACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 72 bp | CGAGTCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTaGCTGCTTCGTATCCAGTTTTCTCAGACACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RVPPHQVQQGVG*LLRIQFSQTLF Trigger: GAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | TCCCGAACTTCTGGCTTTGTTTCCGGGTATGCTAGCTaGATGATCCCCAAGCAGGCATCTCGAAGGCATCGT | + |
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Preference number: 6 (lower is better) Translates to: SRTSGFVSGYAS*MIPKQASRRHR Trigger: ACGATGCCTTCGAGATGCCTGCTTGGGGATCATCAAGCTAGCATACCCGGAAACAAAGCCAGAAGTTCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 90 bp | ACATATTCTTCCCGAACTTCTGGCTTTGTTTCCGGGTATGCTAGCTaGATGATCCCCAAGCAGGCATCTCGAAGGCATCGTGACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TYSSRTSGFVSGYAS*MIPKQASRRHRDSR Trigger: CCTGCTGTCACGATGCCTTCGAGATGCCTGCTTGGGGATCATCAAGCTAGCATACCCGGAAACAAAGCCAGAAGTTCGGGAAGAATATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS TCA 72 bp | GAGGAAAAGCAGGTTCCTGTAGACTTCGGGGTCCAATaGGGCAAGATGGTGAATGTCCACATCTGCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: EEKQVPVDFGVQ*GKMVNVHICTG Trigger: ACCAGTGCAGATGTGGACATTCACCATCTTGCCTCATTGGACCCCGAAGTCTACAGGAACCTGCTTTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS GCA 72 bp | GAGTCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTTaGTGCTTCGTATCCAGTTTTCTCAGACACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ESLHTRFSRVLV*CFVSSFLRHSS Trigger: TGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | CAAAGCCAGCAGCACACTCAATGGCATACAGCAGCTTaGTTCGCAGCAGGGCTTCATCATAAAACTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QSQQHTQWHTAA*FAAGLHHKTLG Trigger: TCCCAGAGTTTTATGATGAAGCCCTGCTGCGAAGCAAGCTGCTGTATGCCATTGAGTGTGCTGCTGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CCA 72 bp | TTGGGCACCATCATTCGGTGCTGCACCATCAATGTGTaGCAGATAGAAGCCATCCTTGTGAAGACCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LGTIIRCCTINV*QIEAILVKTSS Trigger: TGAGGAGGTCTTCACAAGGATGGCTTCTATCTGCCACACATTGATGGTGCAGCACCGAATGATGGTGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CCA 72 bp | CCTCAAATGGAACCACAAAAGGCAGTTCTGTCAGGATaGCAAGCTGTCGTTCCTCAGACACAGACAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PQMEPQKAVLSG*QAVVPQTQTGV Trigger: TACCCCTGTCTGTGTCTGAGGAACGACAGCTTGCCATCCTGACAGAACTGCCTTTTGTGGTTCCATTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 90 bp | CTCACTGGCCGAGTCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTaGCTGCTTCGTATCCAGTTTTCTCAGACACTCTTCAGTAATATA | + |
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Preference number: 6 (lower is better) Translates to: LTGRVPPHQVQQGVG*LLRIQFSQTLFSNI Trigger: TATATTACTGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGACTCGGCCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 90 bp | CATACAGAGCCTTTCCAAGCATTCTGCCTAGGAAGTAGTAATGCCTaGCGAAAGAATCTCCCACAAGCATCTGAGCAGCTGGGTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: HTEPFQAFCLGSSNA*RKNLPQASEQLGWG Trigger: ACCCCAACCCAGCTGCTCAGATGCTTGTGGGAGATTCTTTCGCAAGGCATTACTACTTCCTAGGCAGAATGCTTGGAAAGGCTCTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS GCA 72 bp | TCCCTCCACACCAGGTTCAGCAGGGTGTTGGTTTGCTaGTTCGTATCCAGTTTTCTCAGACACTCTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SLHTRFSRVLVC*FVSSFLRHSSV Trigger: TACTGAAGAGTGTCTGAGAAAACTGGATACGAAGCAGCAAACCAACACCCTGCTGAACCTGGTGTGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | CCTGCCCATCCTCCGGAATCGCCACACATGTCTAGATaGAGGTACATAGAGCTGGGTAACTTTATCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PAHPPESPHMSR*RYIELGNFICF Trigger: AAAGCAGATAAAGTTACCCAGCTCTATGTACCTGCATCTAGACATGTGTGGCGATTCCGGAGGATGGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CCA 72 bp | AGACATGGGCGAACCCCGCGATATCAACTGAAGCAATaGCACCATAGATCCTGTGATCATCTGTGTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: RHGRTPRYQLKQ*HHRSCDHLCCH Trigger: ATGACAACACAGATGATCACAGGATCTATGGTGCCATTGCTTCAGTTGATATCGCGGGGTTCGCCCATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | CCTTTCCAAGCATTCTGCCTAGGAAGTAGTAATGCCTaGCGAAAGAATCTCCCACAAGCATCTGAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PFQAFCLGSSNA*RKNLPQASEQL Trigger: CAGCTGCTCAGATGCTTGTGGGAGATTCTTTCGCAAGGCATTACTACTTCCTAGGCAGAATGCTTGGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS TCA 72 bp | TCTTCAAAAGACATGGGCGAACCCCGCGATATCAACTaGAGCAATGGCACCATAGATCCTGTGATCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSKDMGEPRDIN*SNGTIDPVIIC Trigger: ACAGATGATCACAGGATCTATGGTGCCATTGCTTCAGTTGATATCGCGGGGTTCGCCCATGTCTTTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | AATTTTAGTTCAACCACCTGGGCTTCTCCCAGGTCATaGTTCACCACAGTAAAGTTCAGTCCCAGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NFSSTTWASPRS*FTTVKFSPSSS Trigger: GGAGGAACTGGGACTGAACTTTACTGTGGTGAACAATGACCTGGGAGAAGCCCAGGTGGTTGAACTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS TCA 72 bp | TGCTGCATCTCAGAATTAGTAGTGACCCCAATACTCTaGAATGCGGTGACATATTCTTCCCGAACTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CCISELVVTPIL*NAVTYSSRTSG Trigger: GCCAGAAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTATTGGGGTCACTACTAATTCTGAGATGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 90 bp | GTTGGTGATAACCTTGAACAGCTGAACCCATCGCTTCTGTTCCATTaGTATGCACTGCTGCATCTCAGAATTAGTAGTGACCCCAATACT | + |
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Preference number: 6 (lower is better) Translates to: VGDNLEQLNPSLLFH*YALLHLRISSDPNT Trigger: AGTATTGGGGTCACTACTAATTCTGAGATGCAGCAGTGCATACAAATGGAACAGAAGCGATGGGTTCAGCTGTTCAAGGTTATCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CCA 72 bp | AATCAACCTTTGAAAGATCTTCACTCGCTCCTCAAATaGAACCACAAAAGGCAGTTCTGTCAGGATGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: NQPLKDLHSLLK*NHKRQFCQDGK Trigger: CTTGCCATCCTGACAGAACTGCCTTTTGTGGTTCCATTTGAGGAGCGAGTGAAGATCTTTCAAAGGTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 72 bp | TGCATCTGCAAAGGCCGGAATGACGAAATGAAAAATTaGATCGGTAAAAGGTGCTCCCAGAAACTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: CICKGRNDEMKN*IGKRCSQKLLC Trigger: ACAGAGGAGTTTCTGGGAGCACCTTTTACCGATCAAATTTTTCATTTCGTCATTCCGGCCTTTGCAGATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | CAATGCATTGAGAAAGGGCTCATAAGGGAACACAGTTaGTGCATCTGCAAAGGCCGGAATGACGAAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: QCIEKGLIREHS*CICKGRNDEMK Trigger: TTTCATTTCGTCATTCCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTATGAGCCCTTTCTCAATGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | AACCTTGAACAGCTGAACCCATCGCTTCTGTTCCATTaGTATGCACTGCTGCATCTCAGAATTAGTAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: NLEQLNPSLLFH*YALLHLRISSD Trigger: GTCACTACTAATTCTGAGATGCAGCAGTGCATACAAATGGAACAGAAGCGATGGGTTCAGCTGTTCAAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | GAGAAAGGGCTCATAAGGGAACACAGTTTGTGCATCTaGAAAGGCCGGAATGACGAAATGAAAAATTTGATC | + |
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Preference number: 6 (lower is better) Translates to: EKGLIREHSLCI*KGRNDEMKNLI Trigger: GATCAAATTTTTCATTTCGTCATTCCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTATGAGCCCTTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | TGCATTGAGAAAGGGCTCATAAGGGAACACAGTTTGTaGATCTGCAAAGGCCGGAATGACGAAATGAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: CIEKGLIREHSL*ICKGRNDEMKN Trigger: ATTTTTCATTTCGTCATTCCGGCCTTTGCAGATGCACAAACTGTGTTCCCTTATGAGCCCTTTCTCAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | CATCTCAGAATTAGTAGTGACCCCAATACTCTGAAATaGGGTGACATATTCTTCCCGAACTTCTGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: HLRISSDPNTLK*GDIFFPNFWLC Trigger: ACAAAGCCAGAAGTTCGGGAAGAATATGTCACCGCATTTCAGAGTATTGGGGTCACTACTAATTCTGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CCA 72 bp | TTATCTGCTTTGATATCCTCTTGTTCTGACAGCCAGTaGTTTGGAGGACAGAAATTTCTCCTCGTGTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LSALISSCSDSQ*FGGQKFLLVSL Trigger: TAGAGACACGAGGAGAAATTTCTGTCCTCCAAACCACTGGCTGTCAGAACAAGAGGATATCAAAGCAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS GCA 72 bp | TGCCTTGAGGCTTCAGGACAGGAGCTATACGTAAAGTaGAATGGTTTTAGGACATTCTCCAGCAAAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: CLEASGQELYVK*NGFRTFSSKIF Trigger: AAAAATTTTGCTGGAGAATGTCCTAAAACCATTGCACTTTACGTATAGCTCCTGTCCTGAAGCCTCAAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 90 bp | CGAGTCAGTGCATTGGTCAAACGCGCTTCTTTGGATGAAGTATTGTaGTTTTCTGTCTCTATAGCCTCGGATAAAAGATTGGATTATTAC | + |
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Preference number: 6 (lower is better) Translates to: RVSALVKRASLDEVL*FSVSIASDKRLDYY Trigger: GTAATAATCCAATCTTTTATCCGAGGCTATAGAGACAGAAAACAACAATACTTCATCCAAAGAAGCGCGTTTGACCAATGCACTGACTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 90 bp | AGTAACATTGATTCCATCCAGAAATGGACCATCGCCTTGAACTTCTaGCTTATCAGCATAAATCAACCTTTGAAAGATCTTCACTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: SNIDSIQKWTIALNF*LISINQPLKDLHSL Trigger: GAGCGAGTGAAGATCTTTCAAAGGTTGATTTATGCTGATAAGCAAGAAGTTCAAGGCGATGGTCCATTTCTGGATGGAATCAATGTTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CCA 72 bp | TGTATTCTCAGATGTAAACACCTCAAGCATTCGCATTaGAAGTGCAACATTCAGACTGTCATCACTACAGTT | + |
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Preference number: 6 (lower is better) Translates to: CILRCKHLKHSH*KCNIQTVITTV Trigger: AACTGTAGTGATGACAGTCTGAATGTTGCACTTCCAATGCGAATGCTTGAGGTGTTTACATCTGAGAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS TCA 72 bp | GTTTTGAACTTTGACTCTCAAGTAACAACAATGCATTaGGAAAGGGCTCATAAGGGAACACAGTTTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VLNFDSQVTTMH*ERAHKGTQFVH Trigger: ATGCACAAACTGTGTTCCCTTATGAGCCCTTTCTCAATGCATTGTTGTTACTTGAGAGTCAAAGTTCAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049453.9 ENSMUST00000199032.2 |
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| CDS CAA 72 bp | GATTCCATCCAGAAATGGACCATCGCCTTGAACTTCTaGCTTATCAGCATAAATCAACCTTTGAAAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: DSIQKWTIALNF*LISINQPLKDL Trigger: AAGATCTTTCAAAGGTTGATTTATGCTGATAAGCAAGAAGTTCAAGGCGATGGTCCATTTCTGGATGGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 72 bp | AGTAACATTGATTCCATCCAGAAATGGACCATCGCCTaGAACTTCTTGCTTATCAGCATAAATCAACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SNIDSIQKWTIA*NFLLISINQPL Trigger: CAAAGGTTGATTTATGCTGATAAGCAAGAAGTTCAAGGCGATGGTCCATTTCTGGATGGAATCAATGTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CCA 72 bp | TATAGAAGCCCTTCATTAGTAGTCTTAAAGAAGCCCTaGTTGGGGTTAAATCCAGATTTCAGTAGTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: YRSPSLVVLKKP*LGLNPDFSSSF Trigger: AAATGAACTACTGAAATCTGGATTTAACCCCAACCAGGGCTTCTTTAAGACTACTAATGAAGGGCTTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 72 bp | AGAAGCCCTTCATTAGTAGTCTTAAAGAAGCCCTGGTaGGGGTTAAATCCAGATTTCAGTAGTTCATTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RSPSLVVLKKPW*GLNPDFSSSFK Trigger: TTTAAATGAACTACTGAAATCTGGATTTAACCCCAACCAGGGCTTCTTTAAGACTACTAATGAAGGGCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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| CDS CAA 90 bp | TCTCCTTATAGTAACATTGATTCCATCCAGAAATGGACCATCGCCTaGAACTTCTTGCTTATCAGCATAAATCAACCTTTGAAAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: SPYSNIDSIQKWTIA*NFLLISINQPLKDL Trigger: AAGATCTTTCAAAGGTTGATTTATGCTGATAAGCAAGAAGTTCAAGGCGATGGTCCATTTCTGGATGGAATCAATGTTACTATAAGGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049453.9 |
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