RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE3B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029577

Ensembl transcript IDs: ENSMUST00000074002.12, ENSMUST00000130169.8, ENSMUST00000151809.3, ENSMUST00000196651.5

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCTCTTCACGGGGAGCACCGTCTGCGGTGAGGACGGCTGCGGTTaGACCGGGGCCGGCTCTGCATGCTCCAGCAGCTTCCTGCTCAGG +
Preference number: 1 (lower is better)
Translates to: RLFTGSTVCGEDGCG*TGAGSACSSSFLLR
Trigger: CCTGAGCAGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTGCAACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGTGAAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR GCA 90 bp GTCTGCGGTGAGGACGGCTGCGGTTGCACCGGGGCCGGCTCTGCATaGTCCAGCAGCTTCCTGCTCAGGATGTCACTGAAGAGAATGCGG +
Preference number: 1 (lower is better)
Translates to: VCGEDGCGCTGAGSA*SSSFLLRMSLKRMR
Trigger: CCGCATTCTCTTCAGTGACATCCTGAGCAGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTGCAACCGCAGCCGTCCTCACCGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CCA 90 bp CTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTaGCCTGCTGAGGACTTGGGAAGGAGGGCTGTGGTGTGGACCACC +
Preference number: 1 (lower is better)
Translates to: LMHRPGADSKGSLTA*PAEDLGRRAVVWTT
Trigger: GGTGGTCCACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp CTGTGCACGGGGCACAGGGCTCTGCGGGCAAGCTGGGAACACACATaGTTGGCAGACGTGAAGCTGGAGCCACCTTCCAGAACCCCAGGG +
Preference number: 1 (lower is better)
Translates to: LCTGHRALRASWEHT*LADVKLEPPSRTPG
Trigger: CCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGCCCCGTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp ACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTaGAGCTGGAGCCACCTTCCAGAACCCCAGGGGCTTTCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: TGLCGQAGNTHGWQT*SWSHLPEPQGLSWA
Trigger: GGCCCAGGAAAGCCCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp CGGCCCCCAACAGGCCTGAGGATGTTCCGAACCGAAGCCGACTTCTaGAACGCACGCTTGAGGAGGCTCTTCACGGGGAGCACCGTCTGC +
Preference number: 1 (lower is better)
Translates to: RPPTGLRMFRTEADF*NARLRRLFTGSTVC
Trigger: GCAGACGGTGCTCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGAACATCCTCAGGCCTGTTGGGGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CCA 90 bp GTGGACCACCTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTaGCCTCCCTGGCAGGAGCTGGGCTTGGTTGCCTGGGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: VDHLDPYRRDPDCAQ*PPWQELGLVAWEEA
Trigger: GGCCTCTTCCCAGGCAACCAAGCCCAGCTCCTGCCAGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAGGTGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp CCAGTGTCATTGTTCAGGCACTCCAGGAAGAGCTTGAGCCCGCCGTaGGGCCCCAGCTCACAGATAAACGCCCAGAGCTTGGGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PVSLFRHSRKSLSPP*GPSSQINAQSLGSR
Trigger: CCTGCTGCCCAAGCTCTGGGCGTTTATCTGTGAGCTGGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTGCCTGAACAATGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp CCTGGTCATCTGATACTTCCACACAGCGGATGGAGAACGGAGGCTTaGGGTAGGCGAATCCTAGGAGCGGGGGCCGGGAGCAGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: PGHLILPHSGWRTEA*GRRILGAGAGSSWS
Trigger: TGACCAGCTGCTCCCGGCCCCCGCTCCTAGGATTCGCCTACCTCAAGCCTCCGTTCTCCATCCGCTGTGTGGAAGTATCAGATGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp TGGCCTGCTGAGGACTTGGGAAGGAGGGCTGTGGTGTGGACCACCTaGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTGGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: WPAEDLGRRAVVWTT*IPIGETLTVLSGLP
Trigger: AGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp ACGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTaGTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: TATSHCAGSLGKAFS*FERCSPKLAPRSGG
Trigger: TCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp CTGACAGCGTGGCCTGCTGAGGACTTGGGAAGGAGGGCTGTGGTGTaGACCACCTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGT +
Preference number: 1 (lower is better)
Translates to: LTAWPAEDLGRRAVV*TTWIPIGETLTVLS
Trigger: ACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp AAGCGCCGGCGGCAGTCTCGCTCATACAGCACCATCAGCCAGCCATaGACGGACTGGAACAGCTCCAAGGTCTCACCCTTGGCATTCTCT +
Preference number: 1 (lower is better)
Translates to: KRRRQSRSYSTISQP*TDWNSSKVSPLAFS
Trigger: AGAGAATGCCAAGGGTGAGACCTTGGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCGAGACTGCCGCCGGCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp TTTCCTGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTaGGAACAGGGCACGGCCACTTCCCACTGTGCAGGCTCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: FPGPTPCSSPRSLLK*EQGTATSHCAGSLG
Trigger: CCCCAAGGAGCCTGCACAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp GTGCATGGAGGGCACTGTGTAGCATCCCCAACCTTGGGTGTCTCATaGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACT +
Preference number: 1 (lower is better)
Translates to: VHGGHCVASPTLGVS*LLRGSEGCGYPGHT
Trigger: AGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACAGTGCCCTCCATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp GAGGCAGGGACTTTGCTGTGCATAGAGGCTTGGCGAGGCCGTACCTaGGTTTTCAGAACGGAAGGAGGAGCTCACAGGCACAGGCCTTGT +
Preference number: 1 (lower is better)
Translates to: EAGTLLCIEAWRGRT*VFRTEGGAHRHRPC
Trigger: ACAAGGCCTGTGCCTGTGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATGCACAGCAAAGTCCCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp AGGTGCCGGGAACAGTCACAGAAGAGCATCAGCATGGCCAGGAGCTaGTTGGACTCTCCAGTGTCATTGTTCAGGCACTCCAGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: RCREQSQKSISMARS*LDSPVSLFRHSRKS
Trigger: GCTCTTCCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp CGGCAGTCTCGCTCATACAGCACCATCAGCCAGCCATGGACGGACTaGAACAGCTCCAAGGTCTCACCCTTGGCATTCTCTACAATTCCG +
Preference number: 1 (lower is better)
Translates to: RQSRSYSTISQPWTD*NSSKVSPLAFSTIP
Trigger: CGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCGAGACTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp AGACACCATCCTGGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTTaGCAAACTTCACTCGGATCACACCCTTCATGGCATGCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RHHPGQSQPRPPRGR*QTSLGSHPSWHAGK
Trigger: TTTCCCAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp TCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTaGTCTGTAATCACTAGGCCCAGGTCTCAGGCCCCACAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: SSEGKRRKPHRISRS*SVITRPRSQAPQGR
Trigger: TCTGCCCTGTGGGGCCTGAGACCTGGGCCTAGTGATTACAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp CAGGTTGGGAAAACCAGCCGAGCACAGGGTGCCAGTGGGTCAGGTTaGACTTCTTCTGAGCCACGTACTTCTGACAGTAGCACAGCATCT +
Preference number: 1 (lower is better)
Translates to: QVGKTSRAQGASGSG*TSSEPRTSDSSTAS
Trigger: AGATGCTGTGCTACTGTCAGAAGTACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTGGTTTTCCCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 90 bp AAGTCTTCCAGATCTATCTCAGCGTTGTCCCCGGAGATGAGGCGCTaGAGCTCAGGGGTAGAGAACATTCGGATCCACTCGGGCTTGATG +
Preference number: 1 (lower is better)
Translates to: KSSRSISALSPEMRR*SSGVENIRIHSGLM
Trigger: CATCAAGCCCGAGTGGATCCGAATGTTCTCTACCCCTGAGCTTCAGCGCCTCATCTCCGGGGACAACGCTGAGATAGATCTGGAAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp CCATCCATCTCTTCCTCTAACAGCCTGAGGCTGAGGGAGCCCAAGTaGAGGAGATTGCCCATGAGACACAGGGTATGGCAGCCTTCTAAA +
Preference number: 1 (lower is better)
Translates to: PSISSSNSLRLREPK*RRLPMRHRVWQPSK
Trigger: TTTAGAAGGCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGCACTTGGGCTCCCTCAGCCTCAGGCTGTTAGAGGAAGAGATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR GCA 90 bp TCCTGTAAGATCTCTGGCTTGAGCTGCCCCAGAAGCTCACAGCAGTaGCACAGGATGCTCTTGATCTGCTTAATCCACAGCAGCGTGAGG +
Preference number: 1 (lower is better)
Translates to: SCKISGLSCPRSSQQ*HRMLLICLIHSSVR
Trigger: CCTCACGCTGCTGTGGATTAAGCAGATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR TCA 90 bp GCGAGACCAGGCTGTGTTAGGAGAGCTCAAAGCCCGTGTTCATGCTaGTGGCATAGCGTAGTTTCTCTCGCAGTACGCTCTTCTTGCTGT +
Preference number: 1 (lower is better)
Translates to: ARPGCVRRAQSPCSC*WHSVVSLAVRSSCC
Trigger: ACAGCAAGAAGAGCGTACTGCGAGAGAAACTACGCTATGCCATCAGCATGAACACGGGCTTTGAGCTCTCCTAACACAGCCTGGTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp GGCTGGCCGAAGGCTCTCACCTTTTCCCCGGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCGTGAT +
Preference number: 1 (lower is better)
Translates to: GWPKALTFSPENLPC*SVCEGHKHGEVQRD
Trigger: ATCACGCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTGAGAGCCTTCGGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR GCA 90 bp TGGGTACAGCCGCTCATCCCCGCTGGTTGTCTTGAACAGGTTGAGTaGGGGGTCAAACACCCTCTTGATGATCTCTTCCAGAAACTCCTT +
Preference number: 1 (lower is better)
Translates to: WVQPLIPAGCLEQVE*GVKHPLDDLFQKLL
Trigger: AAGGAGTTTCTGGAAGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp GAAGAAGGAGGCAAAGGGCACATCTACCACGATCCCCTCATACACTaGCTTTCCCAGCATCTTCCCCACAAACTCGAAGAGCTGCAGGTA +
Preference number: 1 (lower is better)
Translates to: EEGGKGHIYHDPLIH*LSQHLPHKLEELQV
Trigger: TACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATCGTGGTAGATGTGCCCTTTGCCTCCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 90 bp AAACTCGAAGAGCTGCAGGTAATTCTCGTGAATGTAGGACGTGGGTaGTGGGTACAGCCGCTCATCCCCGCTGGTTGTCTTGAACAGGTT +
Preference number: 1 (lower is better)
Translates to: KLEELQVILVNVGRG*WVQPLIPAGCLEQV
Trigger: AACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCATCACCCACGTCCTACATTCACGAGAATTACCTGCAGCTCTTCGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 90 bp CTGACCCATGACGTCTTCATCGTAAGACAGCGTCAGCCCGAGGTCTaGGATGTCTCCATCGTAGCGCTTGATGGAGGTGAGGTTTTTATA +
Preference number: 1 (lower is better)
Translates to: LTHDVFIVRQRQPEV*DVSIVALDGGEVFI
Trigger: TATAAAAACCTCACCTCCATCAAGCGCTACGATGGAGACATCGCAGACCTCGGGCTGACGCTGTCTTACGATGAAGACGTCATGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 90 bp ACCCTCTTGATGATCTCTTCCAGAAACTCCTTGAAGACACCATCCTaGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTTGACAAACTTC +
Preference number: 1 (lower is better)
Translates to: TLLMISSRNSLKTPS*SIPASSTPRSLTNF
Trigger: GAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGCCTGCTGGGCTGTGGGTACCCTaGCCACACTCCTGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: LMHRPGADSKGSLTAWPAGLWVP*PHSWGL
Trigger: GAGCCCCCAGGAGTGTGGCCAGGGTACCCACAGCCC...AGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGACTGGGCTGTGGGTACCCTaGCCACACTCCTGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: FERCSPKLAPRSGGGARTGLWVP*PHSWGL
Trigger: GAGCCCCCAGGAGTGTGGCCAGGGTACCCACAGCCC...AGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCAGCACAGGCCAGGGGCTaGCAGCAAGGGTTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: ALRASWEHTWLADVKLEPAQARG*QQGFPD
Trigger: GTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGC...TGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp TCCAGGTACGTAAGACCTGTGAGGATCTGCAGGCGGATCTGGGTGAGGGTCGTCACGGGGAGCACCGTCTaGGGTGAGGACGGCTGCGGT +
Preference number: 2 (lower is better)
Translates to: SRYVRPVRICRRIWVRVVTGSTV*GEDGCG
Trigger: ACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGT...GACGACCCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCTTACGTACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp CTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGCCTGCTTGGGAAGGAGGGCTGTaGTGTGGACCACCTGGATCC +
Preference number: 2 (lower is better)
Translates to: LMHRPGADSKGSLTAWPAWEGGL*CGPPGS
Trigger: GGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCA...AGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCAACCCCTGCTTCCTTCTaGCGCCACCAGGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LALSAVALSWLHGVEEGPTPASF*RHQELL
Trigger: CAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGT...TGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp CTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGCTATTGAGAGGGTCTaGGGGCTGTGGGTACCCTGG +
Preference number: 2 (lower is better)
Translates to: LALSAVALSWLHGVEEGPAIERV*GLWVPW
Trigger: CCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGC...TGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCGACAGCGTGGCCTGCTaGGGACTTGGGAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGDSVAC*GLGKEG
Trigger: GCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTC...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp CGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCCGGGGCACAGGGCTCTaGGGGCAAGCTGGGAACACA +
Preference number: 2 (lower is better)
Translates to: RPLPTVQAPWGRRFLALSRGTGL*GQAGNT
Trigger: TGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGCCCCG...GCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTCAGCCGAGCACAGGGTaGCAGTGGGTCAGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: AQGSAGKLGTHMVGRREAQPSTG*QWVRLD
Trigger: GTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTG...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp GATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACCCCTGGCCACACTCCTaGGGGCTCTGTGGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: DVWDVSSAPRACQCKRTDPWPHS*GLCGSE
Trigger: CTCGCTACCACAGAGCCCCCAGGAGTGTGGCCAGGG...GTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCCCTGGCCACACTCCTaGGGGCTCTGTGGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGPWPHS*GLCGSE
Trigger: CTCGCTACCACAGAGCCCCCAGGAGTGTGGCCAGGG...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp AAAGCTGCCGGAGCTGTTCGTAGCCGTCCTCCAACATCCGGGACCTTCGGATGGCTCCCTGGCAGGAGCTaGGCTTGGTTGCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: KAAGAVRSRPPTSGTFGWLPGRS*AWLPGK
Trigger: CTTCCCAGGCAACCAAGCCCAGCTCCTGCCAGGGAG...CCATCCGAAGGTCCCGGATGTTGGAGGACGGCTACGAACAGCTCCGGCAGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTCTCCCTGGCAGGAGCTaGGCTTGGTTGCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: AQGSAGKLGTHMVGRREALPGRS*AWLPGK
Trigger: CTTCCCAGGCAACCAAGCCCAGCTCCTGCCAGGGAG...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGCCTGCTGAGGACTTaGGAAGGAGGGCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LALSAVALSWLHGVEEGPGLLRT*EGGLWC
Trigger: ACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCC...TGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp GGAGGGCACTGTGTAGCATCCCCAACCTTGGGTGTCTCATGGCTATaGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGHCVASPTLGVSWL*RGSEGCGYPGHTPG
Trigger: CCCAGGAGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACAGTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp CCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTaGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PLPTVQAPWGRRFLA*SAVALSWLHGVEEG
Trigger: CCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp AAGAGCATCAGCATGGCCAGGAGCTGCTTGGACTCTCCAGTGTCATaGTTCAGGCACTCCAGGAAGAGCTTGAGCCCGCCGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: KSISMARSCLDSPVS*FRHSRKSLSPPWGP
Trigger: GGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTGGAGATGAGATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAGCACAGGCCAGGGGCTaGCAGCAAGGGTTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: VEMRCVGRILSSQGLSVQAQARG*QQGFPD
Trigger: GTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGC...TTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATCTCATCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp CTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGCCTGCTCTGAGGGAGCCCAAGTaGAGGAGATTGCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: LMHRPGADSKGSLTAWPALREPK*RRLPMR
Trigger: TCTCATGGGCAATCTCCTGCACTTGGGCTCCCTCAG...AGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR GCA 90 bp GGCCGGGAGCAGCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGCACCGGGGCCGGCTCTaGATGCTCCAGCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GREQLVTNFRNMALSSGVHRGRL*MLQQLP
Trigger: AGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTG...CACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR GCA 90 bp AGGACACTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGACACCCTTCATGGCATaGTGGGAAAGCTGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: RTLMHRPGADSKGSLTAWTPFMA*WESCRS
Trigger: GCTCCGGCAGCTTTCCCAGCATGCCATGAAGGGTGT...CCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGCTGGCTCCACGGAGTaGAGGAGGGGCCAGGACTCC +
Preference number: 2 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGAGSTE*RRGQDS
Trigger: GGAGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGC...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCACCCCTGCTTCCTTCTaGCGCCACCAGGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGTPASF*RHQELL
Trigger: CAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGT...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp TGCTTGGACTCTCCAGTGTCATTGTTCAGGCACTCCAGGAAGAGCTaGAGCCCGCCGTGGGGCCCCAGCTCACAGATAAACGCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: CLDSPVSLFRHSRKS*SPPWGPSSQINAQS
Trigger: GCTCTGGGCGTTTATCTGTGAGCTGGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCGCTATTGAGAGGGTCTaGGGGCTGTGGGTACCCTGG +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGAIERV*GLWVPW
Trigger: CCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGC...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGACAGCGTGGCCTGCTaGGGACTTGGGAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SQAQALCPPQRAREESLTDSVAC*GLGKEG
Trigger: GCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTC...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTAAGACAGCGTCAGCCCGAGGTCTGCGATGTCTCCATCGTAGCGCTTGATGGACCCAAGCTAGGACACTaGTGCACAGGCCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VRQRQPEVCDVSIVALDGPKLGH*CTGQGL
Trigger: CAGCCCCTGGCCTGTGCATCAGTGTCCTAGCTTGGG...TCCATCAAGCGCTACGATGGAGACATCGCAGACCTCGGGCTGACGCTGTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp CACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGTGCTGCAGGACCAGCTaGGCCCTCCTTCGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: HRHRPCVLLRGQEKKASQCCRTS*ALLRSL
Trigger: CAAGGACCGAAGGAGGGCTCAGCTGGTCCTGCAGCA...CTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGACGGGGCACAGGGCTCTaGGGGCAAGCTGGGAACACA +
Preference number: 2 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGRGTGL*GQAGNT
Trigger: TGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGCCCCG...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp TCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCACCAGACCTGTGAGGATCTaGAGGCGGATCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SAGKLGTHMVGRREAGATRPVRI*RRIWVR
Trigger: CCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCT...GGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AAAGCTGCCGGAGCTGTTCGTAGCCGTCCTCCAACATCCGGGACCTTCGGATGGAGACCTGTGAGGATCTaGAGGCGGATCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: KAAGAVRSRPPTSGTFGWRPVRI*RRIWVR
Trigger: CCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCT...CCATCCGAAGGTCCCGGATGTTGGAGGACGGCTACGAACAGCTCCGGCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGACTTCTGTCCCCAGTGCATaGAGGGCACTGTGTAGCATC +
Preference number: 2 (lower is better)
Translates to: FERCSPKLAPRSGGGARTSVPSA*RALCSI
Trigger: GATGCTACACAGTGCCCTCCATGCACTGGGGACAGA...AGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GTGGAGATGAGATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAACTCCCTGGCAGGAGCTaGGCTTGGTTGCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: VEMRCVGRILSSQGLSVQLPGRS*AWLPGK
Trigger: CTTCCCAGGCAACCAAGCCCAGCTCCTGCCAGGGAG...TTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATCTCATCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp CCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCTaGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTAC +
Preference number: 2 (lower is better)
Translates to: PLSPVHGGHCVASPT*GVSWLLRGSEGCGY
Trigger: GTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGTGTGGACAGCGTGGCCTGCTaGGGACTTGGGAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GKENEVPDKRASANRGGVDSVAC*GLGKEG
Trigger: GCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTC...CACACCGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp CACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGCTGTGCTGCAGGACCAGCTaGGCCCTCCTTCGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: HPEVVDKLHSDHTLHGMLCCRTS*ALLRSL
Trigger: CAAGGACCGAAGGAGGGCTCAGCTGGTCCTGCAGCA...CAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp TCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCACCCCACCCCGAGGTCGTTaGCAAACTTCACTCGGATCA +
Preference number: 2 (lower is better)
Translates to: SAGKLGTHMVGRREAGATPPRGR*QTSLGS
Trigger: TGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGG...GGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AGGACACTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGAGGATGGTGATGAGGTaGCGGGAACAGTCACAGAAG +
Preference number: 2 (lower is better)
Translates to: RTLMHRPGADSKGSLTAWRMVMR*REQSQK
Trigger: CTTCTGTGACTGTTCCCGGCACCTCATCACCATCCT...CCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp GAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGTGTGGAGATGGCTCAGTGGCCTCCCTaGCAGGAGCTGGGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: ENEVPDKRASANRGGVEMAQWPP*QELGLV
Trigger: AACCAAGCCCAGCTCCTGCCAGGGAGGCCACTGAGC...CATCTCCACACCGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAAGCTTGAGCCCGCCGTaGGGCCCCAGCTCACAGATA +
Preference number: 2 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGSLSPP*GPSSQI
Trigger: TATCTGTGAGCTGGGGCCCCACGGCGGGCTCAAGCT...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp CATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCCAGGATATCCCAGAGCCAGATCCCAAGCTAGGACACTaGTGCACAGGCCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HGSFFRREVGSQDIPEPDPKLGH*CTGQGL
Trigger: CAGCCCCTGGCCTGTGCATCAGTGTCCTAGCTTGGG...ATCTGGCTCTGGGATATCCTGGCTTCCGACTTCACGCCTGAAGAAAGAGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCGCCACCAGGAGCTGCTaGGATGTCATCAAACAGCAG +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGATRSC*DVIKQQ
Trigger: CTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGC...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTGGAGATGAGATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAGCAGGAGATTGCCCATaGGACACAGGGTATGGCAGC +
Preference number: 2 (lower is better)
Translates to: VEMRCVGRILSSQGLSVQAGDCP*DTGYGS
Trigger: GCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGC...TTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATCTCATCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR TCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGTGATGTGGGTGACGTaGGGAGAGGCAGAGCTGGTC +
Preference number: 2 (lower is better)
Translates to: SQAQALCPPQRAREESLTVMWVT*GEAELV
Trigger: GACCAGCTCTGCCTCTCCTCACGTCACCCACATCAC...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGCTCTGTGTTACCTGTaGAGGCTGTGCACGGGGCAC +
Preference number: 2 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGALCYL*RLCTGH
Trigger: GTGCCCCGTGCACAGCCTGCACAGGTAACACAGAGC...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCCCCTGGCCACACTCCTaGGGGCTCTGTGGTAGCGAG +
Preference number: 2 (lower is better)
Translates to: AGHKLQEHGSFFRREVGSPWPHS*GLCGSE
Trigger: CTCGCTACCACAGAGCCCCCAGGAGTGTGGCCAGGG...GCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACATGGTTGGCAGACGTGAAGCTGGAGCCACCTTCCAGAACCCCAGGGGCTTTCTCTGTCCCCAGTGCATaGAGGGCACTGTGTAGCATC +
Preference number: 2 (lower is better)
Translates to: TWLADVKLEPPSRTPGAFSVPSA*RALCSI
Trigger: GATGCTACACAGTGCCCTCCATGCACTGGGGACAGA...GAAAGCCCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCTCAGTGGCCTCCCTaGCAGGAGCTGGGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: KTPASFWRHQELLRCHQTAQWPP*QELGLV
Trigger: AACCAAGCCCAGCTCCTGCCAGGGAGGCCACTGAGC...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GGAGGCAAAGGGCACATCTACCACGATCCCCTCATACACTGCCTTTCCCAGCATTGGGAAGGAGGGCTGTaGTGTGGACCACCTGGATCC +
Preference number: 2 (lower is better)
Translates to: GGKGHIYHDPLIHCLSQHWEGGL*CGPPGS
Trigger: GGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCA...ATGCTGGGAAAGGCAGTGTATGAGGGGATCGTGGTAGATGTGCCCTTTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCGCTGTATGGGAAGGAGGGCTGTaGTGTGGACCACCTGGATCC +
Preference number: 2 (lower is better)
Translates to: LPTVQAPWGRRFLALSAVWEGGL*CGPPGS
Trigger: GGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCA...TACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp AGGAGCTCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCCCTTCATGGCATGCTaGGAAAGCTGCCGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: RSSQAQALCPPQRAREESPFMAC*ESCRSC
Trigger: ACAGCTCCGGCAGCTTTCCCAGCATGCCATGAAGGG...GCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp CACTGTGGACAGGGTAGAGGCAGGGACTTTGCTGTGCATAGAGGCTaGGCGAGGCCGTACCTGAGTTTTCAGAACGGAAGGAGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: HCGQGRGRDFAVHRG*ARPYLSFQNGRRSS
Trigger: TGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATGCACAGCAAAGTCCCTGCCTCTACCCTGTCCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCTCTGTGTTACCTGTaGAGGCTGTGCACGGGGCAC +
Preference number: 2 (lower is better)
Translates to: KTPASFWRHQELLRCHQTALCYL*RLCTGH
Trigger: GTGCCCCGTGCACAGCCTGCACAGGTAACACAGAGC...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAACACCCTTCATGGCATaGTGGGAAAGCTGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: SQAQALCPPQRAREESLTTPFMA*WESCRS
Trigger: GCTCCGGCAGCTTTCCCAGCATGCCATGAAGGGTGT...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GCGCAGTGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACGGCCTGCTGAGGACTTaGGAAGGAGGGCTGTGGTGT +
Preference number: 2 (lower is better)
Translates to: AQCVGKENEVPDKRASANGLLRT*EGGLWC
Trigger: ACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCC...GTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGCTCTGCGGGCAAGCTaGGAACACACATGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: SQAQALCPPQRAREESLTALRAS*EHTWLA
Trigger: TGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGC...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCTTGAAGACACCATCCTaGTCAATCCCAGCCTCGTCC +
Preference number: 2 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGLKTPS*SIPASS
Trigger: GGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAA...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCGGGGCCGGGAGCAGCTaGTCACAAACTTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: PMLQPKIFAKVRTGHGHFGAGSS*SQTSGT
Trigger: TGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCCCC...GAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp AAGACACCATCCTGGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTaGACAAACTTCACTCGGATCACACCCTTCATGGCATGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: KTPSWSIPASSTPRS*TNFTRITPFMACWE
Trigger: TTCCCAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGTGTCTCATGGCTATTaGGAGGGTCTGAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGVSHGY*EGLRAV
Trigger: CACAGCCCTCAGACCCTCTCAATAGCCATGAGACAC...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp TCAGGGCTGGCCGAAGGCTCTCACCTTTTCCCCGGAGAATCTTCCATGTTGAAGGTAAGATCTCTGGCTTaGGCTGCCCCAGAAGCTCAC +
Preference number: 2 (lower is better)
Translates to: SGLAEGSHLFPGESSMLKVRSLA*AAPEAH
Trigger: GTGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTAC...CTTCAACATGGAAGATTCTCCGGGGAAAAGGTGAGAGCCTTCGGCCAGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR-3UTR GCA 90 bp TCTTTCTTCAGGCGTGAAGTCGGAAGCCAGGATATCCCAGAGCCAGATGATGACAAGACGCTGTGGTGGTaGCCGAGCATCTGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SFFRREVGSQDIPEPDDDKTLWW*PSIWLR
Trigger: CCTGAGCCAGATGCTCGGGCACCACCACAGCGTCTT...GTCATCATCTGGCTCTGGGATATCCTGGCTTCCGACTTCACGCCTGAAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CCATCCTGGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTTGACAAACTTCACTTGGGTACTCCAGAAATaGGCTGTTCTCCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: PSWSIPASSTPRSLTNFTWVLQK*AVLQGN
Trigger: GTTCCCCTGGAGAACAGCCCATTTCTGGAGTACCCA...AGTGAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp CTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCCACTGCAGCCATGGACGGACTaGAACAGCTCCAAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LQPKIFAKVRTGHGHFPLQPWTD*NSSKVS
Trigger: TGAGACCTTGGAGCTGTTCCAGTCCGTCCATGGCTG...CAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp CTTGGTGATCAGGTACATGGAATCATTGAGGCCGTAATCCACAGGTaGGGAAAACCAGCCGAGCACAGGGTGCCAGTGGGTCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LGDQVHGIIEAVIHR*GKPAEHRVPVGQVG
Trigger: TCCAACCTGACCCACTGGCACCCTGTGCTCGGCTGGTTTTCCCAACCTGTGGATTACGGCCTCAATGATTCCATGTACCTGATCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CAA 90 bp GGTGATGGGTACAGCCGCTCATCCCCGCTGGTTGTCTTGAACAGGTaGAGTGCGGGGTCAAACACCCTCTTGATGATCTCTTCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: GDGYSRSSPLVVLNR*SAGSNTLLMISSRN
Trigger: GTTTCTGGAAGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp CACAGGATGCTCTTGATCTGCTTAATCCACAGCAGCGTGAGGTCCTaGGAGAGAGCCAGGGACACGTACCACACCTTTGGCTCATTCTCG +
Preference number: 2 (lower is better)
Translates to: HRMLLICLIHSSVRS*ERARDTYHTFGSFS
Trigger: CGAGAATGAGCCAAAGGTGTGGTACGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCTGTGGATTAAGCAGATCAAGAGCATCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR-3UTR TCA 90 bp CTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCATCTGCCTCAACATCCTaGATCTGGAGAAAGTTCTTA +
Preference number: 2 (lower is better)
Translates to: LALSAVALSWLHGVEEGPSASTS*IWRKFL
Trigger: TAAGAACTTTCTCCAGATTCAGGATGTTGAGGCAGA...TGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGCCACCAGGAGCTGCTaGGATGTCATCAAACAGCAG +
Preference number: 2 (lower is better)
Translates to: VWEKRMRSQTKEQAPTEAATRSC*DVIKQQ
Trigger: CTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGC...CGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCTCTGAAACGCACGCTTaGGGAGGCTCTTCACGGGGA +
Preference number: 2 (lower is better)
Translates to: AGHKLQEHGSFFRREVGSSETHA*GGSSRG
Trigger: TCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGA...GCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR GCA 90 bp CGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCAGAATCTCCAGGAGTTaGTCTGTAATCACTAGGCCC +
Preference number: 2 (lower is better)
Translates to: RPLPTVQAPWGRRFLALSRISRS*SVITRP
Trigger: GGGCCTAGTGATTACAGAGCAACTCCTGGAGATTCT...GCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp ACATGGTTGGCAGACGTGAAGCTGGAGCCACCTTCCAGAACCCCAGGGGCTTTCAGAATCTCCAGGAGTTaGTCTGTAATCACTAGGCCC +
Preference number: 2 (lower is better)
Translates to: TWLADVKLEPPSRTPGAFRISRS*SVITRP
Trigger: GGGCCTAGTGATTACAGAGCAACTCCTGGAGATTCT...GAAAGCCCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp ACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCCAGGATATACCTGTGCAGGCTGTaGACGGGGCACAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TNFRNMALSSGVKSEARIYLCRL*TGHRAL
Trigger: CAGAGCCCTGTGCCCCGTGCACAGCCTGCACAGGTA...TATCCTGGCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TTCATCAGCCCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCTTACGAAGCATGTCATaGGACTCTAAAACGCCGAGG +
Preference number: 2 (lower is better)
Translates to: FISPLSPVHGGHCVASPTLRSMS*DSKTPR
Trigger: CCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAA...GGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGGGCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp CTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCGCTGTAAGAAGAGCATCAGCATaGCCAGGAGCTGCTTGGACT +
Preference number: 2 (lower is better)
Translates to: LPTVQAPWGRRFLALSAVRRASA*PGAAWT
Trigger: AGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCT...TACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATTGGGTACTCCAGAAATaGGCTGTTCTCCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: CFLLAPPGAAEMSSNSSYWVLQK*AVLQGN
Trigger: GTTCCCCTGGAGAACAGCCCATTTCTGGAGTACCCA...ATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACGATCCCCTCATACACTGCCTTTCCCAGCATCTTCCCCACAAACTCGAAGAGCCAGGAGCGCAGTGTGTaGGAAAAGAGAATGAGGTCC +
Preference number: 2 (lower is better)
Translates to: TIPSYTAFPSIFPTNSKSQERSV*EKRMRS
Trigger: GGACCTCATTCTCTTTTCCCACACACTGCGCTCCTG...GCTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCAGCACAGGGTGCCAGTaGGTCAGGTTGGACTTCTTC +
Preference number: 2 (lower is better)
Translates to: CVGKENEVPDKRASANRGSTGCQ*VRLDFF
Trigger: GAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCT...GCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp GCATCTTCCCCACAAACTCGAAGAGCTGCAGGTAATTCTCGTGAATGTAGGACGACCATCAGCCAGCCATaGACGGACTGGAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: ASSPQTRRAAGNSRECRTTISQP*TDWNSS
Trigger: GGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGT...CGTCCTACATTCACGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTACCATCAGCCAGCCATaGACGGACTGGAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: LCPPQRAREESLTESPGVTISQP*TDWNSS
Trigger: GGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGT...AACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCGGATCACACCCTTCATaGCATGCTGGGAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: AGHKLQEHGSFFRREVGSGSHPS*HAGKAA
Trigger: GGCAGCTTTCCCAGCATGCCATGAAGGGTGTGATCC...GCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp TCTTTCTTCAGGCGTGAAGTCGGAAGCCAGGATATCCCAGAGCCAGATGATGACCGTGAATGTAGGACGTaGGTGATGGGTACAGCCGCT +
Preference number: 2 (lower is better)
Translates to: SFFRREVGSQDIPEPDDDRECRT*VMGTAA
Trigger: AGCGGCTGTACCCATCACCCACGTCCTACATTCACG...GTCATCATCTGGCTCTGGGATATCCTGGCTTCCGACTTCACGCCTGAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp TTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGTGTCTCATGGCTATTaGGAGGGTCTGAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LCPPQRAREESLTESPGVVSHGY*EGLRAV
Trigger: CACAGCCCTCAGACCCTCTCAATAGCCATGAGACAC...AACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp CACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGCTGCCAGCTCTTCCAGCTTaGAGGAGATCTGTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: HPEVVDKLHSDHTLHGMLPALPA*RRSVLH
Trigger: ATGAAGAACAGATCTCCTTCAAGCTGGAAGAGCTGG...CAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGTCTGGTTTTTAATTTaGGTGTGCATTCGGAAATGC +
Preference number: 2 (lower is better)
Translates to: AQGSAGKLGTHMVGRREAVWFLI*VCIRKC
Trigger: GCATTTCCGAATGCACACTCAAATTAAAAACCAGAC...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACAGAATCTCCAGGAGTTaGTCTGTAATCACTAGGCCC +
Preference number: 2 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHRISRS*SVITRP
Trigger: GGGCCTAGTGATTACAGAGCAACTCCTGGAGATTCT...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ACATCTACCACGATCCCCTCATACACTGCCTTTCCCAGCATCTTCCCCACAAACTGGGTACTCCAGAAATaGGCTGTTCTCCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: TSTTIPSYTAFPSIFPTNWVLQK*AVLQGN
Trigger: GTTCCCCTGGAGAACAGCCCATTTCTGGAGTACCCA...GTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATCGTGGTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp GCATCTTCCCCACAAACTCGAAGAGCTGCAGGTAATTCTCGTGAATGTAGGACGGCCAGTGGGTCAGGTTaGACTTCTTCTGAGCCACGT +
Preference number: 2 (lower is better)
Translates to: ASSPQTRRAAGNSRECRTASGSG*TSSEPR
Trigger: ACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGC...CGTCCTACATTCACGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CCA 90 bp GAAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCGTGATGAGCCTGGAGCACGTACCACACCTTTaGCTCATTCTCGGCATCCAT +
Preference number: 2 (lower is better)
Translates to: EVSVKVTSMVRYSVMSLEHVPHL*LILGIH
Trigger: ATGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTG...CTCCAGGCTCATCACGCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR CAA 90 bp CCGCTGGTTGTCTTGAACAGGTTGAGTGCGGGGTCAAACACCCTCTaGATGATCTCTTCCAGAAACTCCTTGAAGACACCATCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: PLVVLNRLSAGSNTL*MISSRNSLKTPSWS
Trigger: TGACCAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTCAAACACCCTCTTGATGATCTCTTCCAGAAACTCCTTGAAGACACCATCCTGGTGTCTCATGGCTATTaGGAGGGTCTGAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VKHPLDDLFQKLLEDTILVSHGY*EGLRAV
Trigger: CACAGCCCTCAGACCCTCTCAATAGCCATGAGACAC...CAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAGAGGGTGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp GTCCACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGTCTGCCTCAACATCCTaGATCTGGAGAAAGTTCTTA +
Preference number: 2 (lower is better)
Translates to: VHPEVVDKLHSDHTLHGMSASTS*IWRKFL
Trigger: TAAGAACTTTCTCCAGATTCAGGATGTTGAGGCAGA...CATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AGAATCTTCCATGTTGAAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCATCTCTGGCTTGAGCTaGCCCAGAAGCTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: RIFHVEVSVKVTSMVRYSISGLS*PRSSQQ
Trigger: CTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGAT...GCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR-3UTR GCA 90 bp AAACACCCTCTTGATGATCTCTTCCAGAAACTCCTTGAAGACACCATCCTGGTCTGCTACGTGATGAGGTaGCGGGAACAGTCACAGAAG +
Preference number: 2 (lower is better)
Translates to: KHPLDDLFQKLLEDTILVCYVMR*REQSQK
Trigger: CTTCTGTGACTGTTCCCGGCACCTCATCACGTAGCA...GACCAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAGAGGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
3UTR-3UTR CCA 90 bp ATGCGCCATCAGATGGATGTAGCTAATTTTGTTCTCATCTGTAACCGGGATGGTTCTGTCCCCAGTGCATaGAGGGCACTGTGTAGCATC +
Preference number: 2 (lower is better)
Translates to: MRHQMDVANFVLICNRDGSVPSA*RALCSI
Trigger: GATGCTACACAGTGCCCTCCATGCACTGGGGACAGA...ACCATCCCGGTTACAGATGAGAACAAAATTAGCTACATCCATCTGATGGCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 90 bp GCATTCTCTACAATTCCGTCCCAGATCATCTTAAACACGAAGGAATaGAGGAACGAGGAGATGGTGACCAGCTCTTCCAGCTTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: AFSTIPSQIILNTKE*RNEEMVTSSSSLKE
Trigger: CTCCTTCAAGCTGGAAGAGCTGGTCACCATCTCCTCGTTCCTCAATTCCTTCGTGTTTAAGATGATCTGGGACGGAATTGTAGAGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR TCA 90 bp ACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAAGTCGGAAGCCAGGATACCAGCTCTTCCAGCTTaGAGGAGATCTGTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: TNFRNMALSSGVKSEARIPALPA*RRSVLH
Trigger: ATGAAGAACAGATCTCCTTCAAGCTGGAAGAGCTGG...TATCCTGGCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR GCA 90 bp AGAATCTTCCATGTTGAAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCAGAAGCTCACAGCAGTaGCACAGGATGCTCTTGATC +
Preference number: 2 (lower is better)
Translates to: RIFHVEVSVKVTSMVRYSRSSQQ*HRMLLI
Trigger: GATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCT...GCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR CAA 90 bp GATGGAACGGAAGCCACTGATAAGAGCAGCTGTCTGGTTTTTAATTaGAGTGTGCATTCGGAAATGCGCCATCAGATGGATGTAGCTAAT +
Preference number: 2 (lower is better)
Translates to: DGTEATDKSSCLVFN*SVHSEMRHQMDVAN
Trigger: ATTAGCTACATCCATCTGATGGCGCATTTCCGAATGCACACTCAAATTAAAAACCAGACAGCTGCTCTTATCAGTGGCTTCCGTTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GCACGCTTGAGGAGGCTCTTCACGGGGAGCACCGTCTaGGGTGAGGACGGCTGCGGTTGCACCGGGGCCGGC +
Preference number: 3 (lower is better)
Translates to: ARLRRLFTGSTV*GEDGCGCTGAG
Trigger: GCCGGCCCCGGTGCAACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGTGAAGAGCCTCCTCAAGCGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CCA 72 bp AGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTaGCCTGCTGAGGACTTGGGAAGGAGGGCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: RPGADSKGSLTA*PAEDLGRRAVV
Trigger: CACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GGGGCCAGGACTCCTCCATCAGGGTGGGAGGGAGACAAGAACCTGATGAGGCAGAGGAGCTGGGCTTGGTaGCCTGGGAAGAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: GARTPPSGWEGDKNLMRQRSWAW*PGKRPL
Trigger: CAGTGGCCTCTTCCCAGGCAACCAAGCCCAGCTCCT...CTGCCTCATCAGGTTCTTGTCTCCCTCCCACCCTGATGGAGGAGTCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TTCCAGAAACTCCTTGAAGACACCATCCTGGTCAATCCCAGCCTCGTCCACCCCCACTCCAGGAAGAGCTaGAGCCCGCCGTGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: FQKLLEDTILVNPSLVHPHSRKS*SPPWGP
Trigger: GGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTG...GGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAAGGAGTTTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp CCCAACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTaGGGGCTGTGGGTACCCTGGCCACACTCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PNLGCLMAIERV*GLWVPWPHSWG
Trigger: CCCCCAGGAGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp CTGATACTTCCACACAGCGGATGGAGAACGGAGGCTTaGGGTAGGCGAATCCTAGGAGCGGGGGCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: LILPHSGWRTEA*GRRILGAGAGS
Trigger: GCTCCCGGCCCCCGCTCCTAGGATTCGCCTACCTCAAGCCTCCGTTCTCCATCCGCTGTGTGGAAGTATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GGGTCGTCAGCGAGGTCTGGTAGAGCACGCAAATGTTaGAGACCTTCCGCACCTCAGCGGAGTCGACACGGC +
Preference number: 3 (lower is better)
Translates to: GSSARSGRARKC*RPSAPQRSRHG
Trigger: GCCGTGTCGACTCCGCTGAGGTGCGGAAGGTCTGCAACATTTGCGTGCTCTACCAGACCTCGCTGACGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CCA 72 bp CTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTaGCCTCCCTGGCAGGAGCTGGGCTTGGTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: LDPYRRDPDCAQ*PPWQELGLVAW
Trigger: CCAGGCAACCAAGCCCAGCTCCTGCCAGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp TGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTaGAGCTGGAGCCACCTTCCAGAACCCCAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: CGQAGNTHGWQT*SWSHLPEPQGL
Trigger: AAGCCCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp TGTTCCGAACCGAAGCCGACTTCTGAAACGCACGCTTaGGGAGGCTCTTCACGGGGAGCACCGTCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: CSEPKPTSETHA*GGSSRGAPSAV
Trigger: CACCGCAGACGGTGCTCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 72 bp AACATCCGGGACCTTCGGATGGTGATGTGGGTGACGTaGGGAGAGGCAGAGCTGGTCTCCACAAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: NIRDLRMVMWVT*GEAELVSTSPS
Trigger: GCTGGGGCTTGTGGAGACCAGCTCTGCCTCTCCTCACGTCACCCACATCACCATCCGAAGGTCCCGGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp TGTAACTCTCAGGCTCTGTGTTACCTGTGCAGGCTGTaGACGGGGCACAGGGCTCTGCGGGCAAGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: CNSQALCYLCRL*TGHRALRASWE
Trigger: TTCCCAGCTTGCCCGCAGAGCCCTGTGCCCCGTGCACAGCCTGCACAGGTAACACAGAGCCTGAGAGTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GGGGCCAGGACTCCTCCATCAGGGTGGGAGGGAGACAAGAACCTGATGAGGCAGGGTGTCTCATGGCTATaGAGAGGGTCTGAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: GARTPPSGWEGDKNLMRQGVSWL*RGSEGC
Trigger: ACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC...CTGCCTCATCAGGTTCTTGTCTCCCTCCCACCCTGATGGAGGAGTCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp ACAGGCCTGAGGATGTTCCGAACCGAAGCCGACTTCTaGAACGCACGCTTGAGGAGGCTCTTCACGGGGAGC +
Preference number: 3 (lower is better)
Translates to: TGLRMFRTEADF*NARLRRLFTGS
Trigger: GCTCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGAACATCCTCAGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 72 bp CTCCGGGAACCAGTTCGTGGCAGACGAGCTGACCCATaGCGTCTTCATCGTAAGACAGCGTCAGCCCGAGGT +
Preference number: 3 (lower is better)
Translates to: LREPVRGRRADP*RLHRKTASARG
Trigger: ACCTCGGGCTGACGCTGTCTTACGATGAAGACGTCATGGGTCAGCTCGTCTGCCACGAACTGGTTCCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp TCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTaGTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGG +
Preference number: 3 (lower is better)
Translates to: SHCAGSLGKAFS*FERCSPKLAPR
Trigger: CCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp TGGCCTGCTGAGGACTTGGGAAGGAGGGCTGTGGTGTaGACCACCTGGATCCCTATAGGAGAGACCCTGACT +
Preference number: 3 (lower is better)
Translates to: WPAEDLGRRAVV*TTWIPIGETLT
Trigger: AGTCAGGGTCTCTCCTATAGGGATCCAGGTGGTCCACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp GTGAATAGGGGGCAGATGCCCAGAGCGAGCAGGCTCTaGGTACTCCAGAAATGGGCTGTTCTCCAGGGGAAC +
Preference number: 3 (lower is better)
Translates to: VNRGQMPRASRL*VLQKWAVLQGN
Trigger: GTTCCCCTGGAGAACAGCCCATTTCTGGAGTACCCAGAGCCTGCTCGCTCTGGGCATCTGCCCCCTATTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CTGGGTGAGGGTCGTCAGCGAGGTCTGGTAGAGCACGCAAATGTTGCAGACCTTTCACAGGCACAGGCCTaGTGTCCTCCTCAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: LGEGRQRGLVEHANVADLSQAQA*CPPQRA
Trigger: TGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA...AAGGTCTGCAACATTTGCGTGCTCTACCAGACCTCGCTGACGACCCTCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GTCCACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGAGGAGCTGGGCTTGGTaGCCTGGGAAGAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: VHPEVVDKLHSDHTLHGMRSWAW*PGKRPL
Trigger: CAGTGGCCTCTTCCCAGGCAACCAAGCCCAGCTCCT...CATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGCTGAGGAGCTGGGCTTGGTaGCCTGGGAAGAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: HPEVVDKLHSDHTLHGMLRSWAW*PGKRPL
Trigger: CAGTGGCCTCTTCCCAGGCAACCAAGCCCAGCTCCT...CAGCATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTCACTCCAGGAAGAGCTaGAGCCCGCCGTGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: LCPPQRAREESLTESPGVHSRKS*SPPWGP
Trigger: GGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTG...AACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GCGCAGTGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACTGGCCTGCTGAGGACTaGGGAAGGAGGGCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: AQCVGKENEVPDKRASANWPAED*GRRAVV
Trigger: CACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCA...GTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCTCCACCCCGAGGTCGTaGACAAACTTCACTCGGATC +
Preference number: 3 (lower is better)
Translates to: RPLPTVQAPWGRRFLALSSTPRS*TNFTRI
Trigger: GATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGA...GCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp CCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTaGGAACAGGGCACGGCCACTTCCCACTGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: PTPCSSPRSLLK*EQGTATSHCAG
Trigger: GCCTGCACAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp GGGCACTGTGTAGCATCCCCAACCTTGGGTGTCTCATaGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCT +
Preference number: 3 (lower is better)
Translates to: GHCVASPTLGVS*LLRGSEGCGYP
Trigger: AGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACATCACAGGCACAGGCCTaGTGTCCTCCTCAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: KTPASFWRHQELLRCHQTSQAQA*CPPQRA
Trigger: TGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATGACATATGGCCTGCTGAGGACTaGGGAAGGAGGGCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: LLAPPGAAEMSSNSSYDIWPAED*GRRAVV
Trigger: CACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCA...TATGTCATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACCACTGTGCAGGCTCCTaGGGGAAGGCGTTTTCTTGC +
Preference number: 3 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHHCAGS*GKAFSC
Trigger: GCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTG...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGATGGCCAGGAGCTGCTaGGACTCTCCAGTGTCATTG +
Preference number: 3 (lower is better)
Translates to: HRHRPCVLLRGQEKKASQMARSC*DSPVSL
Trigger: CAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCAT...CTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GGCCGGGAGCAGCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGTCCACCCCGAGGTCGTaGACAAACTTCACTCGGATC +
Preference number: 3 (lower is better)
Translates to: GREQLVTNFRNMALSSGVSTPRS*TNFTRI
Trigger: GATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGA...CACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCTCTGTCCCCGCTGGTTGTCTaGAACAGGTTGAGTGCGGGG +
Preference number: 3 (lower is better)
Translates to: PPQRAREESLTESPGVALSPLVV*NRLSAG
Trigger: CCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGA...CAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GTTGAGATGGCCCATTATATTTGCGCAAATGTGGTTCAGGGCTGGCCGAAGGCTAGCAGCGTGAGGTCCTaGGAGAGAGCCAGGGACACG +
Preference number: 3 (lower is better)
Translates to: VEMAHYICANVVQGWPKASSVRS*ERARDT
Trigger: CGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCT...AGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCATCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR TCA 72 bp CCTGGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTTaGCAAACTTCACTCGGATCACACCCTTCATGGCAT +
Preference number: 3 (lower is better)
Translates to: PGQSQPRPPRGR*QTSLGSHPSWH
Trigger: ATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp TCTTCCTCTAACAGCCTGAGGCTGAGGGAGCCCAAGTaGAGGAGATTGCCCATGAGACACAGGGTATGGCAG +
Preference number: 3 (lower is better)
Translates to: SSSNSLRLREPK*RRLPMRHRVWQ
Trigger: CTGCCATACCCTGTGTCTCATGGGCAATCTCCTGCACTTGGGCTCCCTCAGCCTCAGGCTGTTAGAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR GCA 72 bp ATGCGGATGAGAGGCACCGCCCACAGGAACTGCAGCTaGTTGGTGATCAGGTACATGGAATCATTGAGGCCG +
Preference number: 3 (lower is better)
Translates to: MRMRGTAHRNCS*LVIRYMESLRP
Trigger: CGGCCTCAATGATTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCTGTGGGCGGTGCCTCTCATCCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR GCA 72 bp GACGTCTTCATCGTAAGACAGCGTCAGCCCGAGGTCTaGGATGTCTCCATCGTAGCGCTTGATGGAGGTGAG +
Preference number: 3 (lower is better)
Translates to: DVFIVRQRQPEV*DVSIVALDGGE
Trigger: CTCACCTCCATCAAGCGCTACGATGGAGACATCGCAGACCTCGGGCTGACGCTGTCTTACGATGAAGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp CGCTCATACAGCACCATCAGCCAGCCATGGACGGACTaGAACAGCTCCAAGGTCTCACCCTTGGCATTCTCT +
Preference number: 3 (lower is better)
Translates to: RSYSTISQPWTD*NSSKVSPLAFS
Trigger: AGAGAATGCCAAGGGTGAGACCTTGGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp CGAAGAGCTGCAGGTAATTCTCGTGAATGTAGGACGTaGGTGATGGGTACAGCCGCTCATCCCCGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: RRAAGNSRECRT*VMGTAAHPRWL
Trigger: CAACCAGCGGGGATGAGCGGCTGTACCCATCACCCACGTCCTACATTCACGAGAATTACCTGCAGCTCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CATAGAGGCTTGGCGAGGCCGTACCTGAGTTTTCAGAACGGAAGGAGGAGCTCAGGTGTCTCATGGCTATaGAGAGGGTCTGAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: HRGLARPYLSFQNGRRSSGVSWL*RGSEGC
Trigger: ACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC...TGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCTCACAGGCACAGGCCTaGTGTCCTCCTCAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: CVGKENEVPDKRASANRGSQAQA*CPPQRA
Trigger: TGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA...GCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGTAGAGGCAGGGACTTaGCTGTGCATAGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHVEAGT*LCIEAW
Trigger: CCAAGCCTCTATGCACAGCAAAGTCCCTGCCTCTAC...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GTCCACCCCGAGGTCGTTGACAAACTTCACTCGGATCACACCCTTCATGGCATGGTAGAGGCAGGGACTTaGCTGTGCATAGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: VHPEVVDKLHSDHTLHGMVEAGT*LCIEAW
Trigger: CCAAGCCTCTATGCACAGCAAAGTCCCTGCCTCTAC...CATGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCATGGCCAGGAGCTGCTaGGACTCTCCAGTGTCATTG +
Preference number: 3 (lower is better)
Translates to: PMLQPKIFAKVRTGHGHFMARSC*DSPVSL
Trigger: CAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCAT...GAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp TTTGCGCAAATGTGGTTCAGGGCTGGCCGAAGGCTCTCACCTTTTCCCCGGAGAACACGTACCACACCTTaGGCTCATTCTCGGCATCCA +
Preference number: 3 (lower is better)
Translates to: FAQMWFRAGRRLSPFPRRTRTTP*AHSRHP
Trigger: TGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTGT...TCTCCGGGGAAAAGGTGAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR TCA 72 bp ACTTTGCTGTGCATAGAGGCTTGGCGAGGCCGTACCTaGGTTTTCAGAACGGAAGGAGGAGCTCACAGGCAC +
Preference number: 3 (lower is better)
Translates to: TLLCIEAWRGRT*VFRTEGGAHRH
Trigger: GTGCCTGTGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATGCACAGCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp GAGCTGCAGGTAATTCTCGTGAATGTAGGACGTGGGTaGTGGGTACAGCCGCTCATCCCCGCTGGTTGTCTT +
Preference number: 3 (lower is better)
Translates to: ELQVILVNVGRG*WVQPLIPAGCL
Trigger: AAGACAACCAGCGGGGATGAGCGGCTGTACCCATCACCCACGTCCTACATTCACGAGAATTACCTGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp AGATCTATCTCAGCGTTGTCCCCGGAGATGAGGCGCTaGAGCTCAGGGGTAGAGAACATTCGGATCCACTCG +
Preference number: 3 (lower is better)
Translates to: RSISALSPEMRR*SSGVENIRIHS
Trigger: CGAGTGGATCCGAATGTTCTCTACCCCTGAGCTTCAGCGCCTCATCTCCGGGGACAACGCTGAGATAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTaGAAAAGGACGGACTCTGAAGTCCCTGGAATAAAG +
Preference number: 3 (lower is better)
Translates to: VWDVSSAPRACQ*KRTDSEVPGIK
Trigger: CTTTATTCCAGGGACTTCAGAGTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp CCGCTCATCCCCGCTGGTTGTCTTGAACAGGTTGAGTaGGGGGTCAAACACCCTCTTGATGATCTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: PLIPAGCLEQVE*GVKHPLDDLFQ
Trigger: CTGGAAGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CCA 72 bp AAAACCAGCCGAGCACAGGGTGCCAGTGGGTCAGGTTaGACTTCTTCTGAGCCACGTACTTCTGACAGTAGC +
Preference number: 3 (lower is better)
Translates to: KTSRAQGASGSG*TSSEPRTSDSS
Trigger: GCTACTGTCAGAAGTACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CAA 90 bp GTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGGTGTCTCATGGCTATaGAGAGGGTCTGAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: VWEKRMRSQTKEQAPTEAGVSWL*RGSEGC
Trigger: ACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC...CGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCGTAGCATCCCCAACCTaGGGTGTCTCATGGCTATTG +
Preference number: 3 (lower is better)
Translates to: PMLQPKIFAKVRTGHGHFVASPT*GVSWLL
Trigger: CAATAGCCATGAGACACCCAAGGTTGGGGATGCTAC...GAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp AGACAAGTGGCTACTAGCAGGTTACTAAGCCCTGGGCCTCTGCCTCAACATCCTGTAGAGGCAGGGACTTaGCTGTGCATAGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: RQVATSRLLSPGPLPQHPVEAGT*LCIEAW
Trigger: CCAAGCCTCTATGCACAGCAAAGTCCCTGCCTCTAC...AGGATGTTGAGGCAGAGGCCCAGGGCTTAGTAACCTGCTAGTAGCCACTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GGCCGGGAGCAGCTGGTCACAAACTTCAGGAACATGGCTCTTTCTTCAGGCGTGAGGAACTGCAGCTGCTaGGTGATCAGGTACATGGAA +
Preference number: 3 (lower is better)
Translates to: GREQLVTNFRNMALSSGVRNCSC*VIRYME
Trigger: TTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCT...CACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 72 bp GAGCCACGTACTTCTGACAGTAGCACAGCATCTGCGTaGGCGCGCTCACAAACCCATCCATCTCTTCCTCTA +
Preference number: 3 (lower is better)
Translates to: EPRTSDSSTASA*ARSQTHPSLPL
Trigger: TAGAGGAAGAGATGGATGGGTTTGTGAGCGCGCTCACGCAGATGCTGTGCTACTGTCAGAAGTACGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 72 bp ATAACCATGTTCCGGAACAGAAGAACTCTGTTCTTGTaGGGCACGACGTGGGGGATGTGCTGCAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: ITMFRNRRTLFL*GTTWGMCCRTS
Trigger: GCTGGTCCTGCAGCACATCCCCCACGTCGTGCCTCACAAGAACAGAGTTCTTCTGTTCCGGAACATGGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTaGTCTGTAATCACTAGGCCCAGGTCTCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: GKRRKPHRISRS*SVITRPRSQAP
Trigger: TGGGGCCTGAGACCTGGGCCTAGTGATTACAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GAACAGTCACAGAAGAGCATCAGCATGGCCAGGAGCTaGTTGGACTCTCCAGTGTCATTGTTCAGGCACTCC +
Preference number: 3 (lower is better)
Translates to: EQSQKSISMARS*LDSPVSLFRHS
Trigger: GGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCTGTGACTGTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp GGCAAAGGGCACATCTACCACGATCCCCTCATACACTaGCTTTCCCAGCATCTTCCCCACAAACTCGAAGAG +
Preference number: 3 (lower is better)
Translates to: GKGHIYHDPLIH*LSQHLPHKLEE
Trigger: CTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATCGTGGTAGATGTGCCCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp ATCTCTGGCTTGAGCTGCCCCAGAAGCTCACAGCAGTaGCACAGGATGCTCTTGATCTGCTTAATCCACAGC +
Preference number: 3 (lower is better)
Translates to: ISGLSCPRSSQQ*HRMLLICLIHS
Trigger: GCTGTGGATTAAGCAGATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR CCA 72 bp CCCAAGTGCAGGAGATTGCCCATGAGACACAGGGTATaGCAGCCTTCTAAACTCTCACAAGCATCGCGGCAT +
Preference number: 3 (lower is better)
Translates to: PKCRRLPMRHRV*QPSKLSQASRH
Trigger: ATGCCGCGATGCTTGTGAGAGTTTAGAAGGCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGCACTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR-3UTR CAA 90 bp GTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCGTAGCATCCCCAACCTaGGGTGTCTCATGGCTATTG +
Preference number: 3 (lower is better)
Translates to: VSSSEGKRRKPHRISRSCVASPT*GVSWLL
Trigger: CAATAGCCATGAGACACCCAAGGTTGGGGATGCTAC...GCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp GAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGTGTGGAGATGTCCAAGGTCTCACCCTaGGCATTCTCTACAATTCCG +
Preference number: 3 (lower is better)
Translates to: ENEVPDKRASANRGGVEMSKVSP*AFSTIP
Trigger: CGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGGA...CATCTCCACACCGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp GGCTGTGTTAGGAGAGCTCAAAGCCCGTGTTCATGCTaGTGGCATAGCGTAGTTTCTCTCGCAGTACGCTCT +
Preference number: 3 (lower is better)
Translates to: GCVRRAQSPCSC*WHSVVSLAVRS
Trigger: AGAGCGTACTGCGAGAGAAACTACGCTATGCCATCAGCATGAACACGGGCTTTGAGCTCTCCTAACACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR GCA 72 bp AAGAGAATGCGGATGAGAGGCACCGCCCACAGGAACTaGAGCTGCTTGGTGATCAGGTACATGGAATCATTG +
Preference number: 3 (lower is better)
Translates to: KRMRMRGTAHRN*SCLVIRYMESL
Trigger: CAATGATTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCTGTGGGCGGTGCCTCTCATCCGCATTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR GCA 72 bp AGAAGCTCACAGCAGTGCCACAGGATGCTCTTGATCTaGTTAATCCACAGCAGCGTGAGGTCCTTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: RSSQQCHRMLLI*LIHSSVRSLER
Trigger: TCTCTCCAAGGACCTCACGCTGCTGTGGATTAAGCAGATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR-3UTR CAA 90 bp ATGCGCCATCAGATGGATGTAGCTAATTTTGTTCTCATCTGTAACCGGGATGGTTGGCCTGCTGAGGACTaGGGAAGGAGGGCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: MRHQMDVANFVLICNRDGWPAED*GRRAVV
Trigger: CACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCA...ACCATCCCGGTTACAGATGAGAACAAAATTAGCTACATCCATCTGATGGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp AGGAGCTCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCAGCTTCTCTTTCTCCTaGATAACCATGTTCCGGAAC +
Preference number: 3 (lower is better)
Translates to: RSSQAQALCPPQRAREESSFSFS*ITMFRN
Trigger: GTTCCGGAACATGGTTATCAAGGAGAAAGAGAAGCT...GCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR-3UTR CAA 90 bp CGAAGGCTCTCACCTTTTCCCCGGAGAATCTTCCATGTTGAAGTGTCTGTGAAGTGTAAGATCTCTGGCTaGAGCTGCCCCAGAAGCTCA +
Preference number: 3 (lower is better)
Translates to: RRLSPFPRRIFHVEVSVKCKISG*SCPRSS
Trigger: TGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTACA...CTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTGAGAGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR GCA 72 bp AAACTTCAATGTCATCGAGGATGCTACGTGATGAGGTaGCGGGAACAGTCACAGAAGAGCATCAGCATGGCC +
Preference number: 3 (lower is better)
Translates to: KLQCHRGCYVMR*REQSQKSISMA
Trigger: GGCCATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCTCATCACGTAGCATCCTCGATGACATTGAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
3UTR CCA 72 bp ATGGCCCATTATATTTGCGCAAATGTGGTTCAGGGCTaGCCGAAGGCTCTCACCTTTTCCCCGGAGAATCTT +
Preference number: 3 (lower is better)
Translates to: MAHYICANVVQG*PKALTFSPENL
Trigger: AAGATTCTCCGGGGAAAAGGTGAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR-3UTR CAA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCTGTCTGGTTTTTAATTaGAGTGTGCATTCGGAAATG +
Preference number: 3 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGCLVFN*SVHSEM
Trigger: CATTTCCGAATGCACACTCAAATTAAAAACCAGACA...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR TCA 72 bp CATCGCGGCATCGGTCTCTATCTCTCAGGAAGACGATaGATTTACGAAGCATGTCATGGGACTCTAAAACGC +
Preference number: 3 (lower is better)
Translates to: HRGIGLYLSGRR*IYEACHGTLKR
Trigger: GCGTTTTAGAGTCCCATGACATGCTTCGTAAATTCATCGTCTTCCTGAGAGATAGAGACCGATGCCGCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR TCA 72 bp AAGGCTCTCACCTTTTCCCCGGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: KALTFSPENLPC*SVCEGHKHGEV
Trigger: TACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTGAGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
3UTR TCA 72 bp AAGCCACTGATAAGAGCAGCTGTCTGGTTTTTAATTTaGGTGTGCATTCGGAAATGCGCCATCAGATGGATG +
Preference number: 3 (lower is better)
Translates to: KPLIRAAVWFLI*VCIRKCAIRWM
Trigger: CATCCATCTGATGGCGCATTTCCGAATGCACACTCAAATTAAAAACCAGACAGCTGCTCTTATCAGTGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp AGGAGCTCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCGACAGGGCCGGGGCCTaGCCAGGCCTCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSSQAQALCPPQRAREESDRAGA*PGLGSA
Trigger: TGCTGACCCGAGGCCTGGCCAGGCCCCGGCCCTGTC...GCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
3UTR CAA 72 bp CGGTCCTTGTCGAGCTCCTGGAAGAGCACACCAGGCTaGAGGTCCCTCCGTAGCCAGTGGTCCTCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RSLSSSWKSTPG*RSLRSQWSSGA
Trigger: TGCTCCGGAGGACCACTGGCTACGGAGGGACCTCAAGCCTGGTGTGCTCTTCCAGGAGCTCGACAAGGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp CGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCACGGGGAGCACCGTCTaGGGTGAGGACGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RPLPTVQAPWGRRFLALSTGSTV*GEDGCG
Trigger: ACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGT...GCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp GGGGCCAGGACTCCTCCATCAGGGTGGGAGGGAGACAAGAACCTGATGAGGCAGGTGATGTGGGTGACGTaGGGAGAGGCAGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GARTPPSGWEGDKNLMRQVMWVT*GEAELV
Trigger: GACCAGCTCTGCCTCTCCTCACGTCACCCACATCAC...CTGCCTCATCAGGTTCTTGTCTCCCTCCCACCCTGATGGAGGAGTCCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR TCA 90 bp AAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGACTCCTCCATCAGGGTGGGAGCCACCCCGAGGTCGTTaGCAAACTTCACTCGGATCA +
Preference number: 4 (lower is better)
Translates to: KLAPRSGGGARTPPSGWEPPRGR*QTSLGS
Trigger: TGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGG...CTCCCACCCTGATGGAGGAGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp ACATGGTTGGCAGACGTGAAGCTGGAGCCACCTTCCAGAACCCCAGGGGCTTTCCACCGGGGCCGGCTCTaGATGCTCCAGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TWLADVKLEPPSRTPGAFHRGRL*MLQQLP
Trigger: AGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTG...GAAAGCCCCTGGGGTTCTGGAAGGTGGCTCCAGCTTCACGTCTGCCAACCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
3UTR CAA 72 bp AGCAAGGGTTCCCTGACAGCGTGGCCTGCTGAGGACTaGGGAAGGAGGGCTGTGGTGTGGACCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: SKGSLTAWPAED*GRRAVVWTTWI
Trigger: GATCCAGGTGGTCCACACCACAGCCCTCCTTCCCAAGTCCTCAGCAGGCCACGCTGTCAGGGAACCCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp GGGGCCAGGACTCCTCCATCAGGGTGGGAGGGAGACAAGAACCTGATGAGGCAGGCAGGAGATTGCCCATaGGACACAGGGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GARTPPSGWEGDKNLMRQAGDCP*DTGYGS
Trigger: GCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGC...CTGCCTCATCAGGTTCTTGTCTCCCTCCCACCCTGATGGAGGAGTCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp CGGCCACTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCTGCTGCAGGACCAGCTaGGCCCTCCTTCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPLPTVQAPWGRRFLALSCCRTS*ALLRSL
Trigger: CAAGGACCGAAGGAGGGCTCAGCTGGTCCTGCAGCA...GCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACTCAGCCGAGCACAGGGTaGCAGTGGGTCAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GVSWLLRGSEGCGYPGHTQPSTG*QWVRLD
Trigger: GTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTG...AGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp ACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAACGGGGAGCACCGTCTaGGGTGAGGACGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TGTGLVSSSEGKRRKPHRTGSTV*GEDGCG
Trigger: ACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGT...TCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp CTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGAGGGGCCACTGTTAACATGCCTTTaGACAGACAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LALSAVALSWLHGVEEGPLLTCL*TDRAGA
Trigger: GGCCCCGGCCCTGTCTGTCCAAAGGCATGTTAACAG...TGGCCCCTCCTCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp GGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACTAGCTTGAGCCCGCCGTaGGGCCCCAGCTCACAGATA +
Preference number: 4 (lower is better)
Translates to: GVSWLLRGSEGCGYPGHTSLSPP*GPSSQI
Trigger: TATCTGTGAGCTGGGGCCCCACGGCGGGCTCAAGCT...AGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR TCA 90 bp CATAGAGGCTTGGCGAGGCCGTACCTGAGTTTTCAGAACGGAAGGAGGAGCTCACTGGATCGTCACCGCTaGGCGCTCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HRGLARPYLSFQNGRRSSLDRHR*ALPLLL
Trigger: CAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAG...TGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp TGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATACTCCAGGAAGAGCTTaGGCCCGCCGTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CFLLAPPGAAEMSSNSSYTPGRA*ARRGAP
Trigger: TGGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGT...ATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCACTCTCTTCTCGTGCCTaGCGGGCTCTGTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: ALRASWEHTWLADVKLEPLSSRA*RALSMN
Trigger: GTTCATCGACAGAGCCCGGCAGGCACGAGAAGAGAG...TGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCGCTCCCGCTCCTTCTaGACCAGCCTCTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGRSRSF*TSLSSR
Trigger: ACGAGAAGAGAGGCTGGTGCAGAAGGAGCGGGAGCG...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp GATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACTCCGGCAGAGGAAACTaGGGACTAGGGCCTGGATCG +
Preference number: 4 (lower is better)
Translates to: DVWDVSSAPRACQCKRTDSGRGN*GLGPGS
Trigger: CGATCCAGGCCCTAGTCCGCAGTTTCCTCTGCCGGA...GTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp AGGACACTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGATCTCTGGCTTGAGCTaGCCCAGAAGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RTLMHRPGADSKGSLTAWISGLS*PRSSQQ
Trigger: CTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGAT...CCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACACACCGGGGCCGGCTCTaGATGCTCCAGCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SQAQALCPPQRAREESLTHRGRL*MLQQLP
Trigger: AGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTG...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp CTGATGCACAGGCCAGGGGCTGACAGCAAGGGTTCCCTGACAGCGTGGCCTGCTAGGATGGTGATGAGGTaGCGGGAACAGTCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LMHRPGADSKGSLTAWPARMVMR*REQSQK
Trigger: CTTCTGTGACTGTTCCCGGCACCTCATCACCATCCT...AGCAGGCCACGCTGTCAGGGAACCCTTGCTGTCAGCCCCTGGCCTGTGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
3UTR CAA 72 bp GAACAGGGCACGGCCACTTCCCACTGTGCAGGCTCCTaGGGGAAGGCGTTTTCTTGCTTTGAGCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EQGTATSHCAGS*GKAFSCFERCS
Trigger: GCTACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAGTGGCCGTGCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp AGCATGGCCAGGAGCTGCTTGGACTCTCCAGTGTCATaGTTCAGGCACTCCAGGAAGAGCTTGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SMARSCLDSPVS*FRHSRKSLSPP
Trigger: CGGCGGGCTCAAGCTCTTCCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp AGACAAGTGGCTACTAGCAGGTTACTAAGCCCTGGGCCTCTGCCTCAACATCCTCTGGATCGTCACCGCTaGGCGCTCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RQVATSRLLSPGPLPQHPLDRHR*ALPLLL
Trigger: CAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAG...AGGATGTTGAGGCAGAGGCCCAGGGCTTAGTAACCTGCTAGTAGCCACTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp CTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTGGCCTCCCTGGCAGGAGGTAAGATCTCTGGCTTaGGCTGCCCCAGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LDPYRRDPDCAQWPPWQEVRSLA*AAPEAH
Trigger: GTGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTAC...CTCCTGCCAGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp GCGGCAGTCTCGCTCATACAGCACCATCAGCCAGCCATGGACGGACTGGAACAGATCTCTGGCTTGAGCTaGCCCAGAAGCTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: AAVSLIQHHQPAMDGLEQISGLS*PRSSQQ
Trigger: CTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGAT...CTGTTCCAGTCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCGAGACTGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp CTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCCACTGCAGCCGAGCACAGGGTaGCAGTGGGTCAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LQPKIFAKVRTGHGHFPLQPSTG*QWVRLD
Trigger: GTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTG...CAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp TTCATCAGCCCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCACCGCCCACAGGAACTaGAGCTGCTTGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: FISPLSPVHGGHCVASPTTAHRN*SCLVIR
Trigger: CCTGATCACCAAGCAGCTGCAGTTCCTGTGGGCGGT...GGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGGGCTGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCACACCCTTCATGGCATaGTGGGAAAGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGTPFMA*WESCRS
Trigger: GCTCCGGCAGCTTTCCCAGCATGCCATGAAGGGTGT...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GTGGAGATGAGATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGACGCTGTGGTGGTaGCCGAGCATCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VEMRCVGRILSSQGLSVQKTLWW*PSIWLR
Trigger: CCTGAGCCAGATGCTCGGGCACCACCACAGCGTCTT...TTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATCTCATCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGCCAGTGGGTCAGGTTaGACTTCTTCTGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: AQGSAGKLGTHMVGRREAASGSG*TSSEPR
Trigger: ACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGC...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp TCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCACCAGCACAGGGTGCCAGTaGGTCAGGTTGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SAGKLGTHMVGRREAGATSTGCQ*VRLDFF
Trigger: GAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCT...GGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp TTCATCAGCCCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCCCCTTCATGGCATGCTaGGAAAGCTGCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FISPLSPVHGGHCVASPTPFMAC*ESCRSC
Trigger: ACAGCTCCGGCAGCTTTCCCAGCATGCCATGAAGGG...GGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGGGCTGATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp CCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCGCTCCCGCTCCTTCTaGACCAGCCTCTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PMLQPKIFAKVRTGHGHFRSRSF*TSLSSR
Trigger: ACGAGAAGAGAGGCTGGTGCAGAAGGAGCGGGAGCG...GAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp ATCTGCTTAATCCACAGCAGCGTGAGGTCCTTGGAGAGAGCCAGGGACACGTACTCCGGCAGAGGAAACTaGGGACTAGGGCCTGGATCG +
Preference number: 4 (lower is better)
Translates to: ICLIHSSVRSLERARDTYSGRGN*GLGPGS
Trigger: CGATCCAGGCCCTAGTCCGCAGTTTCCTCTGCCGGA...GTACGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCTGTGGATTAAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR GCA 90 bp GGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACTCTGAGGGAGCCCAAGTaGAGGAGATTGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: GVSWLLRGSEGCGYPGHTLREPK*RRLPMR
Trigger: TCTCATGGGCAATCTCCTGCACTTGGGCTCCCTCAG...AGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp AGGAGCTCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCAGACCTGTGAGGATCTaGAGGCGGATCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSSQAQALCPPQRAREESRPVRI*RRIWVR
Trigger: CCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCT...GCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp ACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCAGCCATGGACGGACTaGAACAGCTCCAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TLGVSWLLRGSEGCGYPGQPWTD*NSSKVS
Trigger: TGAGACCTTGGAGCTGTTCCAGTCCGTCCATGGCTG...GCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
3UTR CAA 72 bp TGTGTAGCATCCCCAACCTTGGGTGTCTCATGGCTATaGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CVASPTLGVSWL*RGSEGCGYPGH
Trigger: GTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp CCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCTaGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PVHGGHCVASPT*GVSWLLRGSEG
Trigger: GCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACAGTGCCCTCCATGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp ACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTaGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: TVQAPWGRRFLA*SAVALSWLHGV
Trigger: CACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp GGTGATGGGTACAGCCGCTCATCCCCGCTGGTTGTCTaGAACAGGTTGAGTGCGGGGTCAAACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GDGYSRSSPLVV*NRLSAGSNTLL
Trigger: CAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp AGCGTGATGAGCCTGGAGTCCTGTAAGATCTCTGGCTaGAGCTGCCCCAGAAGCTCACAGCAGTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SVMSLESCKISG*SCPRSSQQCHR
Trigger: CCTGTGGCACTGCTGTGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTACAGGACTCCAGGCTCATCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR TCA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACTCTGAAACGCACGCTTaGGGAGGCTCTTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHSETHA*GGSSRG
Trigger: TCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGA...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTAGAAGCTCACAGCAGTaGCACAGGATGCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: AQGSAGKLGTHMVGRREARSSQQ*HRMLLI
Trigger: GATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCT...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGAGGAGAGGCAGAGCTaGTCTCCACAAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KTPASFWRHQELLRCHQTEERQS*SPQAPA
Trigger: AGCTGGGGCTTGTGGAGACCAGCTCTGCCTCTCCTC...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp TTCATCAGCCCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCTTGAAGACACCATCCTaGTCAATCCCAGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FISPLSPVHGGHCVASPTLKTPS*SIPASS
Trigger: GGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAA...GGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGGGCTGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
3UTR CAA 72 bp TCCTGGTCAATCCCAGCCTCGTCCACCCCGAGGTCGTaGACAAACTTCACTCGGATCACACCCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: SWSIPASSTPRS*TNFTRITPFMA
Trigger: TGCCATGAAGGGTGTGATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp TTCCATGTTGAAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCGTGATGCTGGATCGTCACCGCTaGGCGCTCCCGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FHVEVSVKVTSMVRYSVMLDRHR*ALPLLL
Trigger: CAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAG...CATCACGCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR TCA 90 bp GCGCAGTGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACGCAGGAGATTGCCCATaGGACACAGGGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AQCVGKENEVPDKRASANAGDCP*DTGYGS
Trigger: GCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGC...GTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp TGTGTAGCATCCCCAACCTTGGGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGGAGAACGGAGGCTTaGGGTAGGCGAATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: CVASPTLGVSWLLRGSEGWRTEA*GRRILG
Trigger: TCCTAGGATTCGCCTACCTCAAGCCTCCGTTCTCCA...GCCCTCAGACCCTCTCAATAGCCATGAGACACCCAAGGTTGGGGATGCTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GTGATGAGGTGCCGGGAACAGTCACAGAAGAGCATCAGCATGGCCAGGAGCTGCAGAAGCTCACAGCAGTaGCACAGGATGCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: VMRCREQSQKSISMARSCRSSQQ*HRMLLI
Trigger: GATCAAGAGCATCCTGTGGCACTGCTGTGAGCTTCT...GCAGCTCCTGGCCATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCTCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp CCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCAGATTGTCTGAGAACTaGGCAGCAACCACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PMLQPKIFAKVRTGHGHFRLSEN*AATTGR
Trigger: GCGCCCTGTGGTTGCTGCGCAGTTCTCAGACAATCT...GAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp CACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATGTGGTTCAGGGCTaGCCGAAGGCTCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HRHRPCVLLRGQEKKASQNVVQG*PKALTF
Trigger: AAAGGTGAGAGCCTTCGGCCAGCCCTGAACCACATT...CTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp ACGATCCCCTCATACACTGCCTTTCCCAGCATCTTCCCCACAAACTCGAAGAGCCTGTTAACATGCCTTTaGACAGACAGGGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: TIPSYTAFPSIFPTNSKSLLTCL*TDRAGA
Trigger: GGCCCCGGCCCTGTCTGTCCAAAGGCATGTTAACAG...GCTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp CTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCCACTGGCCAGTGGGTCAGGTTaGACTTCTTCTGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: LQPKIFAKVRTGHGHFPLASGSG*TSSEPR
Trigger: ACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGC...CAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp ACCTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTGGCCTCCCTGGCAGGCCAAGGTCTCACCCTTaGCATTCTCTACAATTCCGT +
Preference number: 4 (lower is better)
Translates to: TWIPIGETLTVLSGLPGRPRSHP*HSLQFR
Trigger: ACGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGG...CCTGCCAGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp GTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGACCATCAGCCAGCCATaGACGGACTGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VWEKRMRSQTKEQAPTEATISQP*TDWNSS
Trigger: GGAGCTGTTCCAGTCCGTCCATGGCTGGCTGATGGT...CGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGAGGATCACACCCTTCATaGCATGCTGGGAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGGSHPS*HAGKAA
Trigger: GGCAGCTTTCCCAGCATGCCATGAAGGGTGTGATCC...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp CTTCCCACTGTGCAGGCTCCTTGGGGAAGGCGTTTTCTTGCTTTGAGCGCTGTACGTGAATGTAGGACGTaGGTGATGGGTACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LPTVQAPWGRRFLALSAVRECRT*VMGTAA
Trigger: AGCGGCTGTACCCATCACCCACGTCCTACATTCACG...TACAGCGCTCAAAGCAAGAAAACGCCTTCCCCAAGGAGCCTGCACAGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
3UTR CAA 72 bp TTTCAGAACGGAAGGAGGAGCTCACAGGCACAGGCCTaGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FQNGRRSSQAQA*CPPQRAREESL
Trigger: GAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCTCCTTCCGTTCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp CAGGTACATGGAATCATTGAGGCCGTAATCCACAGGTaGGGAAAACCAGCCGAGCACAGGGTGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QVHGIIEAVIHR*GKPAEHRVPVG
Trigger: ACCCACTGGCACCCTGTGCTCGGCTGGTTTTCCCAACCTGTGGATTACGGCCTCAATGATTCCATGTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
3UTR CAA 72 bp CAGTCACAGAAGAGCATCAGCATGGCCAGGAGCTGCTaGGACTCTCCAGTGTCATTGTTCAGGCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSQKSISMARSC*DSPVSLFRHSR
Trigger: CCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCTGTGACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp CTCTTGATCTGCTTAATCCACAGCAGCGTGAGGTCCTaGGAGAGAGCCAGGGACACGTACCACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLICLIHSSVRS*ERARDTYHTFG
Trigger: GCCAAAGGTGTGGTACGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCTGTGGATTAAGCAGATCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR TCA 90 bp CCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCTCTGGTAAGATCTCTGGCTTaGGCTGCCCCAGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPQRAREESLTESPGVALVRSLA*AAPEAH
Trigger: GTGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTAC...CAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp TCCAGGTACGTAAGACCTGTGAGGATCTGCAGGCGGATCTGGGTGAGGGTCGTCACTGCAGCTGCTTGGTaGTCAGGTACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: SRYVRPVRICRRIWVRVVTAAAW*SGTWNH
Trigger: ATGATTCCATGTACCTGATCACCAAGCAGCTGCAGT...GACGACCCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCTTACGTACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp TGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCCTCTCTTCTCGTGCCTaGCGGGCTCTGTCGATGAAC +
Preference number: 4 (lower is better)
Translates to: CVGKENEVPDKRASANRGLSSRA*RALSMN
Trigger: GTTCATCGACAGAGCCCGGCAGGCACGAGAAGAGAG...GCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACAGGCTGCTGTTAACATaGCTTTGGACAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHRLLLT*LWTDRA
Trigger: GGCCCTGTCTGTCCAAAGGCATGTTAACAGCAGCCT...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp TGGCCAGGAGCTGCTTGGACTCTCCAGTGTCATTGTTCAGGCACTCCAGGAAGAAGGCTGCTGTTAACATaGCTTTGGACAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: WPGAAWTLQCHCSGTPGRRLLLT*LWTDRA
Trigger: GGCCCTGTCTGTCCAAAGGCATGTTAACAGCAGCCT...TCTTCCTGGAGTGCCTGAACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp AGACAAGTGGCTACTAGCAGGTTACTAAGCCCTGGGCCTCTGCCTCAACATCCTAGATTGTCTGAGAACTaGGCAGCAACCACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RQVATSRLLSPGPLPQHPRLSEN*AATTGR
Trigger: GCGCCCTGTGGTTGCTGCGCAGTTCTCAGACAATCT...AGGATGTTGAGGCAGAGGCCCAGGGCTTAGTAACCTGCTAGTAGCCACTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp CTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATGACATAACCGCCCACAGGAACTaGAGCTGCTTGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: LLAPPGAAEMSSNSSYDITAHRN*SCLVIR
Trigger: CCTGATCACCAAGCAGCTGCAGTTCCTGTGGGCGGT...TATGTCATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp ACCTGGATCCCTATAGGAGAGACCCTGACTGTGCTCAGTGGCCTCCCTGGCAGGATGAGACACAGGGTATaGCAGCCTTCTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: TWIPIGETLTVLSGLPGRMRHRV*QPSKLS
Trigger: TGAGAGTTTAGAAGGCTGCCATACCCTGTGTCTCAT...CCTGCCAGGGAGGCCACTGAGCACAGTCAGGGTCTCTCCTATAGGGATCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CCA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAAGCACAGGGTGCCAGTaGGTCAGGTTGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTPASFWRHQELLRCHQTSTGCQ*VRLDFF
Trigger: GAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCT...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
3UTR CAA 72 bp TACAGCCGCTCATCCCCGCTGGTTGTCTTGAACAGGTaGAGTGCGGGGTCAAACACCCTCTTGATGATCTCT +
Preference number: 4 (lower is better)
Translates to: YSRSSPLVVLNR*SAGSNTLLMIS
Trigger: AGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp CTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCCACTGCATCAATCTCTTTCCTaGTGTCTCTGTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: LQPKIFAKVRTGHGHFPLHQSLS*CLCAVA
Trigger: GGCGACTGCACAGAGACATCAGGAAAGAGATTGATG...CAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp AAGGCGTTTTCTTGCTTTGAGCGCTGTAGCCCTAAGCTGGCTCCACGGAGTGGACATCAATCTCTTTCCTaGTGTCTCTGTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: KAFSCFERCSPKLAPRSGHQSLS*CLCAVA
Trigger: GGCGACTGCACAGAGACATCAGGAAAGAGATTGATG...TCCACTCCGTGGAGCCAGCTTAGGGCTACAGCGCTCAAAGCAAGAAAACGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp AGGAGCTCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCACTGCAGCTGCTTGGTaGTCAGGTACATGGAATCAT +
Preference number: 4 (lower is better)
Translates to: RSSQAQALCPPQRAREESTAAAW*SGTWNH
Trigger: ATGATTCCATGTACCTGATCACCAAGCAGCTGCAGT...GCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp ATGTCACTGAAGAGAATGCGGATGAGAGGCACCGCCCACAGGAACTGCAGCTGCTCTGTCGATGAACCATaGTCTGGAGGTCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: MSLKRMRMRGTAHRNCSCSVDEP*SGGLRY
Trigger: GTATCTCAGACCTCCAGAGCATGGTTCATCGACAGA...GCAGCTGCAGTTCCTGTGGGCGGTGCCTCTCATCCGCATTCTCTTCAGTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp CGGAGAATCTTCCATGTTGAAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACCGCTCCCGCTCCTTCTaGACCAGCCTCTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RRIFHVEVSVKVTSMVRYRSRSF*TSLSSR
Trigger: ACGAGAAGAGAGGCTGGTGCAGAAGGAGCGGGAGCG...GTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR GCA 90 bp GAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCTCTGTAATCACTTCCGGCAGAGGAAACTaGGGACTAGGGCCTGGATCG +
Preference number: 4 (lower is better)
Translates to: EGKRRKPHRISRSCSVITSGRGN*GLGPGS
Trigger: CGATCCAGGCCCTAGTCCGCAGTTTCCTCTGCCGGA...AGTGATTACAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACCACGTACCACACCTTTaGCTCATTCTCGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHHVPHL*LILGIH
Trigger: ATGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTG...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACACACGTACCACACCTTTaGCTCATTCTCGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: SQAQALCPPQRAREESLTHVPHL*LILGIH
Trigger: ATGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTG...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp GTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCAGAAGAGCATCAGCATaGCCAGGAGCTGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: VSSSEGKRRKPHRISRSCRRASA*PGAAWT
Trigger: AGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCT...GCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
3UTR CAA 72 bp AGCTCAGGGGTAGAGAACATTCGGATCCACTCGGGCTaGATGATGGAACGGAAGCCACTGATAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGVENIRIHSG*MMERKPLIRAA
Trigger: AGCTGCTCTTATCAGTGGCTTCCGTTCCATCATCAAGCCCGAGTGGATCCGAATGTTCTCTACCCCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp ACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGACCAGCTCTTCCAGCTTaGAGGAGATCTGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGTGLVSSSEGKRRKPHRPALPA*RRSVLH
Trigger: ATGAAGAACAGATCTCCTTCAAGCTGGAAGAGCTGG...TCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp CTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACGGCCACTTCCCACTGTCTGTCGATGAACCATaGTCTGGAGGTCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: LQPKIFAKVRTGHGHFPLSVDEP*SGGLRY
Trigger: GTATCTCAGACCTCCAGAGCATGGTTCATCGACAGA...CAGTGGGAAGTGGCCGTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp ACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGACCATGCTGTTCAGGATaGTTCGACACAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGTGLVSSSEGKRRKPHRPCCSG*FDTTSP
Trigger: TGGAGAAGTTGTGTCGAAGCATCCTGAACAGCATGG...TCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CCA 90 bp ACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGACCACGCTGGTTGAGATaGCCCATTATATTTGCGCAA +
Preference number: 4 (lower is better)
Translates to: TGTGLVSSSEGKRRKPHRPRWLR*PIIFAQ
Trigger: TTGCGCAAATATAATGGGCCATCTCAACCAGCGTGG...TCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR TCA 90 bp TGGGCCTACCCCATGCTCCAGCCCAAGATCTTTGCTAAAGTGAGAACAGGGCACAAAGTCCACGCTGGTTaGGATGGCCCATTATATTTG +
Preference number: 4 (lower is better)
Translates to: WAYPMLQPKIFAKVRTGHKVHAG*DGPLYL
Trigger: CAAATATAATGGGCCATCTCAACCAGCGTGGACTTT...GTGCCCTGTTCTCACTTTAGCAAAGATCTTGGGCTGGAGCATGGGGTAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR TCA 90 bp CTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATGACATAAGCCCGTGTTCATGCTaGTGGCATAGCGTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLAPPGAAEMSSNSSYDISPCSC*WHSVVS
Trigger: AGAAACTACGCTATGCCATCAGCATGAACACGGGCT...TATGTCATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR TCA 90 bp CGAAGGCTCTCACCTTTTCCCCGGAGAATCTTCCATGTTGAAGTGTCTGTGAAGAACTTCTCCAGTCTCTaGTGTCTCTGTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: RRLSPFPRRIFHVEVSVKNFSSL*CLCAVA
Trigger: GGCGACTGCACAGAGACATCAGAGACTGGAGAAGTT...CTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTGAGAGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR GCA 90 bp ATGGCCCATTATATTTGCGCAAATGTGGTTCAGGGCTGGCCGAAGGCTCTCACCTCTGTCGATGAACCATaGTCTGGAGGTCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: MAHYICANVVQGWPKALTSVDEP*SGGLRY
Trigger: GTATCTCAGACCTCCAGAGCATGGTTCATCGACAGA...GGTGAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS-3UTR GCA 90 bp GTCATCGAGGATGGTGATGAGGTGCCGGGAACAGTCACAGAAGAGCATCAGCATCCATGCTGTTCAGGATaGTTCGACACAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VIEDGDEVPGTVTEEHQHPCCSG*FDTTSP
Trigger: TGGAGAAGTTGTGTCGAAGCATCCTGAACAGCATGG...ATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCTCATCACCATCCTCGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR GCA 90 bp GAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCTCTGTAATCACTCTGAGGGAGCCCAAGTaGAGGAGATTGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: EGKRRKPHRISRSCSVITLREPK*RRLPMR
Trigger: TCTCATGGGCAATCTCCTGCACTTGGGCTCCCTCAG...AGTGATTACAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR GCA 90 bp TTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGATCCCCTCATACACTaGCTTTCCCAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCPPQRAREESLTESPGVDPLIH*LSQHLP
Trigger: GGGAAGATGCTGGGAAAGGCAGTGTATGAGGGGATC...AACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp CCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTACGAAGCATGTCATaGGACTCTAAAACGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PCVLLRGQEKKASQNLQELRSMS*DSKTPR
Trigger: CCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAA...CTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CCA 90 bp ACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACAGAATGAGACACAGGGTATaGCAGCCTTCTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: TGTGLVSSSEGKRRKPHRMRHRV*QPSKLS
Trigger: TGAGAGTTTAGAAGGCTGCCATACCCTGTGTCTCAT...TCTGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp AGACAAGTGGCTACTAGCAGGTTACTAAGCCCTGGGCCTCTGCCTCAACATCCTGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RQVATSRLLSPGPLPQHPENLPC*SVCEGH
Trigger: GTGACCTTCACAGACACTTCAACATGGAAGATTCTC...AGGATGTTGAGGCAGAGGCCCAGGGCTTAGTAACCTGCTAGTAGCCACTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
3UTR CAA 72 bp GAGCTGGTCTCCACAAGCCCCAGCTTCTCTTTCTCCTaGATAACCATGTTCCGGAACAGAAGAACTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ELVSTSPSFSFS*ITMFRNRRTLF
Trigger: GAACAGAGTTCTTCTGTTCCGGAACATGGTTATCAAGGAGAAAGAGAAGCTGGGGCTTGTGGAGACCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
3UTR CAA 72 bp GTCTTGAACAGGTTGAGTGCGGGGTCAAACACCCTCTaGATGATCTCTTCCAGAAACTCCTTGAAGACACCA +
Preference number: 4 (lower is better)
Translates to: VLNRLSAGSNTL*MISSRNSLKTP
Trigger: TGGTGTCTTCAAGGAGTTTCTGGAAGAGATCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130169.8
ENSMUST00000196651.5
CDS-3UTR TCA 90 bp CTCACAAGCATCGCGGCATCGGTCTCTATCTCTCAGGAAGACGATGAATTTACGGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LTSIAASVSISQEDDEFTENLPC*SVCEGH
Trigger: GTGACCTTCACAGACACTTCAACATGGAAGATTCTC...CGTAAATTCATCGTCTTCCTGAGAGATAGAGACCGATGCCGCGATGCTTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR TCA 90 bp GCGCAGTGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACGTCTGGTTTTTAATTTaGGTGTGCATTCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: AQCVGKENEVPDKRASANVWFLI*VCIRKC
Trigger: GCATTTCCGAATGCACACTCAAATTAAAAACCAGAC...GTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACACTGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR GCA 90 bp GAGGGCAAGAGAAGAAAGCCTCACAGAATCTCCAGGAGTTGCTCTGTAATCACTATGGCCCATTATATTTaGGCAAATGTGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGKRRKPHRISRSCSVITMAHYI*ANVVQG
Trigger: GCCCTGAACCACATTTGCGCAAATATAATGGGCCAT...AGTGATTACAGAGCAACTCCTGGAGATTCTGTGAGGCTTTCTTCTCTTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS GCA 90 bp GGAGGCTCACTCTTCACGGGGAGCACCGTCTGCGGTGAGGACGGCTaGGGTTGCACCGGGGCCGGCTCTGCATGCTCCAGCAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GGSLFTGSTVCGEDG*GCTGAGSACSSSFL
Trigger: CAGGAAGCTGCTGGAGCATGCAGAGCCGGCCCCGGTGCAACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGTGAAGAGTGAGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
CDS GCA 90 bp CGGACTAGGGCCTGGATCGTCACCGCTGAGCGCTCCCGCTCCTTCTaGACCAGCCTCTCTTCTCGTGCCTGCCGGGCTCTGTCGATGAAC +
Preference number: 5 (lower is better)
Translates to: RTRAWIVTAERSRSF*TSLSSRACRALSMN
Trigger: GTTCATCGACAGAGCCCGGCAGGCACGAGAAGAGAGGCTGGTGCAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAGGCCCTAGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000151809.3
CDS CCA 90 bp TCTCTGTGCAGTCGCCTCCGGCAGAGGAAACTGCGGACTAGGGCCTaGATCGTCACCGCTGAGCGCTCCCGCTCCTTCTGCACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SLCSRLRQRKLRTRA*IVTAERSRSFCTSL
Trigger: GAGGCTGGTGCAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAGGCCCTAGTCCGCAGTTTCCTCTGCCGGAGGCGACTGCACAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000151809.3
CDS-3UTR CAA 90 bp TCCTCCGGAGCAAAGCGCCGGCGGCAGTCTCGCTCATACAGCACCATCAGCCAGAGCAGCGTGAGGTCCTaGGAGAGAGCCAGGGACACG +
Preference number: 5 (lower is better)
Translates to: SSGAKRRRQSRSYSTISQSSVRS*ERARDT
Trigger: CGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCT...CTGGCTGATGGTGCTGTATGAGCGAGACTGCCGCCGGCGCTTTGCTCCGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS TCA 90 bp CGGCCCCCAACAGGCCTGAGGATGTTCCGAACCGAAGCCGACTTCTaGAACGCACGCTTGAGGAGGCTCACTCTTCACGGGGAGCACCGT +
Preference number: 5 (lower is better)
Translates to: RPPTGLRMFRTEADF*NARLRRLTLHGEHR
Trigger: ACGGTGCTCCCCGTGAAGAGTGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGAACATCCTCAGGCCTGTTGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
CDS-3UTR CAA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACACACTCCAGGAAGAGCTaGAGCCCGCCGTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SQAQALCPPQRAREESLTHSRKS*SPPWGP
Trigger: GGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTG...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp CCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACTCTGAAGTCCCTGGAACCCCCTGGCTCCCTCTaGCGGATGGTGAAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PQLPGPVSAKGRTLKSLEPPGSL*RMVKKP
Trigger: GGGCTTCTTCACCATCCGCAAGAGGGAGCCAGGGGG...TTCCAGGGACTTCAGAGTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp CCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACTCTGAAGTCCCTGGAAAGCAGCGTGAGGTCCTaGGAGAGAGCCAGGGACACG +
Preference number: 5 (lower is better)
Translates to: PQLPGPVSAKGRTLKSLESSVRS*ERARDT
Trigger: CGTGTCCCTGGCTCTCTCCAAGGACCTCACGCTGCT...TTCCAGGGACTTCAGAGTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp TCCTCCGGAGCAAAGCGCCGGCGGCAGTCTCGCTCATACAGCACCATCAGCCAGACACGTACCACACCTTaGGCTCATTCTCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: SSGAKRRRQSRSYSTISQTRTTP*AHSRHP
Trigger: TGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTGT...CTGGCTGATGGTGCTGTATGAGCGAGACTGCCGCCGGCGCTTTGCTCCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp AAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGACTCCTCCATCAGGGTGGGAGTGCCACAGGATGCTCTaGATCTGCTTAATCCACAGC +
Preference number: 5 (lower is better)
Translates to: KLAPRSGGGARTPPSGWECHRML*ICLIHS
Trigger: GCTGTGGATTAAGCAGATCAAGAGCATCCTGTGGCA...CTCCCACCCTGATGGAGGAGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp AAGCTGGCTCCACGGAGTGGAGGAGGGGCCAGGACTCCTCCATCAGGGTGGGAGGATGGCCCATTATATTaGCGCAAATGTGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: KLAPRSGGGARTPPSGWEDGPLY*RKCGSG
Trigger: CCCTGAACCACATTTGCGCAAATATAATGGGCCATC...CTCCCACCCTGATGGAGGAGTCCTGGCCCCTCCTCCACTCCGTGGAGCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp ATGTCACTGAAGAGAATGCGGATGAGAGGCACCGCCCACAGGAACTGCAGCTGCGCTGTTAACATGCCTTaGGACAGACAGGGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: MSLKRMRMRGTAHRNCSCAVNMP*DRQGRG
Trigger: GCCCCGGCCCTGTCTGTCCAAAGGCATGTTAACAGC...GCAGCTGCAGTTCCTGTGGGCGGTGCCTCTCATCCGCATTCTCTTCAGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp TCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTGGAGCCACCACACGTACCACACCTTaGGCTCATTCTCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: SAGKLGTHMVGRREAGATTRTTP*AHSRHP
Trigger: TGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTGT...GGTGGCTCCAGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp GGGGCCAGGACTCCTCCATCAGGGTGGGAGGGAGACAAGAACCTGATGAGGCAGTCCAAGGTCTCACCCTaGGCATTCTCTACAATTCCG +
Preference number: 5 (lower is better)
Translates to: GARTPPSGWEGDKNLMRQSKVSP*AFSTIP
Trigger: CGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGGA...CTGCCTCATCAGGTTCTTGTCTCCCTCCCACCCTGATGGAGGAGTCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp GCGCAGTGTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACGCTGTTAACATGCCTTaGGACAGACAGGGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: AQCVGKENEVPDKRASANAVNMP*DRQGRG
Trigger: GCCCCGGCCCTGTCTGTCCAAAGGCATGTTAACAGC...GTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACACACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACATCCCCGCTGGTTGTCTaGAACAGGTTGAGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: KTPASFWRHQELLRCHQTSPLVV*NRLSAG
Trigger: CCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGA...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp GTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACTCTAGGAACTGCAGCTGCTaGGTGATCAGGTACATGGAA +
Preference number: 5 (lower is better)
Translates to: VWDVSSAPRACQCKRTDSRNCSC*VIRYME
Trigger: TTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCT...AGAGTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS-3UTR CAA 90 bp CATAGAGGCTTGGCGAGGCCGTACCTGAGTTTTCAGAACGGAAGGAGGAGCTCAATGGCCAGGAGCTGCTaGGACTCTCCAGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: HRGLARPYLSFQNGRRSSMARSC*DSPVSL
Trigger: CAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCAT...TGAGCTCCTCCTTCCGTTCTGAAAACTCAGGTACGGCCTCGCCAAGCCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp TCACAGGCACAGGCCTTGTGTCCTCCTCAGAGGGCAAGAGAAGAAAGCCTCACATCCACCCCGAGGTCGTaGACAAACTTCACTCGGATC +
Preference number: 5 (lower is better)
Translates to: SQAQALCPPQRAREESLTSTPRS*TNFTRI
Trigger: GATCCGAGTGAAGTTTGTCAACGACCTCGGGGTGGA...TGTGAGGCTTTCTTCTCTTGCCCTCTGAGGAGGACACAAGGCCTGTGCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACACGGATCCACTCGGGCTaGATGATGGAACGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KTPASFWRHQELLRCHQTRIHSG*MMERKP
Trigger: TGGCTTCCGTTCCATCATCAAGCCCGAGTGGATCCG...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS GCA 90 bp GAGCCAGGGACACGTACCACACCTTTGGCTCATTCTCGGCATCCATaGTGTTCAGGATGCTTCGACACAACTTCTCCAGTCTCTCGCTGT +
Preference number: 5 (lower is better)
Translates to: EPGTRTTPLAHSRHP*CSGCFDTTSPVSRC
Trigger: ACAGCGAGAGACTGGAGAAGTTGTGTCGAAGCATCCTGAACAGCATGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTGTCCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS CCA 90 bp CGGTCTCTATCTCTCAGGAAGACGATGAATTTACGAAGCATGTCATaGGACTCTAAAACGCCGAGGCGCTCAGGGGCCACGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: RSLSLRKTMNLRSMS*DSKTPRRSGATVLR
Trigger: TCTCAGCACCGTGGCCCCTGAGCGCCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAAATTCATCGTCTTCCTGAGAGATAGAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp TTCATCAGCCCTCTGTCCCCAGTGCATGGAGGGCACTGTGTAGCATCCCCAACCAATGGTCGCATAAGATaGTCTGAGAACTGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: FISPLSPVHGGHCVASPTNGRIR*SENCAA
Trigger: TGCTGCGCAGTTCTCAGACAATCTTATGCGACCATT...GGTTGGGGATGCTACACAGTGCCCTCCATGCACTGGGGACAGAGGGCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp GGTGTCTCATGGCTATTGAGAGGGTCTGAGGGCTGTGGGTACCCTGGCCACACTAATGGTCGCATAAGATaGTCTGAGAACTGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GVSWLLRGSEGCGYPGHTNGRIR*SENCAA
Trigger: TGCTGCGCAGTTCTCAGACAATCTTATGCGACCATT...AGTGTGGCCAGGGTACCCACAGCCCTCAGACCCTCTCAATAGCCATGAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp GCACAGGGCTCTGCGGGCAAGCTGGGAACACACATGGTTGGCAGACGTGAAGCTAGCTTCTCTTTCTCCTaGATAACCATGTTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: AQGSAGKLGTHMVGRREASFSFS*ITMFRN
Trigger: GTTCCGGAACATGGTTATCAAGGAGAAAGAGAAGCT...AGCTTCACGTCTGCCAACCATGTGTGTTCCCAGCTTGCCCGCAGAGCCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp GTGTGGGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGTGTAAGATCTCTGGCTaGAGCTGCCCCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VWEKRMRSQTKEQAPTEACKISG*SCPRSS
Trigger: TGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTACA...CGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp AAAACCCCTGCTTCCTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACATGTAAGATCTCTGGCTaGAGCTGCCCCAGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: KTPASFWRHQELLRCHQTCKISG*SCPRSS
Trigger: TGAGCTTCTGGGGCAGCTCAAGCCAGAGATCTTACA...TGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAGGAAGCAGGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS TCA 90 bp CTCGGGTCAGCAGTACCTGCAATACAGAGTAAAGTCCACGCTGGTTaGGATGGCCCATTATATTTGCGCAAATGTGGTTCAGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGSAVPAIQSKVHAG*DGPLYLRKCGSGLA
Trigger: GGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCATCTCAACCAGCGTGGACTTTACTCTGTATTGCAGGTACTGCTGACCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS TCA 90 bp AGGCCTCGGGTCAGCAGTACCTTTTCCCCGGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTACAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: RPRVSSTFSPENLPC*SVCEGHKHGEVQRD
Trigger: ATCACGCTGTACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTACTGCTGACCCGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp GGAAAAGAGAATGAGGTCCCAGACAAAAGAGCAAGCGCCAACAGAGGCGGTGTGAGGAACTGCAGCTGCTaGGTGATCAGGTACATGGAA +
Preference number: 5 (lower is better)
Translates to: GKENEVPDKRASANRGGVRNCSC*VIRYME
Trigger: TTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCT...CACACCGCCTCTGTTGGCGCTTGCTCTTTTGTCTGGGACCTCATTCTCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000196651.5
CDS TCA 90 bp TCTCACAAGCATCGCGGCATCGGTCTCTATCTCTCAGGAAGACGATaGATTTACGAAGCATGTCATGGGACTCTAAAACGCCGAGGCGCT +
Preference number: 5 (lower is better)
Translates to: SHKHRGIGLYLSGRR*IYEACHGTLKRRGA
Trigger: AGCGCCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAAATTCATCGTCTTCCTGAGAGATAGAGACCGATGCCGCGATGCTTGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS GCA 90 bp CAATACAGAGTAAAGTCCACGCTGGTTGAGATGGCCCATTATATTTaGGCAAATGTGGTTCAGGGCTGGCCGAAGGCTCTCACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QYRVKSTLVEMAHYI*ANVVQGWPKALTFS
Trigger: GGAAAAGGTGAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCATCTCAACCAGCGTGGACTTTACTCTGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp GATGTGTGGGACGTATCCTCAGCTCCCAGGGCCTGTCAGTGCAAAAGGACGGACTGTCTGGTTTTTAATTaGAGTGTGCATTCGGAAATG +
Preference number: 5 (lower is better)
Translates to: DVWDVSSAPRACQCKRTDCLVFN*SVHSEM
Trigger: CATTTCCGAATGCACACTCAAATTAAAAACCAGACA...GTCCGTCCTTTTGCACTGACAGGCCCTGGGAGCTGAGGATACGTCCCACACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS-3UTR CAA 90 bp CTTCTGGCGCCACCAGGAGCTGCTGAGATGTCATCAAACAGCAGCTATGACATACTGTCCTCGGTAGTTTaGCATATAAACAGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LLAPPGAAEMSSNSSYDILSSVV*HINSSL
Trigger: GAGACTGCTGTTTATATGCAAAACTACCGAGGACAG...TATGTCATAGCTGCTGTTTGATGACATCTCAGCAGCTCCTGGTGGCGCCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS-3UTR CAA 90 bp CCCTTGGCATTCTCTACAATTCCGTCCCAGATCATCTTAAACACGAAGGAATTGTGCCACAGGATGCTCTaGATCTGCTTAATCCACAGC +
Preference number: 5 (lower is better)
Translates to: PLAFSTIPSQIILNTKELCHRML*ICLIHS
Trigger: GCTGTGGATTAAGCAGATCAAGAGCATCCTGTGGCA...CAATTCCTTCGTGTTTAAGATGATCTGGGACGGAATTGTAGAGAATGCCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8
CDS TCA 72 bp AGGAGGCTCACTCTTCACGGGGAGCACCGTCTGCGGTaGGGACGGCTGCGGTTGCACCGGGGCCGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RRLTLHGEHRLR*GRLRLHRGRLC
Trigger: GCAGAGCCGGCCCCGGTGCAACCGCAGCCGTCCTCACCGCAGACGGTGCTCCCCGTGAAGAGTGAGCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
CDS GCA 72 bp GCCTGGATCGTCACCGCTGAGCGCTCCCGCTCCTTCTaGACCAGCCTCTCTTCTCGTGCCTGCCGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: AWIVTAERSRSF*TSLSSRACRAL
Trigger: CAGAGCCCGGCAGGCACGAGAAGAGAGGCTGGTGCAGAAGGAGCGGGAGCGCTCAGCGGTGACGATCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
ENSMUST00000151809.3
CDS TCA 72 bp AAAACGCCGAGGCGCTCAGGGGCCACGGTGCTGAGATaGGCCACGAGAGCAGGTACCGACATGACGTGGATG +
Preference number: 6 (lower is better)
Translates to: KTPRRSGATVLR*ATRAGTDMTWM
Trigger: CATCCACGTCATGTCGGTACCTGCTCTCGTGGCTCATCTCAGCACCGTGGCCCCTGAGCGCCTCGGCGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS TCA 72 bp ACAGGCCTGAGGATGTTCCGAACCGAAGCCGACTTCTaGAACGCACGCTTGAGGAGGCTCACTCTTCACGGG +
Preference number: 6 (lower is better)
Translates to: TGLRMFRTEADF*NARLRRLTLHG
Trigger: CCCGTGAAGAGTGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGAACATCCTCAGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196651.5
CDS GCA 72 bp GCTTCGACACAACTTCTCCAGTCTCTGATGTCTCTGTaGAGTCGCCTCCGGCAGAGGAAACTGCGGACTAGG +
Preference number: 6 (lower is better)
Translates to: ASTQLLQSLMSL*SRLRQRKLRTR
Trigger: CCTAGTCCGCAGTTTCCTCTGCCGGAGGCGACTGCACAGAGACATCAGAGACTGGAGAAGTTGTGTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151809.3
CDS CAA 90 bp AGAGCAGGTACCGACATGACGTGGATGATGAATGGTCGCATAAGATaGTCTGAGAACTGCGCAGCAACCACAGGGCGCAGGGCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: RAGTDMTWMMNGRIR*SENCAATTGRRARE
Trigger: CTCTCTGGCCCTGCGCCCTGTGGTTGCTGCGCAGTTCTCAGACAATCTTATGCGACCATTCATCATCCACGTCATGTCGGTACCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS GCA 72 bp TGGATGATGAATGGTCGCATAAGATTGTCTGAGAACTaGGCAGCAACCACAGGGCGCAGGGCCAGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: WMMNGRIRLSEN*AATTGRRAREK
Trigger: CTTCTCTCTGGCCCTGCGCCCTGTGGTTGCTGCGCAGTTCTCAGACAATCTTATGCGACCATTCATCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS CCA 72 bp CGCTGGTTGAGATGGCCCATTATATTTGCGCAAATGTaGTTCAGGGCTGGCCGAAGGCTCTCACCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: RWLRWPIIFAQM*FRAGRRLSPFP
Trigger: GGGAAAAGGTGAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCATCTCAACCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS CCA 72 bp TCTCTCAGGAAGACGATGAATTTACGAAGCATGTCATaGGACTCTAAAACGCCGAGGCGCTCAGGGGCCACG +
Preference number: 6 (lower is better)
Translates to: SLRKTMNLRSMS*DSKTPRRSGAT
Trigger: CGTGGCCCCTGAGCGCCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAAATTCATCGTCTTCCTGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS CAA 72 bp ACCGACATGACGTGGATGATGAATGGTCGCATAAGATaGTCTGAGAACTGCGCAGCAACCACAGGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: TDMTWMMNGRIR*SENCAATTGRR
Trigger: CCTGCGCCCTGTGGTTGCTGCGCAGTTCTCAGACAATCTTATGCGACCATTCATCATCCACGTCATGTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS GCA 72 bp GTAAAGTCCACGCTGGTTGAGATGGCCCATTATATTTaGGCAAATGTGGTTCAGGGCTGGCCGAAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: VKSTLVEMAHYI*ANVVQGWPKAL
Trigger: GAGAGCCTTCGGCCAGCCCTGAACCACATTTGCGCAAATATAATGGGCCATCTCAACCAGCGTGGACTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074002.12
CDS GCA 72 bp ACACGTACCACACCTTTGGCTCATTCTCGGCATCCATaGTGTTCAGGATGCTTCGACACAACTTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: TRTTPLAHSRHP*CSGCFDTTSPV
Trigger: GACTGGAGAAGTTGTGTCGAAGCATCCTGAACAGCATGGATGCCGAGAATGAGCCAAAGGTGTGGTACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074002.12
ENSMUST00000130169.8
CDS TCA 72 bp GTCAGCAGTACCTTTTCCCCGGAGAATCTTCCATGTTaGAGTGTCTGTGAAGGTCACAAGCATGGTGAGGTA +
Preference number: 6 (lower is better)
Translates to: VSSTFSPENLPC*SVCEGHKHGEV
Trigger: TACCTCACCATGCTTGTGACCTTCACAGACACTTCAACATGGAAGATTCTCCGGGGAAAAGGTACTGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130169.8