Pregenerated sensors for UBE3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025326Ensembl transcript IDs: ENSMUST00000107537.5, ENSMUST00000200758.4, ENSMUST00000201409.4, ENSMUST00000202440.4, ENSMUST00000202945.4, ENSMUST00000207686.2, ENSMUST00000208313.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CCAAGTCAAGGGAATGGCAGTGCCAAACTAAAATTCAGAGTCATTTaGCTGAAGGCTACAACCCCAACCAGTGTGTACTATATTCCAGAT | + |
Preference number: 1 (lower is better) Translates to: PSQGNGSAKLKFRVI*LKATTPTSVYYIPD Trigger: ATCTGGAATATAGTACACACTGGTTGGGGTTGTAGCCTTCAGTCAAATGACTCTGAATTTTAGTTTGGCACTGCCATTCCCTTGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR GCA 90 bp | AGGCACAGTAGCTGTACTTTCTGTTATGCTGCAACACTGATCGAGTaGCTTGAAAAATGGTTGATTAAACAAGATGACGGCAACAGAAGG | + |
Preference number: 1 (lower is better) Translates to: RHSSCTFCYAATLIE*LEKWLIKQDDGNRR Trigger: CCTTCTGTTGCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATAACAGAAAGTACAGCTACTGTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR GCA 90 bp | ACACAATTAACTATAGACCACGATATGTACACTCAATTTGTTTGCTaGAGCTGCCAAGTTTCCAGAGAAGTTTTGCTGCAGGCTGTGCTT | + |
Preference number: 1 (lower is better) Translates to: TQLTIDHDMYTQFVC*SCQVSREVLLQAVL Trigger: AAGCACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGTTAATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR GCA 90 bp | ATCACACAATTAACTATAGACCACGATATGTACACTCAATTTGTTTaGTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCTGCAGGCTGTG | + |
Preference number: 1 (lower is better) Translates to: ITQLTIDHDMYTQFV*CSCQVSREVLLQAV Trigger: CACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGTTAATTGTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CCA 90 bp | TGTACTTTCTGTTATGCTGCAACACTGATCGAGTGCCTTGAAAAATaGTTGATTAAACAAGATGACGGCAACAGAAGGGGAGACTTTGGA | + |
Preference number: 1 (lower is better) Translates to: CTFCYAATLIECLEK*LIKQDDGNRRGDFG Trigger: TCCAAAGTCTCCCCTTCTGTTGCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATAACAGAAAGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR GCA 90 bp | CTCAATTTGTTTGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCTaGAGGCTGTGCTTTTATGCCATAAGTTTGAAATGTTCTACACTA | + |
Preference number: 1 (lower is better) Translates to: LNLFAAAAKFPEKFC*RLCFYAISLKCSTL Trigger: TAGTGTAGAACATTTCAAACTTATGGCATAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR GCA 90 bp | ACACTCAATTTGTTTGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTaGTGCAGGCTGTGCTTTTATGCCATAAGTTTGAAATGTTCTACA | + |
Preference number: 1 (lower is better) Translates to: TLNLFAAAAKFPEKF*CRLCFYAISLKCST Trigger: TGTAGAACATTTCAAACTTATGGCATAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR TCA 90 bp | ATGTGGACGCAACCTTACCATTTGTCATCCCTTTTCCTGCCTGTATaGCTTTTAGTAAGGTGTATAACCTCTCAAGTTACAGATATTTAT | + |
Preference number: 1 (lower is better) Translates to: MWTQPYHLSSLFLPV*LLVRCITSQVTDIY Trigger: ATAAATATCTGTAACTTGAGAGGTTATACACCTTACTAAAAGTCATACAGGCAGGAAAAGGGATGACAAATGGTAAGGTTGCGTCCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR TCA 90 bp | GCGAAACAGACAAAAAGGCCACATAATTGTATGACTCCATTAACATaGAATGACCAAAATAGGCAAATTCATAGGCATACGAAGACGAGT | + |
Preference number: 1 (lower is better) Translates to: AKQTKRPHNCMTPLT*NDQNRQIHRHTKTS Trigger: ACTCGTCTTCGTATGCCTATGAATTTGCCTATTTTGGTCATTTCATGTTAATGGAGTCATACAATTATGTGGCCTTTTTGTCTGTTTCGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACAGGCACAGACATAGATaGCTACTGTGGTTCACTATC | + |
Preference number: 2 (lower is better) Translates to: CNRLDYPIIWPDALSPVNRHRHR*LLWFTI Trigger: GATAGTGAACCACAGTAGTCATCTATGTCTGTGCCT...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR CAA 90 bp | TCCAAGTCAAGGGAATGGCAGTGCCAAACTAAAATTCAGAGTCATTaGACTGAAGGCTACAACCCCAACCAGTGTGTACTATATTCCAGA | + |
Preference number: 2 (lower is better) Translates to: SKSREWQCQTKIQSH*TEGYNPNQCVLYSR Trigger: TCTGGAATATAGTACACACTGGTTGGGGTTGTAGCCTTCAGTCAAATGACTCTGAATTTTAGTTTGGCACTGCCATTCCCTTGACTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTAAGGGAACGCACTTCTaGAGGCCTCCTCAACTGTTC | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIKGTHF*RPPQLF Trigger: GAACAGTTGAGGAGGCCTTCAGAAGTGCGTTCCCTT...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGGACTATCCTATCATTTaGCCAGATGCACTTTCCCCA | + |
Preference number: 2 (lower is better) Translates to: TIRRVSIQGVYELGWKSEDYPII*PDALSP Trigger: TGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTC...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CAA 90 bp | ACTTTCTGTTATGCTGCAACACTGATCGAGTGCCTTGAAAAATGGTaGATTAAACAAGATGACGGCAACAGAAGGGGAGACTTTGGATTG | + |
Preference number: 2 (lower is better) Translates to: TFCYAATLIECLEKW*IKQDDGNRRGDFGL Trigger: CAATCCAAAGTCTCCCCTTCTGTTGCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATAACAGAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR CAA 90 bp | GATCACACAATTAACTATAGACCACGATATGTACACTCAATTTGTTaGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCTGCAGGCTGT | + |
Preference number: 2 (lower is better) Translates to: DHTINYRPRYVHSIC*LQLPSFQRSFAAGC Trigger: ACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGTTAATTGTGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | GAACAGGAAGTTCAGAGGAGTACTTCTAAGTACAATCAGGAGAGTATCCATACATGCCACATGTTAATGTaGACAAGTTCTCTGAAGGCT | + |
Preference number: 2 (lower is better) Translates to: EQEVQRSTSKYNQESIHTCHMLM*TSSLKA Trigger: AGCCTTCAGAGAACTTGTTCACATTAACATGTGGCA...TGTATGGATACTCTCCTGATTGTACTTAGAAGTACTCCTCTGAACTTCCTGTTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGTTTTGCTGCAGGCTGTaGTTTTATGCCATAAGTTTG | + |
Preference number: 2 (lower is better) Translates to: TIRRVSIQGVYELGWKSEFCCRL*FYAISL Trigger: CAAACTTATGGCATAAAAGCACAGCCTGCAGCAAAA...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGTTTCCAGAGAAGTTTTaGTGCAGGCTGTGCTTTTAT | + |
Preference number: 2 (lower is better) Translates to: TIRRVSIQGVYELGWKSEFPEKF*CRLCFY Trigger: ATAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAA...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTAGGCACAGACATAGATaGCTACTGTGGTTCACTATC | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIRHRHR*LLWFTI Trigger: GATAGTGAACCACAGTAGTCATCTATGTCTGTGCCT...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGCAGGCTGTGCTTTTATaGCATAAGTTTGAAATGTTC | + |
Preference number: 2 (lower is better) Translates to: TIRRVSIQGVYELGWKSEQAVLL*HKFEMF Trigger: GAACATTTCAAACTTATGGCATAAAAGCACAGCCTG...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC | + |
Preference number: 2 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQKRIGY*NSSLQD Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTGTCAGGAAGATAACCTaGGTAAATCAAAGGATTGGG | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIVRKIT*VNQRIG Trigger: CCCAATCCTTTGATTTACTCAGGTTATCTTCCTGAC...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTGTGCCATCTTACACATaGCCAAAAATAAGGCAAAGG | + |
Preference number: 2 (lower is better) Translates to: LPLKLSSNIMVATFVTGVVPSYT*PKIRQR Trigger: CCTTTGCCTTATTTTTGGTCATGTGTAAGATGGCAC...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR-3UTR GCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGCTGTACTTTCTGTTATaGTGCAACACTGATCGAGTG | + |
Preference number: 2 (lower is better) Translates to: FGGYTIYFSGVLVPFISRLYFLL*CNTDRV Trigger: CACTCGATCAGTGTTGCAGCATAACAGAAAGTACAG...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTCTGTACTTTCTGTTATaGTGCAACACTGATCGAGTG | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVILYFLL*CNTDRV Trigger: CACTCGATCAGTGTTGCAGCATAACAGAAAGTACAG...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTACTCAATTTGTTTGCTaGAGCTGCCAAGTTTCCAGA | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVITQFVC*SCQVSR Trigger: TCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGT...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGAGTTGCCATGACTGCTaGAAGAGTATGAGTGGCATA | + |
Preference number: 2 (lower is better) Translates to: GQWDKVQESKISHIYGHLSCHDC*KSMSGI Trigger: TATGCCACTCATACTCTTCCAGCAGTCATGGCAACT...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CAA 90 bp | ACAAGAAAAAGATGTACACTCTTGCCACTTCAATTTAATATCATATaGGACGTGCTAGCCAGGGCACTTAGGCAGGGAAATCAAATAAAA | + |
Preference number: 2 (lower is better) Translates to: TRKRCTLLPLQFNII*DVLARALRQGNQIK Trigger: TTTTATTTGATTTCCCTGCCTAAGTGCCCTGGCTAGCACGTCCAATATGATATTAAATTGAAGTGGCAAGAGTGTACATCTTTTTCTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC | + |
Preference number: 2 (lower is better) Translates to: GQWDKVQESKISHIYGHLKRIGY*NSSLQD Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTGGGTCTGATATGATATaGGATATGAGACCCACAAAA | + |
Preference number: 2 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIGSDMI*DMRPTK Trigger: TTTTGTGGGTCTCATATCTCATATCATATCAGACCC...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACAAAATTCAGAGTCATTTaGCTGAAGGCTACAACCCCA | + |
Preference number: 2 (lower is better) Translates to: QHINTMTIFSHKRNSTSTKFRVI*LKATTP Trigger: TGGGGTTGTAGCCTTCAGTCAAATGACTCTGAATTT...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR TCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATAGAAATAAGGGCATTTaGCTAGAGAACGATGTTAGT | + |
Preference number: 2 (lower is better) Translates to: LSSNIMVATFVTGVRSKYRNKGI*LENDVS Trigger: ACTAACATCGTTCTCTAGTCAAATGCCCTTATTTCT...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR-3UTR TCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGACTACTCTGCATTTTaGTCAGTCACATTAGAAGAT | + |
Preference number: 2 (lower is better) Translates to: LSSNIMVATFVTGVRSKYDYSAF*SVTLED Trigger: ATCTTCTAATGTGACTGATCAAAATGCAGAGTAGTC...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR-3UTR GCA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACATTTGTTTGCTGCAGCTaGCAAGTTTCCAGAGAAGTT | + |
Preference number: 2 (lower is better) Translates to: QHINTMTIFSHKRNSTSTFVCCS*QVSREV Trigger: AACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAA...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | GAACAGGAAGTTCAGAGGAGTACTTCTAAGTACAATCAGGAGAGTATCCATACACTTTACATAGTGAAATaGAGTACATACATGCACTCA | + |
Preference number: 2 (lower is better) Translates to: EQEVQRSTSKYNQESIHTLYIVK*STYMHS Trigger: TGAGTGCATGTATGTACTGCATTTCACTATGTAAAG...TGTATGGATACTCTCCTGATTGTACTTAGAAGTACTCCTCTGAACTTCCTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGAAGGTGTCTATGAGTTaGGATGGAAAAGTGAGCCTT | + |
Preference number: 2 (lower is better) Translates to: GQWDKVQESKISHIYGHLKVSMS*DGKVSL Trigger: AAGGCTCACTTTTCCATCCCAACTCATAGACACCTT...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGTCACATTAGAAGATaGGGGGAAAGATCTTTCAGA | + |
Preference number: 2 (lower is better) Translates to: LPLKLSSNIMVATFVTGVSHIRR*GERSFR Trigger: TCTGAAAGATCTTTCCCCCCATCTTCTAATGTGACT...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR-3UTR GCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGTATCATTTGGCCAGATaGACTTTCCCCAGTAAACTT | + |
Preference number: 2 (lower is better) Translates to: GQWDKVQESKISHIYGHLYHLAR*TFPSKL Trigger: AAGTTTACTGGGGAAAGTGCATCTGGCCAAATGATA...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | CAAGGTAGTTTCCACTGTGAATTTACTCAGATTCCATACAAAAGAGAAGATGCTTACCTTATCACAATATaGAACGCACTGTGTTCTCTT | + |
Preference number: 2 (lower is better) Translates to: QGSFHCEFTQIPYKREDAYLITI*NALCSL Trigger: AAGAGAACACAGTGCGTTCCATATTGTGATAAGGTA...AGCATCTTCTCTTTTGTATGGAATCTGAGTAAATTCACAGTGGAAACTACCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR GCA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTCCAAAAAGACTACTCTaGATTTTGATCAGTCACATT | + |
Preference number: 2 (lower is better) Translates to: LPLKLSSNIMVATFVTGVPKRLL*ILISHI Trigger: AATGTGACTGATCAAAATGCAGAGTAGTCTTTTTGG...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR-3UTR CCA 90 bp | CCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAATACATGTTCTACAAATaGTGGCAATGTTTTCCTTGC | + |
Preference number: 2 (lower is better) Translates to: PDALSPVNLNNKNNNNNKYMFYK*WQCFPC Trigger: GCAAGGAAAACATTGCCACCATTTGTAGAACATGTA...TTTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACATACATGTTCTACAAATaGTGGCAATGTTTTCCTTGC | + |
Preference number: 2 (lower is better) Translates to: QHINTMTIFSHKRNSTSTYMFYK*WQCFPC Trigger: GCAAGGAAAACATTGCCACCATTTGTAGAACATGTA...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGGAGTGCCTTGAAAAATaGTTGATTAAACAAGATGAC | + |
Preference number: 2 (lower is better) Translates to: FGGYTIYFSGVLVPFISRECLEK*LIKQDD Trigger: GTCATCTTGTTTAATCAACCATTTTTCAAGGCACTC...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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3UTR GCA 72 bp | GACCACGATATGTACACTCAATTTGTTTGCTGCAGCTaGCAAGTTTCCAGAGAAGTTTTGCTGCAGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: DHDMYTQFVCCS*QVSREVLLQAV Trigger: CACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR GCA 72 bp | AATAGGCAAATTCATAGGCATACGAAGACGAGTAGTTaGCAGGGGTTGGAGTTAAGAACAGGCAGTCACTCT | + |
Preference number: 3 (lower is better) Translates to: NRQIHRHTKTSS*QGLELRTGSHS Trigger: AGAGTGACTGCCTGTTCTTAACTCCAACCCCTGGCAACTACTCGTCTTCGTATGCCTATGAATTTGCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CCA 72 bp | CAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTaGGATGGAAAAGTGAGCCTTTCAGGAAGCTGTAGC | + |
Preference number: 3 (lower is better) Translates to: QSGEYPYKVSMS*DGKVSLSGSCS Trigger: GCTACAGCTTCCTGAAAGGCTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR-3UTR CAA 90 bp | AGCTGTAGCCCAACTCTGCAAGGCTCTCAAGGGTTAAAAACAAGACTTCTTTACGTACACTCAATTTGTTaGCTGCAGCTGCCAAGTTTC | + |
Preference number: 3 (lower is better) Translates to: SCSPTLQGSQGLKTRLLYVHSIC*LQLPSF Trigger: GAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTAC...GTAAAGAAGTCTTGTTTTTAACCCTTGAGAGCCTTGCAGAGTTGGGCTACAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR TCA 72 bp | GGGAATGGCAGTGCCAAACTAAAATTCAGAGTCATTTaGCTGAAGGCTACAACCCCAACCAGTGTGTACTAT | + |
Preference number: 3 (lower is better) Translates to: GNGSAKLKFRVI*LKATTPTSVYY Trigger: ATAGTACACACTGGTTGGGGTTGTAGCCTTCAGTCAAATGACTCTGAATTTTAGTTTGGCACTGCCATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | TTTGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCTaGAGGCTGTGCTTTTATGCCATAAGTTTGAAATGT | + |
Preference number: 3 (lower is better) Translates to: FAAAAKFPEKFC*RLCFYAISLKC Trigger: ACATTTCAAACTTATGGCATAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | TTGTTTGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTaGTGCAGGCTGTGCTTTTATGCCATAAGTTTGAAA | + |
Preference number: 3 (lower is better) Translates to: LFAAAAKFPEKF*CRLCFYAISLK Trigger: TTTCAAACTTATGGCATAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | ACTATAGACCACGATATGTACACTCAATTTGTTTGCTaGAGCTGCCAAGTTTCCAGAGAAGTTTTGCTGCAG | + |
Preference number: 3 (lower is better) Translates to: TIDHDMYTQFVC*SCQVSREVLLQ Trigger: CTGCAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | GTTCTCAGGATGTCTTCCAAGATGTTATCTACCAGCTaGATGGTAATTTCACTGAAACCACACAACCAGAGA | + |
Preference number: 3 (lower is better) Translates to: VLRMSSKMLSTS*MVISLKPHNQR Trigger: TCTCTGGTTGTGTGGTTTCAGTGAAATTACCATGCAGCTGGTAGATAACATCTTGGAAGACATCCTGAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR CCA 72 bp | TGTTATGCTGCAACACTGATCGAGTGCCTTGAAAAATaGTTGATTAAACAAGATGACGGCAACAGAAGGGGA | + |
Preference number: 3 (lower is better) Translates to: CYAATLIECLEK*LIKQDDGNRRG Trigger: TCCCCTTCTGTTGCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR TCA 72 bp | AGGATGATGTCCTGGAAACACGGGTCTGATATGATATaGGATATGAGACCCACAAAATATGAGGCAAGAGAA | + |
Preference number: 3 (lower is better) Translates to: RMMSWKHGSDMI*DMRPTKYEARE Trigger: TTCTCTTGCCTCATATTTTGTGGGTCTCATATCTCATATCATATCAGACCCGTGTTTCCAGGACATCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR TCA 72 bp | CCACAAAAGAAACAGTACCAGTACATGCTACAACATTaGTGCAGTTTGAACTCATTGCTTTGTGGAAGGTGG | + |
Preference number: 3 (lower is better) Translates to: PQKKQYQYMLQH*CSLNSLLCGRW Trigger: CCACCTTCCACAAAGCAATGAGTTCAAACTGCATCAATGTTGTAGCATGTACTGGTACTGTTTCTTTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | AGCTGTACTTTCTGTTATGCTGCAACACTGATCGAGTaGCTTGAAAAATGGTTGATTAAACAAGATGACGGC | + |
Preference number: 3 (lower is better) Translates to: SCTFCYAATLIE*LEKWLIKQDDG Trigger: GCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATAACAGAAAGTACAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTGGCCAGGAAACAACTTaGTGGAGTTGCTCTTTCCTT | + |
Preference number: 3 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIGQETT*WSCSFL Trigger: AAGGAAAGAGCAACTCCACAAAGTTGTTTCCTGGCC...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | CAAGGTAGTTTCCACTGTGAATTTACTCAGATTCCATACAAAAGAGAAGATGCTTCCCCTTCCAATGATTaGAAAGCTACCATTATCCCC | + |
Preference number: 3 (lower is better) Translates to: QGSFHCEFTQIPYKREDASPSND*KATIIP Trigger: GGGGATAATGGTAGCTTTCAAATCATTGGAAGGGGA...AGCATCTTCTCTTTTGTATGGAATCTGAGTAAATTCACAGTGGAAACTACCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | TTAACTATAGACCACGATATGTACACTCAATTTGTTTaGTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCTG | + |
Preference number: 3 (lower is better) Translates to: LTIDHDMYTQFV*CSCQVSREVLL Trigger: CAGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR GCA 72 bp | CACCAGAAGACAGGATGTAGAGTTACAAAACTGTCTTaGTTTCAACCATCTAGTCTTTTCCAACTTACTGTC | + |
Preference number: 3 (lower is better) Translates to: HQKTGCRVTKLS*FQPSSLFQLTV Trigger: GACAGTAAGTTGGAAAAGACTAGATGGTTGAAAGCAAGACAGTTTTGTAACTCTACATCCTGTCTTCTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR CCA 72 bp | AACTTTGTGGAGTTGCTCTTTCCTTCCATGTTTATGTaGAGTCTAGGCAGAGTCTTCAGGTCAAGTTTTATA | + |
Preference number: 3 (lower is better) Translates to: NFVELLFPSMFM*SLGRVFRSSFI Trigger: TATAAAACTTGACCTGAAGACTCTGCCTAGACTCCACATAAACATGGAAGGAAAGAGCAACTCCACAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | GAACAGGAAGTTCAGAGGAGTACTTCTAAGTACAATCAGGAGAGTATCCATACAACAGAAGGGGAGACTTaGGATTGTCTATTAAAATCT | + |
Preference number: 3 (lower is better) Translates to: EQEVQRSTSKYNQESIHTTEGET*DCLLKS Trigger: AGATTTTAATAGACAATCCAAAGTCTCCCCTTCTGT...TGTATGGATACTCTCCTGATTGTACTTAGAAGTACTCCTCTGAACTTCCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACAGTTTCCAGAGAAGTTTaGCTGCAGGCTGTGCTTTTA | + |
Preference number: 3 (lower is better) Translates to: QHINTMTIFSHKRNSTSTVSREV*LQAVLL Trigger: TAAAAGCACAGCCTGCAGCAAAACTTCTCTGGAAAC...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | CAAGGTAGTTTCCACTGTGAATTTACTCAGATTCCATACAAAAGAGAAGATGCTATATGTACACTCAATTaGTTTGCTGCAGCTGCCAAG | + |
Preference number: 3 (lower is better) Translates to: QGSFHCEFTQIPYKREDAICTLN*FAAAAK Trigger: CTTGGCAGCTGCAGCAAACAAATTGAGTGTACATAT...AGCATCTTCTCTTTTGTATGGAATCTGAGTAAATTCACAGTGGAAACTACCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR CCA 72 bp | AGCAGCATAGAAAATGGTTTATGTAGCATAGACAAGTaGGGTAATTCCAGGAATGCAAGGTTCTTTCAATAC | + |
Preference number: 3 (lower is better) Translates to: SSIENGLCSIDK*GNSRNARFFQY Trigger: GTATTGAAAGAACCTTGCATTCCTGGAATTACCCCACTTGTCTATGCTACATAAACCATTTTCTATGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAATTTGAGCTTACTTGTTaGGTAACCAGTACCTACAGA | + |
Preference number: 3 (lower is better) Translates to: SSNIMVATFVTGVRSKYEFELTC*VTSTYR Trigger: TCTGTAGGTACTGGTTACCAAACAAGTAAGCTCAAA...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
3UTR CCA 72 bp | AGGCTCTCAAGGGTTAAAAACAAGACTTCTTTACTGTaGCAAATGGAGACTACTAGTATTATTGCAAGTACA | + |
Preference number: 3 (lower is better) Translates to: RLSRVKNKTSLL*QMETTSIIAST Trigger: TGTACTTGCAATAATACTAGTAGTCTCCATTTGCCACAGTAAAGAAGTCTTGTTTTTAACCCTTGAGAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGCATATACTAAGAGGATaGGCTACTGAAACAGTTCAT | + |
Preference number: 3 (lower is better) Translates to: FGGYTIYFSGVLVPFISRHILRG*ATETVH Trigger: ATGAACTGTTTCAGTAGCCAATCCTCTTAGTATATG...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTCATATACTAAGAGGATaGGCTACTGAAACAGTTCAT | + |
Preference number: 3 (lower is better) Translates to: FIGFVKMKDHVHRSLAVIHILRG*ATETVH Trigger: ATGAACTGTTTCAGTAGCCAATCCTCTTAGTATATG...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGAACAACTTTGTGGAGTaGCTCTTTCCTTCCATGTTT | + |
Preference number: 3 (lower is better) Translates to: GQWDKVQESKISHIYGHLNNFVE*LFPSMF Trigger: AAACATGGAAGGAAAGAGCAACTCCACAAAGTTGTT...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR-3UTR CAA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAAAGACTACTCTGCATTTaGATCAGTCACATTAGAAGA | + |
Preference number: 3 (lower is better) Translates to: SSNIMVATFVTGVRSKYERLLCI*ISHIRR Trigger: TCTTCTAATGTGACTGATCAAAATGCAGAGTAGTCT...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
3UTR TCA 72 bp | ATATTTACAGAGAACAGCATCTGGAGGATTCCTCTATaGAAATTTGAGAGACTAGTCAGTAATAACAGAACG | + |
Preference number: 3 (lower is better) Translates to: IFTENSIWRIPL*KFERLVSNNRT Trigger: CGTTCTGTTATTACTGACTAGTCTCTCAAATTTTCATAGAGGAATCCTCCAGATGCTGTTCTCTGTAAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR TCA 72 bp | ACAAAAAGGCCACATAATTGTATGACTCCATTAACATaGAATGACCAAAATAGGCAAATTCATAGGCATACG | + |
Preference number: 3 (lower is better) Translates to: TKRPHNCMTPLT*NDQNRQIHRHT Trigger: CGTATGCCTATGAATTTGCCTATTTTGGTCATTTCATGTTAATGGAGTCATACAATTATGTGGCCTTTTTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR TCA 72 bp | ATAGTAGCATATTACAGAAGTAGAAATAAGGGCATTTaGCTAGAGAACGATGTTAGTGGTAATACTGTCCTA | + |
Preference number: 3 (lower is better) Translates to: IVAYYRSRNKGI*LENDVSGNTVL Trigger: TAGGACAGTATTACCACTAACATCGTTCTCTAGTCAAATGCCCTTATTTCTACTTCTGTAATATGCTACTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR TCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNVLKVS*ACSFLG Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR CCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNSLLLS*RDEDHR Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR CAA 72 bp | TATGCTGCAACACTGATCGAGTGCCTTGAAAAATGGTaGATTAAACAAGATGACGGCAACAGAAGGGGAGAC | + |
Preference number: 4 (lower is better) Translates to: YAATLIECLEKW*IKQDDGNRRGD Trigger: GTCTCCCCTTCTGTTGCCGTCATCTTGTTTAATCAACCATTTTTCAAGGCACTCGATCAGTGTTGCAGCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR CAA 72 bp | GTAAACATGGAAAGGCCAGGAAACAACTTTGTGGAGTaGCTCTTTCCTTCCATGTTTATGTGGAGTCTAGGC | + |
Preference number: 4 (lower is better) Translates to: VNMERPGNNFVE*LFPSMFMWSLG Trigger: GCCTAGACTCCACATAAACATGGAAGGAAAGAGCAACTCCACAAAGTTGTTTCCTGGCCTTTCCATGTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR CAA 72 bp | AGGGAATGGCAGTGCCAAACTAAAATTCAGAGTCATTaGACTGAAGGCTACAACCCCAACCAGTGTGTACTA | + |
Preference number: 4 (lower is better) Translates to: REWQCQTKIQSH*TEGYNPNQCVL Trigger: TAGTACACACTGGTTGGGGTTGTAGCCTTCAGTCAAATGACTCTGAATTTTAGTTTGGCACTGCCATTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
3UTR CAA 72 bp | AGATGTACACTCTTGCCACTTCAATTTAATATCATATaGGACGTGCTAGCCAGGGCACTTAGGCAGGGAAAT | + |
Preference number: 4 (lower is better) Translates to: RCTLLPLQFNII*DVLARALRQGN Trigger: ATTTCCCTGCCTAAGTGCCCTGGCTAGCACGTCCAATATGATATTAAATTGAAGTGGCAAGAGTGTACATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACTCATCTGTAAACGAATaGACAATTTCCCAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNSSVNE*TISQNS Trigger: GGAGTTCTGGGAAATTGTTCATTCGTTTACAGATGA...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | CAAGGTAGTTTCCACTGTGAATTTACTCAGATTCCATACAAAAGAGAAGATGCTCTGGGATTCTCCTGGTaGTCTTTTACAAGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: QGSFHCEFTQIPYKREDALGFSW*SFTSCG Trigger: GCCACAGCTTGTAAAAGATCACCAGGAGAATCCCAG...AGCATCTTCTCTTTTGTATGGAATCTGAGTAAATTCACAGTGGAAACTACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACGGCTTTAATAGCTGCTaGATTGTTATCCATACGAAG | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNGFNSC*IVIHTK Trigger: CTTCGTATGGATAACAATGCAGCAGCTATTAAAGCC...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | AGCTGTAGCCCAACTCTGCAAGGCTCTCAAGGGTTAAAAACAAGACTTCTTTACAAAGCTCAGAACCAGTaGCTCAGCACTAGAAAATAT | + |
Preference number: 4 (lower is better) Translates to: SCSPTLQGSQGLKTRLLYKAQNQ*LSTRKY Trigger: ATATTTTCTAGTGCTGAGGCACTGGTTCTGAGCTTT...GTAAAGAAGTCTTGTTTTTAACCCTTGAGAGCCTTGCAGAGTTGGGCTACAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR CCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACTCCTGTATACAACCATaGGAAAATGGACATCCAGTA | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNSCIQP*ENGHPV Trigger: TACTGGATGTCCATTTTCCCATGGTTGTATACAGGA...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
3UTR CAA 72 bp | GCCACAAAAGAAACAGTACCAGTACATGCTACAACATaGATGCAGTTTGAACTCATTGCTTTGTGGAAGGTG | + |
Preference number: 4 (lower is better) Translates to: ATKETVPVHATT*MQFELIALWKV Trigger: CACCTTCCACAAAGCAATGAGTTCAAACTGCATCAATGTTGTAGCATGTACTGGTACTGTTTCTTTTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAACCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQPFLEG*GSQSFA Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | GAATTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: ELPLKLSSNIMVATFVTGPFLEG*GSQSFA Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...ACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR TCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA | + |
Preference number: 4 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQVLKVS*ACSFLG Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACTCTTCATCCTTTTCTTaGAGAGATTTCAATTCCTCC | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNSSSFS*RDFNSS Trigger: GGAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGA...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGTCATCTGTAAACGAATaGACAATTTCCCAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: TIRRVSIQGVYELGWKSESSVNE*TISQNS Trigger: GGAGTTCTGGGAAATTGTTCATTCGTTTACAGATGA...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGCACAAAACTCATTCGTaGAGGCCTCATTTCCACAGC | + |
Preference number: 4 (lower is better) Translates to: FGGYTIYFSGVLVPFISRHKTHS*RPHFHS Trigger: GCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTG...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAACACAAAACTCATTCGTaGAGGCCTCATTTCCACAGC | + |
Preference number: 4 (lower is better) Translates to: SSNIMVATFVTGVRSKYEHKTHS*RPHFHS Trigger: GCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTG...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR GCA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA | + |
Preference number: 4 (lower is better) Translates to: CNRLDYPIIWPDALSPVNPSHYI*IVNHFQ Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR CCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA | + |
Preference number: 4 (lower is better) Translates to: FIGFVKMKDHVHRSLAVISLLLS*RDEDHR Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR CCA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAAAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA | + |
Preference number: 4 (lower is better) Translates to: SSNIMVATFVTGVRSKYESLLLS*RDEDHR Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR CCA 90 bp | ACAATCAGGAGAGTATCCATACAAGGTGTCTATGAGTTGGGATGGAAAAGTGAGTCCTGTATACAACCATaGGAAAATGGACATCCAGTA | + |
Preference number: 4 (lower is better) Translates to: TIRRVSIQGVYELGWKSESCIQP*ENGHPV Trigger: TACTGGATGTCCATTTTCCCATGGTTGTATACAGGA...CTCACTTTTCCATCCCAACTCATAGACACCTTGTATGGATACTCTCCTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: GQWDKVQESKISHIYGHLPFLEG*GSQSFA Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGCACAAAACTCATTCGTaGAGGCCTCATTTCCACAGC | + |
Preference number: 4 (lower is better) Translates to: GQWDKVQESKISHIYGHLHKTHS*RPHFHS Trigger: GCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTG...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR GCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC | + |
Preference number: 4 (lower is better) Translates to: LSSNIMVATFVTGVRSKYSSSRT*SFFLFI Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR CCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAATCAATGTCCTCAGACTaGGATTCTCCTGGTGATCTT | + |
Preference number: 4 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQSMSSD*DSPGDL Trigger: AAGATCACCAGGAGAATCCCAGTCTGAGGACATTGA...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGTCCTCCACAACCAACTaGAAAAACTCTTTGGAAACG | + |
Preference number: 4 (lower is better) Translates to: FGGYTIYFSGVLVPFISRSSTTN*KNSLET Trigger: CGTTTCCAAAGAGTTTTTTCAGTTGGTTGTGGAGGA...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAATCCTCCACAACCAACTaGAAAAACTCTTTGGAAACG | + |
Preference number: 4 (lower is better) Translates to: SSNIMVATFVTGVRSKYESSTTN*KNSLET Trigger: CGTTTCCAAAGAGTTTTTTCAGTTGGTTGTGGAGGA...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
||
CDS-3UTR TCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGTCATTAGTCACCATATaGAAACCTCTGCGAAATGCC | + |
Preference number: 4 (lower is better) Translates to: FGGYTIYFSGVLVPFISRSLVTI*KPLRNA Trigger: GGCATTTCGCAGAGGTTTTCATATGGTGACTAATGA...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | TTTATTGGCTTTGTGAAAATGAAGGACCATGTGCACAGATCTTTAGCAGTCATTTCATTAGTCACCATATaGAAACCTCTGCGAAATGCC | + |
Preference number: 4 (lower is better) Translates to: FIGFVKMKDHVHRSLAVISLVTI*KPLRNA Trigger: GGCATTTCGCAGAGGTTTTCATATGGTGACTAATGA...AATGACTGCTAAAGATCTGTGCACATGGTCCTTCATTTTCACAAAGCCAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
||
CDS-3UTR TCA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTTCATTAGTCACCATATaGAAACCTCTGCGAAATGCC | + |
Preference number: 4 (lower is better) Translates to: LPLKLSSNIMVATFVTGVSLVTI*KPLRNA Trigger: GGCATTTCGCAGAGGTTTTCATATGGTGACTAATGA...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR GCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGGCTTTAATAGCTGCTaGATTGTTATCCATACGAAG | + |
Preference number: 4 (lower is better) Translates to: LSSNIMVATFVTGVRSKYGFNSC*IVIHTK Trigger: CTTCGTATGGATAACAATGCAGCAGCTATTAAAGCC...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR GCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATAAGGGCTTTAATAGCTaGTGCATTGTTATCCATACG | + |
Preference number: 4 (lower is better) Translates to: LSSNIMVATFVTGVRSKYKGFNS*CIVIHT Trigger: CGTATGGATAACAATGCAGCAGCTATTAAAGCCCTT...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR GCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATAAAGCTCAGAACCAGTaGCTCAGCACTAGAAAATAT | + |
Preference number: 4 (lower is better) Translates to: LSSNIMVATFVTGVRSKYKAQNQ*LSTRKY Trigger: ATATTTTCTAGTGCTGAGGCACTGGTTCTGAGCTTT...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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3UTR CAA 72 bp | ATTAACTATAGACCACGATATGTACACTCAATTTGTTaGCTGCAGCTGCCAAGTTTCCAGAGAAGTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: INYRPRYVHSIC*LQLPSFQRSFA Trigger: AGCAAAACTTCTCTGGAAACTTGGCAGCTGCAGCAAACAAATTGAGTGTACATATCGTGGTCTATAGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | CCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAATCCTCCACAACCAACTaGAAAAACTCTTTGGAAACG | + |
Preference number: 4 (lower is better) Translates to: PDALSPVNLNNKNNNNNKSSTTN*KNSLET Trigger: CGTTTCCAAAGAGTTTTTTCAGTTGGTTGTGGAGGA...TTTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGTGATATCTGGAAAGTaGTCATCATATCATCTTCCA | + |
Preference number: 4 (lower is better) Translates to: LSSNIMVATFVTGVRSKYVISGK*SSYHLP Trigger: TGGAAGATGATATGATGATCACTTTCCAGATATCAC...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR GCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAAAGGGCTTTAATAGCTaGTGCATTGTTATCCATACG | + |
Preference number: 4 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQKGFNS*CIVIHT Trigger: CGTATGGATAACAATGCAGCAGCTATTAAAGCCCTT...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | CAAGGTAGTTTCCACTGTGAATTTACTCAGATTCCATACAAAAGAGAAGATGCTAAGGGCTTTAATAGCTaGTGCATTGTTATCCATACG | + |
Preference number: 4 (lower is better) Translates to: QGSFHCEFTQIPYKREDAKGFNS*CIVIHT Trigger: CGTATGGATAACAATGCAGCAGCTATTAAAGCCCTT...AGCATCTTCTCTTTTGTATGGAATCTGAGTAAATTCACAGTGGAAACTACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | GCCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAAATTCCTCCTTTGTGTaGTGTTTGACTTTCCGAAAG | + |
Preference number: 4 (lower is better) Translates to: ARCTFPSKLKQQKQQQQQNSSFV*CLTFRK Trigger: CTTTCGGAAAGTCAAACAGCACACAAAGGAGGAATT...TTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | GAATTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTAATTCCTCCTTTGTGTaGTGTTTGACTTTCCGAAAG | + |
Preference number: 4 (lower is better) Translates to: ELPLKLSSNIMVATFVTGNSSFV*CLTFRK Trigger: CTTTCGGAAAGTCAAACAGCACACAAAGGAGGAATT...ACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR GCA 90 bp | CCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAAAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC | + |
Preference number: 4 (lower is better) Translates to: PDALSPVNLNNKNNNNNKSSSRT*SFFLFI Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...TTTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACAAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC | + |
Preference number: 4 (lower is better) Translates to: QHINTMTIFSHKRNSTSTSSSRT*SFFLFI Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGTCTTCATCCTTTTCTTaGAGAGATTTCAATTCCTCC | + |
Preference number: 4 (lower is better) Translates to: FGGYTIYFSGVLVPFISRSSSFS*RDFNSS Trigger: GGAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGA...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR TCA 90 bp | AGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATGAATCTTCATCCTTTTCTTaGAGAGATTTCAATTCCTCC | + |
Preference number: 4 (lower is better) Translates to: SSNIMVATFVTGVRSKYESSSFS*RDFNSS Trigger: GGAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGA...TTCATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR TCA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGGTGATATCTGGAAAGTaGTCATCATATCATCTTCCA | + |
Preference number: 4 (lower is better) Translates to: FGGYTIYFSGVLVPFISRVISGK*SSYHLP Trigger: TGGAAGATGATATGATGATCACTTTCCAGATATCAC...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | CCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAAAAAGCTCAGAACCAGTaGCTCAGCACTAGAAAATAT | + |
Preference number: 4 (lower is better) Translates to: PDALSPVNLNNKNNNNNKKAQNQ*LSTRKY Trigger: ATATTTTCTAGTGCTGAGGCACTGGTTCTGAGCTTT...TTTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR GCA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA | + |
Preference number: 4 (lower is better) Translates to: LPLKLSSNIMVATFVTGVPSHYI*IVNHFQ Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR TCA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGGTGATATCTGGAAAGTaGTCATCATATCATCTTCCA | + |
Preference number: 4 (lower is better) Translates to: GQWDKVQESKISHIYGHLVISGK*SSYHLP Trigger: TGGAAGATGATATGATGATCACTTTCCAGATATCAC...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CAA 72 bp | GTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTaGTACGTGTTTTTGACAAAGATAGCAAGCCTACTC | + |
Preference number: 4 (lower is better) Translates to: VQESKISHIYGH*YVFLTKIASLL Trigger: GAGTAGGCTTGCTATCTTTGTCAAAAACACGTACAAATGACCATAAATATGGCTAATTTTGGATTCTTGAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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3UTR CAA 72 bp | CCACTACAATCAGAAACAAGAAAAAGATGTACACTCTaGCCACTTCAATTTAATATCATATTGGACGTGCTA | + |
Preference number: 4 (lower is better) Translates to: PLQSETRKRCTL*PLQFNIILDVL Trigger: TAGCACGTCCAATATGATATTAAATTGAAGTGGCAAGAGTGTACATCTTTTTCTTGTTTCTGATTGTAGTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS GCA 90 bp | TATCCATACGAAGAAAAGTTGGACAGGAAGCACAAAACTCATTCGTaGAGGCCTCATTTCCACAGCCCTCAGTTAACTGATGGTAGTAGC | + |
Preference number: 5 (lower is better) Translates to: YPYEEKLDRKHKTHS*RPHFHSPQLTDGSS Trigger: GCTACTACCATCAGTTAACTGAGGGCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 ENSMUST00000201409.4 ENSMUST00000202440.4 ENSMUST00000202945.4 ENSMUST00000207686.2 ENSMUST00000208313.2 |
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CDS-3UTR CAA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACTCCCTCATCTACTCCTaGTTCTCCTTCAAATTCCAC | + |
Preference number: 5 (lower is better) Translates to: CNRLDYPIIWPDALSPVNSLIYS*FSFKFH Trigger: GTGGAATTTGAAGGAGAACAAGGAGTAGATGAGGGA...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS CCA 90 bp | AAGGGCTTTAATAGCTGCTGCATTGTTATCCATACGAAGAAAAGTTaGACAGGAAGCACAAAACTCATTCGTGCAGGCCTCATTTCCACA | + |
Preference number: 5 (lower is better) Translates to: KGFNSCCIVIHTKKS*TGSTKLIRAGLIST Trigger: TGTGGAAATGAGGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 ENSMUST00000201409.4 ENSMUST00000202945.4 ENSMUST00000207686.2 ENSMUST00000208313.2 |
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CDS-3UTR CAA 90 bp | TGCAATAGGCTTGACTATCCTATCATTTGGCCAGATGCACTTTCCCCAGTAAACCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT | + |
Preference number: 5 (lower is better) Translates to: CNRLDYPIIWPDALSPVNPYEEK*DRKHKT Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...GTTTACTGGGGAAAGTGCATCTGGCCAAATGATAGGATAGTCAAGCCTATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR CAA 90 bp | CTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTAGAAGCAAATATCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT | + |
Preference number: 5 (lower is better) Translates to: LSSNIMVATFVTGVRSKYPYEEK*DRKHKT Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...ATATTTGCTTCTAACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR CAA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTTCCCTCATCTACTCCTaGTTCTCCTTCAAATTCCAC | + |
Preference number: 5 (lower is better) Translates to: LPLKLSSNIMVATFVTGVSLIYS*FSFKFH Trigger: GTGGAATTTGAAGGAGAACAAGGAGTAGATGAGGGA...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR CAA 90 bp | CCAGATGCACTTTCCCCAGTAAACTTAAACAACAAAAACAACAACAACAACAAATCCCTCATCTACTCCTaGTTCTCCTTCAAATTCCAC | + |
Preference number: 5 (lower is better) Translates to: PDALSPVNLNNKNNNNNKSLIYS*FSFKFH Trigger: GTGGAATTTGAAGGAGAACAAGGAGTAGATGAGGGA...TTTGTTGTTGTTGTTGTTTTTGTTGTTTAAGTTTACTGGGGAAAGTGCATCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR CAA 90 bp | CAGCATATCAATACAATGACAATATTCAGCCACAAAAGAAACAGTACCAGTACAGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC | + |
Preference number: 5 (lower is better) Translates to: QHINTMTIFSHKRNSTSTVLLDA*QLLASF Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...TGTACTGGTACTGTTTCTTTTGTGGCTGAATATTGTCATTGTATTGATATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS-3UTR CAA 90 bp | TTTGGGGGATATACAATTTATTTCTCAGGAGTACTAGTTCCATTCATTTCCAGGGTCTTCATCCTTTTCTaGAAGAGATTTCAATTCCTC | + |
Preference number: 5 (lower is better) Translates to: FGGYTIYFSGVLVPFISRVFILF*KRFQFL Trigger: GAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGAC...CCTGGAAATGAATGGAACTAGTACTCCTGAGAAATAAATTGTATATCCCCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 |
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CDS-3UTR CAA 90 bp | TTACCTTTAAAACTGAGCAGCAATATAATGGTTGCCACTTTTGTGACTGGTGTTGTCTTCATCCTTTTCTaGAAGAGATTTCAATTCCTC | + |
Preference number: 5 (lower is better) Translates to: LPLKLSSNIMVATFVTGVVFILF*KRFQFL Trigger: GAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGAC...AACACCAGTCACAAAAGTGGCAACCATTATATTGCTGCTCAGTTTTAAAGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202945.4 |
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CDS-3UTR CAA 90 bp | GGACAATGGGACAAAGTTCAAGAATCCAAAATTAGCCATATTTATGGTCATTTGGTCTTCATCCTTTTCTaGAAGAGATTTCAATTCCTC | + |
Preference number: 5 (lower is better) Translates to: GQWDKVQESKISHIYGHLVFILF*KRFQFL Trigger: GAGGAATTGAAATCTCTTCAAGAAAAGGATGAAGAC...CAAATGACCATAAATATGGCTAATTTTGGATTCTTGAACTTTGTCCCATTGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200758.4 |
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CDS GCA 72 bp | ATTAATTTTATAAAGCTCAAGGGCTTTAATAGCTGCTaGATTGTTATCCATACGAAGAAAAGTTGGACAGGA | + |
Preference number: 6 (lower is better) Translates to: INFIKLKGFNSC*IVIHTKKSWTG Trigger: TCCTGTCCAACTTTTCTTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTTGAGCTTTATAAAATTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 ENSMUST00000201409.4 ENSMUST00000202945.4 ENSMUST00000207686.2 ENSMUST00000208313.2 |
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CDS GCA 72 bp | TGCATTAATTTTATAAAGCTCAAGGGCTTTAATAGCTaGTGCATTGTTATCCATACGAAGAAAAGTTGGACA | + |
Preference number: 6 (lower is better) Translates to: CINFIKLKGFNS*CIVIHTKKSWT Trigger: TGTCCAACTTTTCTTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTTGAGCTTTATAAAATTAATGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000107537.5 ENSMUST00000200758.4 ENSMUST00000201409.4 ENSMUST00000202945.4 ENSMUST00000207686.2 ENSMUST00000208313.2 |