Pregenerated sensors for UBE2Z (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014349Ensembl transcript IDs: ENSMUST00000100528.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCCAGAGTCCCAGCCACAATCCCTCGAGCCATTGGCTGTCCATaGTCACAAATCCCCAGGGATGGGGGTAGGACAGAAGGGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: VSRVPATIPRAIGCP*SQIPRDGGRTEGRT Trigger: TGTCCTCCCTTCTGTCCTACCCCCATCCCTGGGGATTTGTGAGCATGGACAGCCAATGGCTCGAGGGATTGTGGCTGGGACTCTGGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | GGCATCCTCAGCCCTGGACTAGCTCTGGGAATGGAAGAGGGAAATTaGAAGCAGAGTCCCCTTTCAAACCTCCACATGACCCAGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: GILSPGLALGMEEGN*KQSPLSNLHMTQPP Trigger: TGGTGGCTGGGTCATGTGGAGGTTTGAAAGGGGACTCTGCTTCCAATTTCCCTCTTCCATTCCCAGAGCTAGTCCAGGGCTGAGGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | CCAGAGGCCATCACTCCAGGTACTTTCACAAAAGTACCCTGGCCCTaGTCCAGGATTGACTGTTGCCCTAGGTGCTCCAGCACCAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: PEAITPGTFTKVPWP*SRIDCCPRCSSTKE Trigger: CTCTTTGGTGCTGGAGCACCTAGGGCAACAGTCAATCCTGGATCAGGGCCAGGGTACTTTTGTGAAAGTACCTGGAGTGATGGCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | ATGACAGACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCCTaGACTAGCTCTGGGAATGGAAGAGGGAAATTGGAAGCAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: MTDNTGPTDQRHPQP*TSSGNGRGKLEAES Trigger: GGACTCTGCTTCCAATTTCCCTCTTCCATTCCCAGAGCTAGTCCAGGGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGTCTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | CAGGGCATAAAAGTCAGGCTGCTATGCCGGACATGCTCTGCCCCATaGCAGGGCCAAGGAGAAGATTGTCACTTGAAAGTGGGAACACTT | + |
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Preference number: 1 (lower is better) Translates to: QGIKVRLLCRTCSAP*QGQGEDCHLKVGTL Trigger: AAGTGTTCCCACTTTCAAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAGAGCATGTCCGGCATAGCAGCCTGACTTTTATGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | GGACATGCTCTGCCCCATGGCAGGGCCAAGGAGAAGATTGTCACTTaGAAGTGGGAACACTTAATGGATGACAGACAACACTGGACCCAC | + |
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Preference number: 1 (lower is better) Translates to: GHALPHGRAKEKIVT*KWEHLMDDRQHWTH Trigger: GTGGGTCCAGTGTTGTCTGTCATCCATTAAGTGTTCCCACTTTCAAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAGAGCATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR GCA 90 bp | TTAAAACCAGGGCATAAAAGTCAGGCTGCTATGCCGGACATGCTCTaGCCCATGGCAGGGCCAAGGAGAAGATTGTCACTTGAAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LKPGHKSQAAMPDML*PMAGPRRRLSLESG Trigger: CCCACTTTCAAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAGAGCATGTCCGGCATAGCAGCCTGACTTTTATGCCCTGGTTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | AAATGGTGTGAGGGAGAAGGTGCTCAGGTGCTAGGTAAAGCTTACTaGTCAGCAGCCCAGACTCCACCACTGTTCCTTGTCTTTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: KWCEGEGAQVLGKAY*SAAQTPPLFLVFGL Trigger: CAGACCAAAGACAAGGAACAGTGGTGGAGTCTGGGCTGCTGATCAGTAAGCTTTACCTAGCACCTGAGCACCTTCTCCCTCACACCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | CTCCATTTCTCAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTaGATCACTAACCATCCACTGGAAGCCAGAACAGCAACCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LHFSGLDTDQKACIM*ITNHPLEARTATLK Trigger: TTTCAGGGTTGCTGTTCTGGCTTCCAGTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTGAGAAATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | TGTCTTCTCCTATCCCTAATTAGCTGGCCCTGCAGAGAGGTGTGTTaGTTGTTTAGCTTTGCCAGAGGCCATCACTCCAGGTACTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: CLLLSLISWPCREVC*LFSFARGHHSRYFH Trigger: GTGAAAGTACCTGGAGTGATGGCCTCTGGCAAAGCTAAACAACCAACACACCTCTCTGCAGGGCCAGCTAATTAGGGATAGGAGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CCA 90 bp | CAAACTCCCAGATATCCCTATAAACCACTTGGGCATGCTCCCTCTTaGGTTCTCATTTTCTGTCTTCTCCTATCCCTAATTAGCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: QTPRYPYKPLGHAPS*VLIFCLLLSLISWP Trigger: GGGCCAGCTAATTAGGGATAGGAGAAGACAGAAAATGAGAACCCAAGAGGGAGCATGCCCAAGTGGTTTATAGGGATATCTGGGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | GTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTaGCCAGGTCAAGGTGGGGAATTGCTGAGTACCTACCCTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VPLQFSNLSKFLTVS*PGQGGELLSTYPVL Trigger: AAGAACAGGGTAGGTACTCAGCAATTCCCCACCTTGACCTGGTCAGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | CCCAGACTCCACCACTGTTCCTTGTCTTTGGTCTGTCTAGAACAGTaGCTATATAAATTAGGAAAAACAAAGTTATGCTGGCCCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: PRLHHCSLSLVCLEQ*LYKLGKTKLCWPMG Trigger: TCCCATGGGCCAGCATAACTTTGTTTTTCCTAATTTATATAGTCACTGTTCTAGACAGACCAAAGACAAGGAACAGTGGTGGAGTCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR TCA 90 bp | CCAAATTCCTTACTGTTTCCTGACCAGGTCAAGGTGGGGAATTGCTaGGTACCTACCCTGTTCTTTTATATACACTGTCCATTTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: PNSLLFPDQVKVGNC*VPTLFFYIHCPFVL Trigger: AAGGACAAATGGACAGTGTATATAAAAGAACAGGGTAGGTACTCAGCAATTCCCCACCTTGACCTGGTCAGGAAACAGTAAGGAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR GCA 90 bp | ACCAATTCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTaGTCTGTGACTTGTCTTGCAGTCTTCTATGTGAAGGAAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: TNSSSSSFPFHPSRL*SVTCLAVFYVKETE Trigger: TTCAGTTTCCTTCACATAGAAGACTGCAAGACAAGTCACAGAGCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGAATTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCCCACCCAAACTCCCAGATATCCCTATAAACCACTTGGGCATGCTCCCCGAGGGGAGGGGCTCTaGTGGGACTCTCGAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: STPTQTPRYPYKPLGHAPRGEGL*WDSRVG Trigger: CCCAACTCGAGAGTCCCAGCAGAGCCCCTCCCCTCG...GGGAGCATGCCCAAGTGGTTTATAGGGATATCTGGGAGTTTGGGTGGGGGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTGGATCACTAACCATCCACAAGGGAGATGCACAGTaGCTCTCCGTCCCTGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: QGWTLTRRPVSCGSLTIHKGDAQ*LSVPGA Trigger: CGCCCCAGGGACGGAGAGGCACTGTGCATCTCCCTT...GTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | ACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCCTGGACTAGCTCTGGGAGGGGTTGAGCTTGCTTaGTTCTTGCCACCTTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: TTLDPQTKGILSPGLALGGVELA*FLPPCG Trigger: TCCGCAAGGTGGCAAGAAGCAAGCAAGCTCAACCCC...TCCCAGAGCTAGTCCAGGGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTGGATCACTAACCATCCACCCTTGCGGACACCTTTaGAGGGAGATGCACAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: QGWTLTRRPVSCGSLTIHPCGHL*REMHSA Trigger: GGCACTGTGCATCTCCCTTCAAAGGTGTCCGCAAGG...GTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CCTATCTCTGCAAGGGAGTCCCATGATCCACAAGTCAGAGACCTTTATAGCAGCCCAAAGAGGTCAGACTaGGACCAGCCCCACCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PISARESHDPQVRDLYSSPKRSD*DQPHPH Trigger: GTGGGGGTGGGGCTGGTCCCAGTCTGACCTCTTTGG...GCTGCTATAAAGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCAGAGATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCAGTGCCAAAGCTAGAGCCAGGCTCTACTAGCCCACGTTACCCTATCGGAAGAAAAGGGTGTTaGGAAGCCCTGCTTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PEAVPKLEPGSTSPRYPIGRKGC*EALLQD Trigger: GTCTTGAAGCAGGGCTTCCCAACACCCTTTTCTTCC...GATAGGGTAACGTGGGCTAGTAGAGCCTGGCTCTAGCTTTGGCACTGCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | TATCATTGCACTCACAGTACAGGCTGGCAGGACAGAACATGCACTGGTTATTTCATGCCGGACATGCTCTaGCCCATGGCAGGGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: YHCTHSTGWQDRTCTGYFMPDML*PMAGPR Trigger: CCTTGGCCCTGCCATGGGGCAGAGCATGTCCGGCAT...GAAATAACCAGTGCATGTTCTGTCCTGCCAGCCTGTACTGTGAGTGCAATGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | CACTTCACCAATTCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCCTGCTATGCCGGACATaGTCTGCCCCATGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HFTNSSSSSFPFHPSRLCLLCRT*SAPWQG Trigger: GCCCTGCCATGGGGCAGAGCATGTCCGGCATAGCAG...GCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGAATTGGTGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | CCTATCTCTGCAAGGGAGTCCCATGATCCACAAGTCAGAGACCTTTATAGCAGCAAATCCCACACAGGCTaGAGCTGCCTGTGCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PISARESHDPQVRDLYSSKSHTG*SCLCWE Trigger: TTCCCAGCACAGGCAGCTGCAGCCTGTGTGGGATTT...GCTGCTATAAAGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCAGAGATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CACTTCACCAATTCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCAGCGGGCAGGGCAGGTaGCTCTCTCCATTTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HFTNSSSSSFPFHPSRLCSGQGR*LSPFLR Trigger: CCTGAGAAATGGAGAGAGCCACCTGCCCTGCCCGCT...GCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGAATTGGTGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGCAGTGCCAAAGCTAGAGCCAGGCTCTACTAGCCCACGTTACCCTATCAAGGAACAGCTCCAGTaGCAAAGAGGGAAAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: PEAVPKLEPGSTSPRYPIKEQLQ*QRGKDK Trigger: TTTATCTTTCCCTCTTTGTCACTGGAGCTGTTCCTT...GATAGGGTAACGTGGGCTAGTAGAGCCTGGCTCTAGCTTTGGCACTGCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCTCCCTATCTCTGCAAGGGAGTCCCATGATCCACAAGTCAGAGACCTTTACCTTTGAAGGGAGATaGACAGTGCCTCTCCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: IFSLSLQGSPMIHKSETFTFEGR*TVPLRP Trigger: GGGACGGAGAGGCACTGTGCATCTCCCTTCAAAGGT...AAAGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCAGAGATAGGGAGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | CCTATCTCTGCAAGGGAGTCCCATGATCCACAAGTCAGAGACCTTTATAGCAGCGGCTGCAGCTGCCTGTaGTGGGAACCTTTCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: PISARESHDPQVRDLYSSGCSCL*WEPFKS Trigger: TGATTTGAAAGGTTCCCAGCACAGGCAGCTGCAGCC...GCTGCTATAAAGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCAGAGATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCCTCTTTGTGCCCTATCTTCTCCCTATCTCTGCAAGGGAGTCCCATGATTGCAGCTGCCTGTGCTaGGAACCTTTCAAATCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RSLFVPYLLPISARESHDCSCLC*EPFKSV Trigger: CACTGATTTGAAAGGTTCCCAGCACAGGCAGCTGCA...ATCATGGGACTCCCTTGCAGAGATAGGGAGAAGATAGGGCACAAAGAGGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CAA 90 bp | TGGACAGCACCCCCACCCAAACTCCCAGATATCCCTATAAACCACTaGGGCATGCTCCCTCTTGGGTTCTCATTTTCTGTCTTCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: WTAPPPKLPDIPINH*GMLPLGFSFSVFSY Trigger: ATAGGAGAAGACAGAAAATGAGAACCCAAGAGGGAGCATGCCCAAGTGGTTTATAGGGATATCTGGGAGTTTGGGTGGGGGTGCTGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAAACAGATAACCAACCAGACTGCTTAAGTGTCATGGACAGCACCCCCACCCTAATTAGCTGGCCCTaGAGAGAGGTGTGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: RQTDNQPDCLSVMDSTPTLISWP*REVCWL Trigger: CAACCAACACACCTCTCTGCAGGGCCAGCTAATTAG...GGTGGGGGTGCTGTCCATGACACTTAAGCAGTCTGGTTGGTTATCTGTTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | TCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCTCTGTGACTTGTAAAGTCAGGCTGCTATaGCGGACATGCTCTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSSSFPFHPSRLCSVTCKVRLL*RTCSAP Trigger: TGGGGCAGAGCATGTCCGGCATAGCAGCCTGACTTT...ACAAGTCACAGAGCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTGGATCACTAACCATCCACAAAATTCGGAGGAAATaGTGTGAGGGAGAAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QGWTLTRRPVSCGSLTIHKIRRK*CEGEGA Trigger: AGCACCTTCTCCCTCACACCATTTCCTCCGAATTTT...GTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CAA 90 bp | CTTCTCCTATCCCTAATTAGCTGGCCCTGCAGAGAGGTGTGTTGGTaGTTTAGCTTTGCCAGAGGCCATCACTCCAGGTACTTTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LLLSLISWPCREVCW*FSFARGHHSRYFHK Trigger: TTTGTGAAAGTACCTGGAGTGATGGCCTCTGGCAAAGCTAAACAACCAACACACCTCTCTGCAGGGCCAGCTAATTAGGGATAGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCTCTGTGACTTGTTGCAAGGGAGTCCCATaGTCCACAAGTCAGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: SSSSSFPFHPSRLCSVTCCKGVP*STSQRP Trigger: AGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCA...ACAAGTCACAGAGCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR CAA 90 bp | ATCTTGACTCCCATCTGCCCTCACAGGACATGCTCACGCCCAATCTaGAAAGCTACTTTTGGTATCCACTCAGGGTTAGTTGTTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: ILTPICPHRTCSRPI*KATFGIHSGLVVLS Trigger: TGACAGAACAACTAACCCTGAGTGGATACCAAAAGTAGCTTTCAAGATTGGGCGTGAGCATGTCCTGTGAGGGCAGATGGGAGTCAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | TTACCGTGCTCCACCCCAAGAAAACCACCCTCATTGACTACTATTCAGGACAATCTATCCCTAATTAGCTaGCCCTGCAGAGAGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LPCSTPRKPPSLTTIQDNLSLIS*PCREVC Trigger: ACACACCTCTCTGCAGGGCCAGCTAATTAGGGATAG...ATTGTCCTGAATAGTAGTCAATGAGGGTGGTTTTCTTGGGGTGGAGCACGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | TATCATTGCACTCACAGTACAGGCTGGCAGGACAGAACATGCACTGGTTATTTCGGGCATGCTCCCTCTTaGGTTCTCATTTTCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: YHCTHSTGWQDRTCTGYFGHAPS*VLIFCL Trigger: AAGACAGAAAATGAGAACCCAAGAGGGAGCATGCCC...GAAATAACCAGTGCATGTTCTGTCCTGCCAGCCTGTACTGTGAGTGCAATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGAACAGTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTGCCATTGGCTGTCCATaGTCACAAATCCCCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LEQFHCSSVICPNSLLFPAIGCP*SQIPRD Trigger: ATCCCTGGGGATTTGTGAGCATGGACAGCCAATGGC...AGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAACTGTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGTGCCTTCACATTTCATCTGTTTTGGAGGAAGCCTCTTTTATCCAGTCAGTTCTCTGCTTTCTaGCCTCCCAAGAGGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: FRSAFTFHLFWRKPLLSSQFSAF*PPKRSL Trigger: GAGGGACCTCTTGGGAGGGCAGAAAGCAGAGAACTG...ACTGGATAAAAGAGGCTTCCTCCAAAACAGATGAAATGTGAAGGCACTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGTGCCTTCACATTTCATCTGTTTTGGAGGAAGCCTCTTTTATCCAGTCCCTGTCCAGTTCTCTaGTTTCTGCCCTCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: FRSAFTFHLFWRKPLLSSPCPVL*FLPSQE Trigger: CTCTTGGGAGGGCAGAAAGCAGAGAACTGGACAGGG...ACTGGATAAAAGAGGCTTCCTCCAAAACAGATGAAATGTGAAGGCACTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CACTTCACCAATTCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCTGCAGAGAGGTGTGTTaGTTGTTTAGCTTTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HFTNSSSSSFPFHPSRLCCREVC*LFSFAR Trigger: TCTGGCAAAGCTAAACAACCAACACACCTCTCTGCA...GCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGAATTGGTGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | TTACCGTGCTCCACCCCAAGAAAACCACCCTCATTGACTACTATTCAGGACAATAAAACAAAGTTATGCTaGCCCATGGGAAATAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPCSTPRKPPSLTTIQDNKTKLC*PMGNRG Trigger: TCCCCTATTTCCCATGGGCCAGCATAACTTTGTTTT...ATTGTCCTGAATAGTAGTCAATGAGGGTGGTTTTCTTGGGGTGGAGCACGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGTGCCTTCACATTTCATCTGTTTTGGAGGAAGCCTCTTTTATCCAGTAGAGGTCCCTCTTTGTaGCCTATCTTCTCCCTATCT | + |
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Preference number: 2 (lower is better) Translates to: FRSAFTFHLFWRKPLLSSRGPSL*PIFSLS Trigger: AGATAGGGAGAAGATAGGGCACAAAGAGGGACCTCT...ACTGGATAAAAGAGGCTTCCTCCAAAACAGATGAAATGTGAAGGCACTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGAACAGTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTTGCTGGGTCAATATCTaGACACAAATACAGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LEQFHCSSVICPNSLLFPCWVNI*TQIQWL Trigger: AAGCCACTGTATTTGTGTCCAGATATTGACCCAGCA...AGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAACTGTTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGAACAGTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTGAGAAGATTGTCACTTaGAAGTGGGAACACTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: LEQFHCSSVICPNSLLFPEKIVT*KWEHLM Trigger: CATTAAGTGTTCCCACTTTCAAGTGACAATCTTCTC...AGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAACTGTTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | GAGCTTGCTTGCTTCTTGCCACCTTGCGGACACCTTTaGAGGGAGATGCACAGTGCCTCTCCGTCCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ELACFLPPCGHL*REMHSASPSLG Trigger: CCCCAGGGACGGAGAGGCACTGTGCATCTCCCTTCAAAGGTGTCCGCAAGGTGGCAAGAAGCAAGCAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | AGTCTCCAGAGTCCCAGCCACAATCCCTCGAGCCATTaGCTGTCCATGCTCACAAATCCCCAGGGATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLQSPSHNPSSH*LSMLTNPQGWG Trigger: CCCCCATCCCTGGGGATTTGTGAGCATGGACAGCCAATGGCTCGAGGGATTGTGGCTGGGACTCTGGAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | GCTGCAGCTGCCTGTGCTGGGAACCTTTCAAATCAGTaGTTGTGGGGACACAGTGAGCAGCTTCCTGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAAACAGNLSNQ*LWGHSEQLPDA Trigger: GGCGTCAGGAAGCTGCTCACTGTGTCCCCACAATCACTGATTTGAAAGGTTCCCAGCACAGGCAGCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTGGATCACTAACCATCCACCCCCTGGGGTTGAGCTaGCTTGCTTCTTGCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: QGWTLTRRPVSCGSLTIHPLGLS*LASCHL Trigger: AAGGTGGCAAGAAGCAAGCAAGCTCAACCCCAGGGG...GTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR GCA 72 bp | TCTCTGCTTTCTGCCCTCCCAAGAGGTCCCTCTTTGTaGCCTATCTTCTCCCTATCTCTGCAAGGGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLSALPRGPSL*PIFSLSLQGSP Trigger: GGGACTCCCTTGCAGAGATAGGGAGAAGATAGGGCACAAAGAGGGACCTCTTGGGAGGGCAGAAAGCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR GCA 72 bp | GGGCATAAAAGTCAGGCTGCTATGCCGGACATGCTCTaGCCCATGGCAGGGCCAAGGAGAAGATTGTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: GHKSQAAMPDML*PMAGPRRRLSL Trigger: AAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAGAGCATGTCCGGCATAGCAGCCTGACTTTTATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | CAGCTTCCTGACGCCCATGCAGACTTCACAGAGACCTaGGCTCAGTTCCAGCTGGCTTACCTTCTACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QLPDAHADFTET*AQFQLAYLLPV Trigger: TACAGGTAGAAGGTAAGCCAGCTGGAACTGAGCCCAGGTCTCTGTGAAGTCTGCATGGGCGTCAGGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGACTCCCATCTGCCCTCACAGGACATGCTCACGCCCAATCTTGAAAGCTACGAGCTTGCTTGCTTCTaGCCACCTTGCGGACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: LDSHLPSQDMLTPNLESYELACF*PPCGHL Trigger: AAGGTGTCCGCAAGGTGGCAAGAAGCAAGCAAGCTC...GTAGCTTTCAAGATTGGGCGTGAGCATGTCCTGTGAGGGCAGATGGGAGTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | GAGGGAGAAGGTGCTCAGGTGCTAGGTAAAGCTTACTaGTCAGCAGCCCAGACTCCACCACTGTTCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGEGAQVLGKAY*SAAQTPPLFLV Trigger: GACAAGGAACAGTGGTGGAGTCTGGGCTGCTGATCAGTAAGCTTTACCTAGCACCTGAGCACCTTCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | AAAGTCAGGCTGCTATGCCGGACATGCTCTGCCCCATaGCAGGGCCAAGGAGAAGATTGTCACTTGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVRLLCRTCSAP*QGQGEDCHLKV Trigger: CACTTTCAAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAGAGCATGTCCGGCATAGCAGCCTGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTGGATCACTAACCATCCACATCCCTATAAACCACTaGGGCATGCTCCCTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QGWTLTRRPVSCGSLTIHIPINH*GMLPLG Trigger: CCCAAGAGGGAGCATGCCCAAGTGGTTTATAGGGAT...GTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | ATCACTCCAGGTACTTTCACAAAAGTACCCTGGCCCTaGTCCAGGATTGACTGTTGCCCTAGGTGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ITPGTFTKVPWP*SRIDCCPRCSS Trigger: GCTGGAGCACCTAGGGCAACAGTCAATCCTGGATCAGGGCCAGGGTACTTTTGTGAAAGTACCTGGAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | CTATCCCTAATTAGCTGGCCCTGCAGAGAGGTGTGTTaGTTGTTTAGCTTTGCCAGAGGCCATCACTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLISWPCREVC*LFSFARGHHSR Trigger: CCTGGAGTGATGGCCTCTGGCAAAGCTAAACAACCAACACACCTCTCTGCAGGGCCAGCTAATTAGGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | TCAGGGCTGGACACTGACCAGAAGGCCTGTATCATGTaGATCACTAACCATCCACTGGAAGCCAGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLDTDQKACIM*ITNHPLEARTA Trigger: TGCTGTTCTGGCTTCCAGTGGATGGTTAGTGATCCACATGATACAGGCCTTCTGGTCAGTGTCCAGCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | AGCCCTGGACTAGCTCTGGGAATGGAAGAGGGAAATTaGAAGCAGAGTCCCCTTTCAAACCTCCACATGACC | + |
|
Preference number: 3 (lower is better) Translates to: SPGLALGMEEGN*KQSPLSNLHMT Trigger: GGTCATGTGGAGGTTTGAAAGGGGACTCTGCTTCCAATTTCCCTCTTCCATTCCCAGAGCTAGTCCAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCCCTCTTTGTGCCCTATCTTCTCCCTATCTCTGCAAGGGAGTCCCATGATAGAGAGGTGTGTTGGTaGTTTAGCTTTGCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSLFVPYLLPISARESHDREVCW*FSFARG Trigger: GCCTCTGGCAAAGCTAAACAACCAACACACCTCTCT...ATCATGGGACTCCCTTGCAGAGATAGGGAGAAGATAGGGCACAAAGAGGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | CTGCCCCATGGCAGGGCCAAGGAGAAGATTGTCACTTaGAAGTGGGAACACTTAATGGATGACAGACAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LPHGRAKEKIVT*KWEHLMDDRQH Trigger: GTGTTGTCTGTCATCCATTAAGTGTTCCCACTTTCAAGTGACAATCTTCTCCTTGGCCCTGCCATGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | CCCACGTTACCCTATCATTGCACTCACAGTACAGGCTaGCAGGACAGAACATGCACTGGTTATTTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTLPYHCTHSTG*QDRTCTGYFFL Trigger: CAGAAAGAAATAACCAGTGCATGTTCTGTCCTGCCAGCCTGTACTGTGAGTGCAATGATAGGGTAACGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAACAGTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTCCCAGTCTTACAAGCTaGTCAGATCTGTGCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LEQFHCSSVICPNSLLFPPSLTS*SDLCWV Trigger: GACCCAGCACAGATCTGACAAGCTTGTAAGACTGGG...AGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAACTGTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR GCA 72 bp | AGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTaGTCTGTGACTTGTCTTGCAGTCTTCTATGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSSFPFHPSRL*SVTCLAVFYVK Trigger: CTTCACATAGAAGACTGCAAGACAAGTCACAGAGCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CCA 72 bp | CAGGACATGCTCACGCCCAATCTTGAAAGCTACTTTTaGTATCCACTCAGGGTTAGTTGTTCTGTCATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QDMLTPNLESYF*YPLRVSCSVID Trigger: GTCAATGACAGAACAACTAACCCTGAGTGGATACCAAAAGTAGCTTTCAAGATTGGGCGTGAGCATGTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | TTACTGTTTCCTGACCAGGTCAAGGTGGGGAATTGCTaGGTACCTACCCTGTTCTTTTATATACACTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLFPDQVKVGNC*VPTLFFYIHCP Trigger: TGGACAGTGTATATAAAAGAACAGGGTAGGTACTCAGCAATTCCCCACCTTGACCTGGTCAGGAAACAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAACAGTTCCACTGCAGTTCAGTAATTTGTCCAAATTCCTTACTGTTTCCTCTCCACCACTGTTCCTaGTCTTTGGTCTGTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEQFHCSSVICPNSLLFPLHHCS*SLVCLE Trigger: TTCTAGACAGACCAAAGACAAGGAACAGTGGTGGAG...AGGAAACAGTAAGGAATTTGGACAAATTACTGAACTGCAGTGGAACTGTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | AGAGCCACTGAAAACACATATCCTTACTCAACCAGCTaGAGGGTCACTGTAGCTAAATTCAAAGAAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RATENTYPYSTS*RVTVAKFKERN Trigger: GTTCCTTTCTTTGAATTTAGCTACAGTGACCCTTCAGCTGGTTGAGTAAGGATATGTGTTTTCAGTGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR TCA 72 bp | GACAGAACATGCACTGGTTATTTCTTTCTGCACTCATaGTCAATCAAGAGGAAACACCTTCTGTTAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DRTCTGYFFLHS*SIKRKHLLLES Trigger: GCTTTCTAACAGAAGGTGTTTCCTCTTGATTGATCATGAGTGCAGAAAGAAATAACCAGTGCATGTTCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCAGTGCCAAAGCTAGAGCCAGGCTCTACTAGCCCACGTTACCCTATCAGCGTGGGGTCCCAATaGCTAAGCAGCGCGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PEAVPKLEPGSTSPRYPISVGSQ*LSSAAP Trigger: CGGGGCCGCGCTGCTTAGCCATTGGGACCCCACGCT...GATAGGGTAACGTGGGCTAGTAGAGCCTGGCTCTAGCTTTGGCACTGCCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CAA 72 bp | AAGTCTCCAGAGTCCCAGCCACAATCCCTCGAGCCATaGGCTGTCCATGCTCACAAATCCCCAGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSPESQPQSLEP*AVHAHKSPGMG Trigger: CCCCATCCCTGGGGATTTGTGAGCATGGACAGCCAATGGCTCGAGGGATTGTGGCTGGGACTCTGGAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR TCA 90 bp | TATCATTGCACTCACAGTACAGGCTGGCAGGACAGAACATGCACTGGTTATTTCCGTCCCAGTCCGAGCTaGGCGTGGGGTCCCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YHCTHSTGWQDRTCTGYFRPSPS*AWGPNG Trigger: GCCATTGGGACCCCACGCTCAGCTCGGACTGGGACG...GAAATAACCAGTGCATGTTCTGTCCTGCCAGCCTGTACTGTGAGTGCAATGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCTCTTTGTGCCCTATCTTCTCCCTATCTCTGCAAGGGAGTCCCATGATCACAGACTGCAACCCTaGTGGTCTCGTGCCGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLFVPYLLPISARESHDHRLQP*WSRAGY Trigger: GTATCCGGCACGAGACCATCAGGGTTGCAGTCTGTG...ATCATGGGACTCCCTTGCAGAGATAGGGAGAAGATAGGGCACAAAGAGGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAATGGATGACAGACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCCAGGGCAGGGGCACTTaGCCTCCATCATGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLMDDRQHWTHRPKASSAQGRGT*PPSCHR Trigger: TCTGTGACATGATGGAGGGCAAGTGCCCCTGCCCTG...GGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGTCTGTCATCCATTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CAA 72 bp | TCCCTAATTAGCTGGCCCTGCAGAGAGGTGTGTTGGTaGTTTAGCTTTGCCAGAGGCCATCACTCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLISWPCREVCW*FSFARGHHSRY Trigger: GTACCTGGAGTGATGGCCTCTGGCAAAGCTAAACAACCAACACACCTCTCTGCAGGGCCAGCTAATTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CAA 72 bp | AGTTCTCTGCTTTCTGCCCTCCCAAGAGGTCCCTCTTaGTGCCCTATCTTCTCCCTATCTCTGCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSALPRGPS*CPIFSLSLQGS Trigger: ACTCCCTTGCAGAGATAGGGAGAAGATAGGGCACAAAGAGGGACCTCTTGGGAGGGCAGAAAGCAGAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR TCA 90 bp | TCTACCTGTAACCTAAAATTCGGAGGAAATGGTGTGAGGGAGAAGGTGCTCAGGCCGTTGTCATCAGTTTaGCCCGAGGTGGGTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: STCNLKFGGNGVREKVLRPLSSV*PEVGGW Trigger: CCATCCACCCACCTCGGGTCAAACTGATGACAACGG...CCTGAGCACCTTCTCCCTCACACCATTTCCTCCGAATTTTAGGTTACAGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR TCA 90 bp | TCTACCTGTAACCTAAAATTCGGAGGAAATGGTGTGAGGGAGAAGGTGCTCAGGACCCTCAGGCTCCCATaGAGGTCTGTCTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: STCNLKFGGNGVREKVLRTLRLP*RSVSVP Trigger: TGGGACAGAGACAGACCTTCATGGGAGCCTGAGGGT...CCTGAGCACCTTCTCCCTCACACCATTTCCTCCGAATTTTAGGTTACAGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAATGGATGACAGACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCGATGCAGGCGATCTTTaGAGGCCACCTCATAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLMDDRQHWTHRPKASSADAGDL*RPPHRS Trigger: ACTTCTATGAGGTGGCCTGCAAAGATCGCCTGCATC...GGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGTCTGTCATCCATTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR GCA 90 bp | CACTTAATGGATGACAGACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCCTGTCCCAGAGGAGCTaGTATCAGAGTCCATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLMDDRQHWTHRPKASSALSQRS*YQSPFQ Trigger: CTGAAATGGACTCTGATAGCAGCTCCTCTGGGACAG...GGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGTCTGTCATCCATTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| 3UTR CAA 72 bp | GCTGGCCCTGCAGAGAGGTGTGTTGGTTGTTTAGCTTaGCCAGAGGCCATCACTCCAGGTACTTTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGPAERCVGCLA*PEAITPGTFTK Trigger: TTTTGTGAAAGTACCTGGAGTGATGGCCTCTGGCAAAGCTAAACAACCAACACACCTCTCTGCAGGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCCCCACCCAAACTCCCAGATATCCCTATAAACCACTTGGGCATGCTCCCCACAACGAACATTCCTaGAGGAGGCTCCTTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: STPTQTPRYPYKPLGHAPHNEHS*RRLLIN Trigger: ATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTG...GGGAGCATGCCCAAGTGGTTTATAGGGATATCTGGGAGTTTGGGTGGGGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | TTACCGTGCTCCACCCCAAGAAAACCACCCTCATTGACTACTATTCAGGACAATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPCSTPRKPPSLTTIQDNQFDPR*VDGIVR Trigger: CCTGACTATCCCATCCACCCACCTCGGGTCAAACTG...ATTGTCCTGAATAGTAGTCAATGAGGGTGGTTTTCTTGGGGTGGAGCACGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTCCCTATCTCTGCAAGGGAGTCCCATGATCCACAAGTCAGAGACCTTTCATCATGTCACAGACTaGAACCCTGATGGTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSLQGSPMIHKSETFHHVTD*NPDGLV Trigger: CACGAGACCATCAGGGTTGCAGTCTGTGACATGATG...AAAGGTCTCTGACTTGTGGATCATGGGACTCCCTTGCAGAGATAGGGAGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | TCAAGCTCTTCCTCATTTCCTTTCCACCCTAGCAGACTTTGCTCTGTGACTTGTGATGGGATAGTCAGGTaGACACCGAAAGACGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSFPFHPSRLCSVTCDGIVR*TPKDEQ Trigger: CTGTTCGTCTTTCGGTGTCCACCTGACTATCCCATC...ACAAGTCACAGAGCAAAGTCTGCTAGGGTGGAAAGGAAATGAGGAAGAGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAGTGCCTTCACATTTCATCTGTTTTGGAGGAAGCCTCTTTTATCCAGTTTCCTGTTCAAAGCCTaGTTCGTTGTGGTAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FRSAFTFHLFWRKPLLSSFLFKA*FVVVGI Trigger: AATCCCTACCACAACGAACCAGGCTTTGAACAGGAA...ACTGGATAAAAGAGGCTTCCTCCAAAACAGATGAAATGTGAAGGCACTTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAGTGCCTTCACATTTCATCTGTTTTGGAGGAAGCCTCTTTTATCCAGTGTTTTTGCTGTCTCCTaGATGTCTTTCCTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRSAFTFHLFWRKPLLSSVFAVS*MSFLFK Trigger: TTTGAACAGGAAAGACATCCAGGAGACAGCAAAAAC...ACTGGATAAAAGAGGCTTCCTCCAAAACAGATGAAATGTGAAGGCACTTCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CAA 90 bp | ACAGACAACACTGGACCCACAGACCAAAGGCATCCTCAGCCCTGGACTAGCTCTTCAGGGCAGGGGCACTaGCCCTCCATCATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TDNTGPTDQRHPQPWTSSSGQGH*PSIMSQ Trigger: CTGTGACATGATGGAGGGCAAGTGCCCCTGCCCTGA...AGAGCTAGTCCAGGGCTGAGGATGCCTTTGGTCTGTGGGTCCAGTGTTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS TCA 90 bp | CAGGGCAGGGGCACTTGCCCTCCATCATGTCACAGACTGCAACCCTaGTGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGRGTCPPSCHRLQP*WSRAGYIHYSFCCL Trigger: GAGACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGGGTTGCAGTCTGTGACATGATGGAGGGCAAGTGCCCCTGCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS CCA 90 bp | CGTTGTCATCAGTTTGACCCGAGGTGGGTGGATGGGATAGTCAGGTaGACACCGAAAGACGAACAGGAAGAAACCCCCTTCATAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCHQFDPRWVDGIVR*TPKDEQEETPFIRS Trigger: ACTCCTTATGAAGGGGGTTTCTTCCTGTTCGTCTTTCGGTGTCCACCTGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS CCA 90 bp | AAACCTCACTGTGTTATTGCCCGTTGTCATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCAGGTGGACACCGAAAGACGAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPHCVIARCHQFDPR*VDGIVRWTPKDEQE Trigger: TTCCTGTTCGTCTTTCGGTGTCCACCTGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACAGTGAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
||
| CDS-3UTR CAA 90 bp | CTTGACTCCCATCTGCCCTCACAGGACATGCTCACGCCCAATCTTGAAAGCTACCTGCATAGTTTGGCCTaGAAGATGCAGGCGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSHLPSQDMLTPNLESYLHSLA*KMQAIF Trigger: AAAGATCGCCTGCATCTTCAAGGCCAAACTATGCAG...GTAGCTTTCAAGATTGGGCGTGAGCATGTCCTGTGAGGGCAGATGGGAGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS GCA 90 bp | AGACCCTCAGGCTCCCATGAAGGTCTGTCTCTGTCCCAGAGGAGCTaGTATCAGAGTCCATTTCAGCATTTTCATTATGGAGCCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: RPSGSHEGLSLSQRS*YQSPFQHFHYGAFP Trigger: TGGAAAGGCTCCATAATGAAAATGCTGAAATGGACTCTGATAGCAGCTCCTCTGGGACAGAGACAGACCTTCATGGGAGCCTGAGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 90 bp | GTCCCAGAGGAGCTGCTATCAGAGTCCATTTCAGCATTTTCATTATaGAGCCTTTCCAGCACTTTCTGTCGAATCAGTCCGAGGCGCATC | + |
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Preference number: 5 (lower is better) Translates to: VPEELLSESISAFSL*SLSSTFCRISPRRI Trigger: GATGCGCCTCGGACTGATTCGACAGAAAGTGCTGGAAAGGCTCCATAATGAAAATGCTGAAATGGACTCTGATAGCAGCTCCTCTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS-3UTR CAA 90 bp | AGGGTCACTGTAGCTAAATTCAAAGAAAGGAACAGCTCCAGTGACAAAGAGGGACCCGTTGTCATCAGTTaGACCCGAGGTGGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: RVTVAKFKERNSSSDKEGPVVIS*TRGGWM Trigger: CATCCACCCACCTCGGGTCAAACTGATGACAACGGG...TCCCTCTTTGTCACTGGAGCTGTTCCTTTCTTTGAATTTAGCTACAGTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 90 bp | ATGAATCTTAGTCATGTCAACAGTGTCGGGCACAACGAACATTCCTaGAGGAGGCTCCTTATAAATGGACATGATATCCCGCTTAATCCG | + |
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Preference number: 5 (lower is better) Translates to: MNLSHVNSVGHNEHS*RRLLINGHDIPLNP Trigger: CGGATTAAGCGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTGCCCGACACTGTTGACATGACTAAGATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 90 bp | CCGAAAGACGAACAGGAAGAAACCCCCTTCATAAGGAGTGTCAAATaGGCCTGTGATCAAAGCATGAATCTTAGTCATGTCAACAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PKDEQEETPFIRSVK*ACDQSMNLSHVNSV Trigger: GACACTGTTGACATGACTAAGATTCATGCTTTGATCACAGGCCCATTTGACACTCCTTATGAAGGGGGTTTCTTCCTGTTCGTCTTTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS-3UTR CAA 90 bp | CTATTCAGGACAATCTGTAAGAGACTATTTTATGTAGTGGCTCAAATCCCACACAGGGTCCTGCATAGTTaGGCCTTGAAGATGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LFRTICKRLFYVVAQIPHRVLHS*ALKMQA Trigger: CGCCTGCATCTTCAAGGCCAAACTATGCAGGACCCT...GTGTGGGATTTGAGCCACTACATAAAATAGTCTCTTACAGATTGTCCTGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | GCTAACGCCGACCACACCGGCAACACCACTCGACCCTaGGCCCGCCGCCCCGGCGCCAGCCGTCGCCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: ANADHTGNTTRP*ARRPGASRRRR Trigger: GCGACGGCGACGGCTGGCGCCGGGGCGGCGGGCCCAGGGTCGAGTGGTGTTGCCGGTGTGGTCGGCGTTAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | TCGCCGTCCCAGTCCGAGCTGAGCGTGGGGTCCCAATaGCTAAGCAGCGCGGCCCCGTGGGCAGCGGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SPSQSELSVGSQ*LSSAAPWAAAE Trigger: CTCGGCCGCTGCCCACGGGGCCGCGCTGCTTAGCCATTGGGACCCCACGCTCAGCTCGGACTGGGACGGCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS GCA 72 bp | AGGGCAGGGGCACTTGCCCTCCATCATGTCACAGACTaGAACCCTGATGGTCTCGTGCCGGATACATTCATT | + |
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Preference number: 6 (lower is better) Translates to: RAGALALHHVTD*NPDGLVPDTFI Trigger: AATGAATGTATCCGGCACGAGACCATCAGGGTTGCAGTCTGTGACATGATGGAGGGCAAGTGCCCCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | CAGTTTGACCCGAGGTGGGTGGATGGGATAGTCAGGTaGACACCGAAAGACGAACAGGAAGAAACCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QFDPRWVDGIVR*TPKDEQEETPF Trigger: GAAGGGGGTTTCTTCCTGTTCGTCTTTCGGTGTCCACCTGACTATCCCATCCACCCACCTCGGGTCAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | TGTGTTATTGCCCGTTGTCATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCAGGTGGACACCGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: CVIARCHQFDPR*VDGIVRWTPKD Trigger: GTCTTTCGGTGTCCACCTGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CAA 72 bp | CCGCTTCTCTCCAAAAGGGTCCTGCATAGTTTGGCCTaGAAGATGCAGGCGATCTTTGCAGGCCACCTCATA | + |
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Preference number: 6 (lower is better) Translates to: PLLSKRVLHSLA*KMQAIFAGHLI Trigger: TATGAGGTGGCCTGCAAAGATCGCCTGCATCTTCAAGGCCAAACTATGCAGGACCCTTTTGGAGAGAAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS TCA 72 bp | GGCACTTGCCCTCCATCATGTCACAGACTGCAACCCTaGTGGTCTCGTGCCGGATACATTCATTATAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GTCPPSCHRLQP*WSRAGYIHYSF Trigger: AAAACTATAATGAATGTATCCGGCACGAGACCATCAGGGTTGCAGTCTGTGACATGATGGAGGGCAAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | AGTCATGTCAACAGTGTCGGGCACAACGAACATTCCTaGAGGAGGCTCCTTATAAATGGACATGATATCCCG | + |
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Preference number: 6 (lower is better) Translates to: SHVNSVGHNEHS*RRLLINGHDIP Trigger: CGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTGCCCGACACTGTTGACATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | GAGCTGCTATCAGAGTCCATTTCAGCATTTTCATTATaGAGCCTTTCCAGCACTTTCTGTCGAATCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: ELLSESISAFSL*SLSSTFCRISP Trigger: CGGACTGATTCGACAGAAAGTGCTGGAAAGGCTCCATAATGAAAATGCTGAAATGGACTCTGATAGCAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | GAACAGGAAGAAACCCCCTTCATAAGGAGTGTCAAATaGGCCTGTGATCAAAGCATGAATCTTAGTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: EQEETPFIRSVK*ACDQSMNLSHV Trigger: GACATGACTAAGATTCATGCTTTGATCACAGGCCCATTTGACACTCCTTATGAAGGGGGTTTCTTCCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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| CDS CCA 72 bp | GTGCCGGATACATTCATTATAGTTTTTGCTGTCTCCTaGATGTCTTTCCTGTTCAAAGCCTGGTTCGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: VPDTFIIVFAVS*MSFLFKAWFVV Trigger: CACAACGAACCAGGCTTTGAACAGGAAAGACATCCAGGAGACAGCAAAAACTATAATGAATGTATCCGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100528.5 |
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