Pregenerated sensors for UBE2W (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025939Ensembl transcript IDs: ENSMUST00000117146.9, ENSMUST00000182554.9
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGACCTGGAACTCACCAAATGGACCAGGCTGGCCTCAAATTCTTTaGGATCCACCTACCTTTGCCTCCCAATGGCTGAGATTAAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: TTWNSPNGPGWPQIL*DPPTFASQWLRLKA Trigger: TGCTTTTAATCTCAGCCATTGGGAGGCAAAGGTAGGTGGATCTCAAAGAATTTGAGGCCAGCCTGGTCCATTTGGTGAGTTCCAGGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 90 bp | CTGTCCAAAGGAGAACAAAGAAGGGCCAAAGGAAGCCATGTTATTTaGGTTAAGCCAGTATACAGTTCAGTTAGGACAAGCAGCCACATG | + |
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Preference number: 1 (lower is better) Translates to: LSKGEQRRAKGSHVI*VKPVYSSVRTSSHM Trigger: CATGTGGCTGCTTGTCCTAACTGAACTGTATACTGGCTTAACTCAAATAACATGGCTTCCTTTGGCCCTTCTTTGTTCTCCTTTGGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 90 bp | TTTGAGTTAAGCCAGTATACAGTTCAGTTAGGACAAGCAGCCACATaGCATTGGGTTGGATGTTACAGAAAGACCAAGGAAGCCCATGAT | + |
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Preference number: 1 (lower is better) Translates to: FELSQYTVQLGQAAT*HWVGCYRKTKEAHD Trigger: ATCATGGGCTTCCTTGGTCTTTCTGTAACATCCAACCCAATGTCATGTGGCTGCTTGTCCTAACTGAACTGTATACTGGCTTAACTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR CAA 90 bp | GACGACCTGGAACTCACCAAATGGACCAGGCTGGCCTCAAATTCTTaGAGATCCACCTACCTTTGCCTCCCAATGGCTGAGATTAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: DDLELTKWTRLASNS*RSTYLCLPMAEIKS Trigger: GCTTTTAATCTCAGCCATTGGGAGGCAAAGGTAGGTGGATCTCAAAGAATTTGAGGCCAGCCTGGTCCATTTGGTGAGTTCCAGGTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCCCAATGGCTGAGATTAAAAGCATTTACCACCACGACCAGCAAGTCACACCTTCCTAAGGAGTaGTCCCTTGGCCAAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: FASQWLRLKAFTTTTSKSHLPKE*SLGQVT Trigger: AGTCACTTGGCCAAGGGACCACTCCTTAGGAAGGTG...TGACTTGCTGGTCGTGGTGGTAAATGCTTTTAATCTCAGCCATTGGGAGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCCTCCCAATGGCTGAGATTAAAAGCATTTACCACCACGACCAGCAAGTCCAAGGCTCCAAGAAATaGACAGGCCATGAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: LCLPMAEIKSIYHHDQQVQGSKK*TGHEQT Trigger: TGTCTGTTCATGGCCTGTGCATTTCTTGGAGCCTTG...GACTTGCTGGTCGTGGTGGTAAATGCTTTTAATCTCAGCCATTGGGAGGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR TCA 90 bp | GGTAGACAAAACCATCAGAACCTCATGGTAGCTTCTAAGGACTGGGATTATGGGTTTCCTGTAGACCTCTaGGTCCTCCTCTACCAATGT | + |
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Preference number: 2 (lower is better) Translates to: GRQNHQNLMVASKDWDYGFPVDL*VLLYQC Trigger: ACATTGGTAGAGGAGGACTCAGAGGTCTACAGGAAA...CCCATAATCCCAGTCCTTAGAAGCTACCATGAGGTTCTGATGGTTTTGTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACAGCATGTCGGTTGACTaGACTGAACCAGCGATCAAC | + |
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Preference number: 2 (lower is better) Translates to: IHTLLFTPSLQRLRSIYNSMSVD*TEPAIN Trigger: GTTGATCGCTGGTTCAGTCCAGTCAACCGACATGCT...GTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACGGAAGTCACTGTTATTaGACAATACACGAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: IHTLLFTPSLQRLRSIYNGSHCY*TIHEDL Trigger: CAGGTCCTCGTGTATTGTGCAATAACAGTGACTTCC...GTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAGGGCCAAAGGAAGCCATGTTATTTGAGTTAAGCCAGTATACAGTTCAGACTACTCTAACATTATaGATCTCCAAAGGCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: KEGPKEAMLFELSQYTVQTTLTL*ISKGQT Trigger: AGTTTGGCCTTTGGAGATCCATAATGTTAGAGTAGT...CTGAACTGTATACTGGCTTAACTCAAATAACATGGCTTCCTTTGGCCCTTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR CCA 90 bp | CACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACAAAGCATTAATCACCAAGTaGCAGGAGTTAAGAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: HTLLFTPSLQRLRSIYNKALITK*QELRKL Trigger: GAGTTTTCTTAACTCCTGCCACTTGGTGATTAATGC...TTTGTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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| 3UTR CCA 72 bp | GAGTGGTCCCTTGGCCAAGTGACTGACCTGCCCAACTaGGATCAGCTCATAAGGAAGGAGACAATGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: EWSLGQVTDLPN*DQLIRKETMEC Trigger: ACACTCCATTGTCTCCTTCCTTATGAGCTGATCCCAGTTGGGCAGGTCAGTCACTTGGCCAAGGGACCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 72 bp | AACTCACCAAATGGACCAGGCTGGCCTCAAATTCTTTaGGATCCACCTACCTTTGCCTCCCAATGGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: NSPNGPGWPQIL*DPPTFASQWLR Trigger: TCTCAGCCATTGGGAGGCAAAGGTAGGTGGATCTCAAAGAATTTGAGGCCAGCCTGGTCCATTTGGTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 72 bp | AACAAAAGGAAAGGCGGTTCTTTTCCTGTAGACCTCTaGGTCCTCCTCTACCAATGTAAACAAGGCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: NKRKGGSFPVDL*VLLYQCKQGSK Trigger: CTTGGAGCCTTGTTTACATTGGTAGAGGAGGACTCAGAGGTCTACAGGAAAAGAACCGCCTTTCCTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR GCA 72 bp | AGGCTGGCCTCAAATTCTTTGAGATCCACCTACCTTTaGCTCCCAATGGCTGAGATTAAAAGCATTTACCAC | + |
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Preference number: 3 (lower is better) Translates to: RLASNSLRSTYL*LPMAEIKSIYH Trigger: GTGGTAAATGCTTTTAATCTCAGCCATTGGGAGGCAAAGGTAGGTGGATCTCAAAGAATTTGAGGCCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 72 bp | AGCCAGTATACAGTTCAGTTAGGACAAGCAGCCACATaGCATTGGGTTGGATGTTACAGAAAGACCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQYTVQLGQAAT*HWVGCYRKTKE Trigger: TTCCTTGGTCTTTCTGTAACATCCAACCCAATGTCATGTGGCTGCTTGTCCTAACTGAACTGTATACTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCTCCCAATGGCTGAGATTAAAAGCATTTACCACCACGACCAGCAAGTCAAAACTGGAAACAGAATaGATCCAGGACATGATGGAA | + |
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Preference number: 3 (lower is better) Translates to: FASQWLRLKAFTTTTSKSKLETE*IQDMME Trigger: TTCCATCATGTCCTGGATCAATTCTGTTTCCAGTTT...TGACTTGCTGGTCGTGGTGGTAAATGCTTTTAATCTCAGCCATTGGGAGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR TCA 72 bp | GAAGCCCATGATACAAGCAAAAGCATTGTTAGGCTCTaGCCAGCTTCCAAAGGAACACAGAAAAGAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: EAHDTSKSIVRL*PASKGTQKRRK Trigger: TTTTCTTCTTTTCTGTGTTCCTTTGGAAGCTGGTCAGAGCCTAACAATGCTTTTGCTTGTATCATGGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| CDS-3UTR CCA 90 bp | GACAAGGTCTATGTAGCTCTGGACGACCTGGAACTCACCAAATGGACCAGGCTGAAACTCCAGTTCCAGTaGGTAAGAGTCCCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: DKVYVALDDLELTKWTRLKLQFQ*VRVPLL Trigger: CAGAAGAGGGACTCTTACCCACTGGAACTGGAGTTT...CAGCCTGGTCCATTTGGTGAGTTCCAGGTCGTCCAGAGCTACATAGACCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR CAA 72 bp | GAACTCACCAAATGGACCAGGCTGGCCTCAAATTCTTaGAGATCCACCTACCTTTGCCTCCCAATGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELTKWTRLASNS*RSTYLCLPMAE Trigger: CTCAGCCATTGGGAGGCAAAGGTAGGTGGATCTCAAAGAATTTGAGGCCAGCCTGGTCCATTTGGTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| CDS-3UTR GCA 90 bp | ATCCACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACCTGAGACAGACTGACTaGACTGAGAGCGCCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: IHTLLFTPSLQRLRSIYNLRQTD*TESAGD Trigger: GTCCCCGGCGCTCTCAGTGCAGTCAGTCTGTCTCAG...GTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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| CDS-3UTR GCA 90 bp | AACCTCATGGTAGCTTCTAAGGACTGGGATTATGGGAAGGAAAAGTATATTATACTGAGACAGACTGACTaGACTGAGAGCGCCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NLMVASKDWDYGKEKYIILRQTD*TESAGD Trigger: GTCCCCGGCGCTCTCAGTGCAGTCAGTCTGTCTCAG...TATAATATACTTTTCCTTCCCATAATCCCAGTCCTTAGAAGCTACCATGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| CDS-3UTR TCA 90 bp | GAGTCCTCCTCTACCAATGTAAACAAGGCTCCAAGAAATGCACAGGCCATGAACGCACTGTATCCACCATaGTACCACCATTTTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ESSSTNVNKAPRNAQAMNALYPP*YHHFVF Trigger: GAAAACAAAATGGTGGTATCATGGTGGATACAGTGC...GTTCATGGCCTGTGCATTTCTTGGAGCCTTGTTTACATTGGTAGAGGAGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| 3UTR CAA 72 bp | GTATACAGTTCAGTTAGGACAAGCAGCCACATGACATaGGGTTGGATGTTACAGAAAGACCAAGGAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VYSSVRTSSHMT*GWMLQKDQGSP Trigger: TGGGCTTCCTTGGTCTTTCTGTAACATCCAACCCAATGTCATGTGGCTGCTTGTCCTAACTGAACTGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGGCCAAAGGAAGCCATGTTATTTGAGTTAAGCCAGTATACAGTTCAGGATCCACTGCGTGATTaGATTCTGAACACTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KEGPKEAMLFELSQYTVQDPLRD*ILNTLF Trigger: GAAAAGAGTGTTCAGAATTCAATCACGCAGTGGATC...CTGAACTGTATACTGGCTTAACTCAAATAACATGGCTTCCTTTGGCCCTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182554.9 |
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| CDS-3UTR TCA 90 bp | ATCCACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACGATCCACTGCGTGATTaGATTCTGAACACTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: IHTLLFTPSLQRLRSIYNDPLRD*ILNTLF Trigger: GAAAAGAGTGTTCAGAATTCAATCACGCAGTGGATC...GTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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| CDS-3UTR TCA 90 bp | ATCCACACTCTATTATTCACACCTTCACTTCAGAGACTGAGGAGTATATACAACCAACAAGTGTCATCATaGTACCACCATTTTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: IHTLLFTPSLQRLRSIYNQQVSS*YHHFVF Trigger: GAAAACAAAATGGTGGTATCATGATGACACTTGTTG...GTTGTATATACTCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117146.9 |
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