Pregenerated sensors for UBE2QL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052981Ensembl transcript IDs: ENSMUST00000065118.7
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTATATGGAAATGGAGTGGGCGGGGCACTGAGTTCCCTCCGGGCTaGTCAAGGCTGCTGTCGTGGAAAGAAGCTAAGGGAGATTCGACA | + |
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Preference number: 1 (lower is better) Translates to: CIWKWSGRGTEFPPG*SRLLSWKEAKGDST Trigger: TGTCGAATCTCCCTTAGCTTCTTTCCACGACAGCAGCCTTGAGCAGCCCGGAGGGAACTCAGTGCCCCGCCCACTCCATTTCCATATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 90 bp | AGGGTGCTCTTGCCTCAAGTCAGGGACACACAAGTGACTAGTGGGTaGAGTAACAGACCGGGTCATGCAAGTCCCCTTGTGTCACCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RVLLPQVRDTQVTSG*SNRPGHASPLVSPG Trigger: ACCAGGTGACACAAGGGGACTTGCATGACCCGGTCTGTTACTTCACCCACTAGTCACTTGTGTGTCCCTGACTTGAGGCAAGAGCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 90 bp | AGTCCGACGACATCGGCAAAGGGGAAATTGTCTTCTTCTGGTGGCTaGGAGGAGACAGACACAGAAGCACTGTTGCTGGAGCGTTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: SPTTSAKGKLSSSGG*EETDTEALLLERSL Trigger: TAGGGAACGCTCCAGCAACAGTGCTTCTGTGTCTGTCTCCTCTCAGCCACCAGAAGAAGACAATTTCCCCTTTGCCGATGTCGTCGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 90 bp | ACACCACAGTTAGGGTGCTCTTGCCTCAAGTCAGGGACACACAAGTaGCTAGTGGGTGAAGTAACAGACCGGGTCATGCAAGTCCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: TPQLGCSCLKSGTHK*LVGEVTDRVMQVPL Trigger: CAAGGGGACTTGCATGACCCGGTCTGTTACTTCACCCACTAGTCACTTGTGTGTCCCTGACTTGAGGCAAGAGCACCCTAACTGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR GCA 90 bp | CCACAGGCCACAGAAAGAAAGATACATCTTCAAGTTATGTCGACCTaGCAGATAGAGAAACAGAGATCTCAGCAAACAGGGGCTGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: PQATERKIHLQVMST*QIEKQRSQQTGAGR Trigger: CCGGCCAGCCCCTGTTTGCTGAGATCTCTGTTTCTCTATCTGGCAGGTCGACATAACTTGAAGATGTATCTTTCTTTCTGTGGCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 90 bp | GGGAGGTGGACTGGGGAAAGTCGTCAACTCGCATGTGTTCTAAAGTaGCTTAGAGACGGTCATTTATTATGGAAATGTAATCCCAAACAG | + |
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Preference number: 1 (lower is better) Translates to: GRWTGESRQLACVLK*LRDGHLLWKCNPKQ Trigger: CTGTTTGGGATTACATTTCCATAATAAATGACCGTCTCTAAGTCACTTTAGAACACATGCGAGTTGACGACTTTCCCCAGTCCACCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCGCAGCATCCCCTGCCTCTCATCAAATGGCACAGGTTTATCTTCGAACAGAGTGGGCGGGGCACTaGGTTCCCTCCGGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VAAASPASHQMAQVYLRTEWAGH*VPSGLL Trigger: GAGCAGCCCGGAGGGAACTCAGTGCCCCGCCCACTC...TGTTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAGGGGATGCTGCGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | GTCATGCAAGTCCCCTTGTGTCACCTGGTGTCCTTTGGCAGTTCTGGTGTCTCCGAAATTGTCTTCTTCTaGTGGCTGAGAGGAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VMQVPLCHLVSFGSSGVSEIVFF*WLRGDR Trigger: TCTGTCTCCTCTCAGCCACCAGAAGAAGACAATTTC...GGAGACACCAGAACTGCCAAAGGACACCAGGTGACACAAGGGGACTTGCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | GTCATGCAAGTCCCCTTGTGTCACCTGGTGTCCTTTGGCAGTTCTGGTGTCTCCCTGCCTCTCATCAAATaGCACAGGTTTATCTTCGAA | + |
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Preference number: 2 (lower is better) Translates to: VMQVPLCHLVSFGSSGVSLPLIK*HRFIFE Trigger: TTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAG...GGAGACACCAGAACTGCCAAAGGACACCAGGTGACACAAGGGGACTTGCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | CCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTCAGAGGAGATGGCAGGGTaGAGTGTGGACGGGCGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PIRFSTWNEHFTSVCMLSEEMAG*SVDGRL Trigger: GAGCCGCCCGTCCACACTCCACCCTGCCATCTCCTC...TGACAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCAAGTTATGTCGACCTGCCAGATAGAGAAACAGAGATCTCAGCAAACAAGAGGGGAGGTGGACTaGGGAAAGTCGTCAACTCGC | + |
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Preference number: 2 (lower is better) Translates to: HLQVMSTCQIEKQRSQQTRGEVD*GKSSTR Trigger: GCGAGTTGACGACTTTCCCCAGTCCACCTCCCCTCT...TGTTTGCTGAGATCTCTGTTTCTCTATCTGGCAGGTCGACATAACTTGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTGGGCAGAGGGGAGGTaGACTGGGGAAAGTCGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLWAEGR*TGESRQ Trigger: TTGACGACTTTCCCCAGTCCACCTCCCCTCTGCCCA...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR GCA 90 bp | CCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTCACAGTTAGGGTGCTCTTaGCTCAAGTCAGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: PIRFSTWNEHFTSVCMLSQLGCS*LKSGTH Trigger: GTGTGTCCCTGACTTGAGGCAAGAGCACCCTAACTG...TGACAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTCCCCTTGTGTCACCTaGTGTCCTTTGGCAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MCPIRFSTWNEHFTSVCMSPCVT*CPLAVL Trigger: CAGAACTGCCAAAGGACACCAGGTGACACAAGGGGA...CATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTGGAGTAGAAAAGGGTaGAAGATGCACAGCGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLWSRKG*KMHSGG Trigger: TCCACCGCTGTGCATCTTCCACCCTTTTCTACTCCA...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTCAGGGACACACAAGTaGCTAGTGGGTGAAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLSGTHK*LVGEVT Trigger: TGTTACTTCACCCACTAGTCACTTGTGTGTCCCTGA...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CCA 90 bp | GGAATGAACATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTGTCCTTTGGCAGTTCTaGTGTCTCCTGTCACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GMNILPLSACCHKHYLLIVLWQF*CLLSLA Trigger: TGCTAGTGACAGGAGACACCAGAACTGCCAAAGGAC...AATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAATGTTCATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCTTCTTAGAAGCATGTGTTCTAAAGTaGCTTAGAGACGGTCATTTA | + |
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Preference number: 2 (lower is better) Translates to: LSACCHKHYLLISWSFLEACVLK*LRDGHL Trigger: TAAATGACCGTCTCTAAGTCACTTTAGAACACATGC...TTCTAAGAAGCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 72 bp | GCCCCTTTGTATATGGAAATGGAGTGGGCGGGGCACTaGGTTCCCTCCGGGCTGCTCAAGGCTGCTGTCGTG | + |
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Preference number: 3 (lower is better) Translates to: APLYMEMEWAGH*VPSGLLKAAVV Trigger: CACGACAGCAGCCTTGAGCAGCCCGGAGGGAACTCAGTGCCCCGCCCACTCCATTTCCATATACAAAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR GCA 72 bp | AAATGGAGTGGGCGGGGCACTGAGTTCCCTCCGGGCTaGTCAAGGCTGCTGTCGTGGAAAGAAGCTAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: KWSGRGTEFPPG*SRLLSWKEAKG Trigger: TCCCTTAGCTTCTTTCCACGACAGCAGCCTTGAGCAGCCCGGAGGGAACTCAGTGCCCCGCCCACTCCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 72 bp | ACAGGGGCTGGCCGGCCCAGTGATGTGCGGCTCTCTTaGCTTGCTAACAGCCCCTTTGTATATGGAAATGGA | + |
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Preference number: 3 (lower is better) Translates to: TGAGRPSDVRLS*LANSPFVYGNG Trigger: TCCATTTCCATATACAAAGGGGCTGTTAGCAAGTCAAGAGAGCCGCACATCACTGGGCCGGCCAGCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR CCA 72 bp | GGTCATGCAAGTCCCCTTGTGTCACCTGGTGTCCTTTaGCAGTTCTGGTGTCTCCTGTCACTAGCACGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GHASPLVSPGVL*QFWCLLSLARK Trigger: CTTCCGTGCTAGTGACAGGAGACACCAGAACTGCCAAAGGACACCAGGTGACACAAGGGGACTTGCATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 72 bp | TTGCCTCAAGTCAGGGACACACAAGTGACTAGTGGGTaGAGTAACAGACCGGGTCATGCAAGTCCCCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LPQVRDTQVTSG*SNRPGHASPLV Trigger: CACAAGGGGACTTGCATGACCCGGTCTGTTACTTCACCCACTAGTCACTTGTGTGTCCCTGACTTGAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 72 bp | TTAGGGTGCTCTTGCCTCAAGTCAGGGACACACAAGTaGCTAGTGGGTGAAGTAACAGACCGGGTCATGCAA | + |
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Preference number: 3 (lower is better) Translates to: LGCSCLKSGTHK*LVGEVTDRVMQ Trigger: TTGCATGACCCGGTCTGTTACTTCACCCACTAGTCACTTGTGTGTCCCTGACTTGAGGCAAGAGCACCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR CCA 72 bp | GACGACATCGGCAAAGGGGAAATTGTCTTCTTCTGGTaGCTGAGAGGAGACAGACACAGAAGCACTGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: DDIGKGEIVFFW*LRGDRHRSTVA Trigger: AGCAACAGTGCTTCTGTGTCTGTCTCCTCTCAGCCACCAGAAGAAGACAATTTCCCCTTTGCCGATGTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR TCA 72 bp | ACTGGGGAAAGTCGTCAACTCGCATGTGTTCTAAAGTaGCTTAGAGACGGTCATTTATTATGGAAATGTAAT | + |
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Preference number: 3 (lower is better) Translates to: TGESRQLACVLK*LRDGHLLWKCN Trigger: ATTACATTTCCATAATAAATGACCGTCTCTAAGTCACTTTAGAACACATGCGAGTTGACGACTTTCCCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR-3UTR CAA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGGTAATCCCAAACAGTTaGCTCTTTCTCTCTGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLVIPNS*LFLSVN Trigger: GTTTACAGAGAGAAAGAGCAAACTGTTTGGGATTAC...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | GCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGGGCGGCTCGAGAGTGTCTGGAGCGATGCGCTCTGCTaGCCGCCGCCTCCGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: AVEEMAGWSVDGRLESVWSDALC*PPPPPR Trigger: CCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCT...CCAGACACTCTCGAGCCGCCCGTCCACACTCCACCCTGCCATCTCCTCCACCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | ATGCACAGCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGGGCGGCTCGAGAGGGCTGCGCACCTGTGTaGAGTGCTGCTGGCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: MHSGGGDGRVECGRAAREGCAPV*SAAGAP Trigger: CGGCGCGCCAGCAGCACTGCACACAGGTGCGCAGCC...CTCTCGAGCCGCCCGTCCACACTCCACCCTGCCATCTCCTCCACCGCTGTGCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | TGCACAGCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGGGCGGCTCGAGAGTTCGGTGTCCCGGTTGTaGAGGCGAATGAGCCCGATT | + |
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Preference number: 4 (lower is better) Translates to: CTAVEEMAGWSVDGRLESSVSRL*RRMSPI Trigger: AATCGGGCTCATTCGCCTGCACAACCGGGACACCGA...ACTCTCGAGCCGCCCGTCCACACTCCACCCTGCCATCTCCTCCACCGCTGTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | AAAAGGGTGGAAGATGCACAGCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGGGGTGCTGCTGTTGCTaGTGCTGCTTGTGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRVEDAQRWRRWQGGVWTGCCCC*CCLWPL Trigger: CAGCGGCCACAAGCAGCAGCAGCAACAGCAGCACCC...CGTCCACACTCCACCCTGCCATCTCCTCCACCGCTGTGCATCTTCCACCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | AAAAGGGTGGAAGATGCACAGCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGCTGCAGATCCGTCCCTaGCCCTTGACCAGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: KRVEDAQRWRRWQGGVWTLQIRP*PLTRLA Trigger: TGCCAGCCTGGTCAAGGGCCAGGGACGGATCTGCAG...CGTCCACACTCCACCCTGCCATCTCCTCCACCGCTGTGCATCTTCCACCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | GTGGCCGCAGCATCCCCTGCCTCTCATCAAATGGCACAGGTTTATCTTCGAACAACCTGTGTGCAGTGCTaGTGGCGCGCCGCGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: VAAASPASHQMAQVYLRTTCVQC*WRAAGT Trigger: AGTGCCCGCGGCGCGCCAGCAGCACTGCACACAGGT...TGTTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAGGGGATGCTGCGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | TGGCCGCAGCATCCCCTGCCTCTCATCAAATGGCACAGGTTTATCTTCGAACAGTGTGTGCAGTGCTGCTaGCGCGCCGCGGGCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: WPQHPLPLIKWHRFIFEQCVQCC*RAAGTR Trigger: CCTAGTGCCCGCGGCGCGCCAGCAGCACTGCACACA...CTGTTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAGGGGATGCTGCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | GGCTGCTCAAGGCTGCTGTCGTGGAAAGAAGCTAAGGGAGATTCGACAGGTGGGAGGCTGGCAGCAAACTaGCGCATGACGGCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GCSRLLSWKEAKGDSTGGRLAAN*RMTAST Trigger: GGTGGAGGCCGTCATGCGCCAGTTTGCTGCCAGCCT...CCCACCTGTCGAATCTCCCTTAGCTTCTTTCCACGACAGCAGCCTTGAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | GTCACCTGGTGTCCTTTGGCAGTTCTGGTGTCTCCTGTCACTAGCACGGAAGACGGTTGTGGTGGTGCTTaGGGTCCTCGGTGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: VTWCPLAVLVSPVTSTEDGCGGA*GPRCPG Trigger: ACCGGGACACCGAGGACCCCAAGCACCACCACAACC...GTCTTCCGTGCTAGTGACAGGAGACACCAGAACTGCCAAAGGACACCAGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR TCA 90 bp | CGGCAAAGGGGAAATTGTCTTCTTCTGGTGGCTGAGAGGAGACAGACACAGAAGTCCGTCCCTGGCCCTTaGCCAGGCTGGCAGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: RQRGNCLLLVAERRQTQKSVPGP*PGWQQT Trigger: AGTTTGCTGCCAGCCTGGTCAAGGGCCAGGGACGGA...CTTCTGTGTCTGTCTCCTCTCAGCCACCAGAAGAAGACAATTTCCCCTTTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | GGCTGCTCAAGGCTGCTGTCGTGGAAAGAAGCTAAGGGAGATTCGACAGGTGGGGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GCSRLLSWKEAKGDSTGGESLST*CSFTFQ Trigger: CTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTC...CCCACCTGTCGAATCTCCCTTAGCTTCTTTCCACGACAGCAGCCTTGAGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| 3UTR CAA 72 bp | GGGTCATGCAAGTCCCCTTGTGTCACCTGGTGTCCTTaGGCAGTTCTGGTGTCTCCTGTCACTAGCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSCKSPCVTWCP*AVLVSPVTSTE Trigger: TTCCGTGCTAGTGACAGGAGACACCAGAACTGCCAAAGGACACCAGGTGACACAAGGGGACTTGCATGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTTTGCCGCGCAGCGATaGGCTCTGCTGGCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLFAAQR*ALLAAA Trigger: GGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAA...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | GGAATGAACATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTCGCACCTGTGTGCAGTaGTGCTGGCGCGCCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GMNILPLSACCHKHYLLIRTCVQ*CWRAAG Trigger: GCCCGCGGCGCGCCAGCAGCACTGCACACAGGTGCG...AATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAATGTTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | CATCTTCAAGTTATGTCGACCTGCCAGATAGAGAAACAGAGATCTCAGCAAACAAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: HLQVMSTCQIEKQRSQQTRRAMS*SSFMSR Trigger: GCGGCTCATGAAGGAGCTCCAGGACATCGCGCGCCT...TGTTTGCTGAGATCTCTGTTTCTCTATCTGGCAGGTCGACATAACTTGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCTTCTTAGAACCTGAGCCCCCGGGGTaGTGCTGTTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSACCHKHYLLISWSFLEPEPPG*CCCCCC Trigger: GCAGCAGCAGCAACAGCAGCACCCCGGGGGCTCAGG...TTCTAAGAAGCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCTTCTTAGAAGCTTACTCTTGCCCTTaGCGGGCCCCGGGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSACCHKHYLLISWSFLEAYSCP*RAPGWR Trigger: ACGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGC...TTCTAAGAAGCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGCCGCCTCCGCCACGGTaGTTGTGGTGGTGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLPPPPR*LWWCLG Trigger: CCCCAAGCACCACCACAACCACCGTGGCGGAGGCGG...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR TCA 90 bp | GGAATGAACATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTACCAGCCGCGCGGCGTaGGCAGCTCCATGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GMNILPLSACCHKHYLLITSRAA*AAPCRW Trigger: CCATCTGCATGGAGCTGCTCACGCCGCGCGGCTGGT...AATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAATGTTCATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR TCA 90 bp | TTCATAAATAACTTAAGTGTGTCCTTTGCATTCAGAACACAGTTCTGGCTGGAGCAGCAAACTGGCGCATaGCGGCCTCCACCGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FINNLSVSFAFRTQFWLEQQTGA*RPPPCR Trigger: CCTACACGGTGGAGGCCGTCATGCGCCAGTTTGCTG...CTCCAGCCAGAACTGTGTTCTGAATGCAAAGGACACACTTAAGTTATTTATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | ATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCGAGCCCCCGGGGTGCTaGTGTTGCTGCTGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILPLSACCHKHYLLISWSEPPGC*CCCCCL Trigger: CAAGCAGCAGCAGCAACAGCAGCACCCCGGGGGCTC...GCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | ATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCCGGTGGTTGTGGTGGTaGTTGGGGTCCTCGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILPLSACCHKHYLLISWSRWLWW*LGSSVS Trigger: GGACACCGAGGACCCCAAGCACCACCACAACCACCG...GCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | CATCTTCAAGTTATGTCGACCTGCCAGATAGAGAAACAGAGATCTCAGCAAACAGTCTCCTTCATGTCCTaGCACAGCACCGAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLQVMSTCQIEKQRSQQTVSFMS*HSTESL Trigger: CAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGAC...TGTTTGCTGAGATCTCTGTTTCTCTATCTGGCAGGTCGACATAACTTGAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | TTAGAGACGGTCATTTATTATGGAAATGTAATCCCAAACAGTTTGCTCTTTCTCGCTGCTTGTGGCCGCTaGTCTTACCACCACCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LETVIYYGNVIPNSLLFLAACGR*SYHHLC Trigger: GCAAAGGTGGTGGTAAGAGCAGCGGCCACAAGCAGC...GAGAAAGAGCAAACTGTTTGGGATTACATTTCCATAATAAATGACCGTCTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCTTCTTAGAATCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: LSACCHKHYLLISWSFLESLSTW*SFTFQS Trigger: CGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGA...TTCTAAGAAGCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR GCA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGCAAACTCTTAAAGGTTaGTTCAGCTTCCTTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLQTLKG*FSFLAA Trigger: AGCCGCAAGGAAGCTGAAGCAACCTTTAAGAGTTTG...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 90 bp | TGGCCGCTGCTCTTACCACCACCTTTGCCGCGCAGCGATGCGCTCTaGTGGCCGCCGCCTCCGCCACGGTGGTTGTGGTGGTGCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: WPLLLPPPLPRSDAL*WPPPPPRWLWWCLG Trigger: CCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 90 bp | ACCAGCTCCACCGAGATGAAGCGGTCGCTGAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGCCGGCTGCGCACCTGTGTGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: TSSTEMKRSLRRAMS*SSFMSRRLRTCVQC Trigger: GCACTGCACACAGGTGCGCAGCCGGCGGCTCATGAAGGAGCTCCAGGACATCGCGCGCCTCAGCGACCGCTTCATCTCGGTGGAGCTGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | ATGCACAGCGGTGGAGGAGATGGCAGGGTGGAGTGTGGACGGGCGGCTCGAGAGCACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: MHSGGGDGRVECGRAAREHSTES*STWCSF Trigger: GAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTG...CTCTCGAGCCGCCCGTCCACACTCCACCCTGCCATCTCCTCCACCGCTGTGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | TGGCCGCAGCATCCCCTGCCTCTCATCAAATGGCACAGGTTTATCTTCGAACAGCGCTTACTCTTGCCCTaGCCGGGCCCCGGGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: WPQHPLPLIKWHRFIFEQRLLLP*PGPGLA Trigger: CGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGCG...CTGTTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAGGGGATGCTGCGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | CGGCAAAGGGGAAATTGTCTTCTTCTGGTGGCTGAGAGGAGACAGACACAGAAGGCCGCGCGCTTACTCTaGCCCTTGCCGGGCCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RQRGNCLLLVAERRQTQKAARLL*PLPGPG Trigger: CCCGGGGCCCGGCAAGGGCAAGAGTAAGCGCGCGGC...CTTCTGTGTCTGTCTCCTCTCAGCCACCAGAAGAAGACAATTTCCCCTTTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 90 bp | GTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCGAAGAGGTTCTCGTTTACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSFMSCHSTESLSTW*SFTFQSKRFSFTSS Trigger: GGAGCTGGTAAACGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 90 bp | GTGAGGTTGAGCAGGATGAACTCTGTGTTGGTCTCCTTCATGTCCTaGCACAGCACCGAGTCCTTGTCCACCTGGTGCAGCTTCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRLSRMNSVLVSFMS*HSTESLSTWCSFTF Trigger: GAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACAGAGTTCATCCTGCTCAACCTCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 90 bp | TTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAGTCGAAGAGGTTCTCGTTTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSFMSCHSTESLST*CSFTFQSKRFSFTS Trigger: GCTGGTAAACGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGGGAGATTCGACAGGTGGGCAGAGGGGAGGTGGACTGGGGAAAGTCGAGGATGAACTCTGTGTaGGTCTCCTTCATGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLREIRQVGRGEVDWGKSRMNSV*VSFMSC Trigger: GCAGGACATGAAGGAGACCAACACAGAGTTCATCCT...CGACTTTCCCCAGTCCACCTCCCCTCTGCCCACCTGTCGAATCTCCCTTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | TTCATAAATAACTTAAGTGTGTCCTTTGCATTCAGAACACAGTTCTGGCTGGAGCCTCCGCCACGGTGGTaGTGGTGGTGCTTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FINNLSVSFAFRTQFWLEPPPRW*WWCLGS Trigger: GGACCCCAAGCACCACCACAACCACCGTGGCGGAGG...CTCCAGCCAGAACTGTGTTCTGAATGCAAAGGACACACTTAAGTTATTTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | ATTTTACCTCTGTCTGCATGTTGTCATAAACATTATCTCCTCATTTCATGGAGCATCCGTCCCTGGCCCTaGACCAGGCTGGCAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILPLSACCHKHYLLISWSIRPWP*TRLAAN Trigger: GTTTGCTGCCAGCCTGGTCAAGGGCCAGGGACGGAT...GCTCCATGAAATGAGGAGATAATGTTTATGACAACATGCAGACAGAGGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS-3UTR CAA 90 bp | TGTCCAATAAGATTTTCCACTTGGAATGAACATTTTACCTCTGTCTGCATGTTGTCGGGGAAGGTGAGGTaGAGCAGGATGAACTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPIRFSTWNEHFTSVCMLSGKVR*SRMNSV Trigger: CACAGAGTTCATCCTGCTCAACCTCACCTTCCCCGA...CAACATGCAGACAGAGGTAAAATGTTCATTCCAAGTGGAAAATCTTATTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | GCGCGGCCAGTTCCGCCGCGCGCTTACTCTTGCCCTTaGCGGGCCCCGGGCTGGCGTCGCCTGAGCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ARPVPPRAYSCP*RAPGWRRLSPR Trigger: CCGGGGGCTCAGGCGACGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGCGCGCGGCGGAACTGGCCGCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | CGCGCGGCCAGTTCCGCCGCGCGCTTACTCTTGCCCTaGCCGGGCCCCGGGCTGGCGTCGCCTGAGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RAASSAARLLLP*PGPGLASPEPP Trigger: CGGGGGCTCAGGCGACGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGCGCGCGGCGGAACTGGCCGCGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | TGTCGCGCGCGGCCAGTTCCGCCGCGCGCTTACTCTTaGCCTTGCCGGGCCCCGGGCTGGCGTCGCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRARPVPPRAYS*PCRAPGWRRLS Trigger: GCTCAGGCGACGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGCGCGCGGCGGAACTGGCCGCGCGCGACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | TTCATGAGCCGCCGGCTGCGCACCTGTGTGCAGTGCTaGTGGCGCGCCGCGGGCACTAGGCTGCCGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FMSRRLRTCVQC*WRAAGTRLPPA Trigger: GGCGGGCGGCAGCCTAGTGCCCGCGGCGCGCCAGCAGCACTGCACACAGGTGCGCAGCCGGCGGCTCATGAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | TTGTCGCGCGCGGCCAGTTCCGCCGCGCGCTTACTCTaGCCCTTGCCGGGCCCCGGGCTGGCGTCGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSRAASSAARLL*PLPGPGLASPE Trigger: CTCAGGCGACGCCAGCCCGGGGCCCGGCAAGGGCAAGAGTAAGCGCGCGGCGGAACTGGCCGCGCGCGACAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | TCCTTCATGAGCCGCCGGCTGCGCACCTGTGTGCAGTaGTGCTGGCGCGCCGCGGGCACTAGGCTGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFMSRRLRTCVQ*CWRAAGTRLPP Trigger: GGGCGGCAGCCTAGTGCCCGCGGCGCGCCAGCAGCACTGCACACAGGTGCGCAGCCGGCGGCTCATGAAGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | GCGCTCTGCTGGCCGCCGCCTCCGCCACGGTGGTTGTaGTGGTGCTTGGGGTCCTCGGTGTCCCGGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALCWPPPPPRWL*WCLGSSVSRLC Trigger: GCACAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | AGCGATGCGCTCTGCTGGCCGCCGCCTCCGCCACGGTaGTTGTGGTGGTGCTTGGGGTCCTCGGTGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SDALCWPPPPPR*LWWCLGSSVSR Trigger: CCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | TGCTGGCCGCCGCCTCCGCCACGGTGGTTGTGGTGGTaGTTGGGGTCCTCGGTGTCCCGGTTGTGCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CWPPPPPRWLWW*LGSSVSRLCRR Trigger: TCGCCTGCACAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | GCCGCTGCTCTTACCACCACCTTTGCCGCGCAGCGATaGGCTCTGCTGGCCGCCGCCTCCGCCACGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAALTTTFAAQR*ALLAAASATVV Trigger: AACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | CTCTGCTGGCCGCCGCCTCCGCCACGGTGGTTGTGGTaGTGCTTGGGGTCCTCGGTGTCCCGGTTGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCWPPPPPRWLW*CLGSSVSRLCR Trigger: CCTGCACAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | GATGCGCTCTGCTGGCCGCCGCCTCCGCCACGGTGGTaGTGGTGGTGCTTGGGGTCCTCGGTGTCCCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DALCWPPPPPRW*WWCLGSSVSRL Trigger: CAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 90 bp | CTGGCGTCGCCTGAGCCCCCGGGGTGCTGCTGTTGCTGCTGCTGCTaGTGGCCGCTGCTCTTACCACCACCTTTGCCGCGCAGCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LASPEPPGCCCCCCC*WPLLLPPPLPRSDA Trigger: CGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGCCACAAGCAGCAGCAGCAACAGCAGCACCCCGGGGGCTCAGGCGACGCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | CTCTTACCACCACCTTTGCCGCGCAGCGATGCGCTCTaGTGGCCGCCGCCTCCGCCACGGTGGTTGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPPPLPRSDAL*WPPPPPRWLWW Trigger: CCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | GCTGCTGCTTGTGGCCGCTGCTCTTACCACCACCTTTaGCGCGCAGCGATGCGCTCTGCTGGCCGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAACGRCSYHHL*RAAMRSAGRRL Trigger: GAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGCCACAAGCAGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | TTACCACCACCTTTGCCGCGCAGCGATGCGCTCTGCTaGCCGCCGCCTCCGCCACGGTGGTTGTGGTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPPLPRSDALC*PPPPPRWLWWC Trigger: GCACCACCACAACCACCGTGGCGGAGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | TGGCCGCCGCCTCCGCCACGGTGGTTGTGGTGGTGCTaGGGGTCCTCGGTGTCCCGGTTGTGCAGGCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: WPPPPPRWLWWC*GSSVSRLCRRM Trigger: CATTCGCCTGCACAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGTGGCGGAGGCGGCGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | TGCTGCTGCTTGTGGCCGCTGCTCTTACCACCACCTTaGCCGCGCAGCGATGCGCTCTGCTGGCCGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CCCLWPLLLPPP*PRSDALCWPPP Trigger: AGGCGGCGGCCAGCAGAGCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGCCACAAGCAGCAGCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | CGGGGTGCTGCTGTTGCTGCTGCTGCTTGTGGCCGCTaGTCTTACCACCACCTTTGCCGCGCAGCGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGAAVAAAACGR*SYHHLCRAAMR Trigger: GCGCATCGCTGCGCGGCAAAGGTGGTGGTAAGAGCAGCGGCCACAAGCAGCAGCAGCAACAGCAGCACCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | ACCGAGATGAAGCGGTCGCTGAGGCGCGCGATGTCCTaGAGCTCCTTCATGAGCCGCCGGCTGCGCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TEMKRSLRRAMS*SSFMSRRLRTC Trigger: ACAGGTGCGCAGCCGGCGGCTCATGAAGGAGCTCCAGGACATCGCGCGCCTCAGCGACCGCTTCATCTCGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CCA 72 bp | TTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTaGTGCAGCTTCACGTTCCAGTCGAAGAGGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: FMSCHSTESLST*CSFTFQSKRFS Trigger: CGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | TTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTCACGTTCCAGTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVSFMSCHSTES*STWCSFTFQSK Trigger: CTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 72 bp | TCGGGGAAGGTGAGGTTGAGCAGGATGAACTCTGTGTaGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGKVRLSRMNSV*VSFMSCHSTES Trigger: GGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACAGAGTTCATCCTGCTCAACCTCACCTTCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 90 bp | AACTCTGTGTTGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTaGTCCACCTGGTGCAGCTTCACGTTCCAGTCGAAGAGGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NSVLVSFMSCHSTES*STWCSFTFQSKRFS Trigger: CGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACAGAGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS CAA 90 bp | GGGAAGTTATCGGGGAAGGTGAGGTTGAGCAGGATGAACTCTGTGTaGGTCTCCTTCATGTCCTGCCACAGCACCGAGTCCTTGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GKLSGKVRLSRMNSV*VSFMSCHSTESLST Trigger: GGTGGACAAGGACTCGGTGCTGTGGCAGGACATGAAGGAGACCAACACAGAGTTCATCCTGCTCAACCTCACCTTCCCCGATAACTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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| CDS GCA 72 bp | ATGTCCTGCCACAGCACCGAGTCCTTGTCCACCTGGTaGAGCTTCACGTTCCAGTCGAAGAGGTTCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MSCHSTESLSTW*SFTFQSKRFSF Trigger: AAACGAGAACCTCTTCGACTGGAACGTGAAGCTGCACCAGGTGGACAAGGACTCGGTGCTGTGGCAGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065118.7 |
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