Pregenerated sensors for UBE2Q1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042572Ensembl transcript IDs: ENSMUST00000038356.13, ENSMUST00000196726.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTTGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTaGAGGCAGGTGGTCCCACAGCAAGCTCAAAGAGGGAGATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GLAVPCLCHFSLPPV*RQVVPQQAQRGRCR Trigger: CCTGCATCTCCCTCTTTGAGCTTGCTGTGGGACCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 90 bp | GGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTaGTTGGGATTAGAGGAAACCTCATGCATCCAGGAGCCAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GQEGREPVSYSRSAG*LGLEETSCIQEPGH Trigger: GTGCCCTGGCTCCTGGATGCATGAGGTTTCCTCTAATCCCAAGCAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 90 bp | TCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTGCAGGCAGGTaGTCCCACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTAC | + |
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Preference number: 1 (lower is better) Translates to: SLASVTSVFLQSAGR*SHSKLKEGDAGSMY Trigger: GTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGTGGGACCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 90 bp | CCGGCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACTACACAATaGAACCACATTGAGCTACTGTTTCCAGTAGACCCACAACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: PAVQFLELSRGPTTQ*NHIELLFPVDPQLG Trigger: CCCAAGTTGTGGGTCTACTGGAAACAGTAGCTCAATGTGGTTGCATTGTGTAGTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 90 bp | ATCCAGGCAACTGTTCCAGGGCTGGGTTTCCTAAGCTCCAGGACTTaGCTTGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: IQATVPGLGFLSSRT*LGCPLPLSLQSSSS Trigger: ACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCAAGCCAAGTCCTGGAGCTTAGGAAACCCAGCCCTGGAACAGTTGCCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 90 bp | TGTAGTTCAGCAAGCCAGACTGTTCCAAAGAGTTTAGGTACTGGTTaGTCCAGAGGCCTTCGGGAGAAATCTAGGGTCAGATCAGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: CSSASQTVPKSLGTG*SRGLREKSRVRSGE Trigger: CTCGCCTGATCTGACCCTAGATTTCTCCCGAAGGCCTCTGGAGCAACCAGTACCTAAACTCTTTGGAACAGTCTGGCTTGCTGAACTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 90 bp | AGCAAGACATTCAAATCCCTAGAAGAGATGGGGAGTGGGGGAAGATaGCCAAACTCGAATGCCCATCTCAGAAGCATTAGCAAACATCCA | + |
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Preference number: 1 (lower is better) Translates to: SKTFKSLEEMGSGGR*PNSNAHLRSISKHP Trigger: TGGATGTTTGCTAATGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCTCTTCTAGGGATTTGAATGTCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 90 bp | AGCTCACAGTACACGTTACTAAAAACACAATCTACATGCCAGCCCTaGCTGGTGTTAAGTTCAGAAGGAAGCCTTACAGGCTATGAGATA | + |
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Preference number: 1 (lower is better) Translates to: SSQYTLLKTQSTCQP*LVLSSEGSLTGYEI Trigger: TATCTCATAGCCTGTAAGGCTTCCTTCTGAACTTAACACCAGCCAGGGCTGGCATGTAGATTGTGTTTTTAGTAACGTGTACTGTGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGACTTCTCCCCGGCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACTCTGCAGCTTCTCCTTaGTACCAAAGCATGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LCRLLPGCAVPGAEPRSHSAASP*YQSMVG Trigger: GCCCACCATGCTTTGGTAGCAAGGAGAAGCTGCAGA...GTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGGGGAGAAGTCTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGACTTCTCCCCGGCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACATGTTTCTGGGCCTCTaGACTGTAGTTCAGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LCRLLPGCAVPGAEPRSHMFLGL*TVVQQA Trigger: GGCTTGCTGAACTACAGTGCAGAGGCCCAGAAACAT...GTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGGGGAGAAGTCTGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CAA 90 bp | CAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGCTaGGGATTAGAGGAAACCTCATGCATCCAGGAGCCAGGGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: QEGREPVSYSRSAGC*GLEETSCIQEPGHH Trigger: GTGGTGCCCTGGCTCCTGGATGCATGAGGTTTCCTCTAATCCCAAGCAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CAA 90 bp | AGGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTaGCTTGGGATTAGAGGAAACCTCATGCATCCAGGAGCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RTGRQGTSELQPLSR*LGIRGNLMHPGARA Trigger: TGCCCTGGCTCCTGGATGCATGAGGTTTCCTCTAATCCCAAGCAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CAA 90 bp | CATCCAGGCAACTGTTCCAGGGCTGGGTTTCCTAAGCTCCAGGACTaGGCTTGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HPGNCSRAGFPKLQD*AWLSLASVTSVFLQ Trigger: CTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCAAGCCAAGTCCTGGAGCTTAGGAAACCCAGCCCTGGAACAGTTGCCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCACTTGCTACCAAAGCATaGTGGGCCTGGCACCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KRWGVGEDGQTRMPISEALATKA*WAWHPS Trigger: GGAGGGGTGCCAGGCCCACCATGCTTTGGTAGCAAG...TGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR GCA 90 bp | ACCTCACCATGTATTAGCACCCCTAACCTGGTGGGTGTAGGCAGAATTAGAGCAAGTCTTCCTCCAGTCTaGAGGCAGGTGGTCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: TSPCISTPNLVGVGRIRASLPPV*RQVVPQ Trigger: CTGTGGGACCACCTGCCTGCAGACTGGAGGAAGACT...TGCTCTAATTCTGCCTACACCCACCAGGTTAGGGGTGCTAATACATGGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCAAAACCAGAGGCAGCGTaGGATCCAAACACAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: KRWGVGEDGQTRMPISEAKPEAA*DPNTAF Trigger: GAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTTT...TGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR TCA 90 bp | CCCACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTCGTCTGTAGTCAGTCTTaGGTACTTGAGACAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTASSKREMQAPCTACSLVCSQS*VLETVQ Trigger: CTGAACTGTCTCAAGTACTCAAGACTGACTACAGAC...GAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCATTAGCTCCATGTACTGCGTaGAGTCTCACAACAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RWGVGEDGQTRMPISEALAPCTA*SLTTAG Trigger: ACCTGCTGTTGTGAGACTGCACGCAGTACATGGAGC...TAATGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTCACAAAGGAGGCTCTAGTCTaGAGCACAGCTGAGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TASSKREMQAPCTACSLTKEALV*STAEFP Trigger: TGGAAACTCAGCTGTGCTCCAGACTAGAGCCTCCTT...TGTGAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTCTATGGAATGACTTATTCCCCTTGTATCCTCTGTGTCTCAACCTCACCGCGAGTGCTTCCGCTTaGCCTTTCTCTTGTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SVLWNDLFPLYPLCLNLTASASA*PFSCAS Trigger: GCTAGCACAAGAGAAAGGCCAAGCGGAAGCACTCGC...GGTGAGGTTGAGACACAGAGGATACAAGGGGAATAAGTCATTCCATAGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTGTATCCTCTGTGTCTCAACCTCACCATGTATTAGCACCCCTAACCTGACAATGCAACCACATTaGGCTACTGTTTCCAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SPCILCVSTSPCISTPNLTMQPH*ATVSSR Trigger: TCTACTGGAAACAGTAGCTCAATGTGGTTGCATTGT...CAGGTTAGGGGTGCTAATACATGGTGAGGTTGAGACACAGAGGATACAAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CCA 90 bp | GAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCACAAGGGTTCCAGCGAGGTaGTTGGTCTGTAGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ENKLKTHSIGKEALVWSTRVPAR*LVCSQS Trigger: AGACTGACTACAGACCAACCACCTCGCTGGAACCCT...TGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCAAACCAGAGGCAGCGTaGGATCCAAACACAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: RENKLKTHSIGKEALVWSKPEAA*DPNTAF Trigger: GAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTTT...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCTCAGTCTTGAGTACTTaGGACAGTTCAGTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: RENKLKTHSIGKEALVWSSVLST*DSSVCV Trigger: AACACACACTGAACTGTCTCAAGTACTCAAGACTGA...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCAGACTTCTCCCCGGCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACCTCTGCAGCTTCTCCTaGCTACCAAAGCATGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LCRLLPGCAVPGAEPRSHLCSFS*LPKHGG Trigger: CCCACCATGCTTTGGTAGCAAGGAGAAGCTGCAGAG...GTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGGGGAGAAGTCTGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR TCA 72 bp | CTGCAGACTTCTCCCCGGCTGTGCAGTTCCTGGAGCTaGGCCGAGGTCCCACTACACAATGCAACCACATTG | + |
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Preference number: 3 (lower is better) Translates to: LQTSPRLCSSWS*AEVPLHNATTL Trigger: CAATGTGGTTGCATTGTGTAGTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGGGGAGAAGTCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | GTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTaGAGGCAGGTGGTCCCACAGCAAGCTCAAAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: VPCLCHFSLPPV*RQVVPQQAQRG Trigger: CCCTCTTTGAGCTTGCTGTGGGACCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | CGCTCAGCAGGTTGCTTGGGATTAGAGGAAACCTCATaGATCCAGGAGCCAGGGCACCACCCCACTCAACTT | + |
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Preference number: 3 (lower is better) Translates to: RSAGCLGLEETS*IQEPGHHPTQL Trigger: AAGTTGAGTGGGGTGGTGCCCTGGCTCCTGGATGCATGAGGTTTCCTCTAATCCCAAGCAACCTGCTGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 72 bp | TCTGTCACTTCAGTCTTCCTCCAGTCTGCAGGCAGGTaGTCCCACAGCAAGCTCAAAGAGGGAGATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: SVTSVFLQSAGR*SHSKLKEGDAG Trigger: GCCTGCATCTCCCTCTTTGAGCTTGCTGTGGGACCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR CCA 72 bp | ACTGTTCCAGGGCTGGGTTTCCTAAGCTCCAGGACTTaGCTTGGCTGTCCCTTGCCTCTGTCACTTCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TVPGLGFLSSRT*LGCPLPLSLQS Trigger: AGACTGAAGTGACAGAGGCAAGGGACAGCCAAGCCAAGTCCTGGAGCTTAGGAAACCCAGCCCTGGAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | AGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTaGAGTCTCACAACAGCAGGTCCAACACTGGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SSKREMQAPCTA*SLTTAGPTLVA Trigger: AGCTACCAGTGTTGGACCTGCTGTTGTGAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | AGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTaGGTGCAGTCTCACAACAGCAGGTCCAACACTGGT | + |
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Preference number: 3 (lower is better) Translates to: SKLKEGDAGSMY*VQSHNSRSNTG Trigger: ACCAGTGTTGGACCTGCTGTTGTGAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | CCTTTCTCTTGTGCTAGCATCGAATTGCAGCCTCTCTaGAGCTTCTCCTTGCTACCAAAGCATGGTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PFSCASIELQPL*SFSLLPKHGGP Trigger: AGGCCCACCATGCTTTGGTAGCAAGGAGAAGCTGCAGAGAGGCTGCAATTCGATGCTAGCACAAGAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR TCA 72 bp | GCTGAGCCGAGGTCCCACTACACAATGCAACCACATTaGGCTACTGTTTCCAGTAGACCCACAACTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: AEPRSHYTMQPH*ATVSSRPTTWE Trigger: TTCCCAAGTTGTGGGTCTACTGGAAACAGTAGCTCAATGTGGTTGCATTGTGTAGTGGGACCTCGGCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | GCAAGCCAGACTGTTCCAAAGAGTTTAGGTACTGGTTaGTCCAGAGGCCTTCGGGAGAAATCTAGGGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: ASQTVPKSLGTG*SRGLREKSRVR Trigger: TCTGACCCTAGATTTCTCCCGAAGGCCTCTGGAGCAACCAGTACCTAAACTCTTTGGAACAGTCTGGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CAA 90 bp | TCAGTTCTATGGAATGACTTATTCCCCTTGTATCCTCTGTGTCTCAACCTCACCGAGTTTAGGTACTGGTaGCTCCAGAGGCCTTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: SVLWNDLFPLYPLCLNLTEFRYW*LQRPSG Trigger: TCCCGAAGGCCTCTGGAGCAACCAGTACCTAAACTC...GGTGAGGTTGAGACACAGAGGATACAAGGGGAATAAGTCATTCCATAGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR-3UTR CAA 90 bp | ACTCGAATGCCCATCTCAGAAGCATTAGCAAACATCCAGGCAACTGTTCCAGGGAGTGTGTGTTGTGGGTaGTTGTTTTTCCTTAGCGTT | + |
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Preference number: 3 (lower is better) Translates to: TRMPISEALANIQATVPGSVCCG*LFFLSV Trigger: AACGCTAAGGAAAAACAACAACCCACAACACACACT...CCCTGGAACAGTTGCCTGGATGTTTGCTAATGCTTCTGAGATGGGCATTCGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| 3UTR GCA 72 bp | AAAGAGGTACTAATAATCAGGATGTTTCTGGGCCTCTaGACTGTAGTTCAGCAAGCCAGACTGTTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KEVLIIRMFLGL*TVVQQARLFQR Trigger: TCTTTGGAACAGTCTGGCTTGCTGAACTACAGTGCAGAGGCCCAGAAACATCCTGATTATTAGTACCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGGGCAGGCGCTGGCAATaGGGAAGCGCTCGTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: EERTGRQGTSELQPLSRLGRRWQ*GSARGR Trigger: GCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCC...CAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCCTCTCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGCGTCCAGGCAGGCGCTaGCAATGCGGAAGCGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: EERTGRQGTSELQPLSRLRPGRR*QCGSAR Trigger: ACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACG...CAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCCTCTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR GCA 90 bp | TCCCACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTAGCCGGTCAGTGGCCTaGACCGAGCCAGACACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SHSKLKEGDAGSMYCVQSSRSVA*TEPDTA Trigger: TGCAGTGTCTGGCTCGGTGCAGGCCACTGACCGGCT...AGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR GCA 90 bp | TGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTGCAGGCAGGTGGGCACTGCTCCAGCCCTaGTTGGTGAGAAGTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: WLSLASVTSVFLQSAGRWALLQP*LVRSSM Trigger: CATGGAACTTCTCACCAAGCAGGGCTGGAGCAGTGC...CCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTCACAATGCGGAAGCGCTCGTaGCCGCGGTGGAAGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: TASSKREMQAPCTACSLTMRKRS*PRWKMD Trigger: GTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCAT...TGTGAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR GCA 90 bp | TGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTGCAGGCAGGTGGTTGTTGGCTCCAAACTaGACCCGTGCTTTCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WLSLASVTSVFLQSAGRWLLAPN*TRAFPF Trigger: GAAGGGGAAAGCACGGGTGCAGTTTGGAGCCAACAA...CCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR CCA 90 bp | AAGAGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCATCATCAGCCGGTCAGTaGCCTGCACCGAGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: KRWGVGEDGQTRMPISEASSAGQ*PAPSQT Trigger: TGTCTGGCTCGGTGCAGGCCACTGACCGGCTGATGA...TGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR TCA 90 bp | GAAGAGAGGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGTCTGCTGGCAAGGGCTaGTCCAGCATTTCCACATCA | + |
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Preference number: 4 (lower is better) Translates to: EERTGRQGTSELQPLSRLSAGKG*SSISTS Trigger: TGATGTGGAAATGCTGGATCAGCCCTTGCCAGCAGA...CAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCCTCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR CCA 90 bp | AACCAGAGGCAGCGTGAGATCCAAACACAGCATTCAAAGGTAATTGGTCCAGTGCGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQRQREIQTQHSKVIGPVRSWPR*KMDSSS Trigger: GCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCG...CACTGGACCAATTACCTTTGAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| 3UTR CAA 72 bp | AACTGTTCCAGGGCTGGGTTTCCTAAGCTCCAGGACTaGGCTTGGCTGTCCCTTGCCTCTGTCACTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCSRAGFPKLQD*AWLSLASVTSV Trigger: GACTGAAGTGACAGAGGCAAGGGACAGCCAAGCCAAGTCCTGGAGCTTAGGAAACCCAGCCCTGGAACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | AAGAGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCAACACTTCTTCCTGCGTaGACTGCTCTGCTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRWGVGEDGQTRMPISEATLLPA*TALLAR Trigger: CCTTGCCAGCAGAGCAGTGCACGCAGGAAGAAGTGT...TGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | GCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTCACAACATCCAAACTGCACCCGTaGTTTCCCCTTCACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSKREMQAPCTACSLTTSKLHP*FPLHQR Trigger: ACGCTGGTGAAGGGGAAAGCACGGGTGCAGTTTGGA...TGTTGTGAGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| 3UTR CAA 72 bp | AGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGCTaGGGATTAGAGGAAACCTCATGCATCCAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REPVSYSRSAGC*GLEETSCIQEP Trigger: TGGCTCCTGGATGCATGAGGTTTCCTCTAATCCCAAGCAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | ACCTCACCATGTATTAGCACCCCTAACCTGGTGGGTGTAGGCAGAATTAGAGCACTGGAGACACAACCCTaGCGAACGGTGGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSPCISTPNLVGVGRIRALETQP*RTVGQR Trigger: CCTTTGACCCACCGTTCGTCAGGGTTGTGTCTCCAG...TGCTCTAATTCTGCCTACACCCACCAGGTTAGGGGTGCTAATACATGGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCTGGACCCCCAGTTGCTaGCCCGGCCCCGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RENKLKTHSIGKEALVWSWTPSC*PGPGCC Trigger: GCAGCAGCCGGGGCCGGGGCAGCAACTGGGGGTCCA...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTGAAGTTCCATGCAGATaGCACCTCCACCCAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSKLKEGDAGSMYCVQSEVPCR*HLHPEH Trigger: ATGTTCTGGGTGGAGGTGCCATCTGCATGGAACTTC...AGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTCCCTTGCCTCTGTCACTTCAGTCTTCCTCCAGTCTGCAGGCAGGTGGTATACTGAGATTTGTTaGCTCCAAACTGCACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSLASVTSVFLQSAGRWYTEIC*LQTAPV Trigger: CACGGGTGCAGTTTGGAGCCAACAAATCTCAGTATA...CCACCTGCCTGCAGACTGGAGGAAGACTGAAGTGACAGAGGCAAGGGACAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | ACTCGAATGCCCATCTCAGAAGCATTAGCAAACATCCAGGCAACTGTTCCAGGGTCCAGCCCTGCTTGGTaGGAAGTTCCATGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TRMPISEALANIQATVPGSSPAW*EVPCRW Trigger: CCATCTGCATGGAACTTCTCACCAAGCAGGGCTGGA...CCCTGGAACAGTTGCCTGGATGTTTGCTAATGCTTCTGAGATGGGCATTCGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | TCCCCTTGTATCCTCTGTGTCTCAACCTCACCATGTATTAGCACCCCTAACCTGCATCTTCAGACTTCTTaGCCTCGGCTGGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCILCVSTSPCISTPNLHLQTS*PRLALP Trigger: AGGAAGAGCCAGCCGAGGGCAAGAAGTCTGAAGATG...CAGGTTAGGGGTGCTAATACATGGTGAGGTTGAGACACAGAGGATACAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGGACAGGAAGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGATTCACGAGTTCGACTaGATAGTTTCCGCCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EERTGRQGTSELQPLSRLIHEFD*IVSAFE Trigger: TTCAAAGGCGGAAACTATGCAGTCGAACTCGTGAAT...CAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCTTCCTGTCCTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | ACTCGAATGCCCATCTCAGAAGCATTAGCAAACATCCAGGCAACTGTTCCAGGGATCGGTATATATCCCTaGGCTCCTTCATCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRMPISEALANIQATVPGIGIYP*APSSAG Trigger: ACCGGCTGATGAAGGAGCTCAGGGATATATACCGAT...CCCTGGAACAGTTGCCTGGATGTTTGCTAATGCTTCTGAGATGGGCATTCGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | TCCCACAGCAAGCTCAAAGAGGGAGATGCAGGCTCCATGTACTGCGTGCAGTCTCATAGTTTCCGCCTTTaGAACTCTGTGATCGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: SHSKLKEGDAGSMYCVQSHSFRL*NSVIGI Trigger: TATACCGATCACAGAGTTTCAAAGGCGGAAACTATG...AGACTGCACGCAGTACATGGAGCCTGCATCTCCCTCTTTGAGCTTGCTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | GCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACTACACAATGCAACCACATTATCCTCTTCAGATGCTaGAAGAGCAAAGTATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVQFLELSRGPTTQCNHIILFRC*KSKVFP Trigger: AGGGAATACTTTGCTCTTGCAGCATCTGAAGAGGAT...AATGTGGTTGCATTGTGTAGTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGAGCCGGTCAGTGGCCTaGACCGAGCCAGACACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKSRSVA*TEPDTA Trigger: TGCAGTGTCTGGCTCGGTGCAGGCCACTGACCGGCT...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGTCCGTGATGTTGCAGTaGATGCGGACGGGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKSVMLQ*MRTGSP Trigger: GGGGGACCCCGTCCGCATCCACTGCAACATCACGGA...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCTCATCAGCCGGTCAGTaGCCTGCACCGAGCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFSSAGQ*PAPSQT Trigger: TGTCTGGCTCGGTGCAGGCCACTGACCGGCTGATGA...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCCGTGCACTGCTCTGCTaGCAAGGGCTGATCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFRALLC*QGLIQH Trigger: ATGCTGGATCAGCCCTTGCCAGCAGAGCAGTGCACG...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR CCA 90 bp | AACCAGAGGCAGCGTGAGATCCAAACACAGCATTCAAAGGTAATTGGTCCAGTGGAAGTTCCATGCAGATaGCACCTCCACCCAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NQRQREIQTQHSKVIGPVEVPCR*HLHPEH Trigger: ATGTTCTGGGTGGAGGTGCCATCTGCATGGAACTTC...CACTGGACCAATTACCTTTGAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTTCTATGGAATGACTTATTCCCCTTGTATCCTCTGTGTCTCAACCTCACCCAGGGTATGATTCCGTaGTGTTGCAGTGGATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVLWNDLFPLYPLCLNLTQGMIP*CCSGCG Trigger: TCCGCATCCACTGCAACATCACGGAATCATACCCTG...GGTGAGGTTGAGACACAGAGGATACAAGGGGAATAAGTCATTCCATAGAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | AGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCATTATTCATCTTCATCTTCTaGAGACACTTCTTCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RWGVGEDGQTRMPISEALFIFIF*RHFFLR Trigger: ACGCAGGAAGAAGTGTCTTCAGAAGATGAAGATGAA...TAATGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR TCA 90 bp | TCCCCTTGTATCCTCTGTGTCTCAACCTCACCATGTATTAGCACCCCTAACCTGTTCTCCTTCAGGATCTaGAGATCATTGTGCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPCILCVSTSPCISTPNLFSFRI*RSLCKA Trigger: CGCTTTGCACAATGATCTTCAGATCCTGAAGGAGAA...CAGGTTAGGGGTGCTAATACATGGTGAGGTTGAGACACAGAGGATACAAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCTCCAAACTGCACCCGTaGTTTCCCCTTCACCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFSKLHP*FPLHQR Trigger: ACGCTGGTGAAGGGGAAAGCACGGGTGCAGTTTGGA...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | AACCAGAGGCAGCGTGAGATCCAAACACAGCATTCAAAGGTAATTGGTCCAGTGGCCTTTGAAACTCTGTaGTCGGTATATATCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQRQREIQTQHSKVIGPVAFETL*SVYIPE Trigger: CTCAGGGATATATACCGATCACAGAGTTTCAAAGGC...CACTGGACCAATTACCTTTGAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | AACCAGAGGCAGCGTGAGATCCAAACACAGCATTCAAAGGTAATTGGTCCAGTGTTCTCCTTCAGGATCTaGAGATCATTGTGCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQRQREIQTQHSKVIGPVFSFRI*RSLCKA Trigger: CGCTTTGCACAATGATCTTCAGATCCTGAAGGAGAA...CACTGGACCAATTACCTTTGAATGCTGTGTTTGGATCTCACGCTGCCTCTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCCTGGAGACACAACCCTaGCGAACGGTGGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RENKLKTHSIGKEALVWSLETQP*RTVGQR Trigger: CCTTTGACCCACCGTTCGTCAGGGTTGTGTCTCCAG...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGTCCAGCCCTGCTTGGTaGGAAGTTCCATGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKSSPAW*EVPCRW Trigger: CCATCTGCATGGAACTTCTCACCAAGCAGGGCTGGA...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGGGAGTGGGGGAAGATGGCCAAACTCGAATGCCCATCTCAGAAGCATTAATGATCCTCTTCAGATaGTGCAAGAGCAAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: RWGVGEDGQTRMPISEALMILFR*CKSKVF Trigger: GAATACTTTGCTCTTGCAGCATCTGAAGAGGATCAT...TAATGCTTCTGAGATGGGCATTCGAGTTTGGCCATCTTCCCCCACTCCCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGGCACTGCTCCAGCCCTaGTTGGTGAGAAGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKALLQP*LVRSSM Trigger: CATGGAACTTCTCACCAAGCAGGGCTGGAGCAGTGC...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCTTGTTGGCTCCAAACTaGACCCGTGCTTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFLLAPN*TRAFPF Trigger: GAAGGGGAAAGCACGGGTGCAGTTTGGAGCCAACAA...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| 3UTR CAA 72 bp | CAGCGAGGTGGTTGGTCTGTAGTCAGTCTTGAGTACTaGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRGGWSVVSLEY*RQFSVCCGLLF Trigger: AAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGACTACAGACCAACCACCTCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCCTTGTAGGACTGCTGTaGTCTCGTCAGGCTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFLVGLL*SRQAIL Trigger: CAGTATAGCCTGACGAGAGCACAGCAGTCCTACAAG...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | GAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCACACATCTTCAGACTTCTTaGCCTCGGCTGGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ENKLKTHSIGKEALVWSTHLQTS*PRLALP Trigger: AGGAAGAGCCAGCCGAGGGCAAGAAGTCTGAAGATG...TGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGCTTGTAGGACTGCTGTaGTCTCGTCAGGCTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKLVGLL*SRQAIL Trigger: CAGTATAGCCTGACGAGAGCACAGCAGTCCTACAAG...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCGCCTTTGAAACTCTGTaGTCGGTATATATCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFAFETL*SVYIPE Trigger: CTCAGGGATATATACCGATCACAGAGTTTCAAAGGC...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCTTGAGTACTTGAGACAGTTCAGTGTGTGTTGTGGGTTGTTGTTTTTCATTCACGAGTTCGACTaGATAGTTTCCGCCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLEYLRQFSVCCGLLFFIHEFD*IVSAFE Trigger: TTCAAAGGCGGAAACTATGCAGTCGAACTCGTGAAT...GAAAAACAACAACCCACAACACACACTGAACTGTCTCAAGTACTCAAGACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAATATAAGGAGGCTTGAGAGTTTCTTTATAAGAATGCCTGCTAGCAAGTATACTGAGATTTGTTaGCTCCAAACTGCACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNIRRLESFFIRMPASKYTEIC*LQTAPV Trigger: CACGGGTGCAGTTTGGAGCCAACAAATCTCAGTATA...CTTGCTAGCAGGCATTCTTATAAAGAAACTCTCAAGCCTCCTTATATTGCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCTTCATCTTCATCTTCTaGAGACACTTCTTCCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RENKLKTHSIGKEALVWSFIFIF*RHFFLR Trigger: ACGCAGGAAGAAGTGTCTTCAGAAGATGAAGATGAA...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR TCA 90 bp | GAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCACACATAGTTTCCGCCTTTaGAACTCTGTGATCGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ENKLKTHSIGKEALVWSTHSFRL*NSVIGI Trigger: TATACCGATCACAGAGTTTCAAAGGCGGAAACTATG...TGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCGGTTCTCTTTTCCGATaGCATCATCTTCAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RENKLKTHSIGKEALVWSGSLFR*HHLQTS Trigger: AGAAGTCTGAAGATGATGGCATCGGAAAAGAGAACC...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS-3UTR GCA 90 bp | GAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCACAGGTTCTCTTTTCCGATaGCATCATCTTCAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENKLKTHSIGKEALVWSTGSLFR*HHLQTS Trigger: AGAAGTCTGAAGATGATGGCATCGGAAAAGAGAACC...TGTGCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
||
| CDS CCA 90 bp | GGCAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTGGAAGATaGACTCGAGCAGCTTCAGCTCCCGCCTCAGGCAGGGCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRWQCGSARGRGGR*TRAASAPASGRALA Trigger: GGCCAGGGCCCTGCCTGAGGCGGGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS CCA 90 bp | TCGTCCAGGCAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGCTTCAGCTCCCGCCTCAGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRQALAMRKRSWPR*KMDSSSFSSRLRQG Trigger: GCCCTGCCTGAGGCGGGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
||
| CDS-3UTR CAA 90 bp | CTCTGCAGACTTCTCCCCGGCTGTGCAGTTCCTGGAGCTGAGCCGAGGTCCCACTATGATTCCGTGATGTaGCAGTGGATGCGGACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCRLLPGCAVPGAEPRSHYDSVM*QWMRTG Trigger: CCCCGTCCGCATCCACTGCAACATCACGGAATCATA...GTGGGACCTCGGCTCAGCTCCAGGAACTGCACAGCCGGGGAGAAGTCTGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGAACCAGTGAGTTACAGCCGCTCAGCAGGTTGCTTGGGATTAGAGGATCATCTTCAGACTTCTaGCCCTCGGCTGGCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RQGTSELQPLSRLLGIRGSSSDF*PSAGSS Trigger: GGAAGAGCCAGCCGAGGGCAAGAAGTCTGAAGATGA...TCCTCTAATCCCAAGCAACCTGCTGAGCGGCTGTAACTCACTGGTTCCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS GCA 90 bp | TCTCGTCAGGCTATACTGAGATTTGTTGGCTCCAAACTGCACCCGTaGTTTCCCCTTCACCAGCGTGGCGCTGATCTGCATGATCACGGA | + |
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Preference number: 5 (lower is better) Translates to: SRQAILRFVGSKLHP*FPLHQRGADLHDHG Trigger: TCCGTGATCATGCAGATCAGCGCCACGCTGGTGAAGGGGAAAGCACGGGTGCAGTTTGGAGCCAACAAATCTCAGTATAGCCTGACGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAAATAAATTAAAAACCCATAGCATAGGTAAGGAGGCTCTAGTCTGGAGCTCATCTTCAGACTTCTaGCCCTCGGCTGGCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RENKLKTHSIGKEALVWSSSSDF*PSAGSS Trigger: GGAAGAGCCAGCCGAGGGCAAGAAGTCTGAAGATGA...GCTCCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| CDS TCA 90 bp | CATCAGGATGCTGAGGGAGGTTGTAGAGTTTACACAGGTCAGAGATaGTCCTCTTCAGATGCTGCAAGAGCAAAGTATTCCCTTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: HQDAEGGCRVYTGQR*SSSDAARAKYSLSL Trigger: TAAAGAAAGGGAATACTTTGCTCTTGCAGCATCTGAAGAGGATCATCTCTGACCTGTGTAAACTCTACAACCTCCCTCAGCATCCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS CCA 72 bp | CAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGCTTCAGCTCCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QALAMRKRSWPR*KMDSSSFSSRL Trigger: GAGGCGGGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS GCA 72 bp | ACTCGCAGCTCAGCTCGTCCAGGCAGGCGCTGGCAATaGGGAAGCGCTCGTGGCCGCGGTGGAAGATGGACT | + |
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Preference number: 6 (lower is better) Translates to: TRSSARPGRRWQ*GSARGRGGRWT Trigger: AGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGAGCTGAGCTGCGAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS CCA 72 bp | TCGTCCAGGCAGGCGCTGGCAATGCGGAAGCGCTCGTaGCCGCGGTGGAAGATGGACTCGAGCAGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRQALAMRKRS*PRWKMDSSSFS Trigger: GCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038356.13 |
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| CDS GCA 72 bp | GCTATACTGAGATTTGTTGGCTCCAAACTGCACCCGTaGTTTCCCCTTCACCAGCGTGGCGCTGATCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: AILRFVGSKLHP*FPLHQRGADLH Trigger: ATGCAGATCAGCGCCACGCTGGTGAAGGGGAAAGCACGGGTGCAGTTTGGAGCCAACAAATCTCAGTATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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| CDS GCA 72 bp | TTCATGGATCTGCACCAAGGACTTGTAGGACTGCTGTaGTCTCGTCAGGCTATACTGAGATTTGTTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FMDLHQGLVGLL*SRQAILRFVGS Trigger: GGAGCCAACAAATCTCAGTATAGCCTGACGAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCCATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038356.13 ENSMUST00000196726.2 |
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