RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2O (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020802

Ensembl transcript IDs: ENSMUST00000082152.5

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTaGGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCA +
Preference number: 1 (lower is better)
Translates to: EQWPGKHGPPGPCPR*VFPRLCCPGGPGTA
Trigger: TGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 90 bp GTGTGGCGCAGGAGGGGCTGGGACGTGGGGAGGCTACTGTCAAGCTaGAGAGGAGAGGGACCGGGAACACTGCAGGAGCAGCCACACTTC +
Preference number: 1 (lower is better)
Translates to: VWRRRGWDVGRLLSS*RGEGPGTLQEQPHF
Trigger: GAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCTCCAGCTTGACAGTAGCCTCCCCACGTCCCAGCCCCTCCTGCGCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR GCA 90 bp GGAGAGGAGAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATaGAAGGCACGCCCACCCTCCTGCCATCTGCAGGTTCCTCAACAC +
Preference number: 1 (lower is better)
Translates to: GEERDREHCRSSHTS*KARPPSCHLQVPQH
Trigger: GTGTTGAGGAACCTGCAGATGGCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 90 bp CTGACTGGAGAGGCTGAGCCACCGGATGGGAGAGGCCCTTGTCGCTaGCCTGGTTTGTGCAGATGCTCCTGTCACCTCAGTGGGGATAAA +
Preference number: 1 (lower is better)
Translates to: LTGEAEPPDGRGPCR*PGLCRCSCHLSGDK
Trigger: TTTATCCCCACTGAGGTGACAGGAGCATCTGCACAAACCAGGCCAGCGACAAGGGCCTCTCCCATCCGGTGGCTCAGCCTCTCCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 90 bp CACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTaGGAAGGGACAGCTAGAGAACAAGTGCCAGGACTCTCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: HPPAICRFLNTPPLT*EGTAREQVPGLSAW
Trigger: CCAGGCAGAGAGTCCTGGCACTTGTTCTCTAGCTGTCCCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 90 bp TTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTaGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: FPRLCCPGGPGTAQV*SPLKADKTHHALAF
Trigger: AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 90 bp GGCCTGGTTTGTGCAGATGCTCCTGTCACCTCAGTGGGGATAAAATaGGGCTGGATGGAGCAGATAACAGGCAGGTCTGGGCAGGACTGC +
Preference number: 1 (lower is better)
Translates to: GLVCADAPVTSVGIK*GWMEQITGRSGQDC
Trigger: GCAGTCCTGCCCAGACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACAGGAGCATCTGCACAAACCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 90 bp TGTAGCCATTTCTGTCCAGGCAGCACATTCTCAACTCCGTTCACGTaGGGGCTGCAGCCTCTCCTGGTGTCCTATCCTCTCTTAGAGAGT +
Preference number: 1 (lower is better)
Translates to: CSHFCPGSTFSTPFT*GLQPLLVSYPLLES
Trigger: ACTCTCTAAGAGAGGATAGGACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTGGACAGAAATGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 90 bp AGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCTaGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAAGAGCA +
Preference number: 1 (lower is better)
Translates to: SGDKMRLDGADNRQV*AGLPLSLPSWTGRA
Trigger: TGCTCTTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp GGAGGTACAGGGGATGAGGGACCTGGTGTGTGGCGCAGGAGGGGCTGGGACGTGCAGCTAGAGAACAAGTaGCAGGACTCTCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGTGDEGPGVWRRRGWDVQLENK*QDSLPG
Trigger: CCCAGGCAGAGAGTCCTGGCACTTGTTCTCTAGCTG...CACGTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTCATCCCCTGTACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp ATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGCTGCCCCGCCTGGTTTGTGCAGATaGTCCTGTCACCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: MAHQAHVPGECSQGSAAPPGLCR*SCHLSG
Trigger: CCCACTGAGGTGACAGGAGCATCTGCACAAACCAGG...CGGGGCAGCAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CCA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTGGCGCAGGAGGGGCTaGGACGTGGGGAGGCTACTG +
Preference number: 2 (lower is better)
Translates to: PGTAQVWSPLKADKTHHAWRRRG*DVGRLL
Trigger: CAGTAGCCTCCCCACGTCCCAGCCCCTCCTGCGCCA...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR TCA 90 bp GGTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTACCCCACCTCTGACCTaGGAAGGGACAGCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: GECSQGSAAPVVLAQHRCTPPLT*EGTARE
Trigger: TTCTCTAGCTGTCCCTTCTCAGGTCAGAGGTGGGGT...ACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCAGTGCCAGGACTCTCTaGCTGGGGCGACGGGGAACC +
Preference number: 2 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVSARTL*LGRRGT
Trigger: GGTTCCCCGTCGCCCCAGGCAGAGAGTCCTGGCACT...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTAGCAGCCACACTTCATaGAAGGCACGCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: AQVWSPLKADKTHHALAFSSHTS*KARPPS
Trigger: GGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCT...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTAGGGCTATAACGCACTaGCAGGCCAGAGCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: AQVWSPLKADKTHHALAFRAITH*QARASH
Trigger: GTGGCTGGCTCTGGCCTGCCAGTGCGTTATAGCCCT...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR TCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATTGGAGGTACAGGGGATaGGGGACCTGGTGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYWRYRG*GTWCVA
Trigger: CGCCACACACCAGGTCCCTCATCCCCTGTACCTCCA...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTCTTCAGCATCAAACTTaGCGCAGGGAGGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: AQVWSPLKADKTHHALAFLQHQT*RREERA
Trigger: TGCCCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAG...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CCA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTATCACTGCCATCTTaGACTGGAAGAGCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: PGTAQVWSPLKADKTHHALSLPS*TGRARH
Trigger: GTGCCTTGCTCTTCCAGTCCAAGATGGCAGTGATAA...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR TCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATGACGGGGAACCTGAGTaGGTTCCCAGTGCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYDGEPE*VPSASG
Trigger: ACCTGAGGCACTGGGAACTCACTCAGGTTCCCCGTC...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CCA 90 bp AGGCATCCTCTCTACCTGGAGCTTCACATTATCAAAAGCTTAGAAACTTGTAAAGAGGGACCTGGTGTGTaGCGCAGGAGGGGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RHPLYLELHIIKSLETCKEGPGV*RRRGWD
Trigger: GTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTC...TTTACAAGTTTCTAAGCTTTTGATAATGTGAAGCTCCAGGTAGAGAGGATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR TCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCGCTGACTGGAGAGGCTaGGCCACCGGATGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLADWRG*ATGWER
Trigger: CCTCTCCCATCCGGTGGCTCAGCCTCTCCAGTCAGC...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR GCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCAGGTCTGGGCAGGACTaGCATTATCACTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLRSGQD*HYHCHL
Trigger: AAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCT...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp CCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTaGGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: PGKHGPPGPCPR*VFPRLCCPGGP
Trigger: AGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 72 bp AGGAGGGGCTGGGACGTGGGGAGGCTACTGTCAAGCTaGAGAGGAGAGGGACCGGGAACACTGCAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: RRGWDVGRLLSS*RGEGPGTLQEQ
Trigger: CTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCTCCAGCTTGACAGTAGCCTCCCCACGTCCCAGCCCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp AGTGCCAGGACTCTCTGCCTGGGGCGACGGGGAACCTaGGTGAGTTCCCAGTGCCTCAGGTGCCTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: SARTLCLGRRGT*VSSQCLRCLPL
Trigger: CAAAGGCAGGCACCTGAGGCACTGGGAACTCACTCAGGTTCCCCGTCGCCCCAGGCAGAGAGTCCTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 72 bp GAGGCTGAGCCACCGGATGGGAGAGGCCCTTGTCGCTaGCCTGGTTTGTGCAGATGCTCCTGTCACCTCAGT +
Preference number: 3 (lower is better)
Translates to: EAEPPDGRGPCR*PGLCRCSCHLS
Trigger: ACTGAGGTGACAGGAGCATCTGCACAAACCAGGCCAGCGACAAGGGCCTCTCCCATCCGGTGGCTCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp TCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTaGCTGGAGAGGCTGAGCCACCGGATGGGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: SDCPCRESISQG*LERLSHRMGEA
Trigger: GGCCTCTCCCATCCGGTGGCTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR GCA 72 bp TACTGTCAAGCTGGAGAGGAGAGGGACCGGGAACACTaGAGGAGCAGCCACACTTCATGCAAGGCACGCCCA +
Preference number: 3 (lower is better)
Translates to: YCQAGEERDREH*RSSHTSCKARP
Trigger: TGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCTCCAGCTTGACAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CAA 90 bp GTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTGATAGAACGCAGCATCTaGGGACACTTCTTGCACTTC +
Preference number: 3 (lower is better)
Translates to: VSVPKALLPRWSWHSTGVIERSI*GHFLHF
Trigger: GAAGTGCAAGAAGTGTCCCAAGATGCTGCGTTCTAT...CACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR GCA 72 bp GGGAGAGGCCCTTGTCGCTGGCCTGGTTTGTGCAGATaGTCCTGTCACCTCAGTGGGGATAAAATGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GRGPCRWPGLCR*SCHLSGDKMRL
Trigger: CAGCCTCATTTTATCCCCACTGAGGTGACAGGAGCATCTGCACAAACCAGGCCAGCGACAAGGGCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp GCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTaGGAAGGGACAGCTAGAGAACAAGTGCCAGGACTC +
Preference number: 3 (lower is better)
Translates to: AICRFLNTPPLT*EGTAREQVPGL
Trigger: GAGTCCTGGCACTTGTTCTCTAGCTGTCCCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp TTCTGTCCAGGCAGCACATTCTCAACTCCGTTCACGTaGGGGCTGCAGCCTCTCCTGGTGTCCTATCCTCTC +
Preference number: 3 (lower is better)
Translates to: FCPGSTFSTPFT*GLQPLLVSYPL
Trigger: GAGAGGATAGGACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTGGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR GCA 72 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTaGCATCTTGGACTGGAAGAGCAAGGCACCTGTAGC +
Preference number: 3 (lower is better)
Translates to: ITGRSGQDCHYH*HLGLEEQGTCS
Trigger: GCTACAGGTGCCTTGCTCTTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR GCA 72 bp TGGATGGAGCAGATAACAGGCAGGTCTGGGCAGGACTaGCATTATCACTGCCATCTTGGACTGGAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: WMEQITGRSGQD*HYHCHLGLEEQ
Trigger: TTGCTCTTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATCTGCTCCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CAA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATACTTCAGCATCAAACTaGCCGCAGGGAGGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYTSASN*PQGGEG
Trigger: GCCCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGT...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR TCA 72 bp TCCCAGTGCCTCAGGTGCCTGCCTTTGAAACATAACTaGGGGATAGAACGCAGCATCTTGGGACACTTCTTG +
Preference number: 3 (lower is better)
Translates to: SQCLRCLPLKHN*GIERSILGHFL
Trigger: CAAGAAGTGTCCCAAGATGCTGCGTTCTATCCCTCAGTTATGTTTCAAAGGCAGGCACCTGAGGCACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CCA 72 bp AAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCTaGGCAGGACTGCCATTATCACTGCCATCTTGGACT +
Preference number: 3 (lower is better)
Translates to: KMRLDGADNRQV*AGLPLSLPSWT
Trigger: AGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR-3UTR CAA 90 bp CTCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGATCTTGGGACACTTCTaGCACTTCAGCATCAAACTT +
Preference number: 3 (lower is better)
Translates to: LRLPLQRVYKPRLTGEAEILGHF*HFSIKL
Trigger: AAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGAT...CTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp GGAGGTACAGGGGATGAGGGACCTGGTGTGTGGCGCAGGAGGGGCTGGGACGTGAGTCCTCGCCGTGGATaGGGCGTACCAGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: GGTGDEGPGVWRRRGWDVSPRRG*GVPARS
Trigger: ACTTCGGGCTGGTACGCCTCATCCACGGCGAGGACT...CACGTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTCATCCCCTGTACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTGAGAAGGCCACGGGGGCAGCCATaGCCACGGCGCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PPSCHLQVPQHPTSDLRRPRGQP*PRRPGW
Trigger: CCATCCAGGGCGCCGTGGCCATGGCTGCCCCCGTGG...CCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CATCTCCACGTGAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCTCTCAGGCTCCACGGTaGGCGAGGTGGGCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HLHVNNGPGSMAHQAHVPSQAPR*ARWASL
Trigger: CAGGCTCGCCCACCTCGCCCACCGTGGAGCCTGAGA...GGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTCACGTGGAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGGGGTCTGGGCAGCTCTaGACTCGCTTGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: REAWPTRPMSPVSVPKALGSGQL*TRLSTT
Trigger: CGTGGTGGACAAGCGAGTCCAGAGCTGCCCAGACCC...CAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CATCTCCACGTGAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCTCCTGCTCTGCCGAGTaGAGCCCGTCATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: HLHVNNGPGSMAHQAHVPSCSAE*SPSSPP
Trigger: GGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGA...GGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTCACGTGGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCCCGGACACCAGGTCGTaGGAGAACAGCAGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: REHCRSSHTSCKARPPSCPDTRS*ENSRRC
Trigger: ACAGCGCCTGCTGTTCTCCCACGACCTGGTGTCCGG...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTTCCGAGTCCTCGCCGTaGATGAGGCGTACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFSESSP*MRRTSP
Trigger: CGGGCTGGTACGCCTCATCCACGGCGAGGACTCGGA...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCGGCTCTCCAGGATCTTaGTGGCCTCCTTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: REHCRSSHTSCKARPPSCGSPGS*WPPSAP
Trigger: GGGAGCTGAAGGAGGCCATCAAGATCCTGGAGAGCC...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCAGCCGCCTCATCATCTaGGTCCTGCTCTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: EGPGTLQEQPHFMQGTPTSRLII*VLLCRV
Trigger: CACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCT...GGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCCGGTGGTCCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCGGGCAGCGAGGTaGCCAGCAGAGCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGPGTAQVWSPLKADKTHRAAR*PAEPSP
Trigger: AGGAGATGGCTCTGCTGGCCACCTCGCTGCCCGATG...CGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGGACCACCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTGAGAAGGCTGTGTGGTCTCTGCTaGCTGAGGCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPSCHLQVPQHPTSDLRRLCGLC*LRQGPG
Trigger: CCCAGGGCCCTGCCTCAGCCAGCAGAGACCACACAG...CCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTCTGCCACCGCACTGCTaGCAGAGCACAGGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFLPPHC*QSTGVS
Trigger: TGAGACACCTGTGCTCTGTCAGCAGTGCGGTGGCAG...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCGTCTCCTTCACATGCTaGTTGACGCCCTCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: EGPGTLQEQPHFMQGTPTVSFTC*LTPSGY
Trigger: GTACCCGGAGGGCGTCAAGCAGCATGTGAAGGAGAC...GGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GGAGGTACAGGGGATGAGGGACCTGGTGTGTGGCGCAGGAGGGGCTGGGACGTGATGAAGGGCCAGATGTaGTGGAGGTCCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGTGDEGPGVWRRRGWDVMKGQM*WRSLLL
Trigger: CAACAGCAAGGACCTCCAGCACATCTGGCCCTTCAT...CACGTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTCATCCCCTGTACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CCCGGTGGTCCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGATCTGCGTCCTGCTCTaGCGAGTGCAGCCCGTCATC +
Preference number: 4 (lower is better)
Translates to: PGGPGTAQVWSPLKADKTICVLL*RVQPVI
Trigger: GATGACGGGCTGCACTCGGCAGAGCAGGACGCAGAT...CGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGGACCACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CATCTCCACGTGAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCCAGGCTTCTCCTCCTTaGGCTCTGTGTCGGGTACTG +
Preference number: 4 (lower is better)
Translates to: HLHVNNGPGSMAHQAHVPQASPP*ALCRVL
Trigger: CAGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTG...GGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTCACGTGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GGTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTTCTAACGCTGGGAGGTaGGGATGCATCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GECSQGSAAPVVLAQHRCSNAGR*GCIRGC
Trigger: ACAGCCCCTGATGCATCCGCACCTCCCAGCGTTAGA...ACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGATCACCGTGCCACACTaGCTGTCAGTTGAGCGCATG +
Preference number: 4 (lower is better)
Translates to: REAWPTRPMSPVSVPKALITVPH*LSVERM
Trigger: CATGCGCTCAACTGACAGCCAGTGTGGCACGGTGAT...CAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCCGGTGGTCCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGAGGGCTCATCCTCCTTaGGTAGAGCCCCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: PGGPGTAQVWSPLKADKTRAHPP*VEPHPP
Trigger: CGGAGGATGGGGCTCTACCCAAGGAGGATGAGCCCT...CGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGGACCACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGGCTCCCGGAAACTCTTaGGAGGCCCGTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGAPGNS*EARPSQ
Trigger: CTGGGAAGGACGGGCCTCCCAAGAGTTTCCGGGAGC...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGCTGCCTAGGTTTTCCTaGGTGATGATGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: REAWPTRPMSPVSVPKALLPRFS*VMMEGG
Trigger: CCCACCTTCCATCATCACTCAGGAAAACCTAGGCAG...CAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTGGTTCAGGCGGCCACTaGACTGGGAGAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFGSGGH*TGRGSK
Trigger: TTTGCTACCTCTCCCAGTGCAGTGGCCGCCTGAACC...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GGAGGTACAGGGGATGAGGGACCTGGTGTGTGGCGCAGGAGGGGCTGGGACGTGAACTGGGTCATGGACTaGACCACACGGATTAATGCC +
Preference number: 4 (lower is better)
Translates to: GGTGDEGPGVWRRRGWDVNWVMD*TTRINA
Trigger: GGCATTAATCCGTGTGGTGCAGTCCATGACCCAGTT...CACGTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTCATCCCCTGTACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCATTCCCAGGCAATCTTaGCCGGCTCTACCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: REHCRSSHTSCKARPPSCIPRQS*PALPWL
Trigger: CAGCCAAGGTAGAGCCGGCCAAGATTGCCTGGGAAT...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTCCACTCGGGCCACCTaGCCCACTGAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PGTAQVWSPLKADKTHHASTRAT*PTEGSS
Trigger: GGATGAGCCCTCAGTGGGCCAGGTGGCCCGAGTGGA...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCCCACGGCGCCCTGGATaGCAGCCGTGGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVPRRPG*QPWPPP
Trigger: AGGAGGCGGCCACGGCTGCCATCCAGGGCGCCGTGG...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCTTGTCGCTGGCCTGGTTTGTGCAGATGCTCCTGTCACCTCAGTGGGGATAAATCTGAGTCTGAGCCCTaGGACGCCTCCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PCRWPGLCRCSCHLSGDKSESEP*DASPGA
Trigger: GGCCCCTGGGGAGGCGTCCCAGGGCTCAGACTCAGA...TTTATCCCCACTGAGGTGACAGGAGCATCTGCACAAACCAGGCCAGCGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp GATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAGAACAGCAGGCGCTGTaGGCCTGCTTCGGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: DNRQVWAGLPLSLPSWTGEQQAL*ACFGAG
Trigger: TCCGGCCCCGAAGCAGGCTCACAGCGCCTGCTGTTC...TCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CCACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTGAGAAGGCAGGTACGGCCAACATaGTCCCCAGACTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PPSCHLQVPQHPTSDLRRQVRPT*SPDCTT
Trigger: TGTGGTGCAGTCTGGGGATCATGTTGGCCGTACCTG...CCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGCCTCCTCTTCTCCAATaGGCTCCACGTCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGPPLLQ*APRHPH
Trigger: GTGGGGATGACGTGGAGCTCATTGGAGAAGAGGAGG...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp AGAGGAGAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGGGTCACAACCTCCACTaGCACCCTGTCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGEGPGTLQEQPHFMQGTGHNLH*HPVSRL
Trigger: AAGCCTGGAGACAGGGTGGCAGTGGAGGTTGTGACC...CGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCGAGCCTGTGAGCAGCTaGTCCACAGTCATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: REHCRSSHTSCKARPPSCEPVSS*STVMFL
Trigger: CAAGAACATGACTGTGGAGCAGCTGCTCACAGGCTC...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTGAAGGGCCAGATGTGCTaGAGGTCCTTGCTGTTGACA +
Preference number: 4 (lower is better)
Translates to: VSVPKALLPRWSWHSTGVKGQMC*RSLLLT
Trigger: TGTCAACAGCAAGGACCTCCAGCACATCTGGCCCTT...CACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCGGGTCTTCCATGGAATaGTCCCTAGGACACTGGGTA +
Preference number: 4 (lower is better)
Translates to: REHCRSSHTSCKARPPSCGSSME*SLGHWV
Trigger: TACCCAGTGTCCTAGGGACCATTCCATGGAAGACCC...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTATAGACAGCAGGGTCTaGGCAGCTCTGGACTCGCTT +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFIDSRV*AALDSL
Trigger: AAGCGAGTCCAGAGCTGCCCAGACCCTGCTGTCTAT...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTCGGCACAGTCAATGTTaGCATCTATCACCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFRHSQC*HLSPCH
Trigger: GTGGCACGGTGATAGATGTCAACATTGACTGTGCCG...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp AGAGGAGAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCTTCCGCACTGTGCTaGAGAACTTCTTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RGEGPGTLQEQPHFMQGTPSALC*RTSWLP
Trigger: CGGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGG...CGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTTTGGTCTCCTTCACATaGTGCTTGACGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCLVSFT*CLTPSG
Trigger: CCCGGAGGGCGTCAAGCAGCATGTGAAGGAGACCAA...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CATCTCCACGTGAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCTTCAGTTCTACAACCTaGACCTCCTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: HLHVNNGPGSMAHQAHVPFSSTT*TSSTTT
Trigger: TGTGGTGGTGGAGGAGGTGCAGGTTGTAGAACTGAA...GGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTCACGTGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGAGAGCCACTGGACACTaGAGAAGATCTTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGRATGH*RRSWLG
Trigger: GCCCAGCCAAGATCTTCTCCAGTGTCCAGTGGCTCT...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp AGAGGAGAGGGACCGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCAGCTCCTCTATCTTaGGGTGCTCATCGTCCACGA +
Preference number: 4 (lower is better)
Translates to: RGEGPGTLQEQPHFMQGTPAPLS*GAHRPR
Trigger: TCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGG...CGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCGGTCCCTCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTGCACCAACTGGGTCATaGACTGCACCACACGGATTA +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFAPTGS*TAPHGL
Trigger: TAATCCGTGTGGTGCAGTCCATGACCCAGTTGGTGC...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GAGCAAGGCACCTGTAGCCATTTCTGTCCAGGCAGCACATTCTCAACTCCGTTCGCTGAGGCAGGGCCCTaGGCTCCACCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: EQGTCSHFCPGSTFSTPFAEAGP*APPSES
Trigger: AGACTCAGAGGGTGGAGCCCAGGGCCCTGCCTCAGC...GAACGGAGTTGAGAATGTGCTGCCTGGACAGAAATGGCTACAGGTGCCTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGCCACATCACATCAGCTaGGGTCATCGTGGTCACAAC +
Preference number: 4 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGPHHIS*GHRGHN
Trigger: GTTGTGACCACGATGACCTCAGCTGATGTGATGTGG...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTCGTTGGAGCGGATGTTaGATTCCACAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFRWSGC*IPQSHL
Trigger: AAGATGGCTCTGTGGAATGCAACATCCGCTCCAACG...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTCAGCTGAGGTCATCGTaGTCACAACCTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCQLRSS*SQPPLP
Trigger: TGGCAGTGGAGGTTGTGACCACGATGACCTCAGCTG...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTGTTCAGCTGCAGCCATaGGCTCCAGAGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGTAQVWSPLKADKTHHAVQLQP*APESCC
Trigger: ACAGCAGCTCTCTGGAGCCCATGGCTGCAGCTGAAC...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGGAGGAGAGGTCCCCAAGCTGCCGCTaGGCATGGTCAAAGCATCCG +
Preference number: 4 (lower is better)
Translates to: HLGTLLALQHQTCRREERSPSCR*AWSKHP
Trigger: CGGATGCTTTGACCATGCTCAGCGGCAGCTTGGGGA...CCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCTTTCTCCATCAGCCCTaGCACGGGGGCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVFLHQP*HGGSHG
Trigger: GCCATGGCTGCCCCCGTGGCAGGGCTGATGGAGAAA...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTGCTCTGTGTGGTCTCTaGTGGCTGAGGCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFALCGL*WLRQGP
Trigger: AGGGCCCTGCCTCAGCCAGCAGAGACCACACAGAGC...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTCACGTCATCCCCACTTaGTCGCAGCTTGAACCACTT +
Preference number: 4 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCHVIPT*SQLEPL
Trigger: AAGTGGTTCAAGCTGCGACCAAGTGGGGATGACGTG...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTTCTCCTCCTCAGCAATaGCCACATTGTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCSPPQQ*PHCPGS
Trigger: AGACCCTGGACAATGTGGCCATTGCTGAGGAGGAGA...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CTCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGCACTTGGTCGCAGCTTaGACCACTTCACCATGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLPLQRVYKPRLTGEAEHLVAA*TTSPCR
Trigger: CCTGCATGGTGAAGTGGTTCAAGCTGCGACCAAGTG...CTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp AGAACGCAGCATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGACCTGGGCCCTCTCCTaGATGGCATGGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTQHLGTLLALQHQTCRRTWALS*MAWVSS
Trigger: GCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGT...CCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATGCTGCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTAATAAGGACTTGGCCTaGGTAGAAGCCATAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QEGREQAAADLSHHDTPFNKDLA*VEAIRV
Trigger: GACTCTTATGGCTTCTACCCAGGCCAAGTCCTTATT...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGATGGAGATGAGCACCTaGAGAAGGCTAGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGMEMST*RRLDLL
Trigger: AAGCAAGTCTAGCCTTCTCCAGGTGCTCATCTCCAT...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAACCATTGGGCATCACCTaGGCCCTCTCCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLEPLGIT*ALSCMA
Trigger: TGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGG...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CAA 72 bp GCATCTTGGGACACTTCTTGCACTTCAGCATCAAACTaGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ASWDTSCTSASN*PQGGEGSRRLQ
Trigger: TTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTTCCGAGTGGGGCCCTTaGTCAGTGCAGAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFSEWGP*SVQRRG
Trigger: ACCTCTTCTCTGCACTGATCAAGGGCCCCACTCGGA...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCGCTTTCACTGGGGACTaGACCTCAGGCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVAFTGD*TSGFSS
Trigger: GGAGGAGAAGCCTGAGGTGCAGTCCCCAGTGAAAGC...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTCCTCCAGTTTCAGCTTaGTCTCCTTCACATGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGTAQVWSPLKADKTHHAPPVSA*SPSHAA
Trigger: AGCAGCATGTGAAGGAGACCAAGCTGAAACTGGAGG...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGGAGGAGAGGTGGCCGGCTCTACCTTaGCTGGGAAGACATACAGAC +
Preference number: 4 (lower is better)
Translates to: HLGTLLALQHQTCRREERWPALP*LGRHTD
Trigger: GTCTGTATGTCTTCCCAGCCAAGGTAGAGCCGGCCA...CCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGGAGGAGAGGCATTGTCATACAGGTTaGGGTTCAGGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HLGTLLALQHQTCRREERHCHTG*GSGGHC
Trigger: GCAGTGGCCGCCTGAACCCCAACCTGTATGACAATG...CCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GTAAGTTCAATAGGCCTAAGGGCTATAACGCACTGGCAGGCCAGAGCCAGCCACACCAGGATCAGACCTTaGATGGAGATGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VSSIGLRAITHWQARASHTRIRP*MEMSTW
Trigger: CCAGGTGCTCATCTCCATCCAAGGTCTGATCCTGGT...GTGGCTGGCTCTGGCCTGCCAGTGCGTTATAGCCCTTAGGCCTATTGAACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTGGTCGTCGCACCAACTaGGTCATGGACTGCACCACA +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFGRRTN*VMDCTT
Trigger: TGTGGTGCAGTCCATGACCCAGTTGGTGCGACGACC...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
3UTR CAA 72 bp GCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTaGGACTGGAAGAGCAAGGCACCTGTAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: AGLGRTAIITAI*DWKSKAPVAIS
Trigger: AGAAATGGCTACAGGTGCCTTGCTCTTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp GTAAGTTCAATAGGCCTAAGGGCTATAACGCACTGGCAGGCCAGAGCCAGCCACCTGGGGTGCAGGACATaGTTCTCACAACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSIGLRAITHWQARASHLGCRT*FSQLAS
Trigger: AGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAG...GTGGCTGGCTCTGGCCTGCCAGTGCGTTATAGCCCTTAGGCCTATTGAACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCCTCTGTGTCGGGTACTaGCTCCATCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVLCVGY*LHLLLL
Trigger: GAGGAGGAGAAGATGGAGGCAGTACCCGACACAGAG...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp AGAACGCAGCATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGCCACCCACACTGAAGTaGTGCCGAATCTCCTGTTCG +
Preference number: 4 (lower is better)
Translates to: RTQHLGTLLALQHQTCRRPPTLK*CRISCS
Trigger: CGAACAGGAGATTCGGCAGCACTTCAGTGTGGGTGG...CCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATGCTGCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAGGAGAAGATCTTGGCTaGGCCAATAAGGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: DNRQVWAGLPLSLPSWTGGEDLG*ANKDLA
Trigger: GGCCAAGTCCTTATTGGCCCAGCCAAGATCTTCTCC...TCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GAGCAAGGCACCTGTAGCCATTTCTGTCCAGGCAGCACATTCTCAACTCCGTTCACCCCAGAGAGCCACTaGACACTGGAGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: EQGTCSHFCPGSTFSTPFTPESH*TLEKIL
Trigger: CAAGATCTTCTCCAGTGTCCAGTGGCTCTCTGGGGT...GAACGGAGTTGAGAATGTGCTGCCTGGACAGAAATGGCTACAGGTGCCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAACTTCTTCTCTCGGGTTaGCTTCTCAGGCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLELLLSG*LLRLHG
Trigger: ACCGTGGAGCCTGAGAAGCCAACCCGAGAGAAGAAG...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATGGGCCCTCTCCTGCATaGCATGGGTTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYGPSPA*HGFPAR
Trigger: CCTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCC...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTGAAACCCTTGGAGAGTaGGAAGAGGGGGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFETLGE*EEGEAD
Trigger: ATCGGCTTCCCCCTCTTCCCACTCTCCAAGGGTTTC...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGGAGGAGAGGTGTCCAGGGTCTTCTTaGGGTTCTCCTGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLGTLLALQHQTCRREERCPGSS*GSPVAS
Trigger: AGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACA...CCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATTCATCATCTGCGTCCTaGTCTGCCGAGTGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYSSSAS*SAECSP
Trigger: CGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGA...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTTCTTTTTACGACCAGTaGCACTGCCACTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFSFYDQ*HCHSGR
Trigger: CCTCCCAGAGTGGCAGTGGCACTGGTCGTAAAAAGA...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCGGGGCCCTTGATCAGTaGAGAGAAGAGGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVGALDQ*REEVHS
Trigger: AGAATGGACCTCTTCTCTGCACTGATCAAGGGCCCC...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCTTTCACTCCCGGCTCTaGCTTCCCCTTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVFHSRL*LPLSCL
Trigger: CAGACAAGAAAGGGGAAGCCAGAGCCGGGAGTGAAA...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGTTGGCTTCCGGGGGCTaGAACTCAATCTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LRLPLQRVYKPRLTGEAELASGG*NSIFLK
Trigger: TTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAA...CTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp AGGCATCCTCTCTACCTGGAGCTTCACATTATCAAAAGCTTAGAAACTTGTAAAGGCCACCTGGCCCACTaGGGGCTCATCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RHPLYLELHIIKSLETCKGHLAH*GLILLG
Trigger: CCCAAGGAGGATGAGCCCTCAGTGGGCCAGGTGGCC...TTTACAAGTTTCTAAGCTTTTGATAATGTGAAGCTCCAGGTAGAGAGGATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATTCTCAGGCAGGAAGCTaGGGTAGCTCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYSQAGS*GSSSSS
Trigger: GGAGGAGGAAGAGCTACCGCAGCTTCCTGCCTGAGA...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCCAGGGAAAAGGTCGTTaGAGCGGATGTTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVQGKGR*SGCCIP
Trigger: TGGAATGCAACATCCGCTCCAACGACCTTTTCCCTG...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTTCATTGTTGTCCAGGTaGTGCACAGGGAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFSLLSR*CTGKRS
Trigger: CGACCTTTTCCCTGTGCACCACCTGGACAACAATGA...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATAACGCACTGGCATCCTCTATCTTGGGGTaGTCATCGTCCACGAGCCCG +
Preference number: 4 (lower is better)
Translates to: YPLLESKFNRPKGYNALASSILG*SSSTSP
Trigger: CGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGA...TGCCAGTGCGTTATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp TATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATAACGCACTGGCAGGGGCTGTCTCAGTCTaGTCTGTGTGGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YPLLESKFNRPKGYNALAGAVSV*SVWSLL
Trigger: CAGCAGAGACCACACAGAGCAGACTGAGACAGCCCC...TGCCAGTGCGTTATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGAGCTTCATTGTAGTATaGTTCATTCACCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: LRLPLQRVYKPRLTGEAESFIVV*FIHQDQ
Trigger: CTGATCCTGGTGAATGAACCATACTACAATGAAGCT...CTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp CATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGGAGGAGAGGTCTCCTGTAGCTTCTTaGTATCGTCCAAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: HLGTLLALQHQTCRREERSPVAS*YRPKTS
Trigger: AGAAGTTTTTGGACGATATCAAGAAGCTACAGGAGA...CCTCTCCTCCCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp GCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTTTGGCTTTTATCTTCTTGAAAGAGTaGTTTGAGGGTGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: AQVWSPLKADKTHHALAFIFLKE*FEGANS
Trigger: GGAGTTTGCACCCTCAAACCACTCTTTCAAGAAGAT...AAAAGCCAAAGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCAGGTGGGCGAGCCTGTaGGCAGCTGCTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLRWASL*AAAPQS
Trigger: TGACTGTGGAGCAGCTGCTCACAGGCTCGCCCACCT...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR GCA 90 bp AGAACGCAGCATCTTGGGACACTTCTTGCACTTCAGCATCAAACTTGCCGCAGGATGATTCTCACAACTTaGTTCTTCAACAGACGCTTC +
Preference number: 4 (lower is better)
Translates to: RTQHLGTLLALQHQTCRRMILTT*FFNRRF
Trigger: GAAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCAT...CCTGCGGCAAGTTTGATGCTGAAGTGCAAGAAGTGTCCCAAGATGCTGCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp CTCCTGGTGTCCTATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATTTCCCCTTTCTTGTCTaGGTCTTCCATGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LLVSYPLLESKFNRPKGYFPFLV*VFHGMV
Trigger: GACCATTCCATGGAAGACCCAGACAAGAAAGGGGAA...ATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATAGGACACCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCCCTTCACATGCTGCTTaGCGCCCTCCGGGTACCACT +
Preference number: 4 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLPSHAA*RPPGTT
Trigger: AGTGGTACCCGGAGGGCGTCAAGCAGCATGTGAAGG...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCAGTGATGATGGAAGGTaGGGGGCTAACGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLSDDGR*GANAVR
Trigger: ACGGACAGCGTTAGCCCCCCACCTTCCATCATCACT...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp AGGCATCCTCTCTACCTGGAGCTTCACATTATCAAAAGCTTAGAAACTTGTAAAGGAACTCAATCTTCTTaGAAGAGTGGTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RHPLYLELHIIKSLETCKGTQSS*KSGLRV
Trigger: CACCCTCAAACCACTCTTTCAAGAAGATTGAGTTCC...TTTACAAGTTTCTAAGCTTTTGATAATGTGAAGCTCCAGGTAGAGAGGATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR TCA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCTGTTACCAATGCGGATaGCAATGTCAGTTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLCYQCG*QCQLCG
Trigger: TCCGCACAACTGACATTGTCATCCGCATTGGTAACA...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TTCTCCATCAGCCCTGCCACGGGGGCAGCCATGGCCACGGCGCCCTaGATGGCAGCCGTGGCCGCCTCCTCACTGATGACCACGCCCTTG +
Preference number: 5 (lower is better)
Translates to: FSISPATGAAMATAP*MAAVAASSLMTTPL
Trigger: CAAGGGCGTGGTCATCAGTGAGGAGGCGGCCACGGCTGCCATCCAGGGCGCCGTGGCCATGGCTGCCCCCGTGGCAGGGCTGATGGAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GAAACTCTTGGGAGGCCCGTCCTTCCCAGCTTTCTCCATCAGCCCTaGCACGGGGGCAGCCATGGCCACGGCGCCCTGGATGGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: ETLGRPVLPSFLHQP*HGGSHGHGALDGSR
Trigger: ACGGCTGCCATCCAGGGCGCCGTGGCCATGGCTGCCCCCGTGGCAGGGCTGATGGAGAAAGCTGGGAAGGACGGGCCTCCCAAGAGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp CGCCCTTGTCCTCCTCGGGGGCAGTGGGCTGCTCGGCAGGCAAGATaGCGGCCAGCTCCTCTATCTTGGGGTGCTCATCGTCCACGAGCC +
Preference number: 5 (lower is better)
Translates to: RPCPPRGQWAARQAR*RPAPLSWGAHRPRA
Trigger: GGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCCCACTGCCCCCGAGGAGGACAAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CCCTTGGCGCTGGTGAAGGTGACGCCAGGCCTGCCACCGCACTGCTaGCAGAGCACAGGTGTCTCACTGGGCCACTCGGCTTTCACTGGG +
Preference number: 5 (lower is better)
Translates to: PLALVKVTPGLPPHC*QSTGVSLGHSAFTG
Trigger: CCCAGTGAAAGCCGAGTGGCCCAGTGAGACACCTGTGCTCTGTCAGCAGTGCGGTGGCAGGCCTGGCGTCACCTTCACCAGCGCCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GGCTGCTCGGCAGGCAAGATGGCGGCCAGCTCCTCTATCTTGGGGTaGTCATCGTCCACGAGCCCGTTGTCGGTCTCCCAGCTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: GCSAGKMAASSSILG*SSSTSPLSVSQLSL
Trigger: CAGCGACAGCTGGGAGACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp CTGGGAGGTGCGGATGCATCAGGGGCTGTCTCAGTCTGCTCTGTGTaGTCTCTGCTGGCTGAGGCAGGGCCCTGGGCTCCACCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LGGADASGAVSVCSV*SLLAEAGPWAPPSE
Trigger: CTCAGAGGGTGGAGCCCAGGGCCCTGCCTCAGCCAGCAGAGACCACACAGAGCAGACTGAGACAGCCCCTGATGCATCCGCACCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CAGAGCGGTCCTCCAGTTTCAGCTTGGTCTCCTTCACATGCTGCTTaGCGCCCTCCGGGTACCACTGGACGCGCACGTAGCCGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: QSGPPVSAWSPSHAA*RPPGTTGRARSRAA
Trigger: TGCGGCGCGGCTACGTGCGCGTCCAGTGGTACCCGGAGGGCGTCAAGCAGCATGTGAAGGAGACCAAGCTGAAACTGGAGGACCGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GTGCGGATGCATCAGGGGCTGTCTCAGTCTGCTCTGTGTGGTCTCTaGTGGCTGAGGCAGGGCCCTGGGCTCCACCCTCTGAGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: VRMHQGLSQSALCGL*WLRQGPGLHPLSLS
Trigger: GCTCAGACTCAGAGGGTGGAGCCCAGGGCCCTGCCTCAGCCAGCAGAGACCACACAGAGCAGACTGAGACAGCCCCTGATGCATCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp CAGTGGGCTGCTCGGCAGGCAAGATGGCGGCCAGCTCCTCTATCTTaGGGTGCTCATCGTCCACGAGCCCGTTGTCGGTCTCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: QWAARQARWRPAPLS*GAHRPRARCRSPSC
Trigger: ACAGCTGGGAGACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GACCCCTCATCCTGCATCTCCACGGGGCTGGCTGATCCATCAGGTTaGTCCTCCGGGCTAGCAGACCCTATTTCACTCCCGGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: DPSSCISTGLADPSG*SSGLADPISLPALA
Trigger: AGCCAGAGCCGGGAGTGAAATAGGGTCTGCTAGCCCGGAGGAGCAACCTGATGGATCAGCCAGCCCCGTGGAGATGCAGGATGAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp CAGAGCACAGGTGTCTCACTGGGCCACTCGGCTTTCACTGGGGACTaGACCTCAGGCTTCTCCTCCTTGCGCTCTGTGTCGGGTACTGCC +
Preference number: 5 (lower is better)
Translates to: QSTGVSLGHSAFTGD*TSGFSSLRSVSGTA
Trigger: GGCAGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTGAGGTGCAGTCCCCAGTGAAAGCCGAGTGGCCCAGTGAGACACCTGTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GGAGGTACAGGGGATGAGGGACCTGGTGTGTGGCGCAGGAGGGGCTGGGACGTGTCGTTGGAGCGGATGTaGCATTCCACAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: GGTGDEGPGVWRRRGWDVSLERM*HSTEPS
Trigger: AGATGGCTCTGTGGAATGCAACATCCGCTCCAACGA...CACGTCCCAGCCCCTCCTGCGCCACACACCAGGTCCCTCATCCCCTGTACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGGAGAAGACCTCGCCCTaGGCGCTGGTGAAGGTGACG +
Preference number: 5 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGEKTSP*ALVKVT
Trigger: CGTCACCTTCACCAGCGCCAAGGGCGAGGTCTTCTC...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCGTGCTGAAGAACTTCTaGGCTTCCGGGGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: REHCRSSHTSCKARPPSCVLKNF*ASGGWN
Trigger: GTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCAC...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp TTCTCAGGCTCCACGGTGGGCGAGGTGGGCGAGCCTGTGAGCAGCTaGTCCACAGTCATGTTCTTGAGGCTCTCCAGGATCTTGATGGCC +
Preference number: 5 (lower is better)
Translates to: FSGSTVGEVGEPVSS*STVMFLRLSRILMA
Trigger: GGCCATCAAGATCCTGGAGAGCCTCAAGAACATGACTGTGGAGCAGCTGCTCACAGGCTCGCCCACCTCGCCCACCGTGGAGCCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TTAAGGGCCCCATTGGGCATCACCTGGGCCCTCTCCTGCATGGCATaGGTTTCCAGCCAGGACTCAATTCGGTTCACCAGCCGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LRAPLGITWALSCMA*VSSQDSIRFTSRQP
Trigger: TGGCTGGCGGCTGGTGAACCGAATTGAGTCCTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCACCCTGTCTCCAGGCTaGAAGTCACGGGTGACCTTA +
Preference number: 5 (lower is better)
Translates to: REHCRSSHTSCKARPPSCTLSPG*KSRVTL
Trigger: TAAGGTCACCCGTGACTTCAAGCCTGGAGACAGGGT...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGGCCAGCTCCTCTATCTaGGGGTGCTCATCGTCCACG +
Preference number: 5 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGASSSI*GCSSST
Trigger: CGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGC...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTAGCTCCCGGAAACTCTaGGGAGGCCCGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCSSRKL*GGPSFP
Trigger: TGGGAAGGACGGGCCTCCCAAGAGTTTCCGGGAGCT...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CGGGAAGCATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGTGGAGAAGGCTAGACTaGCTTGTCCACCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: REAWPTRPMSPVSVPKALWRRLD*LVHLSV
Trigger: GACAGAGAGGTGGACAAGCAAGTCTAGCCTTCTCCA...CAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCATGCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CTGAAGCTCCTCCGACCCCTCATCCTGCATCTCCACGGGGCTGGCTaGTCCATCAGGTTGCTCCTCCGGGCTAGCAGACCCTATTTCACT +
Preference number: 5 (lower is better)
Translates to: LKLLRPLILHLHGAG*SIRLLLRASRPYFT
Trigger: AGTGAAATAGGGTCTGCTAGCCCGGAGGAGCAACCTGATGGATCAGCCAGCCCCGTGGAGATGCAGGATGAGGGGTCGGAGGAGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CCAGCCAGGACTCAATTCGGTTCACCAGCCGCCAGCCACCCACACTaGAGTGCTGCCGAATCTCCTGTTCGAAGACCTCAGGAGGTCGTC +
Preference number: 5 (lower is better)
Translates to: PARTQFGSPAASHPH*SAAESPVRRPQEVV
Trigger: GACGACCTCCTGAGGTCTTCGAACAGGAGATTCGGCAGCACTTCAGTGTGGGTGGCTGGCGGCTGGTGAACCGAATTGAGTCCTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CCCAGGGGCCATCCCAACATCTTCAGGCTCTTCACGGCCGGAGTCTaGGAGTTCAGCTGCAGCCATGGGCTCCAGAGAGCTGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: PRGHPNIFRLFTAGV*EFSCSHGLQRAAVF
Trigger: AAAGACAGCAGCTCTCTGGAGCCCATGGCTGCAGCTGAACTCTCAGACTCCGGCCGTGAAGAGCCTGAAGATGTTGGGATGGCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GGTGTCATCTGTATCGTCAGCCGCCTCATCATCTGCGTCCTGCTCTaGCGAGTGCAGCCCGTCATCTCCACCCTCCTTCAAGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GVICIVSRLIICVLL*RVQPVISTLLQEEG
Trigger: CCCTTCCTCTTGAAGGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACAGATGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GAGCTGGTGTCATCTGTATCGTCAGCCGCCTCATCATCTGCGTCCTaGTCTGCCGAGTGCAGCCCGTCATCTCCACCCTCCTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: ELVSSVSSAASSSAS*SAECSPSSPPSFKR
Trigger: CCTCTTGAAGGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACAGATGACACCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GGTCACAGAGCTGGTGTCATCTGTATCGTCAGCCGCCTCATCATCTaGGTCCTGCTCTGCCGAGTGCAGCCCGTCATCTCCACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GHRAGVICIVSRLII*VLLCRVQPVISTLL
Trigger: AAGGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACAGATGACACCAGCTCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp TGTCGCTGTCGTCCTCCCACTCATCCGAGGAGGCCCCACTGGAGCTaGCTTCCACGGAGTCGTAGTCAGACTCCTCAATCTCAGACTCGA +
Preference number: 5 (lower is better)
Translates to: CRCRPPTHPRRPHWS*LPRSRSQTPQSQTR
Trigger: TCGAGTCTGAGATTGAGGAGTCTGACTACGACTCCGTGGAAGGCAGCTCCAGTGGGGCCTCCTCGGATGAGTGGGAGGACGACAGCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GCCACTCGGCTTTCACTGGGGACTGCACCTCAGGCTTCTCCTCCTTaGGCTCTGTGTCGGGTACTGCCTCCATCTTCTCCTCCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: ATRLSLGTAPQASPP*ALCRVLPPSSPPQQ
Trigger: TTGCTGAGGAGGAGAAGATGGAGGCAGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTGAGGTGCAGTCCCCAGTGAAAGCCGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp CAGGACTCAATTCGGTTCACCAGCCGCCAGCCACCCACACTGAAGTaGTGCCGAATCTCCTGTTCGAAGACCTCAGGAGGTCGTCGCACC +
Preference number: 5 (lower is better)
Translates to: QDSIRFTSRQPPTLK*CRISCSKTSGGRRT
Trigger: GGTGCGACGACCTCCTGAGGTCTTCGAACAGGAGATTCGGCAGCACTTCAGTGTGGGTGGCTGGCGGCTGGTGAACCGAATTGAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCTGGGCCAATAAGGACTaGGCCTGGGTAGAAGCCATA +
Preference number: 5 (lower is better)
Translates to: REHCRSSHTSCKARPPSCWANKD*AWVEAI
Trigger: TATGGCTTCTACCCAGGCCAAGTCCTTATTGGCCCA...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CTTGCCGCAGGGAGGAGAGGGCAGCAGAAGGCTCCAATTAGGTACAGGAAGGGGCCATTGTCATACAGGTaGGGGTTCAGGCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LAAGRRGQQKAPIRYRKGPLSYR*GFRRPL
Trigger: CAGTGGCCGCCTGAACCCCAACCTGTATGACAATGG...CCCCTTCCTGTACCTAATTGGAGCCTTCTGCTGCCCTCTCCTCCCTGCGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp ATGGCCCACCAGGCCCATGTCCCCGGTGAGTGTTCCCAAGGCTCTGCTGCCCCGACACACACTTTCCCATaGTCATACAGGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: MAHQAHVPGECSQGSAAPTHTFP*SYRLGF
Trigger: GAACCCCAACCTGTATGACAATGGGAAAGTGTGTGT...CGGGGCAGCAGAGCCTTGGGAACACTCACCGGGGACATGGGCCTGGTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp CTGCTGTCTTTAAGGGCCCCATTGGGCATCACCTGGGCCCTCTCCTaGATGGCATGGGTTTCCAGCCAGGACTCAATTCGGTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: LLSLRAPLGITWALS*MAWVSSQDSIRFTS
Trigger: GCTGGTGAACCGAATTGAGTCCTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAAAGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GTAGCTCTTCCTCCTCCTCTTTGGTCTAACGCTGGGAGGTGCGGATaGATCAGGGGCTGTCTCAGTCTGCTCTGTGTGGTCTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VALPPPLWSNAGRCG*IRGCLSLLCVVSAG
Trigger: GCCAGCAGAGACCACACAGAGCAGACTGAGACAGCCCCTGATGCATCCGCACCTCCCAGCGTTAGACCAAAGAGGAGGAGGAAGAGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp GGCTCCAGAGAGCTGCTGTCTTTAAGGGCCCCATTGGGCATCACCTaGGCCCTCTCCTGCATGGCATGGGTTTCCAGCCAGGACTCAATT +
Preference number: 5 (lower is better)
Translates to: GSRELLSLRAPLGIT*ALSCMAWVSSQDSI
Trigger: AATTGAGTCCTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAAAGACAGCAGCTCTCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp GCTCTTCTCAGGCAGGAAGCTGCGGTAGCTCTTCCTCCTCCTCTTTaGTCTAACGCTGGGAGGTGCGGATGCATCAGGGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: ALLRQEAAVALPPPL*SNAGRCGCIRGCLS
Trigger: ACTGAGACAGCCCCTGATGCATCCGCACCTCCCAGCGTTAGACCAAAGAGGAGGAGGAAGAGCTACCGCAGCTTCCTGCCTGAGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTGACGGCACAGTCAATGTaGACATCTATCACCGTGCCA +
Preference number: 5 (lower is better)
Translates to: VSVPKALLPRWSWHSTGVTAQSM*TSITVP
Trigger: TGGCACGGTGATAGATGTCAACATTGACTGTGCCGT...CACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTACCACCACACGGAACTaGCTCTTGGTGCTGAGTACA +
Preference number: 5 (lower is better)
Translates to: QEGREQAAADLSHHDTPFTTTRN*LLVLST
Trigger: TGTACTCAGCACCAAGAGCAAGTTCCGTGTGGTGGT...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCCGGTGGTCCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGACAGGGAAAAGGTCGTaGGAGCGGATGTTGCATTCC +
Preference number: 5 (lower is better)
Translates to: PGGPGTAQVWSPLKADKTTGKRS*ERMLHS
Trigger: GGAATGCAACATCCGCTCCAACGACCTTTTCCCTGT...CGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGGACCACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGATCGTCCACGAGCCCGTaGTCGGTCTCCCAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: DNRQVWAGLPLSLPSWTGSSTSP*SVSQLS
Trigger: CGACAGCTGGGAGACCGACAACGGGCTCGTGGACGA...TCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGGCAGCACATTCTCAACTCCGTTCACGTGAGGGCTGCAGCCTCTCCTGGTGTAGGCTCTCCAGGATCTaGATGGCCTCCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QAAHSQLRSREGCSLSWCRLSRI*MASFSS
Trigger: GGAGCTGAAGGAGGCCATCAAGATCCTGGAGAGCCT...ACACCAGGAGAGGCTGCAGCCCTCACGTGAACGGAGTTGAGAATGTGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTCTGTCCTCAAAAGTCTaGACCATGATGCCATCGGGC +
Preference number: 5 (lower is better)
Translates to: QEGREQAAADLSHHDTPFLSSKV*TMMPSG
Trigger: GCCCGATGGCATCATGGTCAAGACTTTTGAGGACAG...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTGGGCAGAACTCATTGTaGTCCAGGTGGTGCACAGGG +
Preference number: 5 (lower is better)
Translates to: PGTAQVWSPLKADKTHHAGQNSL*SRWCTG
Trigger: CCCTGTGCACCACCTGGACAACAATGAGTTCTGCCC...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GGTGAGTGTTCCCAAGGCTCTGCTGCCCCGGTGGTCCTGGCACAGCACAGGTGTATCTCAGACTCGATGTaGTATAAGTGCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GECSQGSAAPVVLAQHRCISDSM*YKCCGR
Trigger: CCTGCCACAGCACTTATACAACATCGAGTCTGAGAT...ACACCTGTGCTGTGCCAGGACCACCGGGGCAGCAGAGCCTTGGGAACACTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGGAAGGGAGGGAGCAGGCAGCGGCTGACCTCTCCCACCATGACACTCCCTTTTCCACAGTCATGTTCTaGAGGCTCTCCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: QEGREQAAADLSHHDTPFSTVMF*RLSRIL
Trigger: CAAGATCCTGGAGAGCCTCAAGAACATGACTGTGGA...AAAGGGAGTGTCATGGTGGGAGAGGTCAGCCGCTGCCTGCTCCCTCCCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTACTTCTTCTCTCGGGTaGGCTTCTCAGGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: PGTAQVWSPLKADKTHHATSSLG*ASQAPR
Trigger: CCGTGGAGCCTGAGAAGCCAACCCGAGAGAAGAAGT...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp ACCTTGGCTGGGAAGACATACAGACAGCGTTCCCCAAGCTGCCGCTaGGCATGGTCAAAGCATCCGAGACGCTTCACCCTGCCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: TLAGKTYRQRSPSCR*AWSKHPRRFTLPRF
Trigger: AAACCTAGGCAGGGTGAAGCGTCTCGGATGCTTTGACCATGCTCAGCGGCAGCTTGGGGAACGCTGTCTGTATGTCTTCCCAGCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp GCGGATGTTGCATTCCACAGAGCCATCTTGCCACATCACATCAGCTaGGGTCATCGTGGTCACAACCTCCACTGCCACCCTGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ADVAFHRAILPHHIS*GHRGHNLHCHPVSR
Trigger: CCTGGAGACAGGGTGGCAGTGGAGGTTGTGACCACGATGACCTCAGCTGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp AGCTTGACGGCACAGTCAATGTTGACATCTATCACCGTGCCACACTaGCTGTCAGTTGAGCGCATGTGTCGAACCACATCCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: SLTAQSMLTSITVPH*LSVERMCRTTSRGT
Trigger: GGTGCCCCGGGATGTGGTTCGACACATGCGCTCAACTGACAGCCAGTGTGGCACGGTGATAGATGTCAACATTGACTGTGCCGTCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp CTCCCGGCTCTGGCTTCCCCTTTCTTGTCTGGGTCTTCCATGGAATaGTCCCTAGGACACTGGGTATCTGGGGTGCAGGACATGATTCTC +
Preference number: 5 (lower is better)
Translates to: LPALASPFLSGSSME*SLGHWVSGVQDMIL
Trigger: GAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGACCCAGACAAGAAAGGGGAAGCCAGAGCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp GCTCACGTCCTCCTCTTCTCCAATGAGCTCCACGTCATCCCCACTTaGTCGCAGCTTGAACCACTTCACCATGCAGGTACGGCCAACATG +
Preference number: 5 (lower is better)
Translates to: AHVLLFSNELHVIPT*SQLEPLHHAGTANM
Trigger: CATGTTGGCCGTACCTGCATGGTGAAGTGGTTCAAGCTGCGACCAAGTGGGGATGACGTGGAGCTCATTGGAGAAGAGGAGGACGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GAGCAAGGCACCTGTAGCCATTTCTGTCCAGGCAGCACATTCTCAACTCCGTTCAGACGCTTCACCTTCTaGGCCATAGAGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EQGTCSHFCPGSTFSTPFRRFTF*AIEPSP
Trigger: GGGGGAGGGCTCTATGGCCAAGAAGGTGAAGCGTCT...GAACGGAGTTGAGAATGTGCTGCCTGGACAGAAATGGCTACAGGTGCCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTCCAGGGCAGAACTCATaGTTGTCCAGGTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: PGTAQVWSPLKADKTHHAPGQNS*LSRWCT
Trigger: TGTGCACCACCTGGACAACAATGAGTTCTGCCCTGG...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TTTTTCTGGACATTCCCAGGCAATCTTGGCCGGCTCTACCTTGGCTaGGAAGACATACAGACAGCGTTCCCCAAGCTGCCGCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: FFWTFPGNLGRLYLG*EDIQTAFPKLPLSM
Trigger: CATGCTCAGCGGCAGCTTGGGGAACGCTGTCTGTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAAGATTGCCTGGGAATGTCCAGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TCTCCTGTTCGAAGACCTCAGGAGGTCGTCGCACCAACTGGGTCATaGACTGCACCACACGGATTAATGCCATCTCGTTGTAGCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SPVRRPQEVVAPTGS*TAPHGLMPSRCSSD
Trigger: GTCGCTGCTACAACGAGATGGCATTAATCCGTGTGGTGCAGTCCATGACCCAGTTGGTGCGACGACCTCCTGAGGTCTTCGAACAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGCCACCGGATGGGAGAACACGGAACTTGCTCTaGGTGCTGAGTACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: QRVYKPRLTGEAEPPDGRTRNLL*VLSTGL
Trigger: CAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGT...TCTCCCATCCGGTGGCTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCTGGCACAGCACAGGTGTGGAGCCCACTTAAGGCTGACAAGACGCATCATGCTCTGGCTTCCCCTTTCTaGTCTGGGTCTTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: PGTAQVWSPLKADKTHHALASPF*SGSSME
Trigger: TTCCATGGAAGACCCAGACAAGAAAGGGGAAGCCAG...AGCATGATGCGTCTTGTCAGCCTTAAGTGGGCTCCACACCTGTGCTGTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp GAGCAAGGCACCTGTAGCCATTTCTGTCCAGGCAGCACATTCTCAACTCCGTTCTCAGGCTTCTCCTCCTaGCGCTCTGTGTCGGGTACT +
Preference number: 5 (lower is better)
Translates to: EQGTCSHFCPGSTFSTPFSGFSS*RSVSGT
Trigger: AGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTGA...GAACGGAGTTGAGAATGTGCTGCCTGGACAGAAATGGCTACAGGTGCCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CATCTCCACGTGAACAATGGCCCGGGAAGCATGGCCCACCAGGCCCATGTCCCCTGGAACTCAATCTTCTaGAAAGAGTGGTTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: HLHVNNGPGSMAHQAHVPWNSIF*KEWFEG
Trigger: ACCCTCAAACCACTCTTTCAAGAAGATTGAGTTCCA...GGGGACATGGGCCTGGTGGGCCATGCTTCCCGGGCCATTGTTCACGTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CATCCTCCTTGGGTAGAGCCCCATCCTCCGTGTTACCAATGCGGATaGCAATGTCAGTTGTGCGGAAGCGAAAGTCAGGGTGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: HPPWVEPHPPCYQCG*QCQLCGSESQGGQQ
Trigger: TTGCTGACCACCCTGACTTTCGCTTCCGCACAACTGACATTGTCATCCGCATTGGTAACACGGAGGATGGGGCTCTACCCAAGGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp TTGTCCACCTCTCTGTCCCCTTTCCAATCCAGGTACCTAGGAGGCTaGCACACACTTTCCCATTGTCATACAGGTTGGGGTTCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSTSLSPFQSRYLGG*HTLSHCHTGWGSGG
Trigger: GCCGCCTGAACCCCAACCTGTATGACAATGGGAAAGTGTGTGTCAGCCTCCTAGGTACCTGGATTGGAAAGGGGACAGAGAGGTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TTGTCCACCACGAAGTCCCCAGGGCAGAACTCATTGTTGTCCAGGTaGTGCACAGGGAAAAGGTCGTTGGAGCGGATGTTGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: LSTTKSPGQNSLLSR*CTGKRSLERMLHST
Trigger: TGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAATGAGTTCTGCCCTGGGGACTTCGTGGTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAACATTCCCAGGCAATCTaGGCCGGCTCTACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLEHSQAI*AGSTLA
Trigger: AGCCAAGGTAGAGCCGGCCAAGATTGCCTGGGAATG...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CGGGAACACTGCAGGAGCAGCCACACTTCATGCAAGGCACGCCCACCCTCCTGCTTCTCCTGTAGCTTCTaGATATCGTCCAAAAACTTC +
Preference number: 5 (lower is better)
Translates to: REHCRSSHTSCKARPPSCFSCSF*ISSKNF
Trigger: GAAGTTTTTGGACGATATCAAGAAGCTACAGGAGAA...GCAGGAGGGTGGGCGTGCCTTGCATGAAGTGTGGCTGCTCCTGCAGTGTTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CTCAGACTGCCCTTGCAGAGAGTCTATAAGCCAAGGCTGACTGGAGAGGCTGAGTCAGCAATGGCCACATaGTCCAGGGTCTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LRLPLQRVYKPRLTGEAESAMAT*SRVFLR
Trigger: CCTCAAGAAGACCCTGGACAATGTGGCCATTGCTGA...CTCAGCCTCTCCAGTCAGCCTTGGCTTATAGACTCTCTGCAAGGGCAGTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp GGGAAAAGGTCGTTGGAGCGGATGTTGCATTCCACAGAGCCATCTTaGCACATCACATCAGCTGAGGTCATCGTGGTCACAACCTCCACT +
Preference number: 5 (lower is better)
Translates to: GKRSLERMLHSTEPS*HITSAEVIVVTTST
Trigger: AGTGGAGGTTGTGACCACGATGACCTCAGCTGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp TGTTGTCCAGGTGGTGCACAGGGAAAAGGTCGTTGGAGCGGATGTTaGATTCCACAGAGCCATCTTGCCACATCACATCAGCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: CCPGGAQGKGRWSGC*IPQSHLATSHQLRS
Trigger: TGACCTCAGCTGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTGAGAAGGCATGATTCTCACAACTaGCTTCTTCAACAGACGCTT +
Preference number: 5 (lower is better)
Translates to: PPSCHLQVPQHPTSDLRRHDSHN*LLQQTL
Trigger: AAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCATG...CCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp CCACCCTCCTGCCATCTGCAGGTTCCTCAACACCCCACCTCTGACCTGAGAAGGTTTCGCTTCAAGTTTTaGATGGACAAGGGAATGCTC +
Preference number: 5 (lower is better)
Translates to: PPSCHLQVPQHPTSDLRRFRFKF*MDKGML
Trigger: GAGCATTCCCTTGTCCATCAAAAACTTGAAGCGAAA...CCTTCTCAGGTCAGAGGTGGGGTGTTGAGGAACCTGCAGATGGCAGGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAACCACTTGGTCGCAGCTaGAACCACTTCACCATGCAG +
Preference number: 5 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLEPLGRS*NHFTMQ
Trigger: CTGCATGGTGAAGTGGTTCAAGCTGCGACCAAGTGG...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAACTCTTGATGAAACCCTaGGAGAGTGGGAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLELLMKP*ESGKRG
Trigger: CCCCCTCTTCCCACTCTCCAAGGGTTTCATCAAGAG...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 90 bp CTAGGACACTGGGTATCTGGGGTGCAGGACATGATTCTCACAACTTaGTTCTTCAACAGACGCTTCACCTTCTTGGCCATAGAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LGHWVSGVQDMILTT*FFNRRFTFLAIEPS
Trigger: GGAGGGCTCTATGGCCAAGAAGGTGAAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp GGCAGAACTCATTGTTGTCCAGGTGGTGCACAGGGAAAAGGTCGTTaGAGCGGATGTTGCATTCCACAGAGCCATCTTGCCACATCACAT +
Preference number: 5 (lower is better)
Translates to: GRTHCCPGGAQGKGR*SGCCIPQSHLATSH
Trigger: ATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAATGAGTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TTCCTGCAGGCCCCGGTCACTGTCAAAGCCAGCTTCATTGTAGTATaGTTCATTCACCAGGATCAGACCTTGGATGGAGATGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: FLQAPVTVKASFIVV*FIHQDQTLDGDEHL
Trigger: CAGGTGCTCATCTCCATCCAAGGTCTGATCCTGGTGAATGAACCATACTACAATGAAGCTGGCTTTGACAGTGACCGGGGCCTGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp ATAACAGGCAGGTCTGGGCAGGACTGCCATTATCACTGCCATCTTGGACTGGAATTGGTGCCGATGAGCTaGACGGCACAGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: ITGRSGQDCHYHCHLGLELVPMS*TAQSML
Trigger: CAACATTGACTGTGCCGTCAAGCTCATCGGCACCAA...TTCCAGTCCAAGATGGCAGTGATAATGGCAGTCCTGCCCAGACCTGCCTGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 90 bp CTGGGTAGAAGCCATAAGAGTCATCAAAGAAGAGACCCGAGTCGCTaGCGTGAGGGCAGACATCGTAGAGTTTGGCACCATCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LGRSHKSHQRRDPSR*REGRHRRVWHHLLC
Trigger: ACACAGAAGATGGTGCCAAACTCTACGATGTCTGCCCTCACGTCAGCGACTCGGGTCTCTTCTTTGATGACTCTTATGGCTTCTACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp CTTGTCTGGGTCTTCCATGGAATGGTCCCTAGGACACTGGGTATCTaGGGTGCAGGACATGATTCTCACAACTTGCTTCTTCAACAGACG +
Preference number: 5 (lower is better)
Translates to: LVWVFHGMVPRTLGI*GAGHDSHNLLLQQT
Trigger: CGTCTGTTGAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGACCCAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp TCCCCTTTCTTGTCTGGGTCTTCCATGGAATGGTCCCTAGGACACTaGGTATCTGGGGTGCAGGACATGATTCTCACAACTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SPFLSGSSMEWSLGH*VSGVQDMILTTCFF
Trigger: GAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGACCCAGACAAGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 90 bp ATCTCCTTCCGCACTGTGCTGAAGAACTTCTTGGCTTCCGGGGGCTaGAACTCAATCTTCTTGAAAGAGTGGTTTGAGGGTGCAAACTCC +
Preference number: 5 (lower is better)
Translates to: ISFRTVLKNFLASGG*NSIFLKEWFEGANS
Trigger: GGAGTTTGCACCCTCAAACCACTCTTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp TGTCACCTCAGTGGGGATAAAATGAGGCTGGATGGAGCAGATAACAGGCAGGTCATGATGGTTTTCGAGTaGTCAGCCCACACCACTTCC +
Preference number: 5 (lower is better)
Translates to: CHLSGDKMRLDGADNRQVMMVFE*SAHTTS
Trigger: GGAAGTGGTGTGGGCTGACAACTCGAAAACCATCAT...GACCTGCCTGTTATCTGCTCCATCCAGCCTCATTTTATCCCCACTGAGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp AGGCATCCTCTCTACCTGGAGCTTCACATTATCAAAAGCTTAGAAACTTGTAAATCCTTCACATGCTGCTaGACGCCCTCCGGGTACCAC +
Preference number: 5 (lower is better)
Translates to: RHPLYLELHIIKSLETCKSFTCC*TPSGYH
Trigger: GTGGTACCCGGAGGGCGTCAAGCAGCATGTGAAGGA...TTTACAAGTTTCTAAGCTTTTGATAATGTGAAGCTCCAGGTAGAGAGGATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp TATCCTCTCTTAGAGAGTAAGTTCAATAGGCCTAAGGGCTATAACGCACTGGCATCCTCCAGTTTCAGCTaGGTCTCCTTCACATGCTGC +
Preference number: 5 (lower is better)
Translates to: YPLLESKFNRPKGYNALASSSFS*VSFTCC
Trigger: GCAGCATGTGAAGGAGACCAAGCTGAAACTGGAGGA...TGCCAGTGCGTTATAGCCCTTAGGCCTATTGAACTTACTCTCTAAGAGAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp AGGCATCCTCTCTACCTGGAGCTTCACATTATCAAAAGCTTAGAAACTTGTAAACACCAGGATCAGACCTaGGATGGAGATGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: RHPLYLELHIIKSLETCKHQDQT*DGDEHL
Trigger: CAGGTGCTCATCTCCATCCAAGGTCTGATCCTGGTG...TTTACAAGTTTCTAAGCTTTTGATAATGTGAAGCTCCAGGTAGAGAGGATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS-3UTR CAA 90 bp TTTTCAACCTTAAATATTACATACACCAGAAACGACAAGAGCTGTAATGTGCTCCACACCACTTCCACTTaGCTGCTGACATCCACTCGG +
Preference number: 5 (lower is better)
Translates to: FSTLNITYTRNDKSCNVLHTTST*LLTSTR
Trigger: CCGAGTGGATGTCAGCAGCAAAGTGGAAGTGGTGTG...GAGCACATTACAGCTCTTGTCGTTTCTGGTGTATGTAATATTTAAGGTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp AGCCCTGCCACGGGGGCAGCCATGGCCACGGCGCCCTaGATGGCAGCCGTGGCCGCCTCCTCACTGATGACC +
Preference number: 6 (lower is better)
Translates to: SPATGAAMATAP*MAAVAASSLMT
Trigger: GGTCATCAGTGAGGAGGCGGCCACGGCTGCCATCCAGGGCGCCGTGGCCATGGCTGCCCCCGTGGCAGGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp ATGACCACGCCCTTGTCCTCCTCGGGGGCAGTGGGCTaGTCGGCAGGCAAGATGGCGGCCAGCTCCTCTATC +
Preference number: 6 (lower is better)
Translates to: MTTPLSSSGAVG*SAGKMAASSSI
Trigger: GATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCCCACTGCCCCCGAGGAGGACAAGGGCGTGGTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CCTCCTCGGGGGCAGTGGGCTGCTCGGCAGGCAAGATaGCGGCCAGCTCCTCTATCTTGGGGTGCTCATCGT +
Preference number: 6 (lower is better)
Translates to: PPRGQWAARQAR*RPAPLSWGAHR
Trigger: ACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCCCACTGCCCCCGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GCAGTGGGCTGCTCGGCAGGCAAGATGGCGGCCAGCTCCTCTATCTaGGGGTGCTCATCGTCCACGAGCCCGTTGTCGGTCTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: AVGCSAGKMAASSSI*GCSSSTSPLSVSQL
Trigger: CAGCTGGGAGACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCAGCCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp CTGGTGAAGGTGACGCCAGGCCTGCCACCGCACTGCTaGCAGAGCACAGGTGTCTCACTGGGCCACTCGGCT +
Preference number: 6 (lower is better)
Translates to: LVKVTPGLPPHC*QSTGVSLGHSA
Trigger: AGCCGAGTGGCCCAGTGAGACACCTGTGCTCTGTCAGCAGTGCGGTGGCAGGCCTGGCGTCACCTTCACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp CATCAGGGGCTGTCTCAGTCTGCTCTGTGTGGTCTCTaGTGGCTGAGGCAGGGCCCTGGGCTCCACCCTCTG +
Preference number: 6 (lower is better)
Translates to: HQGLSQSALCGL*WLRQGPGLHPL
Trigger: CAGAGGGTGGAGCCCAGGGCCCTGCCTCAGCCAGCAGAGACCACACAGAGCAGACTGAGACAGCCCCTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp GAGGGTGCAAACTCCAGCACAGAGAAGACCTCGCCCTaGGCGCTGGTGAAGGTGACGCCAGGCCTGCCACCG +
Preference number: 6 (lower is better)
Translates to: EGANSSTEKTSP*ALVKVTPGLPP
Trigger: CGGTGGCAGGCCTGGCGTCACCTTCACCAGCGCCAAGGGCGAGGTCTTCTCTGTGCTGGAGTTTGCACCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp GCAGGCAAGATGGCGGCCAGCTCCTCTATCTTGGGGTaGTCATCGTCCACGAGCCCGTTGTCGGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: AGKMAASSSILG*SSSTSPLSVSQ
Trigger: CTGGGAGACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CTCGGGCCACCTGGCCCACTGAGGGCTCATCCTCCTTaGGTAGAGCCCCATCCTCCGTGTTACCAATGCGGA +
Preference number: 6 (lower is better)
Translates to: LGPPGPLRAHPP*VEPHPPCYQCG
Trigger: TCCGCATTGGTAACACGGAGGATGGGGCTCTACCCAAGGAGGATGAGCCCTCAGTGGGCCAGGTGGCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CGCTGTCGTCCTCCCACTCATCCGAGGAGGCCCCACTaGAGCTGCCTTCCACGGAGTCGTAGTCAGACTCCT +
Preference number: 6 (lower is better)
Translates to: RCRPPTHPRRPH*SCLPRSRSQTP
Trigger: AGGAGTCTGACTACGACTCCGTGGAAGGCAGCTCCAGTGGGGCCTCCTCGGATGAGTGGGAGGACGACAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TGCTCGGCAGGCAAGATGGCGGCCAGCTCCTCTATCTaGGGGTGCTCATCGTCCACGAGCCCGTTGTCGGTC +
Preference number: 6 (lower is better)
Translates to: CSAGKMAASSSI*GCSSSTSPLSV
Trigger: GACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGAGCTGGCCGCCATCTTGCCTGCCGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GCTGCAGCCATGGGCTCCAGAGAGCTGCTGTCTTTAAGGGCCCCATaGGGCATCACCTGGGCCCTCTCCTGCATGGCATGGGTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: AAAMGSRELLSLRAP*GITWALSCMAWVSS
Trigger: GCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAAAGACAGCAGCTCTCTGGAGCCCATGGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TCCACGGTGGGCGAGGTGGGCGAGCCTGTGAGCAGCTaGTCCACAGTCATGTTCTTGAGGCTCTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: STVGEVGEPVSS*STVMFLRLSRI
Trigger: GATCCTGGAGAGCCTCAAGAACATGACTGTGGAGCAGCTGCTCACAGGCTCGCCCACCTCGCCCACCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp GGTGTCTCACTGGGCCACTCGGCTTTCACTGGGGACTaGACCTCAGGCTTCTCCTCCTTGCGCTCTGTGTCG +
Preference number: 6 (lower is better)
Translates to: GVSLGHSAFTGD*TSGFSSLRSVS
Trigger: CGACACAGAGCGCAAGGAGGAGAAGCCTGAGGTGCAGTCCCCAGTGAAAGCCGAGTGGCCCAGTGAGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TCCTCTATCTTGGGGTGCTCATCGTCCACGAGCCCGTaGTCGGTCTCCCAGCTGTCGCTGTCGTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SSILGCSSSTSP*SVSQLSLSSSH
Trigger: GTGGGAGGACGACAGCGACAGCTGGGAGACCGACAACGGGCTCGTGGACGATGAGCACCCCAAGATAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp AGGCTCTCCAGGATCTTGATGGCCTCCTTCAGCTCCCGGAAACTCTaGGGAGGCCCGTCCTTCCCAGCTTTCTCCATCAGCCCTGCCACG +
Preference number: 6 (lower is better)
Translates to: RLSRILMASFSSRKL*GGPSFPAFSISPAT
Trigger: CGTGGCAGGGCTGATGGAGAAAGCTGGGAAGGACGGGCCTCCCAAGAGTTTCCGGGAGCTGAAGGAGGCCATCAAGATCCTGGAGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp CCTCCAGTTTCAGCTTGGTCTCCTTCACATGCTGCTTaGCGCCCTCCGGGTACCACTGGACGCGCACGTAGC +
Preference number: 6 (lower is better)
Translates to: PPVSAWSPSHAA*RPPGTTGRARS
Trigger: GCTACGTGCGCGTCCAGTGGTACCCGGAGGGCGTCAAGCAGCATGTGAAGGAGACCAAGCTGAAACTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TCCTGCATCTCCACGGGGCTGGCTGATCCATCAGGTTaGTCCTCCGGGCTAGCAGACCCTATTTCACTCCCG +
Preference number: 6 (lower is better)
Translates to: SCISTGLADPSG*SSGLADPISLP
Trigger: CGGGAGTGAAATAGGGTCTGCTAGCCCGGAGGAGCAACCTGATGGATCAGCCAGCCCCGTGGAGATGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TCAGCCGCCTCATCATCTGCGTCCTGCTCTGCCGAGTaGAGCCCGTCATCTCCACCCTCCTTCAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SAASSSASCSAE*SPSSPPSFKRK
Trigger: CTTCCTCTTGAAGGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TCATCTGTATCGTCAGCCGCCTCATCATCTGCGTCCTaGTCTGCCGAGTGCAGCCCGTCATCTCCACCCTCC +
Preference number: 6 (lower is better)
Translates to: SSVSSAASSSAS*SAECSPSSPPS
Trigger: GGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp GCTGGTGTCATCTGTATCGTCAGCCGCCTCATCATCTaGGTCCTGCTCTGCCGAGTGCAGCCCGTCATCTCC +
Preference number: 6 (lower is better)
Translates to: AGVICIVSRLII*VLLCRVQPVIS
Trigger: GGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACAGATGACACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp GAGCTGCTGTCTTTAAGGGCCCCATTGGGCATCACCTaGGCCCTCTCCTGCATGGCATGGGTTTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: ELLSLRAPLGIT*ALSCMAWVSSQ
Trigger: CTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAAAGACAGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp AGGCAGGAAGCTGCGGTAGCTCTTCCTCCTCCTCTTTaGTCTAACGCTGGGAGGTGCGGATGCATCAGGGGC +
Preference number: 6 (lower is better)
Translates to: RQEAAVALPPPL*SNAGRCGCIRG
Trigger: GCCCCTGATGCATCCGCACCTCCCAGCGTTAGACCAAAGAGGAGGAGGAAGAGCTACCGCAGCTTCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GGCGAGGTGGGCGAGCCTGTGAGCAGCTGCTCCACAGTCATGTTCTaGAGGCTCTCCAGGATCTTGATGGCCTCCTTCAGCTCCCGGAAA +
Preference number: 6 (lower is better)
Translates to: GEVGEPVSSCSTVMF*RLSRILMASFSSRK
Trigger: TTTCCGGGAGCTGAAGGAGGCCATCAAGATCCTGGAGAGCCTCAAGAACATGACTGTGGAGCAGCTGCTCACAGGCTCGCCCACCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TGTATCGTCAGCCGCCTCATCATCTGCGTCCTGCTCTaGCGAGTGCAGCCCGTCATCTCCACCCTCCTTCAA +
Preference number: 6 (lower is better)
Translates to: CIVSRLIICVLL*RVQPVISTLLQ
Trigger: TTGAAGGAGGGTGGAGATGACGGGCTGCACTCGGCAGAGCAGGACGCAGATGATGAGGCGGCTGACGATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TTAAGGGCCCCATTGGGCATCACCTGGGCCCTCTCCTaGATGGCATGGGTTTCCAGCCAGGACTCAATTCGG +
Preference number: 6 (lower is better)
Translates to: LRAPLGITWALS*MAWVSSQDSIR
Trigger: CCGAATTGAGTCCTGGCTGGAAACCCATGCCATGCAGGAGAGGGCCCAGGTGATGCCCAATGGGGCCCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp CCTCCTCCTCTTTGGTCTAACGCTGGGAGGTGCGGATaGATCAGGGGCTGTCTCAGTCTGCTCTGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: PPPLWSNAGRCG*IRGCLSLLCVV
Trigger: GACCACACAGAGCAGACTGAGACAGCCCCTGATGCATCCGCACCTCCCAGCGTTAGACCAAAGAGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp ATCCCCAGACTGCACCACACCATAGACAGCAGGGTCTaGGCAGCTCTGGACTCGCTTGTCCACCACGAAGTC +
Preference number: 6 (lower is better)
Translates to: IPRLHHTIDSRV*AALDSLVHHEV
Trigger: GACTTCGTGGTGGACAAGCGAGTCCAGAGCTGCCCAGACCCTGCTGTCTATGGTGTGGTGCAGTCTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp TCCTCCACCACCACACGGAACTTGCTCTTGGTGCTGAGTACAGGCTaGACCCCAGAGAGCCACTGGACACTGGAGAAGATCTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SSTTTRNLLLVLSTG*TPESHWTLEKILAG
Trigger: CCCAGCCAAGATCTTCTCCAGTGTCCAGTGGCTCTCTGGGGTCAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGTGGTGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp GGGAAGACATACAGACAGCGTTCCCCAAGCTGCCGCTaGGCATGGTCAAAGCATCCGAGACGCTTCACCCTG +
Preference number: 6 (lower is better)
Translates to: GKTYRQRSPSCR*AWSKHPRRFTL
Trigger: CAGGGTGAAGCGTCTCGGATGCTTTGACCATGCTCAGCGGCAGCTTGGGGAACGCTGTCTGTATGTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp AGGTGGCCAGCAGAGCCATCTCCTTCCGCACTGTGCTaGAGAACTTCTTGGCTTCCGGGGGCTGGAACTCAA +
Preference number: 6 (lower is better)
Translates to: RWPAEPSPSALC*RTSWLPGAGTQ
Trigger: TTGAGTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGGAGATGGCTCTGCTGGCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp CTTTCACTGGGGACTGCACCTCAGGCTTCTCCTCCTTaGGCTCTGTGTCGGGTACTGCCTCCATCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSLGTAPQASPP*ALCRVLPPSSP
Trigger: AGGAGAAGATGGAGGCAGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTGAGGTGCAGTCCCCAGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp ATTCGGTTCACCAGCCGCCAGCCACCCACACTGAAGTaGTGCCGAATCTCCTGTTCGAAGACCTCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: IRFTSRQPPTLK*CRISCSKTSGG
Trigger: ACCTCCTGAGGTCTTCGAACAGGAGATTCGGCAGCACTTCAGTGTGGGTGGCTGGCGGCTGGTGAACCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp ACATTCCCAGGCAATCTTGGCCGGCTCTACCTTGGCTaGGAAGACATACAGACAGCGTTCCCCAAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: TFPGNLGRLYLG*EDIQTAFPKLP
Trigger: CGGCAGCTTGGGGAACGCTGTCTGTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAAGATTGCCTGGGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp GGGCTAACGCTGTCCGTGCCGCCGGGGCAGAAGCTCTaGGTAATCCACGTGACTTTCAGTTCTACAACCTGC +
Preference number: 6 (lower is better)
Translates to: GLTLSVPPGQKL*VIHVTFSSTTC
Trigger: GCAGGTTGTAGAACTGAAAGTCACGTGGATTACCAAGAGCTTCTGCCCCGGCGGCACGGACAGCGTTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp AGGATCTTGATGGCCTCCTTCAGCTCCCGGAAACTCTaGGGAGGCCCGTCCTTCCCAGCTTTCTCCATCAGC +
Preference number: 6 (lower is better)
Translates to: RILMASFSSRKL*GGPSFPAFSIS
Trigger: GCTGATGGAGAAAGCTGGGAAGGACGGGCCTCCCAAGAGTTTCCGGGAGCTGAAGGAGGCCATCAAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp GGCGAGCCTGTGAGCAGCTGCTCCACAGTCATGTTCTaGAGGCTCTCCAGGATCTTGATGGCCTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GEPVSSCSTVMF*RLSRILMASFS
Trigger: GCTGAAGGAGGCCATCAAGATCCTGGAGAGCCTCAAGAACATGACTGTGGAGCAGCTGCTCACAGGCTCGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp AGTTCTACAACCTGCACCTCCTCCACCACCACACGGAACTTGCTCTaGGTGCTGAGTACAGGCTTGACCCCAGAGAGCCACTGGACACTG +
Preference number: 6 (lower is better)
Translates to: SSTTCTSSTTTRNLL*VLSTGLTPESHWTL
Trigger: CAGTGTCCAGTGGCTCTCTGGGGTCAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGTGGTGGTGGAGGAGGTGCAGGTTGTAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp ACTCAATTCGGTTCACCAGCCGCCAGCCACCCACACTaGAGTGCTGCCGAATCTCCTGTTCGAAGACCTCAG +
Preference number: 6 (lower is better)
Translates to: TQFGSPAASHPH*SAAESPVRRPQ
Trigger: CTGAGGTCTTCGAACAGGAGATTCGGCAGCACTTCAGTGTGGGTGGCTGGCGGCTGGTGAACCGAATTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp CTCAGGCTTCTCCTCCTTGCGCTCTGTGTCGGGTACTaGCTCCATCTTCTCCTCCTCAGCAATGGCCACATT +
Preference number: 6 (lower is better)
Translates to: LRLLLLALCVGY*LHLLLLSNGHI
Trigger: AATGTGGCCATTGCTGAGGAGGAGAAGATGGAGGCAGTACCCGACACAGAGCGCAAGGAGGAGAAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CTGGACATTCCCAGGCAATCTTGGCCGGCTCTACCTTaGCTGGGAAGACATACAGACAGCGTTCCCCAAGCT +
Preference number: 6 (lower is better)
Translates to: LDIPRQSWPALP*LGRHTDSVPQA
Trigger: AGCTTGGGGAACGCTGTCTGTATGTCTTCCCAGCCAAGGTAGAGCCGGCCAAGATTGCCTGGGAATGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CTGGCTTCCCCTTTCTTGTCTGGGTCTTCCATGGAATaGTCCCTAGGACACTGGGTATCTGGGGTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: LASPFLSGSSME*SLGHWVSGVQD
Trigger: GTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGACCCAGACAAGAAAGGGGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TCTACAACCTGCACCTCCTCCACCACCACACGGAACTaGCTCTTGGTGCTGAGTACAGGCTTGACCCCAGAG +
Preference number: 6 (lower is better)
Translates to: STTCTSSTTTRN*LLVLSTGLTPE
Trigger: CTCTGGGGTCAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGTGGTGGTGGAGGAGGTGCAGGTTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp ACTTTCAGTTCTACAACCTGCACCTCCTCCACCACCACACGGAACTaGCTCTTGGTGCTGAGTACAGGCTTGACCCCAGAGAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: TFSSTTCTSSTTTRN*LLVLSTGLTPESHW
Trigger: CCAGTGGCTCTCTGGGGTCAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGTGGTGGTGGAGGAGGTGCAGGTTGTAGAACTGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp CCCTTGATCAGTGCAGAGAAGAGGTCCATTCTGTCCTCAAAAGTCTaGACCATGATGCCATCGGGCAGCGAGGTGGCCAGCAGAGCCATC +
Preference number: 6 (lower is better)
Translates to: PLISAEKRSILSSKV*TMMPSGSEVASRAI
Trigger: GATGGCTCTGCTGGCCACCTCGCTGCCCGATGGCATCATGGTCAAGACTTTTGAGGACAGAATGGACCTCTTCTCTGCACTGATCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp AGAGGCCGTCTTCATAGGGAGTCCGAGTGGGGCCCTTaGTCAGTGCAGAGAAGAGGTCCATTCTGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: RGRLHRESEWGP*SVQRRGPFCPQ
Trigger: TTGAGGACAGAATGGACCTCTTCTCTGCACTGATCAAGGGCCCCACTCGGACTCCCTATGAAGACGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp ACGAAGTCCCCAGGGCAGAACTCATTGTTGTCCAGGTaGTGCACAGGGAAAAGGTCGTTGGAGCGGATGTTG +
Preference number: 6 (lower is better)
Translates to: TKSPGQNSLLSR*CTGKRSLERML
Trigger: CAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAATGAGTTCTGCCCTGGGGACTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CTCCTCTTCTCCAATGAGCTCCACGTCATCCCCACTTaGTCGCAGCTTGAACCACTTCACCATGCAGGTACG +
Preference number: 6 (lower is better)
Translates to: LLFSNELHVIPT*SQLEPLHHAGT
Trigger: CGTACCTGCATGGTGAAGTGGTTCAAGCTGCGACCAAGTGGGGATGACGTGGAGCTCATTGGAGAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CTTCTTGATATCGTCCAAAAACTTCTTCTCTCGGGTTaGCTTCTCAGGCTCCACGGTGGGCGAGGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: LLDIVQKLLLSG*LLRLHGGRGGR
Trigger: TCGCCCACCTCGCCCACCGTGGAGCCTGAGAAGCCAACCCGAGAGAAGAAGTTTTTGGACGATATCAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CGAAGACCTCAGGAGGTCGTCGCACCAACTGGGTCATaGACTGCACCACACGGATTAATGCCATCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: RRPQEVVAPTGS*TAPHGLMPSRC
Trigger: ACAACGAGATGGCATTAATCCGTGTGGTGCAGTCCATGACCCAGTTGGTGCGACGACCTCCTGAGGTCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp TCCTGTTCGAAGACCTCAGGAGGTCGTCGCACCAACTaGGTCATGGACTGCACCACACGGATTAATGCCATC +
Preference number: 6 (lower is better)
Translates to: SCSKTSGGRRTN*VMDCTTRINAI
Trigger: GATGGCATTAATCCGTGTGGTGCAGTCCATGACCCAGTTGGTGCGACGACCTCCTGAGGTCTTCGAACAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp ACCACACGGAACTTGCTCTTGGTGCTGAGTACAGGCTaGACCCCAGAGAGCCACTGGACACTGGAGAAGATC +
Preference number: 6 (lower is better)
Translates to: TTRNLLLVLSTG*TPESHWTLEKI
Trigger: GATCTTCTCCAGTGTCCAGTGGCTCTCTGGGGTCAAGCCTGTACTCAGCACCAAGAGCAAGTTCCGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp AGTGCAGAGAAGAGGTCCATTCTGTCCTCAAAAGTCTaGACCATGATGCCATCGGGCAGCGAGGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SAEKRSILSSKV*TMMPSGSEVAS
Trigger: GCTGGCCACCTCGCTGCCCGATGGCATCATGGTCAAGACTTTTGAGGACAGAATGGACCTCTTCTCTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp ATCCAGGTACCTAGGAGGCTGACACACACTTTCCCATaGTCATACAGGTTGGGGTTCAGGCGGCCACTGCAC +
Preference number: 6 (lower is better)
Translates to: IQVPRRLTHTFP*SYRLGFRRPLH
Trigger: GTGCAGTGGCCGCCTGAACCCCAACCTGTATGACAATGGGAAAGTGTGTGTCAGCCTCCTAGGTACCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp TGGGTAGAGCCCCATCCTCCGTGTTACCAATGCGGATaGCAATGTCAGTTGTGCGGAAGCGAAAGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: WVEPHPPCYQCG*QCQLCGSESQG
Trigger: ACCCTGACTTTCGCTTCCGCACAACTGACATTGTCATCCGCATTGGTAACACGGAGGATGGGGCTCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TGCTCCACAGTCATGTTCTTGAGGCTCTCCAGGATCTaGATGGCCTCCTTCAGCTCCCGGAAACTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: CSTVMFLRLSRI*MASFSSRKLLG
Trigger: TCCCAAGAGTTTCCGGGAGCTGAAGGAGGCCATCAAGATCCTGGAGAGCCTCAAGAACATGACTGTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp TTGTTGTCCAGGTGGTGCACAGGGAAAAGGTCGTTGGAGCGGATGTaGCATTCCACAGAGCCATCTTGCCACATCACATCAGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LLSRWCTGKRSLERM*HSTEPSCHITSAEV
Trigger: GACCTCAGCTGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GGGCAGAACTCATTGTTGTCCAGGTGGTGCACAGGGAAAAGGTCGTaGGAGCGGATGTTGCATTCCACAGAGCCATCTTGCCACATCACA +
Preference number: 6 (lower is better)
Translates to: GQNSLLSRWCTGKRS*ERMLHSTEPSCHIT
Trigger: TGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAATGAGTTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GTGGCCAGCAGAGCCATCTCCTTCCGCACTGTGCTGAAGAACTTCTaGGCTTCCGGGGGCTGGAACTCAATCTTCTTGAAAGAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: VASRAISFRTVLKNF*ASGGWNSIFLKEWF
Trigger: AAACCACTCTTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGGAGATGGCTCTGCTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TCGTTGGAGCGGATGTTGCATTCCACAGAGCCATCTTaGCACATCACATCAGCTGAGGTCATCGTGGTCACA +
Preference number: 6 (lower is better)
Translates to: SLERMLHSTEPS*HITSAEVIVVT
Trigger: TGTGACCACGATGACCTCAGCTGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp GCACAGTCAATGTTGACATCTATCACCGTGCCACACTaGCTGTCAGTTGAGCGCATGTGTCGAACCACATCC +
Preference number: 6 (lower is better)
Translates to: AQSMLTSITVPH*LSVERMCRTTS
Trigger: GGATGTGGTTCGACACATGCGCTCAACTGACAGCCAGTGTGGCACGGTGATAGATGTCAACATTGACTGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp CAGTTGGTGCCGATGAGCTTGACGGCACAGTCAATGTaGACATCTATCACCGTGCCACACTGGCTGTCAGTT +
Preference number: 6 (lower is better)
Translates to: QLVPMSLTAQSM*TSITVPHWLSV
Trigger: AACTGACAGCCAGTGTGGCACGGTGATAGATGTCAACATTGACTGTGCCGTCAAGCTCATCGGCACCAACTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp AGGTGGTGCACAGGGAAAAGGTCGTTGGAGCGGATGTaGCATTCCACAGAGCCATCTTGCCACATCACATCA +
Preference number: 6 (lower is better)
Translates to: RWCTGKRSLERM*HSTEPSCHITS
Trigger: TGATGTGATGTGGCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TCATTGTTGTCCAGGTGGTGCACAGGGAAAAGGTCGTaGGAGCGGATGTTGCATTCCACAGAGCCATCTTGC +
Preference number: 6 (lower is better)
Translates to: SLLSRWCTGKRS*ERMLHSTEPSC
Trigger: GCAAGATGGCTCTGTGGAATGCAACATCCGCTCCAACGACCTTTTCCCTGTGCACCACCTGGACAACAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp ACTGCCTCCATCTTCTCCTCCTCAGCAATGGCCACATaGTCCAGGGTCTTCTTGAGGTTCTCCTGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: TASIFSSSAMAT*SRVFLRFSCSF
Trigger: GAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCATTGCTGAGGAGGAGAAGATGGAGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp CCTAGGACACTGGGTATCTGGGGTGCAGGACATGATTCTCACAACTaGCTTCTTCAACAGACGCTTCACCTTCTTGGCCATAGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PRTLGIWGAGHDSHN*LLQQTLHLLGHRAL
Trigger: GAGGGCTCTATGGCCAAGAAGGTGAAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GTGTCGGGTACTGCCTCCATCTTCTCCTCCTCAGCAATGGCCACATaGTCCAGGGTCTTCTTGAGGTTCTCCTGTAGCTTCTTGATATCG +
Preference number: 6 (lower is better)
Translates to: VSGTASIFSSSAMAT*SRVFLRFSCSFLIS
Trigger: CGATATCAAGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCATTGCTGAGGAGGAGAAGATGGAGGCAGTACCCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp GACTCGATGTTGTATAAGTGCTGTGGCAGGATGATGGTTTTCGAGTaGTCAGCCCACACCACTTCCACTTTGCTGCTGACATCCACTCGG +
Preference number: 6 (lower is better)
Translates to: DSMLYKCCGRMMVFE*SAHTTSTLLLTSTR
Trigger: CCGAGTGGATGTCAGCAGCAAAGTGGAAGTGGTGTGGGCTGACAACTCGAAAACCATCATCCTGCCACAGCACTTATACAACATCGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp AGCCATAAGAGTCATCAAAGAAGAGACCCGAGTCGCTaGCGTGAGGGCAGACATCGTAGAGTTTGGCACCAT +
Preference number: 6 (lower is better)
Translates to: SHKSHQRRDPSR*REGRHRRVWHH
Trigger: ATGGTGCCAAACTCTACGATGTCTGCCCTCACGTCAGCGACTCGGGTCTCTTCTTTGATGACTCTTATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp TCTCTGTCCCCTTTCCAATCCAGGTACCTAGGAGGCTaGCACACACTTTCCCATTGTCATACAGGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: SLSPFQSRYLGG*HTLSHCHTGWG
Trigger: ACCCCAACCTGTATGACAATGGGAAAGTGTGTGTCAGCCTCCTAGGTACCTGGATTGGAAAGGGGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp GTCTTCATAGGGAGTCCGAGTGGGGCCCTTGATCAGTaGAGAGAAGAGGTCCATTCTGTCCTCAAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: VFIGSPSGALDQ*REEVHSVLKSL
Trigger: AAGACTTTTGAGGACAGAATGGACCTCTTCTCTGCACTGATCAAGGGCCCCACTCGGACTCCCTATGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp TTGTCTGGGTCTTCCATGGAATGGTCCCTAGGACACTaGGTATCTGGGGTGCAGGACATGATTCTCACAACT +
Preference number: 6 (lower is better)
Translates to: LSGSSMEWSLGH*VSGVQDMILTT
Trigger: AGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGACCCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp CGCACTGTGCTGAAGAACTTCTTGGCTTCCGGGGGCTaGAACTCAATCTTCTTGAAAGAGTGGTTTGAGGGT +
Preference number: 6 (lower is better)
Translates to: RTVLKNFLASGG*NSIFLKEWFEG
Trigger: ACCCTCAAACCACTCTTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCACAGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp AGAGCCATCTCCTTCCGCACTGTGCTGAAGAACTTCTaGGCTTCCGGGGGCTGGAACTCAATCTTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: RAISFRTVLKNF*ASGGWNSIFLK
Trigger: TTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAAGAAGTTCTTCAGCACAGTGCGGAAGGAGATGGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp GGAGAAGATCTTGGCTGGGCCAATAAGGACTTGGCCTaGGTAGAAGCCATAAGAGTCATCAAAGAAGAGACC +
Preference number: 6 (lower is better)
Translates to: GEDLGWANKDLA*VEAIRVIKEET
Trigger: GGTCTCTTCTTTGATGACTCTTATGGCTTCTACCCAGGCCAAGTCCTTATTGGCCCAGCCAAGATCTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp GTCTTCCATGGAATGGTCCCTAGGACACTGGGTATCTaGGGTGCAGGACATGATTCTCACAACTTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: VFHGMVPRTLGI*GAGHDSHNLLL
Trigger: AAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAGTGTCCTAGGGACCATTCCATGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CCA 72 bp GCCCCGGTCACTGTCAAAGCCAGCTTCATTGTAGTATaGTTCATTCACCAGGATCAGACCTTGGATGGAGAT +
Preference number: 6 (lower is better)
Translates to: APVTVKASFIVV*FIHQDQTLDGD
Trigger: ATCTCCATCCAAGGTCTGATCCTGGTGAATGAACCATACTACAATGAAGCTGGCTTTGACAGTGACCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp CTGGGTATCTGGGGTGCAGGACATGATTCTCACAACTaGCTTCTTCAACAGACGCTTCACCTTCTTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LGIWGAGHDSHN*LLQQTLHLLGH
Trigger: ATGGCCAAGAAGGTGAAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp AACTTCTTGGCTTCCGGGGGCTGGAACTCAATCTTCTaGAAAGAGTGGTTTGAGGGTGCAAACTCCAGCACA +
Preference number: 6 (lower is better)
Translates to: NFLASGGWNSIF*KEWFEGANSST
Trigger: TGTGCTGGAGTTTGCACCCTCAAACCACTCTTTCAAGAAGATTGAGTTCCAGCCCCCGGAAGCCAAGAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp ATGGCCACATTGTCCAGGGTCTTCTTGAGGTTCTCCTGTAGCTTCTaGATATCGTCCAAAAACTTCTTCTCTCGGGTTGGCTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: MATLSRVFLRFSCSF*ISSKNFFSRVGFSG
Trigger: GCCTGAGAAGCCAACCCGAGAGAAGAAGTTTTTGGACGATATCAAGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS TCA 72 bp TCTCAGACTCGATGTTGTATAAGTGCTGTGGCAGGATaGTGGTTTTCGAGTTGTCAGCCCACACCACTTCCA +
Preference number: 6 (lower is better)
Translates to: SQTRCCISAVAG*WFSSCQPTPLP
Trigger: TGGAAGTGGTGTGGGCTGACAACTCGAAAACCATCATCCTGCCACAGCACTTATACAACATCGAGTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS GCA 72 bp TGGGTATCTGGGGTGCAGGACATGATTCTCACAACTTaGTTCTTCAACAGACGCTTCACCTTCTTGGCCATA +
Preference number: 6 (lower is better)
Translates to: WVSGVQDMILTT*FFNRRFTFLAI
Trigger: TATGGCCAAGAAGGTGAAGCGTCTGTTGAAGAAGCAAGTTGTGAGAATCATGTCCTGCACCCCAGATACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TTGTATAAGTGCTGTGGCAGGATGATGGTTTTCGAGTaGTCAGCCCACACCACTTCCACTTTGCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: LYKCCGRMMVFE*SAHTTSTLLLT
Trigger: TGTCAGCAGCAAAGTGGAAGTGGTGTGGGCTGACAACTCGAAAACCATCATCCTGCCACAGCACTTATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TCCTCCTCAGCAATGGCCACATTGTCCAGGGTCTTCTaGAGGTTCTCCTGTAGCTTCTTGATATCGTCCAAA +
Preference number: 6 (lower is better)
Translates to: SSSAMATLSRVF*RFSCSFLISSK
Trigger: TTTGGACGATATCAAGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCATTGCTGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 90 bp TCCATCTTCTCCTCCTCAGCAATGGCCACATTGTCCAGGGTCTTCTaGAGGTTCTCCTGTAGCTTCTTGATATCGTCCAAAAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: SIFSSSAMATLSRVF*RFSCSFLISSKNFF
Trigger: GAAGAAGTTTTTGGACGATATCAAGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAATGTGGCCATTGCTGAGGAGGAGAAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5
CDS CAA 72 bp TTGTCCAGGGTCTTCTTGAGGTTCTCCTGTAGCTTCTaGATATCGTCCAAAAACTTCTTCTCTCGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: LSRVFLRFSCSF*ISSKNFFSRVG
Trigger: GCCAACCCGAGAGAAGAAGTTTTTGGACGATATCAAGAAGCTACAGGAGAACCTCAAGAAGACCCTGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082152.5